Cp4.1LG14g04540 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG14g04540
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCyclin d protein
LocationCp4.1LG14 : 1489945 .. 1492324 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACACTCACTGAGTGCAGACTATTGACTAAGTTCCATCCAAACCCATAAAGCCATGGTCATCCCTCACAAAAATCCCACCGCCGTCTCCTTCCTCCTCCTCCTCAATGCCGTCGCCACCGCCGGCCTTTCCTCTCCGCTGATCTCTCCAGTCCACAATGTCTCTCTCTCCTGACCAATCCCCCGCTTCTTCCTCCTCCTCTGGCCCTGCACGCCATGTCTCTGCCGACTTGCTCTGTTCCACCGCCGCGGACTCCCTGATCTCCGATGACTCCGCCATTTTCAGCCTTCTTCAATCGGAGCTCGACCATATGCCCCGCCGCGACTACGTTCGACGGTGCCGTGACCGGTCGATCGACGTTATTGCTCGCCAAGACTCCATTAACTGGATCTTGAAGGTACAGGTCACTCCTCTTTTACATCGCTGTTCTTCGCATTGATTTTCTTGTTTTTATCGATCGTCTAGGGTTTTGTAGGTCCACGCGCACTACAATTTCAAACCAGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTCCTCTCCGCTAATTTCCTTCCAGTTAAGAATCTTTTTCGATTTTCCCCTTGTTAATGTCGTCGATTGTTCAAGAATCTGATCGGAATTTTGAGGCGGATAGTTTAGGGATTTTATTTTTCTTGTTATTTGCAGCGGCGGAATGGATGGCCGTTTCAGCTTCTCGCGGTGGCGTGTTTGTCTTTAGCGGCGAAAATGGAGGAGCCTCTGGTCCCACTGCTTTTGGACCTCCAAATCTTTGAGCCTAAGTACGTCTTCGATCCCAAAACGGTTCAGAGAATGGAGCTTCGTGTCCTGTCTATTCTCAACTGGAGATTACGCGTCGTCACGCCTTTCGATTTTCTCCACCACTTCATTTCCGATCTTCCTCCTTCTTCCGCCGCAGACGGCGGCGAAGGCGACGGTGACGTCTCTCGTTGCCTCCTCTTCTCTACTTCTTCCGATCTCATTCTCAGCACTACACGCGGTACATCGATAAAAATCTGAAACCGATTCTGTTATCATATTCGATTACTTTTGTCGTCTTCTTTGATTTTGTGTTCTTAAAAAATGAATTTGGATTGATTTTCAGTGATCGATTTCTTGGGGTTTCCGCCGTGTACCATAGCCGCCGCCGCCGTTCTCACCGCCGCTGGTGAGCGGGTTGATTCTCCGGCGGTCTGTACCCATTTCCTTGCGGCAAACAGAGTCGTAAGTATTAATTCAATATCTGTGGGTTGGAAAAGGGATTTCATAATTCTGTAGGGGTTAATGTATAAATACAGAAAAACCCTTTTTTGGAAATTTATTTTAATTAAATTACGGATTTTTTCTCAAGATATTCTTTATCATTTTCTTTTTCTTTTTTTATTCACCAACATTTTGGATTTTGAGTTTGTTTTATTTAAATTAATTAGGCTAAACTCCACAACTTAATTTCAAATTAAATTTCATCCTTATTTAAATTAATAGAATAAAGTTATTTAAAAAATATTAATATTCATTTTAAAGCTGAAATATTAATTTTGATATTTTTTTTAATGAAAATTTTTAAAGGTATTTTTATAATTTATCTTTTAAGAACATGCATTTTTTTTTATAATTATTGAGGTTCGTAATTTTTAAAAGCATAATTTAGAAGGATAATAATTTAATTAACATACTCAGCGATAATTAACCTCTAACATTTAAATTTTTATACCATTATTTATTTATTTTAGCTTGAATTATAGTAACTTATTTTATAAGAAATTACTATTTATTTATTTACTTTGGTGGGAAATTGGAAAGCGTGAGAAATAAAAAGGAAGGAACGTAGGGTTTGGAGTCAAAATATTTTGCTGTCATTTTAATTTTAAAACAAATTTATTGGGAAAGGAAATGGTGAGAAGCTGTTACCAACTGATGGAGGAGTACATAATCGACACGTGTCCAGCAGACCTCCCAAAACAGCGGAGTCGAGGAGTCGAGCAACCGGCGCCAACTAGTCCAGTCGGCGTGCTAGAAGCGGCTGCATGCGGTAGCTGTGATACAGAAGCAGCAGTGGAGCCGCCGACAAAGAGGCTTCGTTCCTCTGCACCGGATGTACAGGAGCAGTAGATAAACCCTATTTCGTGTAATCTTGTAAGAGGGAGAAAGATCCTTTTTATTTCCCTCTCTCATTCCCTTGTCGTTGACCATTGAAATTGAACGGTTGAGATTGCACAGACGATGATCTCAACAAGGGAAAGGAAATTTTTTGTTGTTGTTTTCTTTGTTACTTATTTATTATAAAAAAAAAATACCATATTTCTGATCTTTTGGTTTTCGGGGGGTAAAATGGGAATATTATCAGTGAAGGCTAAAAAGTCAATAATTTATCAAT

mRNA sequence

CACACTCACTGAGTGCAGACTATTGACTAAGTTCCATCCAAACCCATAAAGCCATGGTCATCCCTCACAAAAATCCCACCGCCGTCTCCTTCCTCCTCCTCCTCAATGCCGTCGCCACCGCCGGCCTTTCCTCTCCGCTGATCTCTCCAGTCCACAATGTCTCTCTCTCCTGACCAATCCCCCGCTTCTTCCTCCTCCTCTGGCCCTGCACGCCATGTCTCTGCCGACTTGCTCTGTTCCACCGCCGCGGACTCCCTGATCTCCGATGACTCCGCCATTTTCAGCCTTCTTCAATCGGAGCTCGACCATATGCCCCGCCGCGACTACGTTCGACGGTGCCGTGACCGGTCGATCGACGTTATTGCTCGCCAAGACTCCATTAACTGGATCTTGAAGGTCCACGCGCACTACAATTTCAAACCAGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTCCTCTCCGCTAATTTCCTTCCACGGCGGAATGGATGGCCGTTTCAGCTTCTCGCGGTGGCGTGTTTGTCTTTAGCGGCGAAAATGGAGGAGCCTCTGGTCCCACTGCTTTTGGACCTCCAAATCTTTGAGCCTAAGTACGTCTTCGATCCCAAAACGGTTCAGAGAATGGAGCTTCGTGTCCTGTCTATTCTCAACTGGAGATTACGCGTCGTCACGCCTTTCGATTTTCTCCACCACTTCATTTCCGATCTTCCTCCTTCTTCCGCCGCAGACGGCGGCGAAGGCGACGGTGACGTCTCTCGTTGCCTCCTCTTCTCTACTTCTTCCGATCTCATTCTCAGCACTACACGCGTGATCGATTTCTTGGGGTTTCCGCCGTGTACCATAGCCGCCGCCGCCGTTCTCACCGCCGCTGGTGAGCGGGTTGATTCTCCGGCGGTCTGTACCCATTTCCTTGCGGCAAACAGAGTCGAAATGGTGAGAAGCTGTTACCAACTGATGGAGGAGTACATAATCGACACGTGTCCAGCAGACCTCCCAAAACAGCGGAGTCGAGGAGTCGAGCAACCGGCGCCAACTAGTCCAGTCGGCGTGCTAGAAGCGGCTGCATGCGGTAGCTGTGATACAGAAGCAGCAGTGGAGCCGCCGACAAAGAGGCTTCGTTCCTCTGCACCGGATGTACAGGAGCAGTAGATAAACCCTATTTCGTGTAATCTTGTAAGAGGGAGAAAGATCCTTTTTATTTCCCTCTCTCATTCCCTTGTCGTTGACCATTGAAATTGAACGGTTGAGATTGCACAGACGATGATCTCAACAAGGGAAAGGAAATTTTTTGTTGTTGTTTTCTTTGTTACTTATTTATTATAAAAAAAAAATACCATATTTCTGATCTTTTGGTTTTCGGGGGGTAAAATGGGAATATTATCAGTGAAGGCTAAAAAGTCAATAATTTATCAAT

Coding sequence (CDS)

ATGTCTCTCTCTCCTGACCAATCCCCCGCTTCTTCCTCCTCCTCTGGCCCTGCACGCCATGTCTCTGCCGACTTGCTCTGTTCCACCGCCGCGGACTCCCTGATCTCCGATGACTCCGCCATTTTCAGCCTTCTTCAATCGGAGCTCGACCATATGCCCCGCCGCGACTACGTTCGACGGTGCCGTGACCGGTCGATCGACGTTATTGCTCGCCAAGACTCCATTAACTGGATCTTGAAGGTCCACGCGCACTACAATTTCAAACCAGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTCCTCTCCGCTAATTTCCTTCCACGGCGGAATGGATGGCCGTTTCAGCTTCTCGCGGTGGCGTGTTTGTCTTTAGCGGCGAAAATGGAGGAGCCTCTGGTCCCACTGCTTTTGGACCTCCAAATCTTTGAGCCTAAGTACGTCTTCGATCCCAAAACGGTTCAGAGAATGGAGCTTCGTGTCCTGTCTATTCTCAACTGGAGATTACGCGTCGTCACGCCTTTCGATTTTCTCCACCACTTCATTTCCGATCTTCCTCCTTCTTCCGCCGCAGACGGCGGCGAAGGCGACGGTGACGTCTCTCGTTGCCTCCTCTTCTCTACTTCTTCCGATCTCATTCTCAGCACTACACGCGTGATCGATTTCTTGGGGTTTCCGCCGTGTACCATAGCCGCCGCCGCCGTTCTCACCGCCGCTGGTGAGCGGGTTGATTCTCCGGCGGTCTGTACCCATTTCCTTGCGGCAAACAGAGTCGAAATGGTGAGAAGCTGTTACCAACTGATGGAGGAGTACATAATCGACACGTGTCCAGCAGACCTCCCAAAACAGCGGAGTCGAGGAGTCGAGCAACCGGCGCCAACTAGTCCAGTCGGCGTGCTAGAAGCGGCTGCATGCGGTAGCTGTGATACAGAAGCAGCAGTGGAGCCGCCGACAAAGAGGCTTCGTTCCTCTGCACCGGATGTACAGGAGCAGTAG

Protein sequence

MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPVGVLEAAACGSCDTEAAVEPPTKRLRSSAPDVQEQ
Homology
[Close]
BLAST of Cp4.1LG14g04540 vs. Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 196.1 bits (497), Expect = 6.3e-49
Identity = 125/290 (43.10%), Postives = 166/290 (57.24%), Query Frame = 1 

Query: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           +S S D        SG     S     S+  DS   D  A F  ++ E   +P  DY+ R
Sbjct: 14  VSFSNDMDLFCGEDSGVFSGESTVDFSSSEVDSWPGDSIACF--IEDERHFVPGHDYLSR 73

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
            + RS+D  AR+DS+ WILKV A+YNF+P+TA L+VNY DRFL A  LP  +GWP QLLA
Sbjct: 74  FQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLA 133

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLH 180
           VACLSLAAKMEE LVP L D Q+   KY+F+ KT++RMEL VLS+L+WRLR VTPFDF+ 
Sbjct: 134 VACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFIS 193

Query: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240
            F   + PS    G             S ++++ILS  +   FL + P +IAAAA+L  A
Sbjct: 194 FFAYKIDPSGTFLG----------FFISHATEIILSNIKEASFLEYWPSSIAAAAILCVA 253

Query: 241 GERVDSPAVC-------THFLAANRVEMVRSCYQLMEEYIIDTCPADLPK 284
            E     +V        T     ++ ++VR CY+LM+   I+    + PK
Sbjct: 254 NELPSLSSVVNPHESPETWCDGLSKEKIVR-CYRLMKAMAIENNRLNTPK 290

[Close]
BLAST of Cp4.1LG14g04540 vs. Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 9.1e-48
Identity = 122/279 (43.73%), Postives = 160/279 (57.35%), Query Frame = 1 

Query: 32  DSLISDDSAIFSLLQSELDHMPRRDYVRRCR----DRSIDVIARQDSINWILKVHAHYNF 91
           D  +  +  +  L+++E DHMPR DY  R R    D  +D+  R D+I+WI KVH++Y+F
Sbjct: 60  DFAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSF 119

Query: 92  KPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPK 151
            P+TA L+VNY DRFLS   LP    W  QLLAVACLSLAAKMEE  VP  LDLQ+ E +
Sbjct: 120 APLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEER 179

Query: 152 YVFDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLF 211
           YVF+ KT+QRMEL VLS L WR++ VTPF ++ +F+ +L      +GG+     S  L  
Sbjct: 180 YVFEAKTIQRMELLVLSTLKWRMQAVTPFSYVDYFLREL------NGGDPPSGRSALL-- 239

Query: 212 STSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGERVDSPAVCTHFLAANRVEMVRSCYQ 271
             SS+LIL   R  + LGF P  IAAA      GE     A  +H +   R+   +   Q
Sbjct: 240 --SSELILCIARGTECLGFRPSEIAAAVAAAVVGE---EHAAFSH-VNKERMSHCQEVIQ 299

Query: 272 LMEEYIIDTCPADLPKQRSRGVEQPAPTSPVGVLEAAAC 307
            ME  +I   P+   +     V    P SP GVL+AA C
Sbjct: 300 AME--LIHPKPSSPSRV---FVSSSIPRSPTGVLDAAGC 319

[Close]
BLAST of Cp4.1LG14g04540 vs. Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 7.7e-47
Identity = 114/255 (44.71%), Postives = 147/255 (57.65%), Query Frame = 1 

Query: 24  DLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHA 83
           D  CS   + L S  S I  L+  E ++ PR DY  R R RSID  AR +S++WILKV  
Sbjct: 36  DECCSVGGEELYSAAS-IAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQE 95

Query: 84  HYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQI 143
           +  F P+TA L+VNY DRFLS   LP   GW  QLLAVACLSLAAKMEE LVP LLDLQ+
Sbjct: 96  YNGFLPLTAYLAVNYMDRFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQV 155

Query: 144 FEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSR 203
              +YVF+P+T+ RME  +L+ LNWRLR VTPF F+  F                  +S 
Sbjct: 156 ECSRYVFEPRTICRMEFLILTALNWRLRSVTPFTFIDFFACK--------------HISN 215

Query: 204 CLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGERVD----SPAVCTHFLAANRV 263
            ++ + +SD        I FL   P ++AAAAVL A GE       +P +  ++      
Sbjct: 216 AMVQNANSD--------IQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAE 267

Query: 264 EMVRSCYQLMEEYII 275
           E + SCYQLM++ +I
Sbjct: 276 EGISSCYQLMQQLVI 267

[Close]
BLAST of Cp4.1LG14g04540 vs. Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-46
Identity = 122/308 (39.61%), Postives = 179/308 (58.12%), Query Frame = 1 

Query: 30  AADSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKP 89
           ++ S +S+D  I  +L  E++  P  DYV+R     +D+  R  +++WILKV AHY+F  
Sbjct: 57  SSSSSLSEDR-IKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGH 116

Query: 90  VTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYV 149
           +   LS+NY DRFL++  LP+   W  QLLAV+CLSLA+KMEE  VP ++DLQ+ +PK+V
Sbjct: 117 LCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFV 176

Query: 150 FDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFST 209
           F+ KT++RMEL V++ LNWRL+ +TPF F+ +F+  +            G VS  L++  
Sbjct: 177 FEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-----------SGHVSENLIY-R 236

Query: 210 SSDLILSTTRVIDFLGFPPCTIAAAAVLTAA----GERVDSPAVCTHFLAANRVEMVRSC 269
           SS  IL+TT+ I+FL F P  IAAAA ++ +     E +D     +  +   + E V+ C
Sbjct: 237 SSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQ-ERVKRC 296

Query: 270 YQLM-----EEYIIDTCPADLPKQRSRGVEQPAPTSPVGVLEAAACGSCDTEAAVEPPTK 329
             LM     EE +  T    L ++++R   +  P SPVGVLEA        E  VE  T 
Sbjct: 297 LNLMRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEATCLSYRSEERTVESCTN 346

[Close]
BLAST of Cp4.1LG14g04540 vs. Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-45
Identity = 110/273 (40.29%), Postives = 156/273 (57.14%), Query Frame = 1 

Query: 35  ISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAIL 94
           I  D  +  L++ E+DH P+R Y+ +     ++   R+D+I+WI KVH++YNF P++  L
Sbjct: 59  IDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYL 118

Query: 95  SVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKT 154
           +VNY DRFLS+  LP    W  QLL+V+CLSLA KMEE +VPL +DLQ+F+ +YVF+ + 
Sbjct: 119 AVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARH 178

Query: 155 VQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLI 214
           ++RMEL V+  L WRL+ VTPF F+ +F+              +G      L S  SDL 
Sbjct: 179 IKRMELIVMKTLKWRLQAVTPFSFIGYFLDKF----------NEGKPPSYTLASWCSDLT 238

Query: 215 LSTTRVIDFLGFPPCTIAAAAVLTAAGER---VDSPAVCTHFLAANRVEMVRSCYQLMEE 274
           + T +   FL F P  IAAA VL    E    V + A+    +  N+ EMV  CY+LM E
Sbjct: 239 VGTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIPVNK-EMVMRCYELMVE 298

Query: 275 YIIDTCPADLPKQRSRGVEQPAPTSPVGVLEAA 305
                  A + K R+       P SP+ VL+AA
Sbjct: 299 ------KALVKKIRNSNASSSVPHSPITVLDAA 314

[Close]
BLAST of Cp4.1LG14g04540 vs. TrEMBL
Match: E5GBG8_CUCME (Cyclin d protein OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.4e-132
Identity = 265/348 (76.15%), Postives = 285/348 (81.90%), Query Frame = 1 

Query: 1   MSLSPDQ-SPASSSSSGPARHVSAD---LLCSTAADSLISDDSAIFSLLQSELDHMPRRD 60
           MSLSP   SPASSSSS  +   S+     LCS A D  ISDDS I +LLQSEL HMPR D
Sbjct: 1   MSLSPHHHSPASSSSSSSSSSSSSSSSHFLCSYAPDFPISDDSPISTLLQSELHHMPRID 60

Query: 61  YVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPF 120
           Y+RRCRD SIDV ARQDSINWILKVH+HYNFKPVTAILSVNYFDRFLS+N LPRRNGW F
Sbjct: 61  YLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120

Query: 121 QLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPF 180
           QLL+VACLSLAAKMEEP VPLLLDLQIFEPKYVF+PKTVQRMEL V+SILNWRLR VTPF
Sbjct: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180

Query: 181 DFLHHFISDLP-PSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAA 240
           DFLHHFISDLP  SSAA+ G GD D S   LFS+SSDLILSTTRVIDFL FPP TIAAAA
Sbjct: 181 DFLHHFISDLPTSSSAAESGRGDSDDSH-RLFSSSSDLILSTTRVIDFLEFPPSTIAAAA 240

Query: 241 VLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPT 300
           VL AAGER+DSP VCTHFLAANR+E V+SC+QLMEEY+IDTC A+L KQR  G EQPAP 
Sbjct: 241 VLCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYVIDTCTAELRKQRRIGEEQPAPP 300

Query: 301 SPVGVLEAAACGSCDT----------EAAVEP-PTKRLRSSAPDVQEQ 333
           SPVGVL+AAACGSCDT          E   EP P+KR+RSSAPDVQ Q
Sbjct: 301 SPVGVLDAAACGSCDTRLDHPGSTSHEPPAEPSPSKRIRSSAPDVQHQ 347

[Close]
BLAST of Cp4.1LG14g04540 vs. TrEMBL
Match: A0A0A0KSY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000660 PE=3 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 5.4e-132
Identity = 258/336 (76.79%), Postives = 283/336 (84.23%), Query Frame = 1 

Query: 1   MSLSPDQ-SPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVR 60
           MSLSP   SPASSSSS      S+  LCS+A D  +SDDS IF+LLQS+L HMPR DY+R
Sbjct: 1   MSLSPHHHSPASSSSSS-----SSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLR 60

Query: 61  RCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLL 120
           RCRD SID+ ARQDSINWIL VH+HYNFKPVTAILSVNYFDRFLS+N LPRRNGW FQLL
Sbjct: 61  RCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLL 120

Query: 121 AVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFL 180
           +VACLSLAAKMEEP VPLLLDLQIFEPKYVF+PKTVQRMEL V+SILNWRLR VTPFDFL
Sbjct: 121 SVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFL 180

Query: 181 HHFISDLP-PSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLT 240
           HHFISDLP  SSAADGG GDGD S   LFS+SSDLILST RVIDFL FPP TIAAAAVL 
Sbjct: 181 HHFISDLPSSSSAADGGRGDGDDSD-RLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLC 240

Query: 241 AAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPV 300
           AAGER++SPA C+HFLAANR+E V+SC QLMEEY+IDTC A+L KQR  G E+PAP SPV
Sbjct: 241 AAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPV 300

Query: 301 GVLEAAACGSCDTEAAV--EPPTKRLRSSAPDVQEQ 333
           GVL+AAAC SCD   +   EPP+KR+RSSAPDVQ Q
Sbjct: 301 GVLDAAACASCDNPGSTSHEPPSKRIRSSAPDVQHQ 330

[Close]
BLAST of Cp4.1LG14g04540 vs. TrEMBL
Match: A0A061E0K0_THECC (Cyclin d1,1 isoform 1 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.4e-97
Identity = 209/358 (58.38%), Postives = 243/358 (67.88%), Query Frame = 1 

Query: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLI--------------------SDDSA 60
           MSLS   +  ++SS   A   S  L C   A  ++                    SD ++
Sbjct: 51  MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 110

Query: 61  IFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFD 120
           I  L+  E  HMP  DY+ R +DRSIDV ARQDSINWILKVHA+Y+F PVTA LSVNYFD
Sbjct: 111 ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 170

Query: 121 RFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMEL 180
           RFLS++ LP+ NGWPFQLL+VACLSLAAKMEEP VPLLLDLQ+FEP++ F+PKT+QRMEL
Sbjct: 171 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 230

Query: 181 RVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRV 240
           RV++ LNWRLR VTPFD+LHHFI  LP  S           S   + S SSDLILSTTRV
Sbjct: 231 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPN------SFSSVVSASSDLILSTTRV 290

Query: 241 IDFLGFPPCTIAAAAVLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPAD 300
           IDFLGF P TIAAAAVL AAGE  + PA    F      EMV SC+QLMEEY+IDTCP+ 
Sbjct: 291 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 350

Query: 301 LPKQRSRGVEQPAPTSPVGVLEAAACGSCDT-------EAAVEPPTKRLRSSAPDVQE 332
             K+  RG + PAP SPVGVL+AAACGSCDT        +  EPP KRLRSSAPDVQ+
Sbjct: 351 RLKE-LRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQQ 401

[Close]
BLAST of Cp4.1LG14g04540 vs. TrEMBL
Match: A0A061E2C5_THECC (Cyclin d1,1 isoform 2 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.4e-97
Identity = 209/358 (58.38%), Postives = 243/358 (67.88%), Query Frame = 1 

Query: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLI--------------------SDDSA 60
           MSLS   +  ++SS   A   S  L C   A  ++                    SD ++
Sbjct: 1   MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 60

Query: 61  IFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFD 120
           I  L+  E  HMP  DY+ R +DRSIDV ARQDSINWILKVHA+Y+F PVTA LSVNYFD
Sbjct: 61  ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 120

Query: 121 RFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMEL 180
           RFLS++ LP+ NGWPFQLL+VACLSLAAKMEEP VPLLLDLQ+FEP++ F+PKT+QRMEL
Sbjct: 121 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 180

Query: 181 RVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRV 240
           RV++ LNWRLR VTPFD+LHHFI  LP  S           S   + S SSDLILSTTRV
Sbjct: 181 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPN------SFSSVVSASSDLILSTTRV 240

Query: 241 IDFLGFPPCTIAAAAVLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPAD 300
           IDFLGF P TIAAAAVL AAGE  + PA    F      EMV SC+QLMEEY+IDTCP+ 
Sbjct: 241 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 300

Query: 301 LPKQRSRGVEQPAPTSPVGVLEAAACGSCDT-------EAAVEPPTKRLRSSAPDVQE 332
             K+  RG + PAP SPVGVL+AAACGSCDT        +  EPP KRLRSSAPDVQ+
Sbjct: 301 RLKE-LRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQQ 351

[Close]
BLAST of Cp4.1LG14g04540 vs. TrEMBL
Match: M5VWB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024287mg PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.2e-96
Identity = 205/340 (60.29%), Postives = 247/340 (72.65%), Query Frame = 1 

Query: 10  ASSSSSGPARHVSADLLCST--AADSLISDDSA--IFSLLQSELDHMPRRDYVRRCRDRS 69
           +SSSSS  + + +++ + S+  +  S  +DD+A  +  L+ SEL+HMP  +Y+ R RDRS
Sbjct: 2   SSSSSSSSSSYDTSNFVVSSHHSPPSDETDDTATILTRLIDSELNHMPSPNYISRLRDRS 61

Query: 70  IDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNG-WPFQLLAVACL 129
           IDV ARQDSINWILKVHAHY F P+TA LS+NYFDRFLS++ LP+ NG WPFQLL+VACL
Sbjct: 62  IDVTARQDSINWILKVHAHYRFSPLTAFLSINYFDRFLSSHSLPQHNGYWPFQLLSVACL 121

Query: 130 SLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFIS 189
           SLAAKMEEP VP +LDLQIFEPK+VF+P+TVQRMELRV++ILNWRLR +TPFDFLHHFI+
Sbjct: 122 SLAAKMEEPNVPFILDLQIFEPKFVFEPRTVQRMELRVMTILNWRLRSITPFDFLHHFIA 181

Query: 190 DLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGERV 249
           +LP SS++             LFS SSDLILSTTRVIDFLGF P TIAAAAVL AA + V
Sbjct: 182 NLPSSSSSS------------LFSASSDLILSTTRVIDFLGFSPSTIAAAAVLCAAEKSV 241

Query: 250 ------DSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPV 309
                 DS A  + F      E  RSC+QLMEEY+IDTCP+   K+   G    +P SPV
Sbjct: 242 DFAAAEDSDAAASLFHERVNKEGARSCHQLMEEYLIDTCPSSRHKEPVVGTASSSPASPV 301

Query: 310 GVLEAAACGSCDTEA-------AVEPPTKRLR-SSAPDVQ 331
           GVL+AAACGSCDT +         EPP KRLR SSA DVQ
Sbjct: 302 GVLDAAACGSCDTRSENPGSTVEAEPPAKRLRPSSAADVQ 329

[Close]
BLAST of Cp4.1LG14g04540 vs. TAIR10
Match: AT1G70210.1 (AT1G70210.1 CYCLIN D1;1)

HSP 1 Score: 196.1 bits (497), Expect = 3.5e-50
Identity = 125/290 (43.10%), Postives = 166/290 (57.24%), Query Frame = 1 

Query: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVRR 60
           +S S D        SG     S     S+  DS   D  A F  ++ E   +P  DY+ R
Sbjct: 14  VSFSNDMDLFCGEDSGVFSGESTVDFSSSEVDSWPGDSIACF--IEDERHFVPGHDYLSR 73

Query: 61  CRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLA 120
            + RS+D  AR+DS+ WILKV A+YNF+P+TA L+VNY DRFL A  LP  +GWP QLLA
Sbjct: 74  FQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLA 133

Query: 121 VACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLH 180
           VACLSLAAKMEE LVP L D Q+   KY+F+ KT++RMEL VLS+L+WRLR VTPFDF+ 
Sbjct: 134 VACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFIS 193

Query: 181 HFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAA 240
            F   + PS    G             S ++++ILS  +   FL + P +IAAAA+L  A
Sbjct: 194 FFAYKIDPSGTFLG----------FFISHATEIILSNIKEASFLEYWPSSIAAAAILCVA 253

Query: 241 GERVDSPAVC-------THFLAANRVEMVRSCYQLMEEYIIDTCPADLPK 284
            E     +V        T     ++ ++VR CY+LM+   I+    + PK
Sbjct: 254 NELPSLSSVVNPHESPETWCDGLSKEKIVR-CYRLMKAMAIENNRLNTPK 290

[Close]
BLAST of Cp4.1LG14g04540 vs. TAIR10
Match: AT2G22490.2 (AT2G22490.2 Cyclin D2;1)

HSP 1 Score: 192.2 bits (487), Expect = 5.1e-49
Identity = 122/308 (39.61%), Postives = 179/308 (58.12%), Query Frame = 1 

Query: 30  AADSLISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKP 89
           ++ S +S+D  I  +L  E++  P  DYV+R     +D+  R  +++WILKV AHY+F  
Sbjct: 57  SSSSSLSEDR-IKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGH 116

Query: 90  VTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYV 149
           +   LS+NY DRFL++  LP+   W  QLLAV+CLSLA+KMEE  VP ++DLQ+ +PK+V
Sbjct: 117 LCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFV 176

Query: 150 FDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFST 209
           F+ KT++RMEL V++ LNWRL+ +TPF F+ +F+  +            G VS  L++  
Sbjct: 177 FEAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-----------SGHVSENLIY-R 236

Query: 210 SSDLILSTTRVIDFLGFPPCTIAAAAVLTAA----GERVDSPAVCTHFLAANRVEMVRSC 269
           SS  IL+TT+ I+FL F P  IAAAA ++ +     E +D     +  +   + E V+ C
Sbjct: 237 SSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQQERVKRC 296

Query: 270 YQLM-----EEYIIDTCPADLPKQRSRGVEQPAPTSPVGVLEAAACGSCDTEAAVEPPTK 329
             LM     EE +  T    L ++++R   +  P SPVGVLEA        E  VE  T 
Sbjct: 297 LNLMRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEATCLSYRSEERTVESCTN 347

[Close]
BLAST of Cp4.1LG14g04540 vs. TAIR10
Match: AT5G65420.3 (AT5G65420.3 CYCLIN D4;1)

HSP 1 Score: 167.5 bits (423), Expect = 1.3e-41
Identity = 105/284 (36.97%), Postives = 157/284 (55.28%), Query Frame = 1 

Query: 38  DSAIFSLLQSELDHMPRRDYVRRCRDRSIDV-IARQDSINWILKVHAH----------YN 97
           +  I  +++ E  H+P  DY++R R   +D+ + R+D++NWI K+             + 
Sbjct: 44  EEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCRTDREACEVHQ 103

Query: 98  FKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEP 157
           F P+   L++NY DRFLS + LP   GW  QLLAVACLSLAAK+EE  VP+L+DLQ+ +P
Sbjct: 104 FGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDP 163

Query: 158 KYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLL 217
           ++VF+ K+VQRMEL VL+ L WRLR +TP  ++ +F+  +         + D + S  L+
Sbjct: 164 QFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM--------SKCDQEPSNTLI 223

Query: 218 FSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGE----RVDSPAVCTHFLAANRVEMV 277
            S S  +I STT+ IDFL F P  +AAA  L+ +GE      D+ +    F    + E V
Sbjct: 224 -SRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSPLFSLLQK-ERV 283

Query: 278 RSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPVGVLEAAAC 307
           +   +++E    D C                  +P GVLE +AC
Sbjct: 284 KKIGEMIESDGSDLC----------------SQTPNGVLEVSAC 301

[Close]
BLAST of Cp4.1LG14g04540 vs. TAIR10
Match: AT5G10440.1 (AT5G10440.1 cyclin d4;2)

HSP 1 Score: 162.9 bits (411), Expect = 3.3e-40
Identity = 92/236 (38.98%), Postives = 134/236 (56.78%), Query Frame = 1 

Query: 35  ISDDSAIFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAIL 94
           +  +  +  +++ E  H PR DY++R R+  +D   R  ++ WI K      F P+   L
Sbjct: 33  LESEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICL 92

Query: 95  SVNYFDRFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKT 154
           ++NY DRFLS + LP    W  QLLAVACLSLAAK+EE  VP L+ LQ+  P +VF+ K+
Sbjct: 93  AMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKS 152

Query: 155 VQRMELRVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLI 214
           VQRMEL VL++L WRLR VTP  ++ +F+S +          G        L + S  +I
Sbjct: 153 VQRMELLVLNVLRWRLRAVTPCSYVRYFLSKI---------NGYDQEPHSRLVTRSLQVI 212

Query: 215 LSTTRVIDFLGFPPCTIAAAAVLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLME 271
            STT+ IDFL F    IAAA  L+ +GE  D  +  + F +  + E V+   +++E
Sbjct: 213 ASTTKGIDFLEFRASEIAAAVALSVSGEHFDKFSFSSSFSSLEK-ERVKKIGEMIE 258

[Close]
BLAST of Cp4.1LG14g04540 vs. TAIR10
Match: AT3G50070.1 (AT3G50070.1 CYCLIN D3;3)

HSP 1 Score: 145.6 bits (366), Expect = 5.5e-35
Identity = 95/262 (36.26%), Postives = 138/262 (52.67%), Query Frame = 1 

Query: 68  VIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLLAVACLSLA 127
           V+ R+ +++WI KV +HY F  +TA+L+VNYFDRF+++        W  QL A+ACLSLA
Sbjct: 83  VLCREKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLA 142

Query: 128 AKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFISDLP 187
           AK+EE  VP LLD Q+ E +YVF+ KT+QRMEL VLS L+WR+  VTP  F  H I    
Sbjct: 143 AKVEEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYS 202

Query: 188 PSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGE--RVD 247
             S            +    S    L+LS      FL F P  +A A +++   +    D
Sbjct: 203 FKSH----------HQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCD 262

Query: 248 SPAVCTHFLAANRV--EMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPVGVLEA 307
                +  +   +V  E V  CY+L    ++D  P+   K+    ++QPA  SP+GV +A
Sbjct: 263 EAVYQSQLMTLLKVDSEKVNKCYEL----VLDHSPS--KKRMMNWMQQPA--SPIGVFDA 322

Query: 308 AACGSCDTEAAVEPPTKRLRSS 326
           +       E+ V   +  + SS
Sbjct: 323 SFSSDSSNESWVVSASASVSSS 326

[Close]
BLAST of Cp4.1LG14g04540 vs. NCBI nr
Match: gi|659108835|ref|XP_008454410.1| (PREDICTED: cyclin-D4-2-like [Cucumis melo])

HSP 1 Score: 480.7 bits (1236), Expect = 2.0e-132
Identity = 265/348 (76.15%), Postives = 285/348 (81.90%), Query Frame = 1 

Query: 1   MSLSPDQ-SPASSSSSGPARHVSAD---LLCSTAADSLISDDSAIFSLLQSELDHMPRRD 60
           MSLSP   SPASSSSS  +   S+     LCS A D  ISDDS I +LLQSEL HMPR D
Sbjct: 1   MSLSPHHHSPASSSSSSSSSSSSSSSSHFLCSYAPDFPISDDSPISTLLQSELHHMPRID 60

Query: 61  YVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPF 120
           Y+RRCRD SIDV ARQDSINWILKVH+HYNFKPVTAILSVNYFDRFLS+N LPRRNGW F
Sbjct: 61  YLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAF 120

Query: 121 QLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPF 180
           QLL+VACLSLAAKMEEP VPLLLDLQIFEPKYVF+PKTVQRMEL V+SILNWRLR VTPF
Sbjct: 121 QLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPF 180

Query: 181 DFLHHFISDLP-PSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAA 240
           DFLHHFISDLP  SSAA+ G GD D S   LFS+SSDLILSTTRVIDFL FPP TIAAAA
Sbjct: 181 DFLHHFISDLPTSSSAAESGRGDSDDSH-RLFSSSSDLILSTTRVIDFLEFPPSTIAAAA 240

Query: 241 VLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPT 300
           VL AAGER+DSP VCTHFLAANR+E V+SC+QLMEEY+IDTC A+L KQR  G EQPAP 
Sbjct: 241 VLCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYVIDTCTAELRKQRRIGEEQPAPP 300

Query: 301 SPVGVLEAAACGSCDT----------EAAVEP-PTKRLRSSAPDVQEQ 333
           SPVGVL+AAACGSCDT          E   EP P+KR+RSSAPDVQ Q
Sbjct: 301 SPVGVLDAAACGSCDTRLDHPGSTSHEPPAEPSPSKRIRSSAPDVQHQ 347

[Close]
BLAST of Cp4.1LG14g04540 vs. NCBI nr
Match: gi|449465087|ref|XP_004150260.1| (PREDICTED: cyclin-D4-1-like [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 7.8e-132
Identity = 258/336 (76.79%), Postives = 283/336 (84.23%), Query Frame = 1 

Query: 1   MSLSPDQ-SPASSSSSGPARHVSADLLCSTAADSLISDDSAIFSLLQSELDHMPRRDYVR 60
           MSLSP   SPASSSSS      S+  LCS+A D  +SDDS IF+LLQS+L HMPR DY+R
Sbjct: 1   MSLSPHHHSPASSSSSS-----SSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLR 60

Query: 61  RCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNGWPFQLL 120
           RCRD SID+ ARQDSINWIL VH+HYNFKPVTAILSVNYFDRFLS+N LPRRNGW FQLL
Sbjct: 61  RCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLL 120

Query: 121 AVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFL 180
           +VACLSLAAKMEEP VPLLLDLQIFEPKYVF+PKTVQRMEL V+SILNWRLR VTPFDFL
Sbjct: 121 SVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFL 180

Query: 181 HHFISDLP-PSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLT 240
           HHFISDLP  SSAADGG GDGD S   LFS+SSDLILST RVIDFL FPP TIAAAAVL 
Sbjct: 181 HHFISDLPSSSSAADGGRGDGDDSD-RLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLC 240

Query: 241 AAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPV 300
           AAGER++SPA C+HFLAANR+E V+SC QLMEEY+IDTC A+L KQR  G E+PAP SPV
Sbjct: 241 AAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPV 300

Query: 301 GVLEAAACGSCDTEAAV--EPPTKRLRSSAPDVQEQ 333
           GVL+AAAC SCD   +   EPP+KR+RSSAPDVQ Q
Sbjct: 301 GVLDAAACASCDNPGSTSHEPPSKRIRSSAPDVQHQ 330

[Close]
BLAST of Cp4.1LG14g04540 vs. NCBI nr
Match: gi|590687462|ref|XP_007042670.1| (Cyclin d1,1 isoform 2 [Theobroma cacao])

HSP 1 Score: 362.1 bits (928), Expect = 1.1e-96
Identity = 209/358 (58.38%), Postives = 243/358 (67.88%), Query Frame = 1 

Query: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLI--------------------SDDSA 60
           MSLS   +  ++SS   A   S  L C   A  ++                    SD ++
Sbjct: 1   MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 60

Query: 61  IFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFD 120
           I  L+  E  HMP  DY+ R +DRSIDV ARQDSINWILKVHA+Y+F PVTA LSVNYFD
Sbjct: 61  ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 120

Query: 121 RFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMEL 180
           RFLS++ LP+ NGWPFQLL+VACLSLAAKMEEP VPLLLDLQ+FEP++ F+PKT+QRMEL
Sbjct: 121 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 180

Query: 181 RVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRV 240
           RV++ LNWRLR VTPFD+LHHFI  LP  S           S   + S SSDLILSTTRV
Sbjct: 181 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPN------SFSSVVSASSDLILSTTRV 240

Query: 241 IDFLGFPPCTIAAAAVLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPAD 300
           IDFLGF P TIAAAAVL AAGE  + PA    F      EMV SC+QLMEEY+IDTCP+ 
Sbjct: 241 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 300

Query: 301 LPKQRSRGVEQPAPTSPVGVLEAAACGSCDT-------EAAVEPPTKRLRSSAPDVQE 332
             K+  RG + PAP SPVGVL+AAACGSCDT        +  EPP KRLRSSAPDVQ+
Sbjct: 301 RLKE-LRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQQ 351

[Close]
BLAST of Cp4.1LG14g04540 vs. NCBI nr
Match: gi|590687458|ref|XP_007042669.1| (Cyclin d1,1 isoform 1 [Theobroma cacao])

HSP 1 Score: 362.1 bits (928), Expect = 1.1e-96
Identity = 209/358 (58.38%), Postives = 243/358 (67.88%), Query Frame = 1 

Query: 1   MSLSPDQSPASSSSSGPARHVSADLLCSTAADSLI--------------------SDDSA 60
           MSLS   +  ++SS   A   S  L C   A  ++                    SD ++
Sbjct: 51  MSLSQYSTHLNNSSGSAASSSSTSLSCGDDAGEVVTWEPDTSILHQFPSLHNYPPSDVNS 110

Query: 61  IFSLLQSELDHMPRRDYVRRCRDRSIDVIARQDSINWILKVHAHYNFKPVTAILSVNYFD 120
           I  L+  E  HMP  DY+ R +DRSIDV ARQDSINWILKVHA+Y+F PVTA LSVNYFD
Sbjct: 111 ISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLSVNYFD 170

Query: 121 RFLSANFLPRRNGWPFQLLAVACLSLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMEL 180
           RFLS++ LP+ NGWPFQLL+VACLSLAAKMEEP VPLLLDLQ+FEP++ F+PKT+QRMEL
Sbjct: 171 RFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTIQRMEL 230

Query: 181 RVLSILNWRLRVVTPFDFLHHFISDLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRV 240
           RV++ LNWRLR VTPFD+LHHFI  LP  S           S   + S SSDLILSTTRV
Sbjct: 231 RVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPN------SFSSVVSASSDLILSTTRV 290

Query: 241 IDFLGFPPCTIAAAAVLTAAGERVDSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPAD 300
           IDFLGF P TIAAAAVL AAGE  + PA    F      EMV SC+QLMEEY+IDTCP+ 
Sbjct: 291 IDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLIDTCPSA 350

Query: 301 LPKQRSRGVEQPAPTSPVGVLEAAACGSCDT-------EAAVEPPTKRLRSSAPDVQE 332
             K+  RG + PAP SPVGVL+AAACGSCDT        +  EPP KRLRSSAPDVQ+
Sbjct: 351 RLKE-LRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQEEPPAKRLRSSAPDVQQ 401

[Close]
BLAST of Cp4.1LG14g04540 vs. NCBI nr
Match: gi|595792561|ref|XP_007200029.1| (hypothetical protein PRUPE_ppa024287mg [Prunus persica])

HSP 1 Score: 359.0 bits (920), Expect = 9.0e-96
Identity = 205/340 (60.29%), Postives = 247/340 (72.65%), Query Frame = 1 

Query: 10  ASSSSSGPARHVSADLLCST--AADSLISDDSA--IFSLLQSELDHMPRRDYVRRCRDRS 69
           +SSSSS  + + +++ + S+  +  S  +DD+A  +  L+ SEL+HMP  +Y+ R RDRS
Sbjct: 2   SSSSSSSSSSYDTSNFVVSSHHSPPSDETDDTATILTRLIDSELNHMPSPNYISRLRDRS 61

Query: 70  IDVIARQDSINWILKVHAHYNFKPVTAILSVNYFDRFLSANFLPRRNG-WPFQLLAVACL 129
           IDV ARQDSINWILKVHAHY F P+TA LS+NYFDRFLS++ LP+ NG WPFQLL+VACL
Sbjct: 62  IDVTARQDSINWILKVHAHYRFSPLTAFLSINYFDRFLSSHSLPQHNGYWPFQLLSVACL 121

Query: 130 SLAAKMEEPLVPLLLDLQIFEPKYVFDPKTVQRMELRVLSILNWRLRVVTPFDFLHHFIS 189
           SLAAKMEEP VP +LDLQIFEPK+VF+P+TVQRMELRV++ILNWRLR +TPFDFLHHFI+
Sbjct: 122 SLAAKMEEPNVPFILDLQIFEPKFVFEPRTVQRMELRVMTILNWRLRSITPFDFLHHFIA 181

Query: 190 DLPPSSAADGGEGDGDVSRCLLFSTSSDLILSTTRVIDFLGFPPCTIAAAAVLTAAGERV 249
           +LP SS++             LFS SSDLILSTTRVIDFLGF P TIAAAAVL AA + V
Sbjct: 182 NLPSSSSSS------------LFSASSDLILSTTRVIDFLGFSPSTIAAAAVLCAAEKSV 241

Query: 250 ------DSPAVCTHFLAANRVEMVRSCYQLMEEYIIDTCPADLPKQRSRGVEQPAPTSPV 309
                 DS A  + F      E  RSC+QLMEEY+IDTCP+   K+   G    +P SPV
Sbjct: 242 DFAAAEDSDAAASLFHERVNKEGARSCHQLMEEYLIDTCPSSRHKEPVVGTASSSPASPV 301

Query: 310 GVLEAAACGSCDTEA-------AVEPPTKRLR-SSAPDVQ 331
           GVL+AAACGSCDT +         EPP KRLR SSA DVQ
Sbjct: 302 GVLDAAACGSCDTRSENPGSTVEAEPPAKRLRPSSAADVQ 329

The following BLAST results are available for this feature:
BLAST of Cp4.1LG14g04540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCD11_ARATH6.3e-4943.10Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3[more]
CCD41_ORYSJ9.1e-4843.73Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2[more]
CCD21_ORYSJ7.7e-4744.71Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2[more]
CCD21_ARATH1.3e-4639.61Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3[more]
CCD22_ORYSJ1.1e-4540.29Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1[more]
BLAST of Cp4.1LG14g04540 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBG8_CUCME1.4e-13276.15Cyclin d protein OS=Cucumis melo subsp. melo PE=3 SV=1[more]
A0A0A0KSY9_CUCSA5.4e-13276.79Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000660 PE=3 SV=1[more]
A0A061E0K0_THECC7.4e-9758.38Cyclin d1,1 isoform 1 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1[more]
A0A061E2C5_THECC7.4e-9758.38Cyclin d1,1 isoform 2 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1[more]
M5VWB1_PRUPE6.2e-9660.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024287mg PE=3 SV=1[more]
BLAST of Cp4.1LG14g04540 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70210.13.5e-5043.10 CYCLIN D1;1[more]
AT2G22490.25.1e-4939.61 Cyclin D2;1[more]
AT5G65420.31.3e-4136.97 CYCLIN D4;1[more]
AT5G10440.13.3e-4038.98 cyclin d4;2[more]
AT3G50070.15.5e-3536.26 CYCLIN D3;3[more]
BLAST of Cp4.1LG14g04540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108835|ref|XP_008454410.1|2.0e-13276.15PREDICTED: cyclin-D4-2-like [Cucumis melo][more]
gi|449465087|ref|XP_004150260.1|7.8e-13276.79PREDICTED: cyclin-D4-1-like [Cucumis sativus][more]
gi|590687462|ref|XP_007042670.1|1.1e-9658.38Cyclin d1,1 isoform 2 [Theobroma cacao][more]
gi|590687458|ref|XP_007042669.1|1.1e-9658.38Cyclin d1,1 isoform 1 [Theobroma cacao][more]
gi|595792561|ref|XP_007200029.1|9.0e-9660.29hypothetical protein PRUPE_ppa024287mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR004367Cyclin_C-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG14g04540.1Cp4.1LG14g04540.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 173..274
score: 1.
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 173..310
score: 9.
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 44..170
score: 1.7
IPR006671Cyclin, N-terminalPROSITEPS00292CYCLINScoord: 71..102
scor
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 57..164
score: 4.4E-28coord: 165..241
score: 4.
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 76..164
score: 6.7
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 37..170
score: 6.19
NoneNo IPR availablePANTHERPTHR10177CYCLINEcoord: 37..331
score: 2.2E
NoneNo IPR availablePANTHERPTHR10177:SF224SUBFAMILY NOT NAMEDcoord: 37..331
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG14g04540Cucsa.298420Cucumber (Gy14) v1cgycpeB0780
Cp4.1LG14g04540CmaCh16G003100Cucurbita maxima (Rimu)cmacpeB344
Cp4.1LG14g04540CmaCh04G004400Cucurbita maxima (Rimu)cmacpeB715
Cp4.1LG14g04540CmoCh04G004700Cucurbita moschata (Rifu)cmocpeB668
Cp4.1LG14g04540CmoCh16G003300Cucurbita moschata (Rifu)cmocpeB307
Cp4.1LG14g04540Cla006448Watermelon (97103) v1cpewmB204
Cp4.1LG14g04540Csa4G000660Cucumber (Chinese Long) v2cpecuB219
Cp4.1LG14g04540MELO3C018018Melon (DHL92) v3.5.1cpemeB201
Cp4.1LG14g04540ClCG10G010100Watermelon (Charleston Gray)cpewcgB190
Cp4.1LG14g04540CSPI04G00170Wild cucumber (PI 183967)cpecpiB221
Cp4.1LG14g04540Lsi03G010110Bottle gourd (USVL1VR-Ls)cpelsiB168
Cp4.1LG14g04540MELO3C018018.2Melon (DHL92) v3.6.1cpemedB243
Cp4.1LG14g04540CsaV3_4G000140Cucumber (Chinese Long) v3cpecucB0263
Cp4.1LG14g04540Bhi11G000921Wax gourdcpewgoB0266
Cp4.1LG14g04540CsGy4G000180Cucumber (Gy14) v2cgybcpeB485
Cp4.1LG14g04540Carg08114Silver-seed gourdcarcpeB0523
Cp4.1LG14g04540Carg19695Silver-seed gourdcarcpeB0407
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG14g04540Cp4.1LG01g02780Cucurbita pepo (Zucchini)cpecpeB234
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG14g04540Cucurbita maxima (Rimu)cmacpeB114
Cp4.1LG14g04540Cucurbita moschata (Rifu)cmocpeB092
Cp4.1LG14g04540Melon (DHL92) v3.5.1cpemeB200
Cp4.1LG14g04540Melon (DHL92) v3.5.1cpemeB182
Cp4.1LG14g04540Cucumber (Gy14) v2cgybcpeB492
Cp4.1LG14g04540Melon (DHL92) v3.6.1cpemedB220
Cp4.1LG14g04540Melon (DHL92) v3.6.1cpemedB242
Cp4.1LG14g04540Cucumber (Chinese Long) v3cpecucB0245
Cp4.1LG14g04540Cucumber (Chinese Long) v3cpecucB0269