Cp4.1LG01g01620 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g01620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Subtilisin-like protease 3
Location	Cp4.1LG01 : 2900952 .. 2901242 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAGGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAATATCAGAGGAGTAA

mRNA sequence

ATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAGGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAATATCAGAGGAGTAA

Coding sequence (CDS)

ATGGCTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCAGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACACTTGCCTACTTCCTCTGGGTCAAGCCCTCCCAGGACCTCAAACGCGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATATGGCAACAAGAATAAACCTAAAATATCAGAGGAGTAA

Protein sequence

MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALAATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE

Homology

[Close]

BLAST of Cp4.1LG01g01620 vs. TrEMBL
Match: A0A067KP46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08029 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-42
Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 1


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S+WRRT+GNVRSFIGNSMGGLRGG+NLASWVVAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MSSNWRRTLGNVRSFIGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPK 93
          AA DPYRY+EKRKPIPDPQETGLIYGNKNK K
Sbjct: 61 AAADPYRYVEKRKPIPDPQETGLIYGNKNKTK 92

[Close]

BLAST of Cp4.1LG01g01620 vs. TrEMBL
Match: A0A0A0KZ01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089280 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.7e-41
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 1


Query: 2  ASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
          +SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62

Query: 62 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          A DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

[Close]

BLAST of Cp4.1LG01g01620 vs. TrEMBL
Match: V4TG86_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002952mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-41
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          MASSWRRT+GN+RSF+GNSMGG+RGG NLASWVVAGTLAY+LWVKPSQDLKREQ+ERAAL
Sbjct: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          AA DP RY+EKRKPIPDPQETGLIYGNKN+ + SEE
Sbjct: 61 AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. TrEMBL
Match: A0A067H099_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034394mg PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.8e-41
Identity = 82/96 (85.42%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          MASSWRRT+GN+RSF+GNSMGG+RGG NLASWVVAGTLAY+LWVKPSQDLKREQ+ERAAL
Sbjct: 1  MASSWRRTIGNLRSFVGNSMGGVRGGANLASWVVAGTLAYYLWVKPSQDLKREQEERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          AA DP RY+EKRKPIPDPQETGLIYGNKN+ + SEE
Sbjct: 61 AALDPNRYVEKRKPIPDPQETGLIYGNKNRSRKSEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. TrEMBL
Match: B9H5W7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27840g PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.4e-40
Identity = 79/96 (82.29%), Postives = 91/96 (94.79%), Query Frame = 1


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S WRRTVGNVRSFIGNS+GGLRGG+N+ASW+VAGTLAY+LW+KPSQDLKR+Q+ERAAL
Sbjct: 1  MSSGWRRTVGNVRSFIGNSLGGLRGGSNVASWIVAGTLAYYLWIKPSQDLKRQQEERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          A++DPYRYIEKRKPIPDPQETGLIYG KN+   SEE
Sbjct: 61 ASSDPYRYIEKRKPIPDPQETGLIYGKKNRTNKSEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. TAIR10
Match: AT2G33585.1 (AT2G33585.1 unknown protein)

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-37
Identity = 72/96 (75.00%), Postives = 82/96 (85.42%), Query Frame = 1


Query: 1   MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
           MASSWRR++GNVRSFIGNSMGGLRGG + ASWVVAGT+AYFLW+KP QDLK+EQ+ RAAL
Sbjct: 98  MASSWRRSIGNVRSFIGNSMGGLRGGQSAASWVVAGTIAYFLWIKPEQDLKKEQEARAAL 157

Query: 61  AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
           A  D  +Y+EKRKPI DPQ TGLIYGNKN    SE+
Sbjct: 158 AMADTNQYVEKRKPIADPQVTGLIYGNKNGTDKSED 193

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: gi|802604326|ref|XP_012073563.1| (PREDICTED: uncharacterized protein LOC105635169 [Jatropha curcas])

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-42
Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 1


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M+S+WRRT+GNVRSFIGNSMGGLRGG+NLASWVVAGTLAYFLWVKPSQDLKREQQERAAL
Sbjct: 1  MSSNWRRTLGNVRSFIGNSMGGLRGGSNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPK 93
          AA DPYRY+EKRKPIPDPQETGLIYGNKNK K
Sbjct: 61 AAADPYRYVEKRKPIPDPQETGLIYGNKNKTK 92

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: gi|778691658|ref|XP_011653322.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X3 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 8.2e-42
Identity = 85/96 (88.54%), Postives = 90/96 (93.75%), Query Frame = 1


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAAL
Sbjct: 1  MTSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          AA DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 61 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: gi|659101598|ref|XP_008451691.1| (PREDICTED: uncharacterized protein LOC103492913 isoform X3 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 85/96 (88.54%), Postives = 89/96 (92.71%), Query Frame = 1


Query: 1  MASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAAL 60
          M SSWRR+ GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAAL
Sbjct: 1  MTSSWRRSFGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAAL 60

Query: 61 AATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          AA DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 61 AAVDPHRYIEKRKPIPDPQETGLIYGNKNTPQKPEE 96

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: gi|449438867|ref|XP_004137209.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 1


Query: 2  ASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
          +SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 3  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 62

Query: 62 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          A DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 63 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 97

[Close]

BLAST of Cp4.1LG01g01620 vs. NCBI nr
Match: gi|778691650|ref|XP_011653320.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 2.4e-41
Identity = 84/95 (88.42%), Postives = 90/95 (94.74%), Query Frame = 1


Query: 2  ASSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALA 61
          +SSWRR++GNVRSFIGNSMGGLRGG NLASWVVAGTLAY+LWVKPSQDLKREQQERAALA
Sbjct: 4  SSSWRRSLGNVRSFIGNSMGGLRGGANLASWVVAGTLAYYLWVKPSQDLKREQQERAALA 63

Query: 62 ATDPYRYIEKRKPIPDPQETGLIYGNKNKPKISEE 97
          A DP+RYIEKRKPIPDPQETGLIYGNKN P+  EE
Sbjct: 64 AVDPHRYIEKRKPIPDPQETGLIYGNKNTPRKPEE 98

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g01620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KP46_JATCU	1.5e-42	92.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08029 PE=4 SV=1	[more]
A0A0A0KZ01_CUCSA	1.7e-41	88.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089280 PE=4 SV=1	[more]
V4TG86_9ROSI	2.8e-41	85.42	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002952mg PE=4 SV=1	[more]
A0A067H099_CITSI	2.8e-41	85.42	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034394mg PE=4 SV=1	[more]
B9H5W7_POPTR	2.4e-40	82.29	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27840g PE=4 SV=1	[more]

BLAST of Cp4.1LG01g01620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33585.1	2.2e-37	75.00	unknown protein	[more]

BLAST of Cp4.1LG01g01620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|802604326\|ref\|XP_012073563.1\|	2.2e-42	92.39	PREDICTED: uncharacterized protein LOC105635169 [Jatropha curcas]	[more]
gi\|778691658\|ref\|XP_011653322.1\|	8.2e-42	88.54	PREDICTED: uncharacterized protein LOC101205325 isoform X3 [Cucumis sativus]	[more]
gi\|659101598\|ref\|XP_008451691.1\|	1.8e-41	88.54	PREDICTED: uncharacterized protein LOC103492913 isoform X3 [Cucumis melo]	[more]
gi\|449438867\|ref\|XP_004137209.1\|	2.4e-41	88.42	PREDICTED: uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus]	[more]
gi\|778691650\|ref\|XP_011653320.1\|	2.4e-41	88.42	PREDICTED: uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g01620.1	Cp4.1LG01g01620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37213	FAMILY NOT NAMED	coord: 1..96 score: 5.0
None	No IPR available	PANTHER	PTHR37213:SF1	SUBFAMILY NOT NAMED	coord: 1..96 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g01620	Cucsa.273390	Cucumber (Gy14) v1	cgycpeB0717
Cp4.1LG01g01620	CmaCh16G004130	Cucurbita maxima (Rimu)	cmacpeB351
Cp4.1LG01g01620	CmaCh04G005590	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g01620	CmoCh04G005950	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g01620	CmoCh16G004450	Cucurbita moschata (Rifu)	cmocpeB311
Cp4.1LG01g01620	Cla002421	Watermelon (97103) v1	cpewmB410
Cp4.1LG01g01620	Csa4G089280	Cucumber (Chinese Long) v2	cpecuB409
Cp4.1LG01g01620	MELO3C016084	Melon (DHL92) v3.5.1	cpemeB418
Cp4.1LG01g01620	ClCG07G009870	Watermelon (Charleston Gray)	cpewcgB406
Cp4.1LG01g01620	CSPI04G08230	Wild cucumber (PI 183967)	cpecpiB408
Cp4.1LG01g01620	Lsi07G003090	Bottle gourd (USVL1VR-Ls)	cpelsiB380
Cp4.1LG01g01620	MELO3C016084.2	Melon (DHL92) v3.6.1	cpemedB489
Cp4.1LG01g01620	CsaV3_4G008460	Cucumber (Chinese Long) v3	cpecucB0506
Cp4.1LG01g01620	Bhi01G002527	Wax gourd	cpewgoB0513
Cp4.1LG01g01620	CsGy4G008130	Cucumber (Gy14) v2	cgybcpeB512
Cp4.1LG01g01620	Carg11344	Silver-seed gourd	carcpeB0927
Cp4.1LG01g01620	Carg13177	Silver-seed gourd	carcpeB0061

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g01620	Cp4.1LG14g03800	Cucurbita pepo (Zucchini)	cpecpeB234

The following block(s) are covering this gene:

None