Cp4.1LG01g02780 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g02780
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCyclin d protein
LocationCp4.1LG01 : 2279905 .. 2282200 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCACTGTCTCACTCGCTCGCTCACTCAGCACTTCATTTTAAAAAATAAAAAAAAATTAAAATAATAAGAGAGAGAAAGAGACACAAACACTCTCTCTCTCTCACTGAGTGCAGATTATTGACTATGTTCCATCTAAACGCATAAAGCTATGGCCTTCCCTCCCAACAATCCCACCGCCACTCTCCATCGCCGTTTCACCTTCCTCCTCCTCCTCTCCAATGCCGTCGCCGTTTCTTTTCCGGTGACCTTTATTCTCTTCAATGTCTCTCTCTCCTCATCAATCTGCCGCTTCTTCCTCCGATGACTCTGTCATTTTCACCCTTCTTCAGTCGGAACTCGACCACATGCCTCGCCGTGACTATGTTCTCCGGTGTCGTGACCGGTCGATCGACGTCACCGCTCGCCATGACTCCATCAACTGGATCTTGAAGGTTTACTACTAATCGTTACTTCATTAGCGTTCTTCGCATTTTTGTTCTTGTTTTTTAAGAGCGATTAGGGTTTCGCAGGTGCACGCTCACTACAATTTCAAACCGGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTTCTCTCCTCCAATTTCCTTCCGGTTAAGGATCTATTTCGATTTCCCCCTTGTTTTTGTCTCGATTGTTCGAGAATCGAATCGGAATTTTGAGGCTGATGATTTTAGGGCTTTGTTTTTTGCAGCGGCGGAATGGATGGCCGTTTCAGCTGCTATCGGTGGCGTGTTTGTCATTAGCAGCGAAAATGGAGGAGCCTCAGGTCCCATTGCTTTTGGACCTCCAAATCTTCGAGCCTCAATACGTCTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGATCATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCACTTCATCTCCGATCAGCCTTCTTCTTCCGCTACAGACGGCGGCGATTGCGATAGTGACGGCGACGACTGCCATCTTCTCTTCTCAATTTCTTCCGATCTCATTCTTAGCACTACACGCGGTACTTACGACAAAAAAAACCTAAATCCATTCTATTATCATATTTAATCGGTTTTCTTCTTTTCTCTTTTTGTCTTCTTCGTTCTTAGTTCGATTTATCCATTTCGTCTTTTAAACAAAATTGGAATGATTTTCAGTGATCGATTTCTTGGGGTTCCGGCCGTCCGCCATTGCTGCCGCCGCCGTTCTCTGCGCTGCTGGTGAGCGATTGGATTCTCCAGCGGTTTGTGGCCATTTCCTTACGGCGGACAGAGTCGTAAGTACTAATTCAATGTGTTTGAAAACGAATTTCATAATTCTGTAGGGACTAGTATGCAAAAACAAAATCCTCCTCTTTTTTCTTATTTAATAAAACATAATGTATATTTTTAATATTGTACGAATCTTGATCTTTGTGTGAATAAACAATTAAAACAGGACTAAATTGAAACAAACCGAAATTTATAGGGACCAAAATGAAATTAAAATCCACATCAGGGACCAAATTCGAAATTTAATTAGTTATTTATTTTATTTTTTAAGGCGAAAAATTAAAATAAAATAATAAAAAAAAGGAGCGTTTGGCGTTTGGGGTTAAAATATTTTTGCTGTCAAAATAATTTTAAAAAATTTATTGAAAGTAGGAAATGGTGAGAAGCTGTCACCAACTAATGGAGGAGTACGTGATTGACACGTGTCCGTTAGGCCTCCGAAAACAACGGAATGAAGAAGCCGAGCAGCCGGCTCCCCCGAGTCCAGTCGGCGTGCTCGACGCGGCTGCATGCGGTAGCTGTGACACGCGCTTGGACAATCTCGGCTCTACTAGCCATGAACCCGCCGCTCCCTCAGCCGAACCTCAGACTAAACGGCTGCGATCCTCTGCGCCGGATGTACAGGAGCAGTAGATAAGACCTTCGTGTCATTTGTTATAGGGAGGGTGAAAGAAAGAGAGCTTTTTATTTTTTATTTATATATATATATTTATTTAATTTTAGTTTTTTAACCTTTTCTTTTTCAAAATCAGTGGTCATTCTCTTTCCCTTTTTCTTTGGTCGCCATTCTCTTTGTCGTTGACCATATAAATTGAACGGTTGAGATTGCATGGATCTCCAAACAACAAAAAGGGAAGATTTTTATTTTTGTTTCTTTATTTATATCCAAGAAAGTTTATGAAAAATACCTTACTTTTGTAATTTGTGTTATTCGGAGGGTAAAATGGGAAAATAATGAGGTTTTAGTCATGATGGGGAAACAATAGAAGTCAATAATTTATGAATTATTCCATG

mRNA sequence

CTCACTGTCTCACTCGCTCGCTCACTCAGCACTTCATTTTAAAAAATAAAAAAAAATTAAAATAATAAGAGAGAGAAAGAGACACAAACACTCTCTCTCTCTCACTGAGTGCAGATTATTGACTATGTTCCATCTAAACGCATAAAGCTATGGCCTTCCCTCCCAACAATCCCACCGCCACTCTCCATCGCCGTTTCACCTTCCTCCTCCTCCTCTCCAATGCCGTCGCCGTTTCTTTTCCGGTGACCTTTATTCTCTTCAATGTCTCTCTCTCCTCATCAATCTGCCGCTTCTTCCTCCGATGACTCTGTCATTTTCACCCTTCTTCAGTCGGAACTCGACCACATGCCTCGCCGTGACTATGTTCTCCGGTGTCGTGACCGGTCGATCGACGTCACCGCTCGCCATGACTCCATCAACTGGATCTTGAAGGTGCACGCTCACTACAATTTCAAACCGGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTTCTCTCCTCCAATTTCCTTCCGCGGCGGAATGGATGGCCGTTTCAGCTGCTATCGGTGGCGTGTTTGTCATTAGCAGCGAAAATGGAGGAGCCTCAGGTCCCATTGCTTTTGGACCTCCAAATCTTCGAGCCTCAATACGTCTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGATCATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCACTTCATCTCCGATCAGCCTTCTTCTTCCGCTACAGACGGCGGCGATTGCGATAGTGACGGCGACGACTGCCATCTTCTCTTCTCAATTTCTTCCGATCTCATTCTTAGCACTACACGCGTGATCGATTTCTTGGGGTTCCGGCCGTCCGCCATTGCTGCCGCCGCCGTTCTCTGCGCTGCTGGTGAGCGATTGGATTCTCCAGCGGTTTGTGGCCATTTCCTTACGGCGGACAGAGTCGAAATGGTGAGAAGCTGTCACCAACTAATGGAGGAGTACGTGATTGACACGTGTCCGTTAGGCCTCCGAAAACAACGGAATGAAGAAGCCGAGCAGCCGGCTCCCCCGAGTCCAGTCGGCGTGCTCGACGCGGCTGCATGCGGTAGCTGTGACACGCGCTTGGACAATCTCGGCTCTACTAGCCATGAACCCGCCGCTCCCTCAGCCGAACCTCAGACTAAACGGCTGCGATCCTCTGCGCCGGATGTACAGGAGCAGTAGATAAGACCTTCGTGTCATTTGTTATAGGGAGGGTGAAAGAAAGAGAGCTTTTTATTTTTTATTTATATATATATATTTATTTAATTTTAGTTTTTTAACCTTTTCTTTTTCAAAATCAGTGGTCATTCTCTTTCCCTTTTTCTTTGGTCGCCATTCTCTTTGTCGTTGACCATATAAATTGAACGGTTGAGATTGCATGGATCTCCAAACAACAAAAAGGGAAGATTTTTATTTTTGTTTCTTTATTTATATCCAAGAAAGTTTATGAAAAATACCTTACTTTTGTAATTTGTGTTATTCGGAGGGTAAAATGGGAAAATAATGAGGTTTTAGTCATGATGGGGAAACAATAGAAGTCAATAATTTATGAATTATTCCATG

Coding sequence (CDS)

ATGTCTCTCTCTCCTCATCAATCTGCCGCTTCTTCCTCCGATGACTCTGTCATTTTCACCCTTCTTCAGTCGGAACTCGACCACATGCCTCGCCGTGACTATGTTCTCCGGTGTCGTGACCGGTCGATCGACGTCACCGCTCGCCATGACTCCATCAACTGGATCTTGAAGGTGCACGCTCACTACAATTTCAAACCGGTCACTGCGATTCTCTCCGTTAATTACTTCGATCGCTTTCTCTCCTCCAATTTCCTTCCGCGGCGGAATGGATGGCCGTTTCAGCTGCTATCGGTGGCGTGTTTGTCATTAGCAGCGAAAATGGAGGAGCCTCAGGTCCCATTGCTTTTGGACCTCCAAATCTTCGAGCCTCAATACGTCTTCGAGCCCAAAACGGTTCAGAGAATGGAGCTTTGGATCATGTCTATTCTCAATTGGAGATTACGCGCCGTCACGCCTTTCGATTTCCTCCACCACTTCATCTCCGATCAGCCTTCTTCTTCCGCTACAGACGGCGGCGATTGCGATAGTGACGGCGACGACTGCCATCTTCTCTTCTCAATTTCTTCCGATCTCATTCTTAGCACTACACGCGTGATCGATTTCTTGGGGTTCCGGCCGTCCGCCATTGCTGCCGCCGCCGTTCTCTGCGCTGCTGGTGAGCGATTGGATTCTCCAGCGGTTTGTGGCCATTTCCTTACGGCGGACAGAGTCGAAATGGTGAGAAGCTGTCACCAACTAATGGAGGAGTACGTGATTGACACGTGTCCGTTAGGCCTCCGAAAACAACGGAATGAAGAAGCCGAGCAGCCGGCTCCCCCGAGTCCAGTCGGCGTGCTCGACGCGGCTGCATGCGGTAGCTGTGACACGCGCTTGGACAATCTCGGCTCTACTAGCCATGAACCCGCCGCTCCCTCAGCCGAACCTCAGACTAAACGGCTGCGATCCTCTGCGCCGGATGTACAGGAGCAGTAG

Protein sequence

MSLSPHQSAASSSDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ
Homology
[Close]
BLAST of Cp4.1LG01g02780 vs. Swiss-Prot
Match: CCD22_ORYSJ (Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 8.0e-49
Identity = 127/307 (41.37%), Postives = 173/307 (56.35%), Query Frame = 1 

Query: 15  DSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVN 74
           D  +  L++ E+DH P+R Y+ +     ++ + R D+I+WI KVH++YNF P++  L+VN
Sbjct: 62  DEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSLYLAVN 121

Query: 75  YFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQR 134
           Y DRFLSS  LP    W  QLLSV+CLSLA KMEE  VPL +DLQ+F+ +YVFE + ++R
Sbjct: 122 YLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQVFDAEYVFEARHIKR 181

Query: 135 MELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDG-DDCHLLFSISSDLIL 194
           MEL +M  L WRL+AVTPF F+ +F+            D  ++G    + L S  SDL +
Sbjct: 182 MELIVMKTLKWRLQAVTPFSFIGYFL------------DKFNEGKPPSYTLASWCSDLTV 241

Query: 195 STTRVIDFLGFRPSAIAAAAVLCAAGER--LDSPAVCGHFLTADRVEMVRSCHQLMEEYV 254
            T +   FL FRPS IAAA VL    E   L   +  G        EMV  C++LM E  
Sbjct: 242 GTLKDSRFLSFRPSEIAAAVVLAVLAENQFLVFNSALGESEIPVNKEMVMRCYELMVEKA 301

Query: 255 IDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACG--SCDTRLDNLGSTSHEPAAPSAE-- 314
           +      ++K RN  A    P SP+ VLDAA     S DT L +  S S+     S +  
Sbjct: 302 L------VKKIRNSNASSSVPHSPITVLDAACFSFRSDDTTLGSSQSNSNNKDYNSQDSA 350

[Close]
BLAST of Cp4.1LG01g02780 vs. Swiss-Prot
Match: CCD41_ORYSJ (Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 8.8e-48
Identity = 127/293 (43.34%), Postives = 165/293 (56.31%), Query Frame = 1 

Query: 15  DSVIFTLLQSELDHMPRRDYVLRCR----DRSIDVTARHDSINWILKVHAHYNFKPVTAI 74
           +  +  L+++E DHMPR DY  R R    D  +D+  R D+I+WI KVH++Y+F P+TA 
Sbjct: 66  EECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFAPLTAC 125

Query: 75  LSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPK 134
           L+VNY DRFLS   LP    W  QLL+VACLSLAAKMEE  VP  LDLQ+ E +YVFE K
Sbjct: 126 LAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQVGEERYVFEAK 185

Query: 135 TVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSD 194
           T+QRMEL ++S L WR++AVTPF ++ +F+ +       +GGD  S          +SS+
Sbjct: 186 TIQRMELLVLSTLKWRMQAVTPFSYVDYFLRE------LNGGDPPSGRSAL-----LSSE 245

Query: 195 LILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEY 254
           LIL   R  + LGFRPS IAAA      GE     A   H +  +R+   +   Q ME  
Sbjct: 246 LILCIARGTECLGFRPSEIAAAVAAAVVGE---EHAAFSH-VNKERMSHCQEVIQAME-- 305

Query: 255 VIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAA 304
           +I   P               P SP GVLDAA C S   R D+    SH  A+
Sbjct: 306 LIHPKP---SSPSRVFVSSSIPRSPTGVLDAAGCLS--YRSDDSAVASHYAAS 336

[Close]
BLAST of Cp4.1LG01g02780 vs. Swiss-Prot
Match: CCD11_ARATH (Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3)

HSP 1 Score: 190.7 bits (483), Expect = 2.6e-47
Identity = 107/250 (42.80%), Postives = 149/250 (59.60%), Query Frame = 1 

Query: 18  IFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFD 77
           I   ++ E   +P  DY+ R + RS+D +AR DS+ WILKV A+YNF+P+TA L+VNY D
Sbjct: 52  IACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMD 111

Query: 78  RFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMEL 137
           RFL +  LP  +GWP QLL+VACLSLAAKMEE  VP L D Q+   +Y+FE KT++RMEL
Sbjct: 112 RFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMEL 171

Query: 138 WIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLILSTTR 197
            ++S+L+WRLR+VTPFDF+  F               D  G       S ++++ILS  +
Sbjct: 172 LVLSVLDWRLRSVTPFDFISFF-----------AYKIDPSGTFLGFFISHATEIILSNIK 231

Query: 198 VIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTAD------RVEMVRSCHQLMEEYV 257
              FL + PS+IAAAA+LC A E     +V     + +        E +  C++LM+   
Sbjct: 232 EASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMA 290

Query: 258 IDTCPLGLRK 262
           I+   L   K
Sbjct: 292 IENNRLNTPK 290

[Close]
BLAST of Cp4.1LG01g02780 vs. Swiss-Prot
Match: CCD21_ARATH (Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3)

HSP 1 Score: 185.7 bits (470), Expect = 8.3e-46
Identity = 115/283 (40.64%), Postives = 169/283 (59.72%), Query Frame = 1 

Query: 8   SAASSSDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPV 67
           S++SS  +  I  +L  E++  P  DYV R     +D++ R+ +++WILKV AHY+F  +
Sbjct: 57  SSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHL 116

Query: 68  TAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVF 127
              LS+NY DRFL+S  LP+   W  QLL+V+CLSLA+KMEE  VP ++DLQ+ +P++VF
Sbjct: 117 CICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVF 176

Query: 128 EPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSI 187
           E KT++RMEL +++ LNWRL+A+TPF F+ +F+ D+ S   ++             L   
Sbjct: 177 EAKTIKRMELLVVTTLNWRLQALTPFSFIDYFV-DKISGHVSEN------------LIYR 236

Query: 188 SSDLILSTTRVIDFLGFRPSAIAAAAVLCAA----GERLDSPAVCGHFLTADRVEMVRSC 247
           SS  IL+TT+ I+FL FRPS IAAAA +  +     E +D        +   + E V+ C
Sbjct: 237 SSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYV-KQERVKRC 296

Query: 248 HQLM-----EEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDA 282
             LM     EE V  T    L +++   A +  P SPVGVL+A
Sbjct: 297 LNLMRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEA 322

[Close]
BLAST of Cp4.1LG01g02780 vs. Swiss-Prot
Match: CCD21_ORYSJ (Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-45
Identity = 108/239 (45.19%), Postives = 139/239 (58.16%), Query Frame = 1 

Query: 18  IFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFD 77
           I  L+  E ++ PR DY  R R RSID  AR +S++WILKV  +  F P+TA L+VNY D
Sbjct: 52  IAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMD 111

Query: 78  RFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMEL 137
           RFLS   LP   GW  QLL+VACLSLAAKMEE  VP LLDLQ+   +YVFEP+T+ RME 
Sbjct: 112 RFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQVECSRYVFEPRTICRMEF 171

Query: 138 WIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLILSTTR 197
            I++ LNWRLR+VTPF F+  F     S++     + D                      
Sbjct: 172 LILTALNWRLRSVTPFTFIDFFACKHISNAMVQNANSD---------------------- 231

Query: 198 VIDFLGFRPSAIAAAAVLCAAGE----RLDSPAVCGHFLTADRVEMVRSCHQLMEEYVI 253
            I FL   PS++AAAAVLCA GE       +P +  ++      E + SC+QLM++ VI
Sbjct: 232 -IQFLDHCPSSMAAAAVLCATGETPSLAFVNPELAVNWCIGLAEEGISSCYQLMQQLVI 267

[Close]
BLAST of Cp4.1LG01g02780 vs. TrEMBL
Match: E5GBG8_CUCME (Cyclin d protein OS=Cucumis melo subsp. melo PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 3.5e-136
Identity = 257/312 (82.37%), Postives = 270/312 (86.54%), Query Frame = 1 

Query: 13  SDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SDDS I TLLQSEL HMPR DY+ RCRD SIDVTAR DSINWILKVH+HYNFKPVTAILS
Sbjct: 40  SDDSPISTLLQSELHHMPRIDYLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILS 99

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLSSN LPRRNGW FQLLSVACLSLAAKMEEP+VPLLLDLQIFEP+YVFEPKTV
Sbjct: 100 VNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTV 159

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHFISDQP-SSSATDGGDCDSDGDDCHLLFSISSDL 192
           QRMELW+MSILNWRLRAVTPFDFLHHFISD P SSSA + G  DS  DD H LFS SSDL
Sbjct: 160 QRMELWVMSILNWRLRAVTPFDFLHHFISDLPTSSSAAESGRGDS--DDSHRLFSSSSDL 219

Query: 193 ILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYV 252
           ILSTTRVIDFL F PS IAAAAVLCAAGERLDSP VC HFL A+R+E V+SCHQLMEEYV
Sbjct: 220 ILSTTRVIDFLEFPPSTIAAAAVLCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYV 279

Query: 253 IDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTK 312
           IDTC   LRKQR    EQPAPPSPVGVLDAAACGSCDTRLD+ GSTSHEP  P+    +K
Sbjct: 280 IDTCTAELRKQRRIGEEQPAPPSPVGVLDAAACGSCDTRLDHPGSTSHEP--PAEPSPSK 339

Query: 313 RLRSSAPDVQEQ 324
           R+RSSAPDVQ Q
Sbjct: 340 RIRSSAPDVQHQ 347

[Close]
BLAST of Cp4.1LG01g02780 vs. TrEMBL
Match: A0A0A0KSY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000660 PE=3 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 5.4e-129
Identity = 254/343 (74.05%), Postives = 270/343 (78.72%), Query Frame = 1 

Query: 1   MSLSPHQSAASS-------------------SDDSVIFTLLQSELDHMPRRDYVLRCRDR 60
           MSLSPH  + +S                   SDDS IFTLLQS+L HMPR DY+ RCRD 
Sbjct: 1   MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH 60

Query: 61  SIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACL 120
           SID+TAR DSINWIL VH+HYNFKPVTAILSVNYFDRFLSSN LPRRNGW FQLLSVACL
Sbjct: 61  SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL 120

Query: 121 SLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFIS 180
           SLAAKMEEP+VPLLLDLQIFEP+YVFEPKTVQRMELW+MSILNWRLRAVTPFDFLHHFIS
Sbjct: 121 SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 180

Query: 181 DQP-SSSATDGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGE 240
           D P SSSA DGG    DGDD   LFS SSDLILST RVIDFL F PS IAAAAVLCAAGE
Sbjct: 181 DLPSSSSAADGG--RGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGE 240

Query: 241 RLDSPAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLD 300
           RL+SPA C HFL A+R+E V+SC QLMEEYVIDTC   LRKQR    E+PAPPSPVGVLD
Sbjct: 241 RLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLD 300

Query: 301 AAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ 324
           AAAC SC    DN GSTSH       EP +KR+RSSAPDVQ Q
Sbjct: 301 AAACASC----DNPGSTSH-------EPPSKRIRSSAPDVQHQ 330

[Close]
BLAST of Cp4.1LG01g02780 vs. TrEMBL
Match: A0A061E2C5_THECC (Cyclin d1,1 isoform 2 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103
Identity = 209/310 (67.42%), Postives = 233/310 (75.16%), Query Frame = 1 

Query: 13  SDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SD + I  L+  E  HMP  DY+ R +DRSIDVTAR DSINWILKVHA+Y+F PVTA LS
Sbjct: 56  SDVNSISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLS 115

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLSS+ LP+ NGWPFQLLSVACLSLAAKMEEPQVPLLLDLQ+FEP++ FEPKT+
Sbjct: 116 VNYFDRFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTI 175

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLI 192
           QRMEL +M+ LNWRLR+VTPFD+LHHFI   PS S        S       + S SSDLI
Sbjct: 176 QRMELRVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPNSFSS-------VVSASSDLI 235

Query: 193 LSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYVI 252
           LSTTRVIDFLGF PS IAAAAVLCAAGE  + PA    F      EMV SCHQLMEEY+I
Sbjct: 236 LSTTRVIDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLI 295

Query: 253 DTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKR 312
           DTCP   R +    A+ PAPPSPVGVLDAAACGSCDTR +N GS+S E      EP  KR
Sbjct: 296 DTCP-SARLKELRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQE------EPPAKR 351

Query: 313 LRSSAPDVQE 323
           LRSSAPDVQ+
Sbjct: 356 LRSSAPDVQQ 351

[Close]
BLAST of Cp4.1LG01g02780 vs. TrEMBL
Match: A0A061E0K0_THECC (Cyclin d1,1 isoform 1 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 2.3e-103
Identity = 209/310 (67.42%), Postives = 233/310 (75.16%), Query Frame = 1 

Query: 13  SDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SD + I  L+  E  HMP  DY+ R +DRSIDVTAR DSINWILKVHA+Y+F PVTA LS
Sbjct: 106 SDVNSISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLS 165

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLSS+ LP+ NGWPFQLLSVACLSLAAKMEEPQVPLLLDLQ+FEP++ FEPKT+
Sbjct: 166 VNYFDRFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTI 225

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLI 192
           QRMEL +M+ LNWRLR+VTPFD+LHHFI   PS S        S       + S SSDLI
Sbjct: 226 QRMELRVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPNSFSS-------VVSASSDLI 285

Query: 193 LSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYVI 252
           LSTTRVIDFLGF PS IAAAAVLCAAGE  + PA    F      EMV SCHQLMEEY+I
Sbjct: 286 LSTTRVIDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLI 345

Query: 253 DTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKR 312
           DTCP   R +    A+ PAPPSPVGVLDAAACGSCDTR +N GS+S E      EP  KR
Sbjct: 346 DTCP-SARLKELRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQE------EPPAKR 401

Query: 313 LRSSAPDVQE 323
           LRSSAPDVQ+
Sbjct: 406 LRSSAPDVQQ 401

[Close]
BLAST of Cp4.1LG01g02780 vs. TrEMBL
Match: A0A067F3Y8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018657mg PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 6.3e-101
Identity = 210/322 (65.22%), Postives = 242/322 (75.16%), Query Frame = 1 

Query: 4   SPHQSAASSSD-DSVIFTLL--QSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 63
           SP       +D D V+  L+  +SE  HM   DY+ R RD S+ VTAR DSINWIL VHA
Sbjct: 46  SPAFDVVDDADADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHA 105

Query: 64  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 123
           +Y F+PVTA+LSVNYFDRFLSS+FLP  NGWP QLLSVACLSLAAKMEE QVPLLLDLQI
Sbjct: 106 NYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQI 165

Query: 124 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDD 183
           F+P++VFEPKTVQRMEL +MS+LNWRL ++TPFD+LH+FIS  P+SS+         G  
Sbjct: 166 FDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSS-------EPGSF 225

Query: 184 CHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMV 243
              L+S SSDLI+ TTRV++FLGF PS IAAAAVLCAAGE LDSPA+C   L     EMV
Sbjct: 226 TRFLWS-SSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGESLDSPAICHQRLNE---EMV 285

Query: 244 RSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHE 303
           RSCHQLMEEY+IDTCP    K ++EE  Q APPSPVGVLDAAACGSCDTR DN GS++  
Sbjct: 286 RSCHQLMEEYLIDTCPSAQVKDQSEE-PQVAPPSPVGVLDAAACGSCDTRSDNPGSSNQ- 345

Query: 304 PAAPSAEPQTKRLRSSAPDVQE 323
                AE   KRLRSSAPDVQ+
Sbjct: 346 ---VEAELCAKRLRSSAPDVQQ 351

[Close]
BLAST of Cp4.1LG01g02780 vs. TAIR10
Match: AT1G70210.1 (AT1G70210.1 CYCLIN D1;1)

HSP 1 Score: 190.7 bits (483), Expect = 1.4e-48
Identity = 107/250 (42.80%), Postives = 149/250 (59.60%), Query Frame = 1 

Query: 18  IFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFD 77
           I   ++ E   +P  DY+ R + RS+D +AR DS+ WILKV A+YNF+P+TA L+VNY D
Sbjct: 52  IACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMD 111

Query: 78  RFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMEL 137
           RFL +  LP  +GWP QLL+VACLSLAAKMEE  VP L D Q+   +Y+FE KT++RMEL
Sbjct: 112 RFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMEL 171

Query: 138 WIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLILSTTR 197
            ++S+L+WRLR+VTPFDF+  F               D  G       S ++++ILS  +
Sbjct: 172 LVLSVLDWRLRSVTPFDFISFF-----------AYKIDPSGTFLGFFISHATEIILSNIK 231

Query: 198 VIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTAD------RVEMVRSCHQLMEEYV 257
              FL + PS+IAAAA+LC A E     +V     + +        E +  C++LM+   
Sbjct: 232 EASFLEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLMKAMA 290

Query: 258 IDTCPLGLRK 262
           I+   L   K
Sbjct: 292 IENNRLNTPK 290

[Close]
BLAST of Cp4.1LG01g02780 vs. TAIR10
Match: AT2G22490.2 (AT2G22490.2 Cyclin D2;1)

HSP 1 Score: 189.5 bits (480), Expect = 3.2e-48
Identity = 115/283 (40.64%), Postives = 169/283 (59.72%), Query Frame = 1 

Query: 8   SAASSSDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPV 67
           S++SS  +  I  +L  E++  P  DYV R     +D++ R+ +++WILKV AHY+F  +
Sbjct: 57  SSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHL 116

Query: 68  TAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVF 127
              LS+NY DRFL+S  LP+   W  QLL+V+CLSLA+KMEE  VP ++DLQ+ +P++VF
Sbjct: 117 CICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVF 176

Query: 128 EPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSI 187
           E KT++RMEL +++ LNWRL+A+TPF F+ +F+ D+ S   ++             L   
Sbjct: 177 EAKTIKRMELLVVTTLNWRLQALTPFSFIDYFV-DKISGHVSEN------------LIYR 236

Query: 188 SSDLILSTTRVIDFLGFRPSAIAAAAVLCAA----GERLDSPAVCGHFLTADRVEMVRSC 247
           SS  IL+TT+ I+FL FRPS IAAAA +  +     E +D        +   + E V+ C
Sbjct: 237 SSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGETECIDEEKALSSLIYVKQQERVKRC 296

Query: 248 HQLM-----EEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDA 282
             LM     EE V  T    L +++   A +  P SPVGVL+A
Sbjct: 297 LNLMRSLTGEENVRGT---SLSQEQARVAVRAVPASPVGVLEA 323

[Close]
BLAST of Cp4.1LG01g02780 vs. TAIR10
Match: AT5G65420.3 (AT5G65420.3 CYCLIN D4;1)

HSP 1 Score: 176.0 bits (445), Expect = 3.7e-44
Identity = 111/310 (35.81%), Postives = 164/310 (52.90%), Query Frame = 1 

Query: 5   PHQSAASSSDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTA-RHDSINWILKVHAH-- 64
           P    + S  + +I  +++ E  H+P  DY+ R R   +D+   R D++NWI K+     
Sbjct: 34  PQMGFSQSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKIRGLCR 93

Query: 65  --------YNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVP 124
                   + F P+   L++NY DRFLS + LP   GW  QLL+VACLSLAAK+EE +VP
Sbjct: 94  TDREACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVP 153

Query: 125 LLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGD 184
           +L+DLQ+ +PQ+VFE K+VQRMEL +++ L WRLRA+TP  ++ +F+             
Sbjct: 154 MLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAITPCSYIRYFLRKM--------SK 213

Query: 185 CDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGE----RLDSPAVCG 244
           CD   +  + L S S  +I STT+ IDFL FRPS +AAA  L  +GE      D+ +   
Sbjct: 214 CDQ--EPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGELQRVHFDNSSFSP 273

Query: 245 HFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDT 300
            F    + E V+   +++E    D C                  +P GVL+ +AC     
Sbjct: 274 LFSLLQK-ERVKKIGEMIESDGSDLC----------------SQTPNGVLEVSACCFSFK 316

[Close]
BLAST of Cp4.1LG01g02780 vs. TAIR10
Match: AT5G10440.1 (AT5G10440.1 cyclin d4;2)

HSP 1 Score: 165.6 bits (418), Expect = 5.0e-41
Identity = 94/234 (40.17%), Postives = 137/234 (58.55%), Query Frame = 1 

Query: 15  DSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILSVN 74
           + ++  +++ E  H PR DY+ R R+  +D   R  ++ WI K      F P+   L++N
Sbjct: 36  EEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQALGWIWKACEELQFGPLCICLAMN 95

Query: 75  YFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQR 134
           Y DRFLS + LP    W  QLL+VACLSLAAK+EE  VP L+ LQ+  P +VFE K+VQR
Sbjct: 96  YLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKSVQR 155

Query: 135 MELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLILS 194
           MEL ++++L WRLRAVTP  ++ +F+      S  +G D +        L + S  +I S
Sbjct: 156 MELLVLNVLRWRLRAVTPCSYVRYFL------SKINGYDQEPHS----RLVTRSLQVIAS 215

Query: 195 TTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLME 249
           TT+ IDFL FR S IAAA  L  +GE  D  +    F + ++ E V+   +++E
Sbjct: 216 TTKGIDFLEFRASEIAAAVALSVSGEHFDKFSFSSSFSSLEK-ERVKKIGEMIE 258

[Close]
BLAST of Cp4.1LG01g02780 vs. TAIR10
Match: AT3G50070.1 (AT3G50070.1 CYCLIN D3;3)

HSP 1 Score: 154.5 bits (389), Expect = 1.1e-37
Identity = 112/320 (35.00%), Postives = 164/320 (51.25%), Query Frame = 1 

Query: 14  DDSVIFTLLQSE----LDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTA 73
           DD  + TL+  +     D +   ++++ CR++++D         WI KV +HY F  +TA
Sbjct: 57  DDDELSTLISKQEPCLYDEILDDEFLVLCREKALD---------WIFKVKSHYGFNSLTA 116

Query: 74  ILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEP 133
           +L+VNYFDRF++S        W  QL ++ACLSLAAK+EE +VP LLD Q+ E +YVFE 
Sbjct: 117 LLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEA 176

Query: 134 KTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSIS- 193
           KT+QRMEL ++S L+WR+  VTP  F  H I      S              H L  +S 
Sbjct: 177 KTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSH-------------HQLEFLSR 236

Query: 194 -SDLILSTTRVIDFLGFRPSAIAAAAVLCAAGE--RLDSPAVCGHFLTADRV--EMVRSC 253
              L+LS      FL F PS +A A ++    +    D        +T  +V  E V  C
Sbjct: 237 CESLLLSIIPDSRFLSFSPSVLATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKC 296

Query: 254 HQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAA 313
           ++L    V+D  P   +K+     +QPA  SP+GV DA+           + +++   ++
Sbjct: 297 YEL----VLDHSP--SKKRMMNWMQQPA--SPIGVFDASFSSDSSNESWVVSASASVSSS 341

Query: 314 PSAEPQTKRLRSSAPDVQEQ 324
           PS+EP  KR R     VQEQ
Sbjct: 357 PSSEPLLKRRR-----VQEQ 341

[Close]
BLAST of Cp4.1LG01g02780 vs. NCBI nr
Match: gi|659108835|ref|XP_008454410.1| (PREDICTED: cyclin-D4-2-like [Cucumis melo])

HSP 1 Score: 492.7 bits (1267), Expect = 5.0e-136
Identity = 257/312 (82.37%), Postives = 270/312 (86.54%), Query Frame = 1 

Query: 13  SDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SDDS I TLLQSEL HMPR DY+ RCRD SIDVTAR DSINWILKVH+HYNFKPVTAILS
Sbjct: 40  SDDSPISTLLQSELHHMPRIDYLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILS 99

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLSSN LPRRNGW FQLLSVACLSLAAKMEEP+VPLLLDLQIFEP+YVFEPKTV
Sbjct: 100 VNYFDRFLSSNILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTV 159

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHFISDQP-SSSATDGGDCDSDGDDCHLLFSISSDL 192
           QRMELW+MSILNWRLRAVTPFDFLHHFISD P SSSA + G  DS  DD H LFS SSDL
Sbjct: 160 QRMELWVMSILNWRLRAVTPFDFLHHFISDLPTSSSAAESGRGDS--DDSHRLFSSSSDL 219

Query: 193 ILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYV 252
           ILSTTRVIDFL F PS IAAAAVLCAAGERLDSP VC HFL A+R+E V+SCHQLMEEYV
Sbjct: 220 ILSTTRVIDFLEFPPSTIAAAAVLCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYV 279

Query: 253 IDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTK 312
           IDTC   LRKQR    EQPAPPSPVGVLDAAACGSCDTRLD+ GSTSHEP  P+    +K
Sbjct: 280 IDTCTAELRKQRRIGEEQPAPPSPVGVLDAAACGSCDTRLDHPGSTSHEP--PAEPSPSK 339

Query: 313 RLRSSAPDVQEQ 324
           R+RSSAPDVQ Q
Sbjct: 340 RIRSSAPDVQHQ 347

[Close]
BLAST of Cp4.1LG01g02780 vs. NCBI nr
Match: gi|449465087|ref|XP_004150260.1| (PREDICTED: cyclin-D4-1-like [Cucumis sativus])

HSP 1 Score: 468.8 bits (1205), Expect = 7.8e-129
Identity = 254/343 (74.05%), Postives = 270/343 (78.72%), Query Frame = 1 

Query: 1   MSLSPHQSAASS-------------------SDDSVIFTLLQSELDHMPRRDYVLRCRDR 60
           MSLSPH  + +S                   SDDS IFTLLQS+L HMPR DY+ RCRD 
Sbjct: 1   MSLSPHHHSPASSSSSSSSHFLCSSAPDFPLSDDSPIFTLLQSQLHHMPRLDYLRRCRDH 60

Query: 61  SIDVTARHDSINWILKVHAHYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACL 120
           SID+TAR DSINWIL VH+HYNFKPVTAILSVNYFDRFLSSN LPRRNGW FQLLSVACL
Sbjct: 61  SIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFLSSNILPRRNGWAFQLLSVACL 120

Query: 121 SLAAKMEEPQVPLLLDLQIFEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFIS 180
           SLAAKMEEP+VPLLLDLQIFEP+YVFEPKTVQRMELW+MSILNWRLRAVTPFDFLHHFIS
Sbjct: 121 SLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFIS 180

Query: 181 DQP-SSSATDGGDCDSDGDDCHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGE 240
           D P SSSA DGG    DGDD   LFS SSDLILST RVIDFL F PS IAAAAVLCAAGE
Sbjct: 181 DLPSSSSAADGG--RGDGDDSDRLFSSSSDLILSTIRVIDFLEFPPSTIAAAAVLCAAGE 240

Query: 241 RLDSPAVCGHFLTADRVEMVRSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLD 300
           RL+SPA C HFL A+R+E V+SC QLMEEYVIDTC   LRKQR    E+PAPPSPVGVLD
Sbjct: 241 RLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAELRKQRRIGEEEPAPPSPVGVLD 300

Query: 301 AAACGSCDTRLDNLGSTSHEPAAPSAEPQTKRLRSSAPDVQEQ 324
           AAAC SC    DN GSTSH       EP +KR+RSSAPDVQ Q
Sbjct: 301 AAACASC----DNPGSTSH-------EPPSKRIRSSAPDVQHQ 330

[Close]
BLAST of Cp4.1LG01g02780 vs. NCBI nr
Match: gi|590687462|ref|XP_007042670.1| (Cyclin d1,1 isoform 2 [Theobroma cacao])

HSP 1 Score: 383.6 bits (984), Expect = 3.3e-103
Identity = 209/310 (67.42%), Postives = 233/310 (75.16%), Query Frame = 1 

Query: 13  SDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SD + I  L+  E  HMP  DY+ R +DRSIDVTAR DSINWILKVHA+Y+F PVTA LS
Sbjct: 56  SDVNSISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLS 115

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLSS+ LP+ NGWPFQLLSVACLSLAAKMEEPQVPLLLDLQ+FEP++ FEPKT+
Sbjct: 116 VNYFDRFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTI 175

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLI 192
           QRMEL +M+ LNWRLR+VTPFD+LHHFI   PS S        S       + S SSDLI
Sbjct: 176 QRMELRVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPNSFSS-------VVSASSDLI 235

Query: 193 LSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYVI 252
           LSTTRVIDFLGF PS IAAAAVLCAAGE  + PA    F      EMV SCHQLMEEY+I
Sbjct: 236 LSTTRVIDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLI 295

Query: 253 DTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKR 312
           DTCP   R +    A+ PAPPSPVGVLDAAACGSCDTR +N GS+S E      EP  KR
Sbjct: 296 DTCP-SARLKELRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQE------EPPAKR 351

Query: 313 LRSSAPDVQE 323
           LRSSAPDVQ+
Sbjct: 356 LRSSAPDVQQ 351

[Close]
BLAST of Cp4.1LG01g02780 vs. NCBI nr
Match: gi|590687458|ref|XP_007042669.1| (Cyclin d1,1 isoform 1 [Theobroma cacao])

HSP 1 Score: 383.6 bits (984), Expect = 3.3e-103
Identity = 209/310 (67.42%), Postives = 233/310 (75.16%), Query Frame = 1 

Query: 13  SDDSVIFTLLQSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHAHYNFKPVTAILS 72
           SD + I  L+  E  HMP  DY+ R +DRSIDVTAR DSINWILKVHA+Y+F PVTA LS
Sbjct: 106 SDVNSISELVDLEPHHMPFPDYLHRFQDRSIDVTARQDSINWILKVHAYYHFSPVTAFLS 165

Query: 73  VNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQIFEPQYVFEPKTV 132
           VNYFDRFLSS+ LP+ NGWPFQLLSVACLSLAAKMEEPQVPLLLDLQ+FEP++ FEPKT+
Sbjct: 166 VNYFDRFLSSHSLPQANGWPFQLLSVACLSLAAKMEEPQVPLLLDLQVFEPRFAFEPKTI 225

Query: 133 QRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDDCHLLFSISSDLI 192
           QRMEL +M+ LNWRLR+VTPFD+LHHFI   PS S        S       + S SSDLI
Sbjct: 226 QRMELRVMATLNWRLRSVTPFDYLHHFICKLPSCSTRLPNSFSS-------VVSASSDLI 285

Query: 193 LSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMVRSCHQLMEEYVI 252
           LSTTRVIDFLGF PS IAAAAVLCAAGE  + PA    F      EMV SCHQLMEEY+I
Sbjct: 286 LSTTRVIDFLGFAPSTIAAAAVLCAAGEGFEFPADDALFHETVNKEMVGSCHQLMEEYLI 345

Query: 253 DTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHEPAAPSAEPQTKR 312
           DTCP   R +    A+ PAPPSPVGVLDAAACGSCDTR +N GS+S E      EP  KR
Sbjct: 346 DTCP-SARLKELRGAQPPAPPSPVGVLDAAACGSCDTRSENPGSSSQE------EPPAKR 401

Query: 313 LRSSAPDVQE 323
           LRSSAPDVQ+
Sbjct: 406 LRSSAPDVQQ 401

[Close]
BLAST of Cp4.1LG01g02780 vs. NCBI nr
Match: gi|641838990|gb|KDO57926.1| (hypothetical protein CISIN_1g018657mg [Citrus sinensis])

HSP 1 Score: 375.6 bits (963), Expect = 9.0e-101
Identity = 210/322 (65.22%), Postives = 242/322 (75.16%), Query Frame = 1 

Query: 4   SPHQSAASSSD-DSVIFTLL--QSELDHMPRRDYVLRCRDRSIDVTARHDSINWILKVHA 63
           SP       +D D V+  L+  +SE  HM   DY+ R RD S+ VTAR DSINWIL VHA
Sbjct: 46  SPAFDVVDDADADDVVSRLIDRESETHHMLHPDYLHRFRDCSVFVTARQDSINWILNVHA 105

Query: 64  HYNFKPVTAILSVNYFDRFLSSNFLPRRNGWPFQLLSVACLSLAAKMEEPQVPLLLDLQI 123
           +Y F+PVTA+LSVNYFDRFLSS+FLP  NGWP QLLSVACLSLAAKMEE QVPLLLDLQI
Sbjct: 106 NYKFRPVTALLSVNYFDRFLSSHFLPLANGWPLQLLSVACLSLAAKMEETQVPLLLDLQI 165

Query: 124 FEPQYVFEPKTVQRMELWIMSILNWRLRAVTPFDFLHHFISDQPSSSATDGGDCDSDGDD 183
           F+P++VFEPKTVQRMEL +MS+LNWRL ++TPFD+LH+FIS  P+SS+         G  
Sbjct: 166 FDPRFVFEPKTVQRMELRVMSVLNWRLNSITPFDYLHYFISKLPASSS-------EPGSF 225

Query: 184 CHLLFSISSDLILSTTRVIDFLGFRPSAIAAAAVLCAAGERLDSPAVCGHFLTADRVEMV 243
              L+S SSDLI+ TTRV++FLGF PS IAAAAVLCAAGE LDSPA+C   L     EMV
Sbjct: 226 TRFLWS-SSDLIIRTTRVVNFLGFAPSTIAAAAVLCAAGESLDSPAICHQRLNE---EMV 285

Query: 244 RSCHQLMEEYVIDTCPLGLRKQRNEEAEQPAPPSPVGVLDAAACGSCDTRLDNLGSTSHE 303
           RSCHQLMEEY+IDTCP    K ++EE  Q APPSPVGVLDAAACGSCDTR DN GS++  
Sbjct: 286 RSCHQLMEEYLIDTCPSAQVKDQSEE-PQVAPPSPVGVLDAAACGSCDTRSDNPGSSNQ- 345

Query: 304 PAAPSAEPQTKRLRSSAPDVQE 323
                AE   KRLRSSAPDVQ+
Sbjct: 346 ---VEAELCAKRLRSSAPDVQQ 351

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g02780 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCD22_ORYSJ8.0e-4941.37Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1[more]
CCD41_ORYSJ8.8e-4843.34Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2[more]
CCD11_ARATH2.6e-4742.80Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3[more]
CCD21_ARATH8.3e-4640.64Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3[more]
CCD21_ORYSJ1.8e-4545.19Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2[more]
BLAST of Cp4.1LG01g02780 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBG8_CUCME3.5e-13682.37Cyclin d protein OS=Cucumis melo subsp. melo PE=3 SV=1[more]
A0A0A0KSY9_CUCSA5.4e-12974.05Uncharacterized protein OS=Cucumis sativus GN=Csa_4G000660 PE=3 SV=1[more]
A0A061E2C5_THECC2.3e-10367.42Cyclin d1,1 isoform 2 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1[more]
A0A061E0K0_THECC2.3e-10367.42Cyclin d1,1 isoform 1 OS=Theobroma cacao GN=TCM_007246 PE=3 SV=1[more]
A0A067F3Y8_CITSI6.3e-10165.22Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018657mg PE=3 SV=1[more]
BLAST of Cp4.1LG01g02780 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70210.11.4e-4842.80 CYCLIN D1;1[more]
AT2G22490.23.2e-4840.64 Cyclin D2;1[more]
AT5G65420.33.7e-4435.81 CYCLIN D4;1[more]
AT5G10440.15.0e-4140.17 cyclin d4;2[more]
AT3G50070.11.1e-3735.00 CYCLIN D3;3[more]
BLAST of Cp4.1LG01g02780 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108835|ref|XP_008454410.1|5.0e-13682.37PREDICTED: cyclin-D4-2-like [Cucumis melo][more]
gi|449465087|ref|XP_004150260.1|7.8e-12974.05PREDICTED: cyclin-D4-1-like [Cucumis sativus][more]
gi|590687462|ref|XP_007042670.1|3.3e-10367.42Cyclin d1,1 isoform 2 [Theobroma cacao][more]
gi|590687458|ref|XP_007042669.1|3.3e-10367.42Cyclin d1,1 isoform 1 [Theobroma cacao][more]
gi|641838990|gb|KDO57926.1|9.0e-10165.22hypothetical protein CISIN_1g018657mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR004367Cyclin_C-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0006810 transport
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02780.1Cp4.1LG01g02780.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 150..252
score: 3.
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 150..275
score: 1.
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 21..147
score: 5.4
IPR006671Cyclin, N-terminalPROSITEPS00292CYCLINScoord: 48..79
scor
IPR013763Cyclin-likeGENE3DG3DSA:1.10.472.10coord: 39..141
score: 1.5E-28coord: 142..251
score: 2.
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 53..141
score: 6.6
IPR013763Cyclin-likeunknownSSF47954Cyclin-likecoord: 12..147
score: 2.4
NoneNo IPR availablePANTHERPTHR10177CYCLINEcoord: 1..322
score: 7.2E
NoneNo IPR availablePANTHERPTHR10177:SF224SUBFAMILY NOT NAMEDcoord: 1..322
score: 7.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g02780Cucsa.298420Cucumber (Gy14) v1cgycpeB0781
Cp4.1LG01g02780CmaCh16G003100Cucurbita maxima (Rimu)cmacpeB351
Cp4.1LG01g02780CmaCh04G004400Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g02780CmoCh04G004700Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g02780CmoCh16G003300Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g02780Cla006448Watermelon (97103) v1cpewmB382
Cp4.1LG01g02780Csa4G000660Cucumber (Chinese Long) v2cpecuB402
Cp4.1LG01g02780MELO3C018018Melon (DHL92) v3.5.1cpemeB422
Cp4.1LG01g02780ClCG10G010100Watermelon (Charleston Gray)cpewcgB345
Cp4.1LG01g02780CSPI04G00170Wild cucumber (PI 183967)cpecpiB399
Cp4.1LG01g02780Lsi03G010110Bottle gourd (USVL1VR-Ls)cpelsiB340
Cp4.1LG01g02780MELO3C018018.2Melon (DHL92) v3.6.1cpemedB494
Cp4.1LG01g02780CsaV3_4G000140Cucumber (Chinese Long) v3cpecucB0499
Cp4.1LG01g02780Bhi11G000921Wax gourdcpewgoB0477
Cp4.1LG01g02780CsGy4G000180Cucumber (Gy14) v2cgybcpeB504
Cp4.1LG01g02780Carg08114Silver-seed gourdcarcpeB0527
Cp4.1LG01g02780Carg19695Silver-seed gourdcarcpeB0408
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g02780Cp4.1LG14g04540Cucurbita pepo (Zucchini)cpecpeB234
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g02780Cucurbita pepo (Zucchini)cpecpeB260
Cp4.1LG01g02780Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG01g02780Cucumber (Gy14) v1cgycpeB0218
Cp4.1LG01g02780Cucumber (Gy14) v1cgycpeB0599
Cp4.1LG01g02780Cucurbita maxima (Rimu)cmacpeB136
Cp4.1LG01g02780Cucurbita moschata (Rifu)cmocpeB114
Cp4.1LG01g02780Cucurbita moschata (Rifu)cmocpeB815
Cp4.1LG01g02780Wild cucumber (PI 183967)cpecpiB470
Cp4.1LG01g02780Cucumber (Chinese Long) v2cpecuB468
Cp4.1LG01g02780Cucumber (Chinese Long) v2cpecuB470
Cp4.1LG01g02780Bottle gourd (USVL1VR-Ls)cpelsiB325
Cp4.1LG01g02780Watermelon (Charleston Gray)cpewcgB378
Cp4.1LG01g02780Melon (DHL92) v3.5.1cpemeB394
Cp4.1LG01g02780Melon (DHL92) v3.5.1cpemeB435
Cp4.1LG01g02780Cucumber (Gy14) v2cgybcpeB515
Cp4.1LG01g02780Cucumber (Gy14) v2cgybcpeB805
Cp4.1LG01g02780Cucumber (Gy14) v2cgybcpeB941
Cp4.1LG01g02780Melon (DHL92) v3.6.1cpemedB457
Cp4.1LG01g02780Melon (DHL92) v3.6.1cpemedB492
Cp4.1LG01g02780Melon (DHL92) v3.6.1cpemedB507
Cp4.1LG01g02780Silver-seed gourdcarcpeB1032
Cp4.1LG01g02780Cucumber (Chinese Long) v3cpecucB0511
Cp4.1LG01g02780Cucumber (Chinese Long) v3cpecucB0576
Cp4.1LG01g02780Cucumber (Chinese Long) v3cpecucB0582
Cp4.1LG01g02780Wax gourdcpewgoB0580