Csa4G000660 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa4G000660
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Cyclin d protein; contains IPR013763 (Cyclin-like)
Location	Chr4 : 107482 .. 109708 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGTGAGAGTAAGAGTGAGAGTGTGAGTGCAAAGCATTGAGTATGTTTCATCCAAACCCATAAATCCAGCGATGGCCATCACTCCCAACGATCCCACCGCCTCTCTCCCTCCCCGTTTTCTCACCCTTCAATGCCGTCTCCTCCGCCTCTCCCCTCCTAATCTCTTCCTTCCTCAATGTCTCTCTCTCCCCACCATCATTCCCCCGCTTCTTCCTCCTCCTCCTCCTCCTCTCACTTCCTCTGTTCCTCCGCCCCCGACTTTCCGCTCTCCGATGACTCCCCCATTTTCACTCTTCTTCAATCCCAGCTCCACCACATGCCCCGCCTCGACTACCTCCGCCGCTGCCGTGACCACTCCATCGACCTCACTGCCCGTCAAGACTCCATCAACTGGATCTTGATGGTACTGCTCACTCCAAATTTCGCATCCACCTTCTTCGTCATTCTTCTTCTTGTTTTCTTTTTCTTTTTCTTTTTTTATCAATGGATTAGGGTTTTGCAGGTTCACTCCCACTACAATTTCAAACCGGTGACTGCGATTCTCTCTGTTAATTACTTTGATCGCTTCCTCTCCTCCAATATTCTTCCAGTTGAGATACCTTTTCGATTTCCCCACTATTAATGTCATTGATTGTTCAATAATCGATTCAGAATTTGGAGGCTGATGATTTTAGGTTTTTTTTTTTTTTTTTTTTAATTTGCAGCGGCGAAATGGATGGGCGTTTCAGCTTCTATCGGTGGCGTGTTTGTCATTAGCGGCGAAAATGGAAGAACCTGAGGTTCCGTTGCTTTTGGACCTTCAAATCTTTGAACCTAAGTACGTATTCGAGCCAAAAACCGTTCAGAGAATGGAGCTTTGGGTTATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTTCTCCACCACTTCATCTCCGATCTTCCTTCGTCTTCTTCTGCCGCTGACGGCGGTCGTGGAGACGGCGATGATTCTGATCGCTTATTCTCATCTTCTTCCGATCTCATTCTCAGCACCATACGCGGTAACTGAAATCGATTCTGTTATCACATTTTTATTTTTTGTCTTCTTTGTTTTTGTAATTCGATTTATTTGGTTTTGATTGTTTTTTCTTGTTGATTTGGAATGACTTTCAGTGATCGATTTCTTGGAGTTTCCGCCGTCCACCATTGCTGCCGCCGCCGTTCTCTGTGCCGCTGGTGAACGGTTGAATTCTCCGGCGGGTTGTTCCCATTTTCTTGCGGCGAACAGAATCGTAAGTATTATCAATTCAACATCTCTTGAGGTTAATGTATAAAACTTAAAAACAAAAATCCATTTTTACAAGATTTATTTAAAATCCTTTACCTTAAATTTATGAATTTTATGGTTCAAGATCTTTGTGAACGACTTAAACAACTCCAATTTTAATTTACTCTCTAAAAAACAAACCTTTCACCTTCTCATTTATTCCAAAAATATTTATATTCTCTTACCTCAATCACTTTTCATTATCATTTCCAAAACTACTCTTAATAAAAATTTCAAAACAATAATTTTGATCGGACACCATGACATTTTTTCCATTTCTATCTAAAATAAAATTTCAACAAATTTATACTCAAGTAGAGACAAAATCCCAAGTTGGAAAAATAATAGAAATTATTTTCAAAACAAATGTAAGTTAAGCCACAAAAATTATACGTACACACTTCTTTTATAATAATACATATACACGTATAGAGTTCAAACCATAAACCTTTACTTATACAAGAATTAAACTAAAAGATGATAAAGTGTAAAAGTTAAAAAAAAAAAAAAGAAAAATGATGGGGTGAAATTAAAATAAAAGCAAAATGAAGTTTAAGCATTTACTACTGATTTAATTTTGGTATATATATATATATATATATTTGTTTATTGGGAATAGGAAAATGTGAAAAGCTGTCAACAACTAATGGAGGAGTACGTGATTGACACGTGTACAGCGGAGCTCCGAAAACAGCGGAGGATAGGAGAAGAGGAACCGGCTCCACCGAGTCCAGTCGGGGTTCTCGACGCGGCTGCTTGCGCTAGCTGTGACAATCCTGGCTCCACCAGCCACGAGCCGCCCTCTAAGAGGATACGCTCCTCTGCCCCCGATGTACAGCACCAGTAGATAAGACCTACTTCGTGTCATTTTCTTATAGGGGGGGGGGAGATAGAGAGATAGAGAGAGATAGAGAGAGAGGGAGA

mRNA sequence

ATGTCTCTCTCTCCCCACCATCATTCCCCCGCTTCTTCCTCCTCCTCCTCCTCCTCTCACTTCCTCTGTTCCTCCGCCCCCGACTTTCCGCTCTCCGATGACTCCCCCATTTTCACTCTTCTTCAATCCCAGCTCCACCACATGCCCCGCCTCGACTACCTCCGCCGCTGCCGTGACCACTCCATCGACCTCACTGCCCGTCAAGACTCCATCAACTGGATCTTGATGGTTCACTCCCACTACAATTTCAAACCGGTGACTGCGATTCTCTCTGTTAATTACTTTGATCGCTTCCTCTCCTCCAATATTCTTCCACGGCGAAATGGATGGGCGTTTCAGCTTCTATCGGTGGCGTGTTTGTCATTAGCGGCGAAAATGGAAGAACCTGAGGTTCCGTTGCTTTTGGACCTTCAAATCTTTGAACCTAAGTACGTATTCGAGCCAAAAACCGTTCAGAGAATGGAGCTTTGGGTTATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTTCTCCACCACTTCATCTCCGATCTTCCTTCGTCTTCTTCTGCCGCTGACGGCGGTCGTGGAGACGGCGATGATTCTGATCGCTTATTCTCATCTTCTTCCGATCTCATTCTCAGCACCATACGCGTGATCGATTTCTTGGAGTTTCCGCCGTCCACCATTGCTGCCGCCGCCGTTCTCTGTGCCGCTGGTGAACGGTTGAATTCTCCGGCGGGTTGTTCCCATTTTCTTGCGGCGAACAGAATCGAAAATGTGAAAAGCTGTCAACAACTAATGGAGGAGTACGTGATTGACACGTGTACAGCGGAGCTCCGAAAACAGCGGAGGATAGGAGAAGAGGAACCGGCTCCACCGAGTCCAGTCGGGGTTCTCGACGCGGCTGCTTGCGCTAGCTGTGACAATCCTGGCTCCACCAGCCACGAGCCGCCCTCTAAGAGGATACGCTCCTCTGCCCCCGATGTACAGCACCAGTAG

Coding sequence (CDS)

ATGTCTCTCTCTCCCCACCATCATTCCCCCGCTTCTTCCTCCTCCTCCTCCTCCTCTCACTTCCTCTGTTCCTCCGCCCCCGACTTTCCGCTCTCCGATGACTCCCCCATTTTCACTCTTCTTCAATCCCAGCTCCACCACATGCCCCGCCTCGACTACCTCCGCCGCTGCCGTGACCACTCCATCGACCTCACTGCCCGTCAAGACTCCATCAACTGGATCTTGATGGTTCACTCCCACTACAATTTCAAACCGGTGACTGCGATTCTCTCTGTTAATTACTTTGATCGCTTCCTCTCCTCCAATATTCTTCCACGGCGAAATGGATGGGCGTTTCAGCTTCTATCGGTGGCGTGTTTGTCATTAGCGGCGAAAATGGAAGAACCTGAGGTTCCGTTGCTTTTGGACCTTCAAATCTTTGAACCTAAGTACGTATTCGAGCCAAAAACCGTTCAGAGAATGGAGCTTTGGGTTATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTTCTCCACCACTTCATCTCCGATCTTCCTTCGTCTTCTTCTGCCGCTGACGGCGGTCGTGGAGACGGCGATGATTCTGATCGCTTATTCTCATCTTCTTCCGATCTCATTCTCAGCACCATACGCGTGATCGATTTCTTGGAGTTTCCGCCGTCCACCATTGCTGCCGCCGCCGTTCTCTGTGCCGCTGGTGAACGGTTGAATTCTCCGGCGGGTTGTTCCCATTTTCTTGCGGCGAACAGAATCGAAAATGTGAAAAGCTGTCAACAACTAATGGAGGAGTACGTGATTGACACGTGTACAGCGGAGCTCCGAAAACAGCGGAGGATAGGAGAAGAGGAACCGGCTCCACCGAGTCCAGTCGGGGTTCTCGACGCGGCTGCTTGCGCTAGCTGTGACAATCCTGGCTCCACCAGCCACGAGCCGCCCTCTAAGAGGATACGCTCCTCTGCCCCCGATGTACAGCACCAGTAG

Protein sequence

MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAAACASCDNPGSTSHEPPSKRIRSSAPDVQHQ*

Homology

[Close]

BLAST of Csa4G000660 vs. Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 6.7e-51
Identity = 125/292 (42.81%), Postives = 163/292 (55.82%), Query Frame = 1


Query: 28  DFPLSDDSPIFTLLQSQLHHMPRLDYLRRCR----DHSIDLTARQDSINWILMVHSHYNF 87
           DF +  +  +  L++++  HMPR DY  R R    D  +DL  R D+I+WI  VHS+Y+F
Sbjct: 60  DFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSF 119

Query: 88  KPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPK 147
            P+TA L+VNY DRFLS   LP    W  QLL+VACLSLAAKMEE +VP  LDLQ+ E +
Sbjct: 120 APLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEER 179

Query: 148 YVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLF 207
           YVFE KT+QRMEL V+S L WR++AVTPF ++ +F+ +L           G    S R  
Sbjct: 180 YVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLREL----------NGGDPPSGRSA 239

Query: 208 SSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQ 267
             SS+LIL   R  + L F PS IAAA      GE     A  SH    N+ E +  CQ+
Sbjct: 240 LLSSELILCIARGTECLGFRPSEIAAAVAAAVVGE---EHAAFSH---VNK-ERMSHCQE 299

Query: 268 LMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAAACAS--CDNPGSTSH 314
           +++   ++    +     R+      P SP GVLDAA C S   D+    SH
Sbjct: 300 VIQ--AMELIHPKPSSPSRVFVSSSIPRSPTGVLDAAGCLSYRSDDSAVASH 332

[Close]

BLAST of Csa4G000660 vs. Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 194.5 bits (493), Expect = 1.8e-48
Identity = 107/225 (47.56%), Postives = 142/225 (63.11%), Query Frame = 1


Query: 14  SSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINW 73
           S  S+  F  S    +P   DS I   ++ + H +P  DYL R +  S+D +AR+DS+ W
Sbjct: 32  SGESTVDFSSSEVDSWP--GDS-IACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAW 91

Query: 74  ILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPL 133
           IL V ++YNF+P+TA L+VNY DRFL +  LP  +GW  QLL+VACLSLAAKMEE  VP 
Sbjct: 92  ILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPS 151

Query: 134 LLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGR 193
           L D Q+   KY+FE KT++RMEL V+S+L+WRLR+VTPFDF+  F   +  S        
Sbjct: 152 LFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPS-------- 211

Query: 194 GDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGE 239
             G       S ++++ILS I+   FLE+ PS+IAAAA+LC A E
Sbjct: 212 --GTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANE 243

[Close]

BLAST of Csa4G000660 vs. Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.0e-47
Identity = 116/276 (42.03%), Postives = 153/276 (55.43%), Query Frame = 1


Query: 29  FPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTA 88
           FP+  D  +  L++ ++ H P+  YL +     ++ + R+D+I+WI  VHS+YNF P++ 
Sbjct: 57  FPIDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSL 116

Query: 89  ILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEP 148
            L+VNY DRFLSS  LP    W  QLLSV+CLSLA KMEE  VPL +DLQ+F+ +YVFE 
Sbjct: 117 YLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEA 176

Query: 149 KTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSD 208
           + ++RMEL VM  L WRL+AVTPF F+ +F+                   S  L S  SD
Sbjct: 177 RHIKRMELIVMKTLKWRLQAVTPFSFIGYFLDKFNEGK----------PPSYTLASWCSD 236

Query: 209 LILSTIRVIDFLEFPPSTIAAAAVLCAAGER----LNSPAGCSHFLAANRIENVKSCQQL 268
           L + T++   FL F PS IAAA VL    E      NS  G S  +  N+ E V  C +L
Sbjct: 237 LTVGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESE-IPVNK-EMVMRCYEL 296

Query: 269 MEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA 301
           M E       A ++K R        P SP+ VLDAA
Sbjct: 297 MVE------KALVKKIRNSNASSSVPHSPITVLDAA 314

[Close]

BLAST of Csa4G000660 vs. Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 188.7 bits (478), Expect = 1.0e-46
Identity = 124/321 (38.63%), Postives = 176/321 (54.83%), Query Frame = 1


Query: 10  PASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQD 69
           P   SSSSS            LS+D  I  +L  ++   P  DY++R     +DL+ R  
Sbjct: 53  PMMGSSSSS------------LSEDR-IKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQ 112

Query: 70  SINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEP 129
           +++WIL V +HY+F  +   LS+NY DRFL+S  LP+   WA QLL+V+CLSLA+KMEE 
Sbjct: 113 ALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEET 172

Query: 130 EVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAA 189
           +VP ++DLQ+ +PK+VFE KT++RMEL V++ LNWRL+A+TPF F+ +F+  +       
Sbjct: 173 DVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI------- 232

Query: 190 DGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAA----GERLNSPAG 249
                 G  S+ L   SS  IL+T + I+FL+F PS IAAAA +  +     E ++    
Sbjct: 233 -----SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKA 292

Query: 250 CSHFLAANRIENVKSCQQLM-----EEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA 309
            S  +   + E VK C  LM     EE V  T  ++  +Q R+      P SPVGVL+A 
Sbjct: 293 LSSLIYVKQ-ERVKRCLNLMRSLTGEENVRGTSLSQ--EQARVA-VRAVPASPVGVLEAT 344

Query: 310 ACA---------SCDNPGSTS 313
             +         SC N   +S
Sbjct: 353 CLSYRSEERTVESCTNSSQSS 344

[Close]

BLAST of Csa4G000660 vs. Swiss-Prot
Match: CCD42_ORYSJ (Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2)

HSP 1 Score: 183.3 bits (464), Expect = 4.2e-45
Identity = 114/283 (40.28%), Postives = 150/283 (53.00%), Query Frame = 1


Query: 29  FPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHS--IDLTARQDSINWILMVHSHYNFKPV 88
           FP   +  + +L++ +  HMPR DY  R R     +DL  R ++I WI  V+++YNF  V
Sbjct: 70  FPRQSEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNFSSV 129

Query: 89  TAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVF 148
           TA L+VNY DRFLS   LP    W  QLLSVACLS+AAKMEE  VP  LDLQI EP+++F
Sbjct: 130 TAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQIGEPRFLF 189

Query: 149 EPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSS 208
           E +T+ RMEL V++ LNWR++AVTPF ++ +F+  L S ++A                 S
Sbjct: 190 EVETIHRMELLVLTNLNWRMQAVTPFSYIDYFLRKLNSGNAAPRS----------WLLRS 249

Query: 209 SDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERLN--SPAGCSHFLAANRIENVKSCQQL 268
           S+LIL       FLEF PS IAAA     AGE            F   ++   V  CQ+ 
Sbjct: 250 SELILRIAAGTGFLEFRPSEIAAAVAATVAGEATGVVEEDIAEAFTHVDK-GRVLQCQEA 309

Query: 269 MEEYVIDTCT--------AELRKQRRIGEEEPAPPSPVGVLDA 300
           ++++     T        A  R+          P SPV VLDA
Sbjct: 310 IQDHHYSMATINTVQPKPASTRRGSASASSSSVPESPVAVLDA 341

[Close]

BLAST of Csa4G000660 vs. TrEMBL
Match: A0A0A0KSY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000660 PE=3 SV=1)

HSP 1 Score: 669.8 bits (1727), Expect = 1.6e-189
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 1


Query: 1   MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH 60
           MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH
Sbjct: 1   MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH 60

Query: 61  SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL 120
           SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL
Sbjct: 61  SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL 120

Query: 121 SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 180
           SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS
Sbjct: 121 SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 180

Query: 181 DLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERL 240
           DLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERL
Sbjct: 181 DLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERL 240

Query: 241 NSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA 300
           NSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA
Sbjct: 241 NSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA 300

Query: 301 ACASCDNPGSTSHEPPSKRIRSSAPDVQHQ 331
           ACASCDNPGSTSHEPPSKRIRSSAPDVQHQ
Sbjct: 301 ACASCDNPGSTSHEPPSKRIRSSAPDVQHQ 330

[Close]

BLAST of Csa4G000660 vs. TrEMBL
Match: E5GBG8_CUCME (Cyclin d protein OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 3.1e-172
Identity = 309/347 (89.05%), Postives = 319/347 (91.93%), Query Frame = 1


Query: 1   MSLSPHHHSPA--------SSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLD 60
           MSLSPHHHSPA        SSSSSSSSHFLCS APDFP+SDDSPI TLLQS+LHHMPR+D
Sbjct: 1   MSLSPHHHSPASSSSSSSSSSSSSSSSHFLCSYAPDFPISDDSPISTLLQSELHHMPRID 60

Query: 61  YLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120
           YLRRCRDHSID+TARQDSINWIL VHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF
Sbjct: 61  YLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120

Query: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180
           QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF
Sbjct: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180

Query: 181 DFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAV 240
           DFLHHFISDLP+SSSAA+ GRGD DDS RLFSSSSDLILST RVIDFLEFPPSTIAAAAV
Sbjct: 181 DFLHHFISDLPTSSSAAESGRGDSDDSHRLFSSSSDLILSTTRVIDFLEFPPSTIAAAAV 240

Query: 241 LCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPS 300
           LCAAGERL+SP  C+HFLAANRIENVKSC QLMEEYVIDTCTAELRKQRRIGEE+PAPPS
Sbjct: 241 LCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYVIDTCTAELRKQRRIGEEQPAPPS 300

Query: 301 PVGVLDAAACASC----DNPGSTSHEP-----PSKRIRSSAPDVQHQ 331
           PVGVLDAAAC SC    D+PGSTSHEP     PSKRIRSSAPDVQHQ
Sbjct: 301 PVGVLDAAACGSCDTRLDHPGSTSHEPPAEPSPSKRIRSSAPDVQHQ 347

[Close]

BLAST of Csa4G000660 vs. TrEMBL
Match: A0A061E2C5_THECC (Cyclin d1,1 isoform 2 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.2e-102
Identity = 213/357 (59.66%), Postives = 251/357 (70.31%), Query Frame = 1


Query: 1   MSLSPH----HHSPASSSSSSSSHFLCS--------------------SAPDFPLSDDSP 60
           MSLS +    ++S  S++SSSS+   C                     S  ++P SD + 
Sbjct: 1   MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 60

Query: 61  IFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFD 120
           I  L+  + HHMP  DYL R +D SID+TARQDSINWIL VH++Y+F PVTA LSVNYFD
Sbjct: 61  ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 120

Query: 121 RFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMEL 180
           RFLSS+ LP+ NGW FQLLSVACLSLAAKMEEP+VPLLLDLQ+FEP++ FEPKT+QRMEL
Sbjct: 121 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 180

Query: 181 WVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRV 240
            VM+ LNWRLR+VTPFD+LHHFI  LPS S+         +    + S+SSDLILST RV
Sbjct: 181 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLP------NSFSSVVSASSDLILSTTRV 240

Query: 241 IDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAE 300
           IDFL F PSTIAAAAVLCAAGE    PA  + F      E V SC QLMEEY+IDTC + 
Sbjct: 241 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 300

Query: 301 LRKQRRIGEEEPAPPSPVGVLDAAACASCD----NPGSTS-HEPPSKRIRSSAPDVQ 329
             K+ R G + PAPPSPVGVLDAAAC SCD    NPGS+S  EPP+KR+RSSAPDVQ
Sbjct: 301 RLKELR-GAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQ 350

[Close]

BLAST of Csa4G000660 vs. TrEMBL
Match: A0A061E0K0_THECC (Cyclin d1,1 isoform 1 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.2e-102
Identity = 213/357 (59.66%), Postives = 251/357 (70.31%), Query Frame = 1


Query: 1   MSLSPH----HHSPASSSSSSSSHFLCS--------------------SAPDFPLSDDSP 60
           MSLS +    ++S  S++SSSS+   C                     S  ++P SD + 
Sbjct: 51  MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 110

Query: 61  IFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFD 120
           I  L+  + HHMP  DYL R +D SID+TARQDSINWIL VH++Y+F PVTA LSVNYFD
Sbjct: 111 ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 170

Query: 121 RFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMEL 180
           RFLSS+ LP+ NGW FQLLSVACLSLAAKMEEP+VPLLLDLQ+FEP++ FEPKT+QRMEL
Sbjct: 171 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 230

Query: 181 WVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRV 240
            VM+ LNWRLR+VTPFD+LHHFI  LPS S+         +    + S+SSDLILST RV
Sbjct: 231 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLP------NSFSSVVSASSDLILSTTRV 290

Query: 241 IDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAE 300
           IDFL F PSTIAAAAVLCAAGE    PA  + F      E V SC QLMEEY+IDTC + 
Sbjct: 291 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 350

Query: 301 LRKQRRIGEEEPAPPSPVGVLDAAACASCD----NPGSTS-HEPPSKRIRSSAPDVQ 329
             K+ R G + PAPPSPVGVLDAAAC SCD    NPGS+S  EPP+KR+RSSAPDVQ
Sbjct: 351 RLKELR-GAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQ 400

[Close]

BLAST of Csa4G000660 vs. TrEMBL
Match: A0A0D2SM42_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G230300 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 1.2e-102
Identity = 202/351 (57.55%), Postives = 247/351 (70.37%), Query Frame = 1


Query: 1   MSLSPHHHSPASSSSSSSSHFLCSS--------APD---------FPLSDDSPIFTLLQS 60
           MSLS  H +P +SSS S++   C           P+         +P  D++ I  L+ S
Sbjct: 18  MSLSHSHSTPLNSSSVSAASLSCGEDAGEVVTWEPEPFSGHHDKYYPNPDENAISRLIDS 77

Query: 61  QLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNI 120
           + HHMP  DYLRRC+D S+D+ +RQDSINW+L VH+HY+F PVTA LSVNYFDR+LSS  
Sbjct: 78  ESHHMPLPDYLRRCQDRSVDVISRQDSINWMLKVHAHYHFSPVTAFLSVNYFDRYLSSYS 137

Query: 121 LPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILN 180
           LP+ NGW FQLLSVACLSLAAKMEEP+VPLLLDLQ+FEP++VFEPKT+QRMEL VM+ LN
Sbjct: 138 LPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFVFEPKTIQRMELRVMAALN 197

Query: 181 WRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFP 240
           WRL +VTPFD+LH+FIS LPS S+         D    + ++SSDLIL+T RVIDFL F 
Sbjct: 198 WRLCSVTPFDYLHYFISKLPSCSTRL------SDSFSSIIAASSDLILNTTRVIDFLRFA 257

Query: 241 PSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRI 300
           PST+AAAA+LCA G+ L  PA    F  +   E V+SC QLMEEY++DTC +   K+ R+
Sbjct: 258 PSTMAAAALLCATGDSLECPARDVFFHESVNREMVRSCHQLMEEYLVDTCPSARFKELRV 317

Query: 301 GEEEPAPPSPVGVLDAAACASCDN----PGSTS--HEPPSKRIRSSAPDVQ 329
            +   APPSPVGVLDAAAC SCD     PGS+S   EPP KR RSS PDVQ
Sbjct: 318 EQPSTAPPSPVGVLDAAACGSCDTRSEIPGSSSSQEEPPPKRFRSSDPDVQ 362

[Close]

BLAST of Csa4G000660 vs. TAIR10
Match: AT1G70210.1 (AT1G70210.1 CYCLIN D1;1)

HSP 1 Score: 194.5 bits (493), Expect = 1.0e-49
Identity = 107/225 (47.56%), Postives = 142/225 (63.11%), Query Frame = 1


Query: 14  SSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINW 73
           S  S+  F  S    +P   DS I   ++ + H +P  DYL R +  S+D +AR+DS+ W
Sbjct: 32  SGESTVDFSSSEVDSWP--GDS-IACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAW 91

Query: 74  ILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPL 133
           IL V ++YNF+P+TA L+VNY DRFL +  LP  +GW  QLL+VACLSLAAKMEE  VP 
Sbjct: 92  ILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPS 151

Query: 134 LLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGR 193
           L D Q+   KY+FE KT++RMEL V+S+L+WRLR+VTPFDF+  F   +  S        
Sbjct: 152 LFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDPS-------- 211

Query: 194 GDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGE 239
             G       S ++++ILS I+   FLE+ PS+IAAAA+LC A E
Sbjct: 212 --GTFLGFFISHATEIILSNIKEASFLEYWPSSIAAAAILCVANE 243

[Close]

BLAST of Csa4G000660 vs. TAIR10
Match: AT2G22490.2 (AT2G22490.2 Cyclin D2;1)

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-49
Identity = 124/321 (38.63%), Postives = 176/321 (54.83%), Query Frame = 1


Query: 10  PASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQD 69
           P   SSSSS            LS+D  I  +L  ++   P  DY++R     +DL+ R  
Sbjct: 53  PMMGSSSSS------------LSEDR-IKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQ 112

Query: 70  SINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEP 129
           +++WIL V +HY+F  +   LS+NY DRFL+S  LP+   WA QLL+V+CLSLA+KMEE 
Sbjct: 113 ALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEET 172

Query: 130 EVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAA 189
           +VP ++DLQ+ +PK+VFE KT++RMEL V++ LNWRL+A+TPF F+ +F+  +       
Sbjct: 173 DVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI------- 232

Query: 190 DGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAA----GERLNSPAG 249
                 G  S+ L   SS  IL+T + I+FL+F PS IAAAA +  +     E ++    
Sbjct: 233 -----SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKA 292

Query: 250 CSHFLAANRIENVKSCQQLM-----EEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA 309
            S  +   + E VK C  LM     EE V  T  ++  +Q R+      P SPVGVL+A 
Sbjct: 293 LSSLIYVKQQERVKRCLNLMRSLTGEENVRGTSLSQ--EQARVA-VRAVPASPVGVLEAT 345

Query: 310 ACA---------SCDNPGSTS 313
             +         SC N   +S
Sbjct: 353 CLSYRSEERTVESCTNSSQSS 345

[Close]

BLAST of Csa4G000660 vs. TAIR10
Match: AT5G65420.3 (AT5G65420.3 CYCLIN D4;1)

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-44
Identity = 106/280 (37.86%), Postives = 157/280 (56.07%), Query Frame = 1


Query: 37  IFTLLQSQLHHMPRLDYLRRCRDHSIDLTA-RQDSINWILMVHSH----------YNFKP 96
           I  +++ +  H+P  DY++R R   +DL   R+D++NWI  +             + F P
Sbjct: 47  IMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREACEVHQFGP 106

Query: 97  VTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYV 156
           +   L++NY DRFLS + LP   GW  QLL+VACLSLAAK+EE EVP+L+DLQ+ +P++V
Sbjct: 107 LCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFV 166

Query: 157 FEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSS 216
           FE K+VQRMEL V++ L WRLRA+TP  ++ +F+  +          + D + S+ L S 
Sbjct: 167 FEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM---------SKCDQEPSNTLISR 226

Query: 217 SSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGE--RLN-SPAGCSHFLAANRIENVKSCQ 276
           S  +I ST + IDFLEF PS +AAA  L  +GE  R++   +  S   +  + E VK   
Sbjct: 227 SLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQKERVKKIG 286

Query: 277 QLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAAAC 303
           +++E    D C+                 +P GVL+ +AC
Sbjct: 287 EMIESDGSDLCS----------------QTPNGVLEVSAC 301

[Close]

BLAST of Csa4G000660 vs. TAIR10
Match: AT5G10440.1 (AT5G10440.1 cyclin d4;2)

HSP 1 Score: 176.0 bits (445), Expect = 3.8e-44
Identity = 97/238 (40.76%), Postives = 136/238 (57.14%), Query Frame = 1


Query: 29  FPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTA 88
           FPL  +  +  +++ +  H PR DYL+R R+  +D   R  ++ WI        F P+  
Sbjct: 31  FPLESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCI 90

Query: 89  ILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEP 148
            L++NY DRFLS + LP    W  QLL+VACLSLAAK+EE  VP L+ LQ+  P +VFE 
Sbjct: 91  CLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEA 150

Query: 149 KTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSD 208
           K+VQRMEL V+++L WRLRAVTP  ++ +F+S +            D +   RL + S  
Sbjct: 151 KSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGY---------DQEPHSRLVTRSLQ 210

Query: 209 LILSTIRVIDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLME 267
           +I ST + IDFLEF  S IAAA  L  +GE  +  +  S F +  + E VK   +++E
Sbjct: 211 VIASTTKGIDFLEFRASEIAAAVALSVSGEHFDKFSFSSSFSSLEK-ERVKKIGEMIE 258

[Close]

BLAST of Csa4G000660 vs. TAIR10
Match: AT4G34160.1 (AT4G34160.1 CYCLIN D3;1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 109/335 (32.54%), Postives = 169/335 (50.45%), Query Frame = 1


Query: 12  SSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSI 71
           SS SSSSS F+      F   +D  + TL   +            C D     T R++++
Sbjct: 40  SSLSSSSSPFVVLQQDLF--WEDEDLVTLFSKEEEQG------LSCLDDVYLSTDRKEAV 99

Query: 72  NWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEV 131
            WIL V++HY F  + A+L++ Y D+F+ S  L R   W  QL+SVACLSLAAK+EE +V
Sbjct: 100 GWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQV 159

Query: 132 PLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADG 191
           PLLLD Q+ E KYVFE KT+QRMEL ++S L W++  +TP  F+ H I  L   ++A   
Sbjct: 160 PLLLDFQVEETKYVFEAKTIQRMELLILSTLEWKMHLITPISFVDHIIRRLGLKNNA--- 219

Query: 192 GRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAV--LCAAGERLNSPAGCSHF 251
                       +    L+LS I    F+ + PS +AAA +  +    +  +  +  ++ 
Sbjct: 220 -------HWDFLNKCHRLLLSVISDSRFVGYLPSVVAAATMMRIIEQVDPFDPLSYQTNL 279

Query: 252 LAANRI--ENVKSCQQLMEEYVIDTCTAELR----KQRRIGEEEPAPPSPVGVLDAA--- 311
           L    +  E VK+C  L+ +  +D    +++    K+R+  +   +  SP  V+DA    
Sbjct: 280 LGVLNLTKEKVKTCYDLILQLPVDRIGLQIQIQSSKKRKSHDSSSSLNSPSCVIDANPFN 339

Query: 312 ---------ACASCDNPGSTS---HEPPSKRIRSS 324
                    + +SC+ P S+S    +PP K++R +
Sbjct: 340 SDESSNDSWSASSCNPPTSSSSPQQQPPLKKMRGA 356

[Close]

BLAST of Csa4G000660 vs. NCBI nr
Match: gi|449465087|ref|XP_004150260.1| (PREDICTED: cyclin-D4-1-like [Cucumis sativus])

HSP 1 Score: 669.8 bits (1727), Expect = 2.4e-189
Identity = 330/330 (100.00%), Postives = 330/330 (100.00%), Query Frame = 1


Query: 1   MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH 60
           MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH
Sbjct: 1   MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH 60

Query: 61  SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL 120
           SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL
Sbjct: 61  SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL 120

Query: 121 SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 180
           SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS
Sbjct: 121 SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 180

Query: 181 DLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERL 240
           DLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERL
Sbjct: 181 DLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERL 240

Query: 241 NSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA 300
           NSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA
Sbjct: 241 NSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAA 300

Query: 301 ACASCDNPGSTSHEPPSKRIRSSAPDVQHQ 331
           ACASCDNPGSTSHEPPSKRIRSSAPDVQHQ
Sbjct: 301 ACASCDNPGSTSHEPPSKRIRSSAPDVQHQ 330

[Close]

BLAST of Csa4G000660 vs. NCBI nr
Match: gi|659108835|ref|XP_008454410.1| (PREDICTED: cyclin-D4-2-like [Cucumis melo])

HSP 1 Score: 612.5 bits (1578), Expect = 4.5e-172
Identity = 309/347 (89.05%), Postives = 319/347 (91.93%), Query Frame = 1


Query: 1   MSLSPHHHSPA--------SSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLD 60
           MSLSPHHHSPA        SSSSSSSSHFLCS APDFP+SDDSPI TLLQS+LHHMPR+D
Sbjct: 1   MSLSPHHHSPASSSSSSSSSSSSSSSSHFLCSYAPDFPISDDSPISTLLQSELHHMPRID 60

Query: 61  YLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120
           YLRRCRDHSID+TARQDSINWIL VHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF
Sbjct: 61  YLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120

Query: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180
           QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF
Sbjct: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180

Query: 181 DFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAV 240
           DFLHHFISDLP+SSSAA+ GRGD DDS RLFSSSSDLILST RVIDFLEFPPSTIAAAAV
Sbjct: 181 DFLHHFISDLPTSSSAAESGRGDSDDSHRLFSSSSDLILSTTRVIDFLEFPPSTIAAAAV 240

Query: 241 LCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPS 300
           LCAAGERL+SP  C+HFLAANRIENVKSC QLMEEYVIDTCTAELRKQRRIGEE+PAPPS
Sbjct: 241 LCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYVIDTCTAELRKQRRIGEEQPAPPS 300

Query: 301 PVGVLDAAACASC----DNPGSTSHEP-----PSKRIRSSAPDVQHQ 331
           PVGVLDAAAC SC    D+PGSTSHEP     PSKRIRSSAPDVQHQ
Sbjct: 301 PVGVLDAAACGSCDTRLDHPGSTSHEPPAEPSPSKRIRSSAPDVQHQ 347

[Close]

BLAST of Csa4G000660 vs. NCBI nr
Match: gi|823160558|ref|XP_012480123.1| (PREDICTED: cyclin-D1-1-like [Gossypium raimondii])

HSP 1 Score: 381.3 bits (978), Expect = 1.7e-102
Identity = 202/351 (57.55%), Postives = 247/351 (70.37%), Query Frame = 1


Query: 1   MSLSPHHHSPASSSSSSSSHFLCSS--------APD---------FPLSDDSPIFTLLQS 60
           MSLS  H +P +SSS S++   C           P+         +P  D++ I  L+ S
Sbjct: 18  MSLSHSHSTPLNSSSVSAASLSCGEDAGEVVTWEPEPFSGHHDKYYPNPDENAISRLIDS 77

Query: 61  QLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNI 120
           + HHMP  DYLRRC+D S+D+ +RQDSINW+L VH+HY+F PVTA LSVNYFDR+LSS  
Sbjct: 78  ESHHMPLPDYLRRCQDRSVDVISRQDSINWMLKVHAHYHFSPVTAFLSVNYFDRYLSSYS 137

Query: 121 LPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILN 180
           LP+ NGW FQLLSVACLSLAAKMEEP+VPLLLDLQ+FEP++VFEPKT+QRMEL VM+ LN
Sbjct: 138 LPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFVFEPKTIQRMELRVMAALN 197

Query: 181 WRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVIDFLEFP 240
           WRL +VTPFD+LH+FIS LPS S+         D    + ++SSDLIL+T RVIDFL F 
Sbjct: 198 WRLCSVTPFDYLHYFISKLPSCSTRL------SDSFSSIIAASSDLILNTTRVIDFLRFA 257

Query: 241 PSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRI 300
           PST+AAAA+LCA G+ L  PA    F  +   E V+SC QLMEEY++DTC +   K+ R+
Sbjct: 258 PSTMAAAALLCATGDSLECPARDVFFHESVNREMVRSCHQLMEEYLVDTCPSARFKELRV 317

Query: 301 GEEEPAPPSPVGVLDAAACASCDN----PGSTS--HEPPSKRIRSSAPDVQ 329
            +   APPSPVGVLDAAAC SCD     PGS+S   EPP KR RSS PDVQ
Sbjct: 318 EQPSTAPPSPVGVLDAAACGSCDTRSEIPGSSSSQEEPPPKRFRSSDPDVQ 362

[Close]

BLAST of Csa4G000660 vs. NCBI nr
Match: gi|590687458|ref|XP_007042669.1| (Cyclin d1,1 isoform 1 [Theobroma cacao])

HSP 1 Score: 381.3 bits (978), Expect = 1.7e-102
Identity = 213/357 (59.66%), Postives = 251/357 (70.31%), Query Frame = 1


Query: 1   MSLSPH----HHSPASSSSSSSSHFLCS--------------------SAPDFPLSDDSP 60
           MSLS +    ++S  S++SSSS+   C                     S  ++P SD + 
Sbjct: 51  MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 110

Query: 61  IFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFD 120
           I  L+  + HHMP  DYL R +D SID+TARQDSINWIL VH++Y+F PVTA LSVNYFD
Sbjct: 111 ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 170

Query: 121 RFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMEL 180
           RFLSS+ LP+ NGW FQLLSVACLSLAAKMEEP+VPLLLDLQ+FEP++ FEPKT+QRMEL
Sbjct: 171 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 230

Query: 181 WVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRV 240
            VM+ LNWRLR+VTPFD+LHHFI  LPS S+         +    + S+SSDLILST RV
Sbjct: 231 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLP------NSFSSVVSASSDLILSTTRV 290

Query: 241 IDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAE 300
           IDFL F PSTIAAAAVLCAAGE    PA  + F      E V SC QLMEEY+IDTC + 
Sbjct: 291 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 350

Query: 301 LRKQRRIGEEEPAPPSPVGVLDAAACASCD----NPGSTS-HEPPSKRIRSSAPDVQ 329
             K+ R G + PAPPSPVGVLDAAAC SCD    NPGS+S  EPP+KR+RSSAPDVQ
Sbjct: 351 RLKELR-GAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQ 400

[Close]

BLAST of Csa4G000660 vs. NCBI nr
Match: gi|590687462|ref|XP_007042670.1| (Cyclin d1,1 isoform 2 [Theobroma cacao])

HSP 1 Score: 381.3 bits (978), Expect = 1.7e-102
Identity = 213/357 (59.66%), Postives = 251/357 (70.31%), Query Frame = 1


Query: 1   MSLSPH----HHSPASSSSSSSSHFLCS--------------------SAPDFPLSDDSP 60
           MSLS +    ++S  S++SSSS+   C                     S  ++P SD + 
Sbjct: 1   MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 60

Query: 61  IFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFD 120
           I  L+  + HHMP  DYL R +D SID+TARQDSINWIL VH++Y+F PVTA LSVNYFD
Sbjct: 61  ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 120

Query: 121 RFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMEL 180
           RFLSS+ LP+ NGW FQLLSVACLSLAAKMEEP+VPLLLDLQ+FEP++ FEPKT+QRMEL
Sbjct: 121 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 180

Query: 181 WVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRV 240
            VM+ LNWRLR+VTPFD+LHHFI  LPS S+         +    + S+SSDLILST RV
Sbjct: 181 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLP------NSFSSVVSASSDLILSTTRV 240

Query: 241 IDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAE 300
           IDFL F PSTIAAAAVLCAAGE    PA  + F      E V SC QLMEEY+IDTC + 
Sbjct: 241 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 300

Query: 301 LRKQRRIGEEEPAPPSPVGVLDAAACASCD----NPGSTS-HEPPSKRIRSSAPDVQ 329
             K+ R G + PAPPSPVGVLDAAAC SCD    NPGS+S  EPP+KR+RSSAPDVQ
Sbjct: 301 RLKELR-GAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQ 350

The following BLAST results are available for this feature:

BLAST of Csa4G000660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCD41_ORYSJ	6.7e-51	42.81	Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2	[more]
CCD11_ARATH	1.8e-48	47.56	Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3	[more]
CCD22_ORYSJ	2.0e-47	42.03	Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1	[more]
CCD21_ARATH	1.0e-46	38.63	Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3	[more]
CCD42_ORYSJ	4.2e-45	40.28	Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2	[more]

BLAST of Csa4G000660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSY9_CUCSA	1.6e-189	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000660 PE=3 SV=1	[more]
E5GBG8_CUCME	3.1e-172	89.05	Cyclin d protein OS=Cucumis melo subsp. melo PE=3 SV=1	[more]
A0A061E2C5_THECC	1.2e-102	59.66	Cyclin d1,1 isoform 2 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1	[more]
A0A061E0K0_THECC	1.2e-102	59.66	Cyclin d1,1 isoform 1 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1	[more]
A0A0D2SM42_GOSRA	1.2e-102	57.55	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G230300 PE=3 SV=1	[more]

BLAST of Csa4G000660 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70210.1	1.0e-49	47.56	CYCLIN D1;1	[more]
AT2G22490.2	5.1e-49	38.63	Cyclin D2;1	[more]
AT5G65420.3	2.2e-44	37.86	CYCLIN D4;1	[more]
AT5G10440.1	3.8e-44	40.76	cyclin d4;2	[more]
AT4G34160.1	1.2e-37	32.54	CYCLIN D3;1	[more]

BLAST of Csa4G000660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449465087\|ref\|XP_004150260.1\|	2.4e-189	100.00	PREDICTED: cyclin-D4-1-like [Cucumis sativus]	[more]
gi\|659108835\|ref\|XP_008454410.1\|	4.5e-172	89.05	PREDICTED: cyclin-D4-2-like [Cucumis melo]	[more]
gi\|823160558\|ref\|XP_012480123.1\|	1.7e-102	57.55	PREDICTED: cyclin-D1-1-like [Gossypium raimondii]	[more]
gi\|590687458\|ref\|XP_007042669.1\|	1.7e-102	59.66	Cyclin d1,1 isoform 1 [Theobroma cacao]	[more]
gi\|590687462\|ref\|XP_007042670.1\|	1.7e-102	59.66	Cyclin d1,1 isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004367	Cyclin_C-dom
IPR006671	Cyclin_N
IPR013763	Cyclin-like

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051726	regulation of cell cycle
biological_process	GO:0006810	transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU172492	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa4G000660.1	Csa4G000660.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU172492	CU172492	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 169..279 score: 1.7
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 169..306 score: 7.4
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 40..166 score: 5.1
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 67..98 scor
IPR013763	Cyclin-like	GENE3D	G3DSA:1.10.472.10		coord: 161..275 score: 8.7E-8coord: 53..160 score: 1.2
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 72..160 score: 1.3
IPR013763	Cyclin-like	unknown	SSF47954	Cyclin-like	coord: 31..166 score: 4.02E-34coord: 151..270 score: 1.4
None	No IPR available	PANTHER	PTHR10177	CYCLINE	coord: 9..327 score: 4.0E
None	No IPR available	PANTHER	PTHR10177:SF224	SUBFAMILY NOT NAMED	coord: 9..327 score: 4.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa4G000660	Cla006448	Watermelon (97103) v1	cuwmB290
Csa4G000660	MELO3C018018	Melon (DHL92) v3.5.1	cumeB312
Csa4G000660	ClCG10G010100	Watermelon (Charleston Gray)	cuwcgB271
Csa4G000660	Lsi03G010110	Bottle gourd (USVL1VR-Ls)	culsiB275
Csa4G000660	MELO3C018018.2	Melon (DHL92) v3.6.1	cumedB297
Csa4G000660	Cla97C10G193090	Watermelon (97103) v2	cuwmbB271
Csa4G000660	Bhi11G000921	Wax gourd	cuwgoB356
Csa4G000660	CSPI04G00170	Wild cucumber (PI 183967)	cpicuB182
Csa4G000660	Cucsa.298420	Cucumber (Gy14) v1	cgycuB423
Csa4G000660	CmaCh04G004400	Cucurbita maxima (Rimu)	cmacuB709
Csa4G000660	CmaCh16G003100	Cucurbita maxima (Rimu)	cmacuB333
Csa4G000660	CmoCh16G003300	Cucurbita moschata (Rifu)	cmocuB322
Csa4G000660	CmoCh04G004700	Cucurbita moschata (Rifu)	cmocuB701
Csa4G000660	Cp4.1LG01g02780	Cucurbita pepo (Zucchini)	cpecuB402
Csa4G000660	Cp4.1LG14g04540	Cucurbita pepo (Zucchini)	cpecuB219
Csa4G000660	CsGy4G000180	Cucumber (Gy14) v2	cgybcuB165
Csa4G000660	Carg19695	Silver-seed gourd	carcuB0322
Csa4G000660	Carg08114	Silver-seed gourd	carcuB0402

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa4G000660	Cucumber (Chinese Long) v2	cucuB135
Csa4G000660	Cucumber (Chinese Long) v2	cucuB152
Csa4G000660	Cucumber (Gy14) v1	cgycuB495
Csa4G000660	Cucumber (Gy14) v2	cgybcuB176
Csa4G000660	Watermelon (97103) v2	cuwmbB289