Carg19695 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19695
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cyclin d protein
Location	Cucurbita_argyrosperma_scaffold_133 : 206887 .. 208854 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTCTCTCCTGACCAATCCCCCGCTTCTTCCTCCTCCTCTGGCCCCGCACGCCATGGCTCAACCGACTTGCTCTGTTCCACCGCCGTGGACTCCCTGATCTCCGATGACTCCGCCATTTTCAGCCTTCTTCAATCGGAGCTCGACCATATGCCCCGCCGCGACTACGTTCGACGGTGCCGTGACCGGTCGATCGACGTTATTGCTCGCCAAGACTCCATTAACTGGATCTTGAAGGTACTGGTCACTCCTCTTTTACGTCGCTGTTCTTCGCATTGATTTTCTTGTTTTTATCGATCGTCTAGGGTTTTGTAGGTCCACGCGCACTACAATTTCAAACCAGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTCCTCTCCGCTAATTTCCTTCCAGTTAAGAATCTTTTTCGATTTTCCCCTTGTTAATGTCGTCAATTGTTCAAGAATCTGATCGGAATTTTGAGGCGGATAGTTTAGGGATTTTATTTTTCTTGTTATTTGCAGCGGCGGAATGGATGGCCGTTTCAGCTTCTCGCGGTGGCGTGTTTGTCTTTAGCGGCGAAAATGGAGGAGCCTCTGGTCCCACTGCTTTTGGACCTCCAAATCTTTGAGCCTAAGTACGTCTTCGATCCCAAAACGGTTCAGAGAATGGAGCTTCGTGTCCTGTCTATTCTCAACTGGAGATTACGCGCCGTCACGCCTTTCGATTTTCTCCACCACTTCATCTCCGATCTTCCTCCTTCTTCCGCCGCAGACGGCGGCGAAGGCGACGGTGACGTCTCTCGTTGCCTCCTCTTCTCTACTTCTTCCGATCTCATTCTCAGCACTACACGCGGTACATTCGATAAAATCTGAAACCGATTCTGTTATCATATTCGATTACTTTTGTCTCCTTCTTCAATTTTGTGTTCTTAAAAAATGTTGGATTGATTTTCAGTGATCGATTTCTTGGGGTTTCCGCCGTGTACCATAGCCGCCGCCGCCGTTCTCACCGCCGCTGGTAAGCGGGTTGATTCTCCGGCGGTTTGTACCCATTTCCTTGCGGCAAACAGAGTCGTAAGTATTAATTCAATATCTGTGGGTTGGAAAAGGGATTTCATAATTCTGTAGGGGTTAATGTATAAATACAGAAAACCCCTTTTTTGGAAATTTATTTTAATTAAATTTCAGATTTTTTCTCAAGATATTCTTTATCATTTTCATTCTCTTTTTTTATTCACCAACATTTTGGATCTTGAGTTTGTTTTATTTATATTAATTAGGCTAAACTTCACAACTTAATTTCAAATTAAATTTAATCCTTATTTAGATTAATAGAATACAAGTTATTTAAAAAATATTAATATTCATTTTAAAGCTGAAATATTAATTTTCATCTTTTTTTAATTTTTATTAATAAAAATTTTAAAGGGTATTTTTATAATTTATCTTTTTAAGAACATGCATTTTTTTTTTATAATTATTGAGGTTAGTAATTTTTAAAAGCATAATTTAGAAGGATAATAATTTAATTAAAATAGCTCAACGATAATTAACCTCTTACATTTAAATTTTTATACCATTATTTATTTACTTTACCTCGAATTATAGTAACTTATGATATCAGAATTACTATTTATTTATTTACTTTGGTGGGAAATTGGAAAGCGTGAGAAATAAGAAGGAAGGAACGTAGGGTTTGGAGTCAAAATATTTTGCTGTCATTTTAATTTTAAAACAAATTTATTGGGAAAGGAAATGGTGAGAAGCTGTTACCAACTGATGGAGGAGTACATAATCGACACGTGTCCAGCAGACCTCCCAAAACAGCGGAGTCGAGGAGTCGAGCGACCGGCGCCAACTAGTCCAGTCGGCGTGCTAGAAGCGGCTGCATGCGGTAGCTGTGATACAGAAGCACCAGTGGAGCCGCCGACAAAGAGGCTTCGTTCCTCTGCACCGGATGTACAGGAGCAGTAG

mRNA sequence

ATGTCTCTCTCTCCTGACCAATCCCCCGCTTCTTCCTCCTCCTCTGGCCCCGCACGCCATGGCTCAACCGACTTGCTCTGTTCCACCGCCGTGGACTCCCTGATCTCCGATGACTCCGCCATTTTCAGCCTTCTTCAATCGGAGCTCGACCATATGCCCCGCCGCGACTACGTTCGACGGTGCCGTGACCGGTCGATCGACGTTATTGCTCGCCAAGACTCCATTAACTGGATCTTGAAGGTCCACGCGCACTACAATTTCAAACCAGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTCCTCTCCGCTAATTTCCTTCCACGGCGGAATGGATGGCCGTTTCAGCTTCTCGCGGTGGCGTGTTTGTCTTTAGCGGCGAAAATGGAGGAGCCTCTGGTCCCACTGCTTTTGGACCTCCAAATCTTTGAGCCTAAGTACGTCTTCGATCCCAAAACGGTTCAGAGAATGGAGCTTCGTGTCCTGTCTATTCTCAACTGGAGATTACGCGCCGTCACGCCTTTCGATTTTCTCCACCACTTCATCTCCGATCTTCCTCCTTCTTCCGCCGCAGACGGCGGCGAAGGCGACGGTGACGTCTCTCGTTGCCTCCTCTTCTCTACTTCTTCCGATCTCATTCTCAGCACTACACGCGTGATCGATTTCTTGGGGTTTCCGCCGTGTACCATAGCCGCCGCCGCCGTTCTCACCGCCGCTGGTAAGCGGGTTGATTCTCCGGCGGTTTGTACCCATTTCCTTGCGGCAAACAGAGTCGAAATGGTGAGAAGCTGTTACCAACTGATGGAGGAGTACATAATCGACACGTGTCCAGCAGACCTCCCAAAACAGCGGAGTCGAGGAGTCGAGCGACCGGCGCCAACTAGTCCAGTCGGCGTGCTAGAAGCGGCTGCATGCGGTAGCTGTGATACAGAAGCACCAGTGGAGCCGCCGACAAAGAGGCTTCGTTCCTCTGCACCGGATGTACAGGAGCAGTAG

Coding sequence (CDS)

ATGTCTCTCTCTCCTGACCAATCCCCCGCTTCTTCCTCCTCCTCTGGCCCCGCACGCCATGGCTCAACCGACTTGCTCTGTTCCACCGCCGTGGACTCCCTGATCTCCGATGACTCCGCCATTTTCAGCCTTCTTCAATCGGAGCTCGACCATATGCCCCGCCGCGACTACGTTCGACGGTGCCGTGACCGGTCGATCGACGTTATTGCTCGCCAAGACTCCATTAACTGGATCTTGAAGGTCCACGCGCACTACAATTTCAAACCAGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTCCTCTCCGCTAATTTCCTTCCACGGCGGAATGGATGGCCGTTTCAGCTTCTCGCGGTGGCGTGTTTGTCTTTAGCGGCGAAAATGGAGGAGCCTCTGGTCCCACTGCTTTTGGACCTCCAAATCTTTGAGCCTAAGTACGTCTTCGATCCCAAAACGGTTCAGAGAATGGAGCTTCGTGTCCTGTCTATTCTCAACTGGAGATTACGCGCCGTCACGCCTTTCGATTTTCTCCACCACTTCATCTCCGATCTTCCTCCTTCTTCCGCCGCAGACGGCGGCGAAGGCGACGGTGACGTCTCTCGTTGCCTCCTCTTCTCTACTTCTTCCGATCTCATTCTCAGCACTACACGCGTGATCGATTTCTTGGGGTTTCCGCCGTGTACCATAGCCGCCGCCGCCGTTCTCACCGCCGCTGGTAAGCGGGTTGATTCTCCGGCGGTTTGTACCCATTTCCTTGCGGCAAACAGAGTCGAAATGGTGAGAAGCTGTTACCAACTGATGGAGGAGTACATAATCGACACGTGTCCAGCAGACCTCCCAAAACAGCGGAGTCGAGGAGTCGAGCGACCGGCGCCAACTAGTCCAGTCGGCGTGCTAGAAGCGGCTGCATGCGGTAGCTGTGATACAGAAGCACCAGTGGAGCCGCCGACAAAGAGGCTTCGTTCCTCTGCACCGGATGTACAGGAGCAGTAG

Protein sequence

MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCDTEAPVEPPTKRLRSSAPDVQEQ

Homology

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BLAST of Carg19695 vs. NCBI nr
Match: XP_023552812.1 (cyclin-D2-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 641.0 bits (1652), Expect = 2.3e-180
Identity = 325/332 (97.89%), Postives = 327/332 (98.49%), Query Frame = 0


Query: 1   MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           MSLSPDQSPASSSSSGPARH S DLLCSTA DSLISDDSAIFSLLQSELDHMPRRDYVRR
Sbjct: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRR 60

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
           CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA
Sbjct: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
           VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLR VTPFDFLH
Sbjct: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLH 180

Query: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240
           HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA
Sbjct: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240

Query: 241 GKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGV 300
           G+RVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVE+PAPTSPVGV
Sbjct: 241 GERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPVGV 300

Query: 301 LEAAACGSCDTEAPVEPPTKRLRSSAPDVQEQ 333
           LEAAACGSCDTEA VEPPTKRLRSSAPDVQEQ
Sbjct: 301 LEAAACGSCDTEAAVEPPTKRLRSSAPDVQEQ 332

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BLAST of Carg19695 vs. NCBI nr
Match: XP_022922890.1 (cyclin-D2-1-like [Cucurbita moschata])

HSP 1 Score: 638.6 bits (1646), Expect = 1.1e-179
Identity = 324/332 (97.59%), Postives = 326/332 (98.19%), Query Frame = 0


Query: 1   MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           MSLSPDQSPASSSSS PARH S DLLCSTA DSLISDDSAIFSLLQSELDHMPRRDYVRR
Sbjct: 1   MSLSPDQSPASSSSSDPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRR 60

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
           CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA
Sbjct: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
           VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH
Sbjct: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180

Query: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240
           HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA
Sbjct: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240

Query: 241 GKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGV 300
           G+RVDSPAVCTHFL ANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGV +PAPTSPVGV
Sbjct: 241 GERVDSPAVCTHFLVANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVGQPAPTSPVGV 300

Query: 301 LEAAACGSCDTEAPVEPPTKRLRSSAPDVQEQ 333
           LEAAACGSCDTEAPVEPPTKRLRSSAPDVQEQ
Sbjct: 301 LEAAACGSCDTEAPVEPPTKRLRSSAPDVQEQ 332

[Close]

BLAST of Carg19695 vs. NCBI nr
Match: XP_022984738.1 (cyclin-D2-1-like [Cucurbita maxima])

HSP 1 Score: 623.2 bits (1606), Expect = 4.9e-175
Identity = 319/332 (96.08%), Postives = 322/332 (96.99%), Query Frame = 0


Query: 1   MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           MSLSPDQSPASSSSSGPARH S DLLCSTA DSLISDDSAIFSLLQSELDHMPRRDYVRR
Sbjct: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRR 60

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
           CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGW FQLLA
Sbjct: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWLFQLLA 120

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
           VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH
Sbjct: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180

Query: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240
           HFISDL PSSAA GGE DGD SRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTA 
Sbjct: 181 HFISDLLPSSAAYGGEVDGDGSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAV 240

Query: 241 GKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGV 300
           G+RVDSPAVCTHFLAANR+EMVRSCYQLMEEYIIDTCPADLPKQRSRGVE+PAPTSPVGV
Sbjct: 241 GERVDSPAVCTHFLAANRIEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPVGV 300

Query: 301 LEAAACGSCDTEAPVEPPTKRLRSSAPDVQEQ 333
           LEAAACGSCDTEA VEPPTKRLRSSAPDVQEQ
Sbjct: 301 LEAAACGSCDTEAAVEPPTKRLRSSAPDVQEQ 332

[Close]

BLAST of Carg19695 vs. NCBI nr
Match: XP_022991967.1 (cyclin-D2-2-like [Cucurbita maxima])

HSP 1 Score: 485.0 bits (1247), Expect = 2.1e-133
Identity = 263/346 (76.01%), Postives = 277/346 (80.06%), Query Frame = 0


Query: 1   MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           MSLSP  S ASS                       SDDSAIFSLLQSELDHMPRRDYV R
Sbjct: 1   MSLSPRHSAASS-----------------------SDDSAIFSLLQSELDHMPRRDYVLR 60

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
           CRDRSIDV AR DSINWILKVHAHYNFKPVTA LSVNYFDRFLS+NFLPRRNGWPFQLL+
Sbjct: 61  CRDRSIDVTARHDSINWILKVHAHYNFKPVTASLSVNYFDRFLSSNFLPRRNGWPFQLLS 120

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
           VACLSLAAKMEEP VPLLLDLQIFEP+YVF+PKTVQRMEL V+SILNWRLRAVTPFDFLH
Sbjct: 121 VACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLH 180

Query: 181 HFISDLPPSSAADGGEGDGDVSRC-LLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTA 240
           HFISDLP SSAADGG+ D D   C LLFS SSDLILSTTRVIDFLGF P  IAAAAVL A
Sbjct: 181 HFISDLPSSSAADGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCA 240

Query: 241 AGKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVG 300
           AG+R+DSPAVC HFL A+RVEMVRSC+QLMEEY+IDTCP  L KQR+   E+PAP SPVG
Sbjct: 241 AGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVG 300

Query: 301 VLEAAACGSCDTE------------AP-VEPPTKRLRSSAPDVQEQ 333
           VL+AAACGSCDT             AP  EP TKRLRSSAPDVQEQ
Sbjct: 301 VLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ 323

[Close]

BLAST of Carg19695 vs. NCBI nr
Match: XP_023524811.1 (cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.6 bits (1241), Expect = 1.0e-132
Identity = 260/346 (75.14%), Postives = 276/346 (79.77%), Query Frame = 0


Query: 1   MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           MSLSP QS ASS                       SDDS IF+LLQSELDHMPRRDYV R
Sbjct: 1   MSLSPHQSAASS-----------------------SDDSVIFTLLQSELDHMPRRDYVLR 60

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
           CRDRSIDV AR DSINWILKVHAHYNFKPVTAILSVNYFDRFLS+NFLPRRNGWPFQLL+
Sbjct: 61  CRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLS 120

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
           VACLSLAAKMEEP VPLLLDLQIFEP+YVF+PKTVQRMEL ++SILNWRLRAVTPFDFLH
Sbjct: 121 VACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLH 180

Query: 181 HFISDLPPSSAADGGEGDGDVSRC-LLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTA 240
           HFISD P SSA DGG+ D D   C LLFS SSDLILSTTRVIDFLGF P  IAAAAVL A
Sbjct: 181 HFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCA 240

Query: 241 AGKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVG 300
           AG+R+DSPAVC HFL A+RVEMVRSC+QLMEEY+IDTCP  L KQR+   E+PAP SPVG
Sbjct: 241 AGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVG 300

Query: 301 VLEAAACGSCDTE------------AP-VEPPTKRLRSSAPDVQEQ 333
           VL+AAACGSCDT             AP  EP TKRLRSSAPDVQEQ
Sbjct: 301 VLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ 323

[Close]

BLAST of Carg19695 vs. TAIR10
Match: AT1G70210.1 (CYCLIN D1;1)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-51
Identity = 126/290 (43.45%), Postives = 169/290 (58.28%), Query Frame = 0


Query: 1   MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           +S S D        SG     ST    S+ VDS   D  A F  ++ E   +P  DY+ R
Sbjct: 14  VSFSNDMDLFCGEDSGVFSGESTVDFSSSEVDSWPGDSIACF--IEDERHFVPGHDYLSR 73

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
            + RS+D  AR+DS+ WILKV A+YNF+P+TA L+VNY DRFL A  LP  +GWP QLLA
Sbjct: 74  FQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLA 133

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
           VACLSLAAKMEE LVP L D Q+   KY+F+ KT++RMEL VLS+L+WRLR+VTPFDF+ 
Sbjct: 134 VACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFIS 193

Query: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240
            F   + PS    G             S ++++ILS  +   FL + P +IAAAA+L  A
Sbjct: 194 FFAYKIDPSGTFLG----------FFISHATEIILSNIKEASFLEYWPSSIAAAAILCVA 253

Query: 241 GKRVDSPAVC-------THFLAANRVEMVRSCYQLMEEYIIDTCPADLPK 284
            +     +V        T     ++ ++VR CY+LM+   I+    + PK
Sbjct: 254 NELPSLSSVVNPHESPETWCDGLSKEKIVR-CYRLMKAMAIENNRLNTPK 290

[Close]

BLAST of Carg19695 vs. TAIR10
Match: AT2G22490.2 (Cyclin D2;1)

HSP 1 Score: 191.4 bits (485), Expect = 8.7e-49
Identity = 121/306 (39.54%), Postives = 180/306 (58.82%), Query Frame = 0


Query: 20  HGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWIL 79
           +GS  ++ S++  S +S+D  I  +L  E++  P  DYV+R     +D+  R  +++WIL
Sbjct: 49  NGSIPMMGSSS--SSLSED-RIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWIL 108

Query: 80  KVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLL 139
           KV AHY+F  +   LS+NY DRFL++  LP+   W  QLLAV+CLSLA+KMEE  VP ++
Sbjct: 109 KVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIV 168

Query: 140 DLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDG 199
           DLQ+ +PK+VF+ KT++RMEL V++ LNWRL+A+TPF F+ +F+  +            G
Sbjct: 169 DLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-----------SG 228

Query: 200 DVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA----GKRVDSPAVCTHFLA 259
            VS  L++  SS  IL+TT+ I+FL F P  IAAAA ++ +     + +D     +  + 
Sbjct: 229 HVSENLIY-RSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIY 288

Query: 260 ANRVEMVRSCYQLM-----EEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCD 317
             + E V+ C  LM     EE +  T    L ++++R   R  P SPVGVLEA       
Sbjct: 289 VKQQERVKRCLNLMRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEATCLSYRS 336

[Close]

BLAST of Carg19695 vs. TAIR10
Match: AT5G65420.3 (CYCLIN D4;1)

HSP 1 Score: 167.9 bits (424), Expect = 1.0e-41
Identity = 105/284 (36.97%), Postives = 158/284 (55.63%), Query Frame = 0


Query: 38  DSAIFSLLQSELDHMPRRDYVRRCRDRSIDV-IARQDSINWILKVHA----------HYN 97
           +  I  +++ E  H+P  DY++R R   +D+ + R+D++NWI K+             + 
Sbjct: 44  EEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREACEVHQ 103

Query: 98  FKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEP 157
           F P+   L++NY DRFLS + LP   GW  QLLAVACLSLAAK+EE  VP+L+DLQ+ +P
Sbjct: 104 FGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDP 163

Query: 158 KYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLL 217
           ++VF+ K+VQRMEL VL+ L WRLRA+TP  ++ +F+  +         + D + S  L+
Sbjct: 164 QFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM--------SKCDQEPSNTLI 223

Query: 218 FSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGK----RVDSPAVCTHFLAANRVEMV 277
            S S  +I STT+ IDFL F P  +AAA  L+ +G+      D+ +    F    + E V
Sbjct: 224 -SRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQK-ERV 283

Query: 278 RSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAAC 307
           +   +++E    D C                  +P GVLE +AC
Sbjct: 284 KKIGEMIESDGSDLC----------------SQTPNGVLEVSAC 301

[Close]

BLAST of Carg19695 vs. TAIR10
Match: AT5G10440.1 (cyclin d4;2)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-40
Identity = 92/236 (38.98%), Postives = 135/236 (57.20%), Query Frame = 0


Query: 35  ISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAIL 94
           +  +  +  +++ E  H PR DY++R R+  +D   R  ++ WI K      F P+   L
Sbjct: 33  LESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICL 92

Query: 95  SVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKT 154
           ++NY DRFLS + LP    W  QLLAVACLSLAAK+EE  VP L+ LQ+  P +VF+ K+
Sbjct: 93  AMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKS 152

Query: 155 VQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLI 214
           VQRMEL VL++L WRLRAVTP  ++ +F+S +          G        L + S  +I
Sbjct: 153 VQRMELLVLNVLRWRLRAVTPCSYVRYFLSKI---------NGYDQEPHSRLVTRSLQVI 212

Query: 215 LSTTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRSCYQLME 271
            STT+ IDFL F    IAAA  L+ +G+  D  +  + F +  + E V+   +++E
Sbjct: 213 ASTTKGIDFLEFRASEIAAAVALSVSGEHFDKFSFSSSFSSLEK-ERVKKIGEMIE 258

[Close]

BLAST of Carg19695 vs. TAIR10
Match: AT3G50070.1 (CYCLIN D3;3)

HSP 1 Score: 145.2 bits (365), Expect = 7.2e-35
Identity = 92/250 (36.80%), Postives = 133/250 (53.20%), Query Frame = 0


Query: 68  VIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLA 127
           V+ R+ +++WI KV +HY F  +TA+L+VNYFDRF+++        W  QL A+ACLSLA
Sbjct: 83  VLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLA 142

Query: 128 AKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLP 187
           AK+EE  VP LLD Q+ E +YVF+ KT+QRMEL VLS L+WR+  VTP  F  H I    
Sbjct: 143 AKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYS 202

Query: 188 PSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAG--KRVD 247
             S            +    S    L+LS      FL F P  +A A +++     K  D
Sbjct: 203 FKSH----------HQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCD 262

Query: 248 SPAVCTHFLAANRV--EMVRSCYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEA 307
                +  +   +V  E V  CY+L    ++D  P+   K+    +++PA  SP+GV +A
Sbjct: 263 EAVYQSQLMTLLKVDSEKVNKCYEL----VLDHSPS--KKRMMNWMQQPA--SPIGVFDA 314

Query: 308 AACGSCDTEA 314
           +       E+
Sbjct: 323 SFSSDSSNES 314

[Close]

BLAST of Carg19695 vs. Swiss-Prot
Match: sp|P42751|CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 199.9 bits (507), Expect = 4.4e-50
Identity = 126/290 (43.45%), Postives = 169/290 (58.28%), Query Frame = 0


Query: 1   MSLSPDQSPASSSSSGPARHGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           +S S D        SG     ST    S+ VDS   D  A F  ++ E   +P  DY+ R
Sbjct: 14  VSFSNDMDLFCGEDSGVFSGESTVDFSSSEVDSWPGDSIACF--IEDERHFVPGHDYLSR 73

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
            + RS+D  AR+DS+ WILKV A+YNF+P+TA L+VNY DRFL A  LP  +GWP QLLA
Sbjct: 74  FQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLA 133

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLH 180
           VACLSLAAKMEE LVP L D Q+   KY+F+ KT++RMEL VLS+L+WRLR+VTPFDF+ 
Sbjct: 134 VACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFIS 193

Query: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240
            F   + PS    G             S ++++ILS  +   FL + P +IAAAA+L  A
Sbjct: 194 FFAYKIDPSGTFLG----------FFISHATEIILSNIKEASFLEYWPSSIAAAAILCVA 253

Query: 241 GKRVDSPAVC-------THFLAANRVEMVRSCYQLMEEYIIDTCPADLPK 284
            +     +V        T     ++ ++VR CY+LM+   I+    + PK
Sbjct: 254 NELPSLSSVVNPHESPETWCDGLSKEKIVR-CYRLMKAMAIENNRLNTPK 290

[Close]

BLAST of Carg19695 vs. Swiss-Prot
Match: sp|Q6YXH8|CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 194.9 bits (494), Expect = 1.4e-48
Identity = 123/280 (43.93%), Postives = 162/280 (57.86%), Query Frame = 0


Query: 31  VDSLISDDSAIFSLLQSELDHMPRRDYVRRCR----DRSIDVIARQDSINWILKVHAHYN 90
           VD  +  +  +  L+++E DHMPR DY  R R    D  +D+  R D+I+WI KVH++Y+
Sbjct: 59  VDFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYS 118

Query: 91  FKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEP 150
           F P+TA L+VNY DRFLS   LP    W  QLLAVACLSLAAKMEE  VP  LDLQ+ E 
Sbjct: 119 FAPLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEE 178

Query: 151 KYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLL 210
           +YVF+ KT+QRMEL VLS L WR++AVTPF ++ +F+ +L      +GG+     S  L 
Sbjct: 179 RYVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLREL------NGGDPPSGRSALL- 238

Query: 211 FSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRSCY 270
              SS+LIL   R  + LGF P  IAAA      G   +  A  +H +   R+   +   
Sbjct: 239 ---SSELILCIARGTECLGFRPSEIAAAVAAAVVG---EEHAAFSH-VNKERMSHCQEVI 298

Query: 271 QLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAAC 307
           Q ME  +I   P+   +     V    P SP GVL+AA C
Sbjct: 299 QAME--LIHPKPSSPSRV---FVSSSIPRSPTGVLDAAGC 319

[Close]

BLAST of Carg19695 vs. Swiss-Prot
Match: sp|Q0J233|CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-46
Identity = 112/255 (43.92%), Postives = 149/255 (58.43%), Query Frame = 0


Query: 24  DLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHA 83
           D  CS   + L S  ++I  L+  E ++ PR DY  R R RSID  AR +S++WILKV  
Sbjct: 36  DECCSVGGEELYS-AASIAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQE 95

Query: 84  HYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQI 143
           +  F P+TA L+VNY DRFLS   LP   GW  QLLAVACLSLAAKMEE LVP LLDLQ+
Sbjct: 96  YNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQV 155

Query: 144 FEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSR 203
              +YVF+P+T+ RME  +L+ LNWRLR+VTPF F+  F                  +S 
Sbjct: 156 ECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACK--------------HISN 215

Query: 204 CLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGKRVD----SPAVCTHFLAANRV 263
            ++ + +SD        I FL   P ++AAAAVL A G+       +P +  ++      
Sbjct: 216 AMVQNANSD--------IQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAE 267

Query: 264 EMVRSCYQLMEEYII 275
           E + SCYQLM++ +I
Sbjct: 276 EGISSCYQLMQQLVI 267

[Close]

BLAST of Carg19695 vs. Swiss-Prot
Match: sp|P42752|CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 188.0 bits (476), Expect = 1.7e-46
Identity = 121/306 (39.54%), Postives = 180/306 (58.82%), Query Frame = 0


Query: 20  HGSTDLLCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWIL 79
           +GS  ++ S++  S +S+D  I  +L  E++  P  DYV+R     +D+  R  +++WIL
Sbjct: 49  NGSIPMMGSSS--SSLSED-RIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWIL 108

Query: 80  KVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLL 139
           KV AHY+F  +   LS+NY DRFL++  LP+   W  QLLAV+CLSLA+KMEE  VP ++
Sbjct: 109 KVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIV 168

Query: 140 DLQIFEPKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDG 199
           DLQ+ +PK+VF+ KT++RMEL V++ LNWRL+A+TPF F+ +F+  +            G
Sbjct: 169 DLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-----------SG 228

Query: 200 DVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA----GKRVDSPAVCTHFLA 259
            VS  L++  SS  IL+TT+ I+FL F P  IAAAA ++ +     + +D     +  + 
Sbjct: 229 HVSENLIY-RSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIY 288

Query: 260 ANRVEMVRSCYQLM-----EEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCD 317
             + E V+ C  LM     EE +  T    L ++++R   R  P SPVGVLEA       
Sbjct: 289 VKQ-ERVKRCLNLMRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEATCLSYRS 335

[Close]

BLAST of Carg19695 vs. Swiss-Prot
Match: sp|Q8LHA8|CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-45
Identity = 110/273 (40.29%), Postives = 157/273 (57.51%), Query Frame = 0


Query: 35  ISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAIL 94
           I  D  +  L++ E+DH P+R Y+ +     ++   R+D+I+WI KVH++YNF P++  L
Sbjct: 59  IDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYL 118

Query: 95  SVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKT 154
           +VNY DRFLS+  LP    W  QLL+V+CLSLA KMEE +VPL +DLQ+F+ +YVF+ + 
Sbjct: 119 AVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARH 178

Query: 155 VQRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLI 214
           ++RMEL V+  L WRL+AVTPF F+ +F+              +G      L S  SDL 
Sbjct: 179 IKRMELIVMKTLKWRLQAVTPFSFIGYFLDKF----------NEGKPPSYTLASWCSDLT 238

Query: 215 LSTTRVIDFLGFPPCTIAAAAVLTAAGKR---VDSPAVCTHFLAANRVEMVRSCYQLMEE 274
           + T +   FL F P  IAAA VL    +    V + A+    +  N+ EMV  CY+LM E
Sbjct: 239 VGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIPVNK-EMVMRCYELMVE 298

Query: 275 YIIDTCPADLPKQRSRGVERPAPTSPVGVLEAA 305
                  A + K R+       P SP+ VL+AA
Sbjct: 299 ------KALVKKIRNSNASSSVPHSPITVLDAA 314

[Close]

BLAST of Carg19695 vs. TrEMBL
Match: tr|A0A1S3BY27|A0A1S3BY27_CUCME (cyclin-D4-2-like OS=Cucumis melo OX=3656 GN=LOC103494823 PE=3 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.4e-130
Identity = 251/319 (78.68%), Postives = 271/319 (84.95%), Query Frame = 0


Query: 26  LCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHY 85
           LCS A D  ISDDS I +LLQSEL HMPR DY+RRCRD SIDV ARQDSINWILKVH+HY
Sbjct: 30  LCSYAPDFPISDDSPISTLLQSELHHMPRIDYLRRCRDHSIDVTARQDSINWILKVHSHY 89

Query: 86  NFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFE 145
           NFKPVTAILSVNYFDRFLS+N LPRRNGW FQLL+VACLSLAAKMEEP VPLLLDLQIFE
Sbjct: 90  NFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFE 149

Query: 146 PKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLP-PSSAADGGEGDGDVSRC 205
           PKYVF+PKTVQRMEL V+SILNWRLRAVTPFDFLHHFISDLP  SSAA+ G GD D S  
Sbjct: 150 PKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPTSSSAAESGRGDSDDSH- 209

Query: 206 LLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRS 265
            LFS+SSDLILSTTRVIDFL FPP TIAAAAVL AAG+R+DSP VCTHFLAANR+E V+S
Sbjct: 210 RLFSSSSDLILSTTRVIDFLEFPPSTIAAAAVLCAAGERLDSPVVCTHFLAANRIENVKS 269

Query: 266 CYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCDT----------EAP 325
           C+QLMEEY+IDTC A+L KQR  G E+PAP SPVGVL+AAACGSCDT          E P
Sbjct: 270 CHQLMEEYVIDTCTAELRKQRRIGEEQPAPPSPVGVLDAAACGSCDTRLDHPGSTSHEPP 329

Query: 326 VEP-PTKRLRSSAPDVQEQ 333
            EP P+KR+RSSAPDVQ Q
Sbjct: 330 AEPSPSKRIRSSAPDVQHQ 347

[Close]

BLAST of Carg19695 vs. TrEMBL
Match: tr|E5GBG8|E5GBG8_CUCME (Cyclin d protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 1.4e-130
Identity = 251/319 (78.68%), Postives = 271/319 (84.95%), Query Frame = 0


Query: 26  LCSTAVDSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHY 85
           LCS A D  ISDDS I +LLQSEL HMPR DY+RRCRD SIDV ARQDSINWILKVH+HY
Sbjct: 30  LCSYAPDFPISDDSPISTLLQSELHHMPRIDYLRRCRDHSIDVTARQDSINWILKVHSHY 89

Query: 86  NFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFE 145
           NFKPVTAILSVNYFDRFLS+N LPRRNGW FQLL+VACLSLAAKMEEP VPLLLDLQIFE
Sbjct: 90  NFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFE 149

Query: 146 PKYVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLP-PSSAADGGEGDGDVSRC 205
           PKYVF+PKTVQRMEL V+SILNWRLRAVTPFDFLHHFISDLP  SSAA+ G GD D S  
Sbjct: 150 PKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPTSSSAAESGRGDSDDSH- 209

Query: 206 LLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRS 265
            LFS+SSDLILSTTRVIDFL FPP TIAAAAVL AAG+R+DSP VCTHFLAANR+E V+S
Sbjct: 210 RLFSSSSDLILSTTRVIDFLEFPPSTIAAAAVLCAAGERLDSPVVCTHFLAANRIENVKS 269

Query: 266 CYQLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCDT----------EAP 325
           C+QLMEEY+IDTC A+L KQR  G E+PAP SPVGVL+AAACGSCDT          E P
Sbjct: 270 CHQLMEEYVIDTCTAELRKQRRIGEEQPAPPSPVGVLDAAACGSCDTRLDHPGSTSHEPP 329

Query: 326 VEP-PTKRLRSSAPDVQEQ 333
            EP P+KR+RSSAPDVQ Q
Sbjct: 330 AEPSPSKRIRSSAPDVQHQ 347

[Close]

BLAST of Carg19695 vs. TrEMBL
Match: tr|A0A0A0KSY9|A0A0A0KSY9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000660 PE=3 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 1.9e-127
Identity = 242/308 (78.57%), Postives = 265/308 (86.04%), Query Frame = 0


Query: 28  STAVDSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNF 87
           S+A D  +SDDS IF+LLQS+L HMPR DY+RRCRD SID+ ARQDSINWIL VH+HYNF
Sbjct: 24  SSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNF 83

Query: 88  KPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPK 147
           KPVTAILSVNYFDRFLS+N LPRRNGW FQLL+VACLSLAAKMEEP VPLLLDLQIFEPK
Sbjct: 84  KPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPK 143

Query: 148 YVFDPKTVQRMELRVLSILNWRLRAVTPFDFLHHFISDLP-PSSAADGGEGDGDVSRCLL 207
           YVF+PKTVQRMEL V+SILNWRLRAVTPFDFLHHFISDLP  SSAADGG GDGD S   L
Sbjct: 144 YVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSD-RL 203

Query: 208 FSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRSCY 267
           FS+SSDLILST RVIDFL FPP TIAAAAVL AAG+R++SPA C+HFLAANR+E V+SC 
Sbjct: 204 FSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQ 263

Query: 268 QLMEEYIIDTCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCDTEAPV--EPPTKRLRS 327
           QLMEEY+IDTC A+L KQR  G E PAP SPVGVL+AAAC SCD       EPP+KR+RS
Sbjct: 264 QLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLDAAACASCDNPGSTSHEPPSKRIRS 323

Query: 328 SAPDVQEQ 333
           SAPDVQ Q
Sbjct: 324 SAPDVQHQ 330

[Close]

BLAST of Carg19695 vs. TrEMBL
Match: tr|A0A061E0K0|A0A061E0K0_THECC (Cyclin d1,1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 197/303 (65.02%), Postives = 228/303 (75.25%), Query Frame = 0


Query: 36  SDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILS 95
           SD ++I  L+  E  HMP  DY+ R +DRSIDV ARQDSINWILKVHA+Y+F PVTA LS
Sbjct: 106 SDVNSISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLS 165

Query: 96  VNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTV 155
           VNYFDRFLS++ LP+ NGWPFQLL+VACLSLAAKMEEP VPLLLDLQ+FEP++ F+PKT+
Sbjct: 166 VNYFDRFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTI 225

Query: 156 QRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLIL 215
           QRMELRV++ LNWRLR+VTPFD+LHHFI  LP  S           S   + S SSDLIL
Sbjct: 226 QRMELRVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPN------SFSSVVSASSDLIL 285

Query: 216 STTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIID 275
           STTRVIDFLGF P TIAAAAVL AAG+  + PA    F      EMV SC+QLMEEY+ID
Sbjct: 286 STTRVIDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLID 345

Query: 276 TCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCDT-------EAPVEPPTKRLRSSAPD 332
           TCP+   K+  RG + PAP SPVGVL+AAACGSCDT        +  EPP KRLRSSAPD
Sbjct: 346 TCPSARLKE-LRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPD 401

[Close]

BLAST of Carg19695 vs. TrEMBL
Match: tr|A0A061E2C5|A0A061E2C5_THECC (Cyclin d1,1 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 197/303 (65.02%), Postives = 228/303 (75.25%), Query Frame = 0


Query: 36  SDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILS 95
           SD ++I  L+  E  HMP  DY+ R +DRSIDV ARQDSINWILKVHA+Y+F PVTA LS
Sbjct: 56  SDVNSISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLS 115

Query: 96  VNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTV 155
           VNYFDRFLS++ LP+ NGWPFQLL+VACLSLAAKMEEP VPLLLDLQ+FEP++ F+PKT+
Sbjct: 116 VNYFDRFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTI 175

Query: 156 QRMELRVLSILNWRLRAVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLIL 215
           QRMELRV++ LNWRLR+VTPFD+LHHFI  LP  S           S   + S SSDLIL
Sbjct: 176 QRMELRVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPN------SFSSVVSASSDLIL 235

Query: 216 STTRVIDFLGFPPCTIAAAAVLTAAGKRVDSPAVCTHFLAANRVEMVRSCYQLMEEYIID 275
           STTRVIDFLGF P TIAAAAVL AAG+  + PA    F      EMV SC+QLMEEY+ID
Sbjct: 236 STTRVIDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLID 295

Query: 276 TCPADLPKQRSRGVERPAPTSPVGVLEAAACGSCDT-------EAPVEPPTKRLRSSAPD 332
           TCP+   K+  RG + PAP SPVGVL+AAACGSCDT        +  EPP KRLRSSAPD
Sbjct: 296 TCPSARLKE-LRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPD 351

The following BLAST results are available for this feature:

BLAST of Carg19695 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023552812.1	2.3e-180	97.89	cyclin-D2-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922890.1	1.1e-179	97.59	cyclin-D2-1-like [Cucurbita moschata]	[more]
XP_022984738.1	4.9e-175	96.08	cyclin-D2-1-like [Cucurbita maxima]	[more]
XP_022991967.1	2.1e-133	76.01	cyclin-D2-2-like [Cucurbita maxima]	[more]
XP_023524811.1	1.0e-132	75.14	cyclin-D2-2-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg19695 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70210.1	2.5e-51	43.45	CYCLIN D1;1	[more]
AT2G22490.2	8.7e-49	39.54	Cyclin D2;1	[more]
AT5G65420.3	1.0e-41	36.97	CYCLIN D4;1	[more]
AT5G10440.1	2.5e-40	38.98	cyclin d4;2	[more]
AT3G50070.1	7.2e-35	36.80	CYCLIN D3;3	[more]

BLAST of Carg19695 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P42751\|CCD11_ARATH	4.4e-50	43.45	Cyclin-D1-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD1-1 PE=1 SV=3	[more]
sp\|Q6YXH8\|CCD41_ORYSJ	1.4e-48	43.93	Cyclin-D4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD4-1 PE=2 SV=2	[more]
sp\|Q0J233\|CCD21_ORYSJ	1.3e-46	43.92	Cyclin-D2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-1 PE=3 SV=2	[more]
sp\|P42752\|CCD21_ARATH	1.7e-46	39.54	Cyclin-D2-1 OS=Arabidopsis thaliana OX=3702 GN=CYCD2-1 PE=1 SV=3	[more]
sp\|Q8LHA8\|CCD22_ORYSJ	1.1e-45	40.29	Cyclin-D2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCD2-2 PE=2 SV=1	[more]

BLAST of Carg19695 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BY27\|A0A1S3BY27_CUCME	1.4e-130	78.68	cyclin-D4-2-like OS=Cucumis melo OX=3656 GN=LOC103494823 PE=3 SV=1	[more]
tr\|E5GBG8\|E5GBG8_CUCME	1.4e-130	78.68	Cyclin d protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
tr\|A0A0A0KSY9\|A0A0A0KSY9_CUCSA	1.9e-127	78.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000660 PE=3 SV=1	[more]
tr\|A0A061E0K0\|A0A061E0K0_THECC	2.1e-97	65.02	Cyclin d1,1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_007246 PE=3 SV=1	[more]
tr\|A0A061E2C5\|A0A061E2C5_THECC	2.1e-97	65.02	Cyclin d1,1 isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_007246 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **INTERPRO**
Term	Definition
IPR036915	Cyclin-like_sf
IPR039361	Cyclin
IPR006671	Cyclin_N
IPR004367	Cyclin_C-dom
IPR013763	Cyclin-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19695-RA	Carg19695-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 76..164 e-value: 6.7E-18 score: 75.5
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 71..163 e-value: 5.97953E-16 score: 70.7304
IPR004367	Cyclin, C-terminal domain	SMART	SM01332	Cyclin_C_2	coord: 173..310 e-value: 4.2E-6 score: 36.3
IPR004367	Cyclin, C-terminal domain	PFAM	PF02984	Cyclin_C	coord: 173..274 e-value: 4.5E-8 score: 33.1
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 43..53 e-value: 5.3E-48 score: 165.3 coord: 172..267 e-value: 5.3E-48 score: 165.3
None	No IPR available	GENE3D	G3DSA:1.10.472.10		coord: 54..171 e-value: 5.3E-48 score: 165.3
None	No IPR available	PIRSF	PIRSF001771	Cyclin_A_B_D_E	coord: 41..276 e-value: 5.9E-19 score: 66.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..332
None	No IPR available	PANTHER	PTHR10177:SF224	SUBFAMILY NOT NAMED	coord: 29..313
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 44..170 e-value: 1.7E-28 score: 98.8
IPR006671	Cyclin, N-terminal	PROSITE	PS00292	CYCLINS	coord: 71..102
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINE	coord: 29..313
IPR036915	Cyclin-like superfamily	SUPERFAMILY	SSF47954	Cyclin-like	coord: 36..170

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19695	Cla006448	Watermelon (97103) v1	carwmB0287
Carg19695	Csa4G000660	Cucumber (Chinese Long) v2	carcuB0322
Carg19695	MELO3C018018	Melon (DHL92) v3.5.1	carmeB0297
Carg19695	ClCG10G010100	Watermelon (Charleston Gray)	carwcgB0287
Carg19695	CSPI04G00170	Wild cucumber (PI 183967)	carcpiB0328
Carg19695	Cucsa.298420	Cucumber (Gy14) v1	carcgyB0346
Carg19695	CmaCh04G004400	Cucurbita maxima (Rimu)	carcmaB0408
Carg19695	CmaCh16G003100	Cucurbita maxima (Rimu)	carcmaB0406
Carg19695	CmoCh04G004700	Cucurbita moschata (Rifu)	carcmoB0403
Carg19695	CmoCh16G003300	Cucurbita moschata (Rifu)	carcmoB0402
Carg19695	Lsi03G010110	Bottle gourd (USVL1VR-Ls)	carlsiB269
Carg19695	Cp4.1LG14g04540	Cucurbita pepo (Zucchini)	carcpeB0407
Carg19695	Cp4.1LG01g02780	Cucurbita pepo (Zucchini)	carcpeB0408
Carg19695	CsGy4G000180	Cucumber (Gy14) v2	carcgybB0309
Carg19695	MELO3C018018.2	Melon (DHL92) v3.6.1	carmedB0308
Carg19695	CsaV3_4G000140	Cucumber (Chinese Long) v3	carcucB0328
Carg19695	Cla97C10G193090	Watermelon (97103) v2	carwmbB0302
Carg19695	Bhi11G000921	Wax gourd	carwgoB0381

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg19695	Carg08113	Silver-seed gourd	carcarB324

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19695	Wax gourd	carwgoB0383
Carg19695	Cucumber (Gy14) v1	carcgyB0344
Carg19695	Cucumber (Gy14) v1	carcgyB0348
Carg19695	Cucurbita maxima (Rimu)	carcmaB0405
Carg19695	Cucurbita maxima (Rimu)	carcmaB0407
Carg19695	Cucurbita moschata (Rifu)	carcmoB0401
Carg19695	Cucurbita pepo (Zucchini)	carcpeB0409
Carg19695	Wild cucumber (PI 183967)	carcpiB0329
Carg19695	Cucumber (Chinese Long) v2	carcuB0323
Carg19695	Cucumber (Chinese Long) v3	carcucB0329
Carg19695	Melon (DHL92) v3.5.1	carmeB0295
Carg19695	Melon (DHL92) v3.6.1	carmedB0306
Carg19695	Watermelon (Charleston Gray)	carwcgB0288
Carg19695	Watermelon (97103) v2	carwmbB0303
Carg19695	Watermelon (97103) v2	carwmbB0305