CmaCh04G005590 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAATTTATCATCCTGATTTTGATTTTTAACAGCGCCTGCCAGCTACCTCTTAGCTTGATTATTCTTATGAATTTGAGCTTTAGGGTTCTTTCCCATCGGTAATTTAATGAATTTTGTTGATCTTCAATGTTTGATTGGGCCCCGGCCCCTTTTTTGGGTGCGATTGTGGTGATGAAACTCAGTTTTTTGTTCGATTTTTTTCAGGCTTCACTGATATTTGTCCTGCTCCTTCATCGGCTGTAATCGTCTTTGATGCATAGACGCGTTTGATCGCTCAATTTGATAATGACTTCAAGGTACCTGATTTTGGTTTCAGAGTCCTTTTCTTCATCTATGTTTAGGTTTTCTTGCGAATTGGTTTTTTCTTGTTGGATTGGTGTGAACCGTTGAGGATTAGTAGAGAAATTCGTGAATATTTTCGATCTAGATTTTAAGAATGGACTGGTTTTTATTTGAGTCTCACTTAAGGTGTATCTGCTATGATGCTTTGAATCTTTTGTGGTTTTGATTGCTTAGAAATTCCCATATGTGGTGGTTTATTCGCTTGGATGATAGAATTTTGGAATGAATGACAATATGTAACATTTTCTTTATGAAAAGGCAGGTTAATAGAAGAGAAATCTCAGATTTACTGAACAAAATACCTAGACCTAAGTAAAGTTCTGCCTTAGATTTCTTGTTTTGGATCATGATCCCTTATTGATCCTAGTGAGTTATGAATTTGCTTATAGGATCATAGAATACATGGCTGTACAGGGAACGTCTGTGCTATTATATTCTCTGCAGGATTTTGAATGGTTGTCTAAGTTAATGCTTATGCTTAGTTGGTTAGCTTAGAATTTAAAATCAAAGATTAACTCTGGTGTTTCTTAAGTGGCTGGTGGCTACTCGGTATCAGTAGACGTGGGTACCGACATCAGATGAGTACATCTTTCAATTATGGCTTCTTAATCCGATGTCTAATTCAGGCTCTGAGGGGTGTTTAGTAAGAGGAGATGTTTATTTCTTCAAATGGTTTCTGTTTCAAATAAACATAGACAACTGATAGGAATGGTATGGTATTAGGCTGGTTATGGATGTTATTAGAGTGTTTGGGGTGTATTAGTTATTAGTTCGAGGAGTTTGTTAGGAGTCAATTTGGGCGAAGAGAAAGCTCGACCATTGCTTTGATGGTTTTGGCTGAGTGTGTATACTCAAGAGAGGGGAGGGTCCAAACTCCAAGTACCTCAAATACTTGGATTATATTGTAGCTCTTCTATCTATTTTATTTCAATATTGTACTAGTTGACTGGGTTCTATGAACATCAAAGCTACCTATCCTTGCCAGTTTATAGTTTTCTCTCTACCATCTTTGTGAGATTCCACATTGGTTGAGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTCCCTATCAGATGCGTTTTAAAAACCTTGAGGGGAAGTCCGAAAGGAAAAGCCCAAAGAGGGACAATATCTGCTAGCGGTAGGCTTGGACCGTTACAAATTATATGAGAGCCAGACACCGGACGATGTGCCAGCGAGCAGGTAGAGCCCGGAATGGGGGTGGACACGAGGCGGTGTGCCAGCAAGGATGCTAGGCCTTGAAAGAGGGTGGACTAGGGGTCCACATCGATGGGAGAAGGGAACGATTGCCAGCGAAGGCGTTGGGCCCCATCTGGGGGTGGATTGTGAGATGCCACATCAGTTGGGGGAGGAGAACGAAGCATTCTTTAGCATACGCATTTTAAAAACCTTGAGGAGAAGCTCGAAAGGGAAAGCCCAAAGATGACAATATCTACTAACGGTGGGCTTGAGCCGTTACAATCTTGTTCTCTACTTTTTCCACGTTAGTACATTATCTTCTTAATTTGTCCTTAGTTAGTACATCATCTTCTTAATTTGTCCTTAGTTAGTACATCATCTTCTTAATTTGTCCTTGTTTTTCTCGATCTTCTGTCTTATTTTCATCTGTCTAAATCGCTGTCTATAAGTTCATTTTCATTTTGTTTTCTGGTTTGCCGGACTTTCATTATTTATAAAACGTTCTTTTCGGTTTAGCCTTTATATTTGATCTCTACATTCCCATTAAAAATGATACAAGTATTTGCCCATTTATATCTGTCGATTTCTACTGATTTTTGGTATATTTTCCATCGTACATTGAAACATAGTTTGTCTTCTGAATTCTTCCTTGGTTTCTATTTTGTCTGGTTTTTTTCCTTACAATGACTAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCCGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACTCTTGCCTACTTCCTCTGGGTCAAGCCTTCCCAAGACCTCAAACGTGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATACGGCAATAAGAATAAACCTCAAAAATCAGAGGAATAATCATCTATGGAGAGCGAAAACTTTTGAGAAATGTAACGGATTGCCCTTTATACATGGAAGGGGGTCGGTAATGTCGGGGGGAAGCTAGAGCCTGGAACAACATGATTCTCTTATAACGCTATGGATGTGAAGATTAAAAGGTGATAGATAGGGAATGTGTGTAGTTTCAGTAAAGAGTTGTAGCCAAATCATTTGAATGAAATGTTTTAGTGTAATAACCTGGAGCTGAAAGTTGCAAAAGTTCTGTACTTTGTGTTTTGCTCTGATGATCTCAATGGGATTATCTGCCTGCCTGCTTGTATATTTCTAGTGGAGGTGGAGGCCTCAACTTTCATGTGGCACTTAAAAGCAATAAACTAGTTATCAAGTCTTCTAAACGATGTAAGTATATGCCTATTGAAAATCTAATTAGATATCATATTGAACACCA TCAATTTATCATCCTGATTTTGATTTTTAACAGCGCCTGCCAGCTACCTCTTAGCTTGATTATTCTTATGAATTTGAGCTTTAGGGTTCTTTCCCATCGGCTTCACTGATATTTGTCCTGCTCCTTCATCGGCTGTAATCGTCTTTGATGCATAGACGCGTTTGATCGCTCAATTTGATAATGACTTCAAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCCGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACTCTTGCCTACTTCCTCTGGGTCAAGCCTTCCCAAGACCTCAAACGTGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATACGGCAATAAGAATAAACCTCAAAAATCAGAGGAATAATCATCTATGGAGAGCGAAAACTTTTGAGAAATGTAACGGATTGCCCTTTATACATGGAAGGGGGTCGGTAATGTCGGGGGGAAGCTAGAGCCTGGAACAACATGATTCTCTTATAACGCTATGGATGTGAAGATTAAAAGGTGATAGATAGGGAATGTGTGTAGTTTCAGTAAAGAGTTGTAGCCAAATCATTTGAATGAAATGTTTTAGTGTAATAACCTGGAGCTGAAAGTTGCAAAAGTTCTGTACTTTGTGTTTTGCTCTGATGATCTCAATGGGATTATCTGCCTGCCTGCTTGTATATTTCTAGTGGAGGTGGAGGCCTCAACTTTCATGTGGCACTTAAAAGCAATAAACTAGTTATCAAGTCTTCTAAACGATGTAAGTATATGCCTATTGAAAATCTAATTAGATATCATATTGAACACCA ATGACTTCAAGCAGTTGGAGAAGAACGGTTGGGAATGTCAGGTCCTTCATCGGCAACTCCATGGGCGGTCTCCGAGGCGGTACCAATCTTGCTTCCTGGGTAGTCGCTGGAACTCTTGCCTACTTCCTCTGGGTCAAGCCTTCCCAAGACCTCAAACGTGAACAGCAAGAAAGAGCTGCTCTTGCAGCCACGGATCCTTATCGATACATCGAGAAGAGGAAACCTATTCCTGATCCCCAGGAGACTGGTTTGATATACGGCAATAAGAATAAACCTCAAAAATCAGAGGAATAA MTSSSWRRTVGNVRSFIGNSMGGLRGGTNLASWVVAGTLAYFLWVKPSQDLKREQQERAALAATDPYRYIEKRKPIPDPQETGLIYGNKNKPQKSEE
BLAST of CmaCh04G005590 vs. TrEMBL
Match: A0A0A0KZ01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G089280 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 3.1e-43 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CmaCh04G005590 vs. TrEMBL
Match: A0A067KP46_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08029 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42 Identity = 86/95 (90.53%), Postives = 91/95 (95.79%), Query Frame = 1
BLAST of CmaCh04G005590 vs. TrEMBL
Match: V4TG86_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002952mg PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.1e-40 Identity = 81/95 (85.26%), Postives = 91/95 (95.79%), Query Frame = 1
BLAST of CmaCh04G005590 vs. TrEMBL
Match: A0A067H099_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034394mg PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 1.1e-40 Identity = 81/95 (85.26%), Postives = 91/95 (95.79%), Query Frame = 1
BLAST of CmaCh04G005590 vs. TrEMBL
Match: B9H5W7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27840g PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.4e-40 Identity = 80/95 (84.21%), Postives = 91/95 (95.79%), Query Frame = 1
BLAST of CmaCh04G005590 vs. TAIR10
Match: AT2G33585.1 (AT2G33585.1 unknown protein) HSP 1 Score: 150.6 bits (379), Expect = 5.0e-37 Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 1
BLAST of CmaCh04G005590 vs. NCBI nr
Match: gi|659101596|ref|XP_008451690.1| (PREDICTED: uncharacterized protein LOC103492913 isoform X2 [Cucumis melo]) HSP 1 Score: 183.0 bits (463), Expect = 2.6e-43 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 1
BLAST of CmaCh04G005590 vs. NCBI nr
Match: gi|449438867|ref|XP_004137209.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X2 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 4.4e-43 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CmaCh04G005590 vs. NCBI nr
Match: gi|659101588|ref|XP_008451686.1| (PREDICTED: uncharacterized protein LOC103492913 isoform X1 [Cucumis melo]) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42 Identity = 87/96 (90.62%), Postives = 91/96 (94.79%), Query Frame = 1
BLAST of CmaCh04G005590 vs. NCBI nr
Match: gi|802604326|ref|XP_012073563.1| (PREDICTED: uncharacterized protein LOC105635169 [Jatropha curcas]) HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42 Identity = 86/95 (90.53%), Postives = 91/95 (95.79%), Query Frame = 1
BLAST of CmaCh04G005590 vs. NCBI nr
Match: gi|778691650|ref|XP_011653320.1| (PREDICTED: uncharacterized protein LOC101205325 isoform X1 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42 Identity = 86/96 (89.58%), Postives = 92/96 (95.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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