Csa3G239860 (gene) Cucumber (Chinese Long) v2

NameCsa3G239860
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
LocationChr3 : 15427651 .. 15429971 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCTATCGTCACCCCCAAAAGGGCCAAAACCCCTAATTCTCCACCGTCTCTGTCTTCCGGCGAAGCTTATCAATGGCATTATCGAAGCCGGCCTTCTTCACCCACCTCAAAACCCTAACCGGTTCCCACCATTTACTCCAGCGCCAAGCTCTGGCACCATTTCCTATCGTCACTCTCCGATTTCTCTCTTTTGCATCGGCTGAGGAAGCTGATGCCGAACGACGCCGTCGTAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCTTCCTCTGCCGCTCGTCCACTAACGCAGCCTCCTAGATCTCAAACCCCACAAAACCCTAATGCCCCGAAAATTCCTGAGCACATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAATCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGTCATTCAATTTATTCCAATTGTCGTCCCACCATCTTCACCGTCAATGCGGTTCTCAATGCACAGCTTCGTCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGTCCCTAATATAATCACTCACAATTTGATTTTTCAGACTTATTTGGATTGCCGTAAGCCTGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCGACGACTTATAGGATCTTGATTAAGGGGTTGGTAGACAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGACGAAATGATTGAGAAAGGTTTTGCTCCTGACCCTCTTATTTATCATTATCTGATGGGGGGATGTGTGAGAAGTTTGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAAAAGTTGGGAGCGACTGTGGAAGATGGAGTTGTTTATGGGAACTTGATGAAAGGGTATTTTATGAAAGAAATGGAAGAGGAAGCAATGAAGTGTTATGAGGAGACTGTGGGTGATAATTCAGTGGTGAAGATGAGTGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAATTTGGTGAGGCTTTGACATTGTTTGATAGGATGACAAAAGAGCATCGTCCGCCCAGGCATCTGGCAGTGAACTTGGGAAGCTTTAATGTTATGGTTGATGGGTACTGCATCGAAGGGAGGTTCAAAGAGGCCATTGAAGTATTTGAGAAGATGGGTGATTATAGGTGTTGCCCAGATACGTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAGATGCTTTACGGAACAATGGATGATAAGGGAGTAAACCCGGACGAGTTTACTTATGGTTTGTTGATGGATTCTTGCTTTAAAAAAAACAGGGCAGATGATGCAGCTGCATATTTTAGAAAAATGGTAGATTCTGGACTCAGACCCAATATAGCAGTTTATAATATATTAGTGGACGAGTTGGTTAAATTAGGGAAGATCGACGACGCAAAGTCTTTCTTTGATTTGATGGTGAAGAAGCTCAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAAGCGTTGAGTGAATCAGGAAAAATGGACGAAATACTAAATGTGGTCGATACCCTTCTTGATGATGATGGGATTGAATTTTCGGAAGAGCTGCAGGAGTTCGTGAGAGGTGAGTTGAGGAAGGAAAACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAAGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTTTCTTCTTTACTGTCATCCAAGTTGTTTGCGAACAAGGAAGGTGAGAAAGAATCTGTAGTGAATGAAATGCAATCTGTTGAACAAGAAGACGACAGTGGTAAAACTGAACTTGCGGAATCAAGTCCTTGAAGAAATTGCGTAGTAGAGGGGAAAGTACTGAAGAGCGAGAATTAAACTGTTTAGACATGGAAGAACAGGAGAATTAAACTGTTTAGACATGGAAGAACAGGTGAAATTCACATCAGATTTTGTGTTAGTTGTTGCTTCGATTTGCATGGGAATGTGATCTGTTTTCCATTTCTGTTAACTTTAAATTATTCTCGTTGTTACATTACATGGAAATGTGATCCGCTCTTGGTTCTCTTAACCAATTAGGCAAGAGAAATCTGTACGACAAAAAGAAAATTGATAGACTTCTTTACCTTGCATTTTTGCTTATAATGTTAATGTAATCAGTAATTGTTTCCACTTCTATTTTTTTTTAGTAGATTCAAACGACGGAC

mRNA sequence

ATGGCATTATCGAAGCCGGCCTTCTTCACCCACCTCAAAACCCTAACCGGTTCCCACCATTTACTCCAGCGCCAAGCTCTGGCACCATTTCCTATCGTCACTCTCCGATTTCTCTCTTTTGCATCGGCTGAGGAAGCTGATGCCGAACGACGCCGTCGTAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCTTCCTCTGCCGCTCGTCCACTAACGCAGCCTCCTAGATCTCAAACCCCACAAAACCCTAATGCCCCGAAAATTCCTGAGCACATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAATCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGTCATTCAATTTATTCCAATTGTCGTCCCACCATCTTCACCGTCAATGCGGTTCTCAATGCACAGCTTCGTCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGTCCCTAATATAATCACTCACAATTTGATTTTTCAGACTTATTTGGATTGCCGTAAGCCTGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCGACGACTTATAGGATCTTGATTAAGGGGTTGGTAGACAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGACGAAATGATTGAGAAAGGTTTTGCTCCTGACCCTCTTATTTATCATTATCTGATGGGGGGATGTGTGAGAAGTTTGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAAAAGTTGGGAGCGACTGTGGAAGATGGAGTTGTTTATGGGAACTTGATGAAAGGGTATTTTATGAAAGAAATGGAAGAGGAAGCAATGAAGTGTTATGAGGAGACTGTGGGTGATAATTCAGTGGTGAAGATGAGTGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAATTTGGTGAGGCTTTGACATTGTTTGATAGGATGACAAAAGAGCATCGTCCGCCCAGGCATCTGGCAGTGAACTTGGGAAGCTTTAATGTTATGGTTGATGGGTACTGCATCGAAGGGAGGTTCAAAGAGGCCATTGAAGTATTTGAGAAGATGGGTGATTATAGGTGTTGCCCAGATACGTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAGATGCTTTACGGAACAATGGATGATAAGGGAGTAAACCCGGACGAGTTTACTTATGGTTTGTTGATGGATTCTTGCTTTAAAAAAAACAGGGCAGATGATGCAGCTGCATATTTTAGAAAAATGGTAGATTCTGGACTCAGACCCAATATAGCAGTTTATAATATATTAGTGGACGAGTTGGTTAAATTAGGGAAGATCGACGACGCAAAGTCTTTCTTTGATTTGATGGTGAAGAAGCTCAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAAGCGTTGAGTGAATCAGGAAAAATGGACGAAATACTAAATGTGGTCGATACCCTTCTTGATGATGATGGGATTGAATTTTCGGAAGAGCTGCAGGAGTTCGTGAGAGGTGAGTTGAGGAAGGAAAACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAAGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTTTCTTCTTTACTGTCATCCAAGTTGTTTGCGAACAAGGAAGGTGAGAAAGAATCTGTAGTGAATGAAATGCAATCTGTTGAACAAGAAGACGACAGTGGTAAAACTGAACTTGCGGAATCAAGTCCTTGA

Coding sequence (CDS)

ATGGCATTATCGAAGCCGGCCTTCTTCACCCACCTCAAAACCCTAACCGGTTCCCACCATTTACTCCAGCGCCAAGCTCTGGCACCATTTCCTATCGTCACTCTCCGATTTCTCTCTTTTGCATCGGCTGAGGAAGCTGATGCCGAACGACGCCGTCGTAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCTTCCTCTGCCGCTCGTCCACTAACGCAGCCTCCTAGATCTCAAACCCCACAAAACCCTAATGCCCCGAAAATTCCTGAGCACATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAATCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGTCATTCAATTTATTCCAATTGTCGTCCCACCATCTTCACCGTCAATGCGGTTCTCAATGCACAGCTTCGTCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGTCCCTAATATAATCACTCACAATTTGATTTTTCAGACTTATTTGGATTGCCGTAAGCCTGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCGACGACTTATAGGATCTTGATTAAGGGGTTGGTAGACAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGACGAAATGATTGAGAAAGGTTTTGCTCCTGACCCTCTTATTTATCATTATCTGATGGGGGGATGTGTGAGAAGTTTGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAAAAGTTGGGAGCGACTGTGGAAGATGGAGTTGTTTATGGGAACTTGATGAAAGGGTATTTTATGAAAGAAATGGAAGAGGAAGCAATGAAGTGTTATGAGGAGACTGTGGGTGATAATTCAGTGGTGAAGATGAGTGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAATTTGGTGAGGCTTTGACATTGTTTGATAGGATGACAAAAGAGCATCGTCCGCCCAGGCATCTGGCAGTGAACTTGGGAAGCTTTAATGTTATGGTTGATGGGTACTGCATCGAAGGGAGGTTCAAAGAGGCCATTGAAGTATTTGAGAAGATGGGTGATTATAGGTGTTGCCCAGATACGTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAGATGCTTTACGGAACAATGGATGATAAGGGAGTAAACCCGGACGAGTTTACTTATGGTTTGTTGATGGATTCTTGCTTTAAAAAAAACAGGGCAGATGATGCAGCTGCATATTTTAGAAAAATGGTAGATTCTGGACTCAGACCCAATATAGCAGTTTATAATATATTAGTGGACGAGTTGGTTAAATTAGGGAAGATCGACGACGCAAAGTCTTTCTTTGATTTGATGGTGAAGAAGCTCAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAAGCGTTGAGTGAATCAGGAAAAATGGACGAAATACTAAATGTGGTCGATACCCTTCTTGATGATGATGGGATTGAATTTTCGGAAGAGCTGCAGGAGTTCGTGAGAGGTGAGTTGAGGAAGGAAAACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAAGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTTTCTTCTTTACTGTCATCCAAGTTGTTTGCGAACAAGGAAGGTGAGAAAGAATCTGTAGTGAATGAAATGCAATCTGTTGAACAAGAAGACGACAGTGGTAAAACTGAACTTGCGGAATCAAGTCCTTGA

Protein sequence

MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIEPPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKESVVNEMQSVEQEDDSGKTELAESSP*
BLAST of Csa3G239860 vs. Swiss-Prot
Match: PP273_ARATH (Pentatricopeptide repeat-containing protein At3g49240 OS=Arabidopsis thaliana GN=EMB1796 PE=2 SV=1)

HSP 1 Score: 780.8 bits (2015), Expect = 1.1e-224
Identity = 390/616 (63.31%), Postives = 485/616 (78.73%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           M++SK AF  HL+TL+ S+    R  + P P + +R++SFA+ EEA AERRRRKRRLR+E
Sbjct: 1   MSISKAAFLNHLQTLSRSY----RHRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRME 60

Query: 61  PPLSSSSAARPLTQPPRSQTP---QNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLE 120
           PP++S + +    Q  +SQ P   QNPN PK+PE +SAL G RL+LHN IL LIRENDLE
Sbjct: 61  PPVNSFNRS----QQQQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLE 120

Query: 121 EAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIF 180
           EAAL+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+ PNIIT+NLIF
Sbjct: 121 EAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIF 180

Query: 181 QTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGF 240
           Q YLD RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+K++M  KGF
Sbjct: 181 QAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGF 240

Query: 241 APDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEA 300
             DP++Y YLM GCV++ D DGV KL++ELKEKLG  V+DGVVYG LMKGYFMKEME+EA
Sbjct: 241 VVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEA 300

Query: 301 MKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGS 360
           M+CYEE VG+NS V+MSA+AYN VL+AL  NGKF EAL LFD + KEH PPRHLAVNLG+
Sbjct: 301 MECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGT 360

Query: 361 FNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMD 420
           FNVMV+GYC  G+F+EA+EVF +MGD++C PDTLSFNNL+ QLC+N +LAEAE LYG M+
Sbjct: 361 FNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEME 420

Query: 421 DKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKID 480
           +K V PDE+TYGLLMD+CFK+ + D+ AAY++ MV+S LRPN+AVYN L D+L+K GK+D
Sbjct: 421 EKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 480

Query: 481 DAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVR 540
           DAKSFFD+MV KLKMD  +Y+FIM+ALSE+G++DE+L +VD +LDDD +  SEELQEFV+
Sbjct: 481 DAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVK 540

Query: 541 GELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSK-LFANKEG 600
            ELRK  RE DL KL+EEKERLKAEAKAKE   AE +K++    +++L+  K +   KE 
Sbjct: 541 EELRKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKET 600

Query: 601 EKESVVNEMQSVEQED 613
            K    NE   VE+ D
Sbjct: 601 AKLLWENEAGGVEEAD 608

BLAST of Csa3G239860 vs. Swiss-Prot
Match: PPR29_ARATH (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana GN=GRP23 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.0e-84
Identity = 190/536 (35.45%), Postives = 295/536 (55.04%), Query Frame = 1

Query: 29  PFPIVTLRFLSFASAEEADAERRRRKRRLRIEPPLSSSSAARPLTQPPRSQTPQNPNAPK 88
           P+P +  R ++F+SAEEA AERRRRKRRLRIEPPL +     P   PP+    ++PNAP+
Sbjct: 79  PYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-PSAPPPK----RDPNAPR 138

Query: 89  IPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQ 148
           +P+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ A  R 
Sbjct: 139 LPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRA 198

Query: 149 SKYADLLSLHR-FITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPT 208
            +Y++ +SL + F  Q+ +VPN++++N I   + D    D A+E Y+ ++ +APF PS  
Sbjct: 199 KRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSV 258

Query: 209 TYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEEL 268
           TYR L KGLV   ++  A  L  EM+ KG A D  +Y+ L+ G +   D D   + F+EL
Sbjct: 259 TYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDEL 318

Query: 269 KEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCR 328
           K K   TV DG+V    M+ +F K  ++EAM+ Y   +  +   +M     N +L+   +
Sbjct: 319 KSK--CTVYDGIVNATFMEYWFEKGNDKEAMESYRSLL--DKKFRMHPPTGNVLLEVFLK 378

Query: 329 NGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCC 388
            GK  EA  LF+ M   H PP  L+VN  +  +MV+     G F EAI  F+K+G     
Sbjct: 379 FGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTS 438

Query: 389 P----DTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADD 448
                D L + N++ + C  GML EAE  +     + +  D  ++  ++D+  K  R DD
Sbjct: 439 KPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDD 498

Query: 449 AAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQFIMK 508
           A     +MVD  LR        +  EL+K GK+ ++      M  ++ K D S Y  +++
Sbjct: 499 AVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVR 558

Query: 509 ALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKER 559
            L +   +D+  ++V  ++  + +  +  L+EF+     K  R E++ K++    R
Sbjct: 559 GLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604

BLAST of Csa3G239860 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 2.4e-41
Identity = 108/412 (26.21%), Postives = 196/412 (47.57%), Query Frame = 1

Query: 104 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQ 163
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 164 AGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLE 223
           +G VP++IT+N++   Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALS----VLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 224 RAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGN 283
           +AME+ D M+++   PD + Y  L+    R        KL +E++++ G T  D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GCT-PDVVTYNV 285

Query: 284 LMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTK 343
           L+ G   +   +EA+K   +    +S  + + I +N +L ++C  G++ +A  L   M +
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 344 EHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNN 403
           +   P     ++ +FN++++  C +G    AI++ EKM  + C P++LS+N L+   C  
Sbjct: 346 KGFSP-----SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 405

Query: 404 GMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVY 463
             +  A      M  +G  PD  TY  ++ +  K  + +DA     ++   G  P +  Y
Sbjct: 406 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 465

Query: 464 NILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQFIMKALSESGKMDEIL 515
           N ++D L K GK   A    D M  K LK D  +Y  ++  LS  GK+DE +
Sbjct: 466 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504


HSP 2 Score: 122.5 bits (306), Expect = 1.7e-26
Identity = 88/397 (22.17%), Postives = 183/397 (46.10%), Query Frame = 1

Query: 104 HNRIL-TLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFIT 163
           +N IL +L     L++A       +  +C P + T   ++ A  R S     + L   + 
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266

Query: 164 QAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFN---PSPTTYRILIKGLVDN 223
             G  P+++T+N++        + D A++     +ND P +   P+  T+ I+++ +   
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIK----FLNDMPSSGCQPNVITHNIILRSMCST 326

Query: 224 NKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGV 283
            +   A +L  +M+ KGF+P  + ++ L+    R         + E++ +       + +
Sbjct: 327 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH--GCQPNSL 386

Query: 284 VYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFD 343
            Y  L+ G+  ++  + A++  E  V       +  + YN++L ALC++GK  +A+ + +
Sbjct: 387 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI--VTYNTMLTALCKDGKVEDAVEILN 446

Query: 344 RMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQ 403
           +++ +   P      L ++N ++DG    G+  +AI++ ++M      PDT+++++L+  
Sbjct: 447 QLSSKGCSPV-----LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 506

Query: 404 LCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPN 463
           L   G + EA   +   +  G+ P+  T+  +M    K  + D A  +   M++ G +PN
Sbjct: 507 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 566

Query: 464 IAVYNILVDELVKLGKIDDAKSFFDLMVKKLKMDASS 497
              Y IL++ L   G   +A    + +  K  M  SS
Sbjct: 567 ETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590


HSP 3 Score: 116.3 bits (290), Expect = 1.2e-24
Identity = 97/402 (24.13%), Postives = 176/402 (43.78%), Query Frame = 1

Query: 165 GVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLER 224
           G VP+II    + + +    K   A +   +++  +   P   TY ++I G     ++  
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAK-ILEILEGSGAVPDVITYNVMISGYCKAGEINN 191

Query: 225 AMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKL--GATVEDGVVYG 284
           A+ + D M     +PD + Y+ ++    RSL   G  K   E+ +++       D + Y 
Sbjct: 192 ALSVLDRM---SVSPDVVTYNTIL----RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 251

Query: 285 NLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMT 344
            L++          AMK  +E + D        + YN +++ +C+ G+  EA+   + M 
Sbjct: 252 ILIEATCRDSGVGHAMKLLDE-MRDRGCTP-DVVTYNVLVNGICKEGRLDEAIKFLNDMP 311

Query: 345 KEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCN 404
                P     N+ + N+++   C  GR+ +A ++   M      P  ++FN LI  LC 
Sbjct: 312 SSGCQP-----NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 371

Query: 405 NGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAV 464
            G+L  A  +   M   G  P+  +Y  L+    K+ + D A  Y  +MV  G  P+I  
Sbjct: 372 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 431

Query: 465 YNILVDELVKLGKIDDAKSFFD-LMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTL- 524
           YN ++  L K GK++DA    + L  K       +Y  ++  L+++GK  + + ++D + 
Sbjct: 432 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 491

Query: 525 ---LDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKERL 560
              L  D I +S      + G L +E + ++  K   E ER+
Sbjct: 492 AKDLKPDTITYSS-----LVGGLSREGKVDEAIKFFHEFERM 513

BLAST of Csa3G239860 vs. Swiss-Prot
Match: PPR36_ARATH (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.2e-39
Identity = 109/419 (26.01%), Postives = 198/419 (47.26%), Query Frame = 1

Query: 94  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYAD 153
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 154 LLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILI 213
           +L+L + +   G+  N+ T +++   +  CRK   A     ++I    + P+  T+  LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 214 KGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGA 273
            GL    ++  A+EL D M+E G  PD +  + L+ G   S        L +++ E    
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--G 226

Query: 274 TVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGE 333
              + V YG ++           AM+   +    N  +K+ A+ Y+ ++D LC++G    
Sbjct: 227 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLDN 286

Query: 334 ALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSF 393
           A  LF+ M       + +  N+ ++N+++ G+C  GR+ +  ++   M   +  P+ ++F
Sbjct: 287 AFNLFNEMEM-----KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 346

Query: 394 NNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVD 453
           + LI+     G L EAE L+  M  +G+ PD  TY  L+D   K+N  D A      MV 
Sbjct: 347 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 406

Query: 454 SGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQFIMKALSESGKMD 512
            G  PNI  +NIL++   K  +IDD    F  M ++ +  D  +Y  +++   E GK++
Sbjct: 407 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455


HSP 2 Score: 154.8 bits (390), Expect = 3.0e-36
Identity = 113/462 (24.46%), Postives = 203/462 (43.94%), Query Frame = 1

Query: 99  NRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLH 158
           N +     I  L  E  + EA       +    +P + T+N ++N      K A+ + L 
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216

Query: 159 RFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVD 218
             + + G  PN +T+  +        +   AME  +++  +         Y I+I GL  
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCK 276

Query: 219 NNKLERAMELKDEMIEKGFAPDPLIYHYLMGG-CVRSLDPDGVFKLFEELKEKLGATVED 278
           +  L+ A  L +EM  KG   + + Y+ L+GG C      DG   L + +K K+   V  
Sbjct: 277 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV-- 336

Query: 279 GVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTL 338
            V +  L+  +  +    EA + ++E +  +  +    I Y S++D  C+     +A  +
Sbjct: 337 -VTFSVLIDSFVKEGKLREAEELHKEMI--HRGIAPDTITYTSLIDGFCKENHLDKANQM 396

Query: 339 FDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLI 398
            D M  +   P     N+ +FN++++GYC   R  + +E+F KM       DT+++N LI
Sbjct: 397 VDLMVSKGCDP-----NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 456

Query: 399 EQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLR 458
           +  C  G L  A+ L+  M  + V P+  TY +L+D       ++ A   F K+  S + 
Sbjct: 457 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 516

Query: 459 PNIAVYNILVDELVKLGKIDDAKSFF-DLMVKKLKMDASSYQFIMKALSESGKMDEILNV 518
            +I +YNI++  +    K+DDA   F  L +K +K    +Y  ++  L + G + E   +
Sbjct: 517 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 576

Query: 519 VDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKER 559
              + +D            +R  L   +  + + KL+EE +R
Sbjct: 577 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV-KLIEELKR 606


HSP 3 Score: 110.5 bits (275), Expect = 6.5e-23
Identity = 89/362 (24.59%), Postives = 172/362 (47.51%), Query Frame = 1

Query: 202 FNPSPTTYRILIK-GLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGV 261
           F+    +YR  ++ GLVD  K + A++L  +MI     P  + +  L     ++   D V
Sbjct: 49  FSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 108

Query: 262 FKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKM------- 321
             L ++++ K       G+ + NL   Y +  M     +C +  +  +++ K+       
Sbjct: 109 LALCKQMELK-------GIAH-NL---YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 168

Query: 322 SAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKE 381
           + I ++++++ LC  G+  EAL L DRM +    P     +L + N +V+G C+ G+  E
Sbjct: 169 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP-----DLITINTLVNGLCLSGKEAE 228

Query: 382 AIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMD 441
           A+ + +KM +Y C P+ +++  ++  +C +G  A A  L   M+++ +  D   Y +++D
Sbjct: 229 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 288

Query: 442 SCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDD-AKSFFDLMVKKLKM 501
              K    D+A   F +M   G+  NI  YNIL+      G+ DD AK   D++ +K+  
Sbjct: 289 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 348

Query: 502 DASSYQFIMKALSESGKMDEI----LNVVDTLLDDDGIEFSEELQEFVR-GELRKENREE 550
           +  ++  ++ +  + GK+ E       ++   +  D I ++  +  F +   L K N+  
Sbjct: 349 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 393

BLAST of Csa3G239860 vs. Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 9.4e-38
Identity = 115/451 (25.50%), Postives = 204/451 (45.23%), Query Frame = 1

Query: 110 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPN 169
           L  E  + EA       +    +PT+ T+NA++N      K +D + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 170 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK 229
            +T+  + +      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 230 DEMIEKGFAPDPLIYHYLMGG-CVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGY 289
           +EM  KGF  D +IY  L+ G C      DG   L + +K K+     D V +  L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 290 FMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPP 349
             +    EA + ++E +     +    + Y S++D  C+  +  +A  + D M  +   P
Sbjct: 332 VKEGKLREAEELHKEMIQRG--ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 350 RHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAE 409
                N+ +FN++++GYC      + +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 410 AEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVD 469
           A+ L+  M  + V PD  +Y +L+D        + A   F K+  S +  +I +YNI++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 470 ELVKLGKIDDAKSFF-DLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIE 529
            +    K+DDA   F  L +K +K D  +Y  ++  L + G + E   +   + +D    
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 571

Query: 530 FSEELQEFVRGELRKENREEDLAKLVEEKER 559
                   +R  L + +  +  AKL+EE +R
Sbjct: 572 NGCTYNILIRAHLGEGDATKS-AKLIEEIKR 590


HSP 2 Score: 147.9 bits (372), Expect = 3.7e-34
Identity = 101/385 (26.23%), Postives = 177/385 (45.97%), Query Frame = 1

Query: 129 SNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDT 188
           S  RP +   + + +   R  +Y  +L L + +   G+  N+ T +++      CRK   
Sbjct: 66  SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125

Query: 189 AMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLM 248
           A     ++I    + P   T+  LI GL    ++  A+EL D M+E G  P  +  + L+
Sbjct: 126 AFSAMGKIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALV 185

Query: 249 GG-CVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGD 308
            G C+     D V  L + + E       + V YG ++K          AM+   +   +
Sbjct: 186 NGLCLNGKVSDAVL-LIDRMVET--GFQPNEVTYGPVLKVMCKSGQTALAMELLRKM--E 245

Query: 309 NSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCI 368
              +K+ A+ Y+ ++D LC++G    A  LF+ M       +    ++  +  ++ G+C 
Sbjct: 246 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-----EIKGFKADIIIYTTLIRGFCY 305

Query: 369 EGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFT 428
            GR+ +  ++   M   +  PD ++F+ LI+     G L EAE L+  M  +G++PD  T
Sbjct: 306 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 365

Query: 429 YGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM- 488
           Y  L+D   K+N+ D A      MV  G  PNI  +NIL++   K   IDD    F  M 
Sbjct: 366 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 425

Query: 489 VKKLKMDASSYQFIMKALSESGKMD 512
           ++ +  D  +Y  +++   E GK++
Sbjct: 426 LRGVVADTVTYNTLIQGFCELGKLE 439


HSP 3 Score: 132.5 bits (332), Expect = 1.6e-29
Identity = 100/422 (23.70%), Postives = 196/422 (46.45%), Query Frame = 1

Query: 100 RLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHR 159
           R   ++ +L L ++ +L+  A    H++Y        T++ ++N   R  K +   S   
Sbjct: 84  RTKQYDLVLDLCKQMELKGIA----HNLY--------TLSIMINCCCRCRKLSLAFSAMG 143

Query: 160 FITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN 219
            I + G  P+ +T + +        +   A+E   +++ +    P+  T   L+ GL  N
Sbjct: 144 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV-EMGHKPTLITLNALVNGLCLN 203

Query: 220 NKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGV 279
            K+  A+ L D M+E GF P+ + Y  ++    +S       +L  +++E+      D V
Sbjct: 204 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER--KIKLDAV 263

Query: 280 VYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFD 339
            Y  ++ G       + A   + E   +    K   I Y +++   C  G++ +   L  
Sbjct: 264 KYSIIIDGLCKDGSLDNAFNLFNEM--EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 323

Query: 340 RMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQ 399
            M K     R +  ++ +F+ ++D +  EG+ +EA E+ ++M      PDT+++ +LI+ 
Sbjct: 324 DMIK-----RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 383

Query: 400 LCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPN 459
            C    L +A  +   M  KG  P+  T+ +L++   K N  DD    FRKM   G+  +
Sbjct: 384 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 443

Query: 460 IAVYNILVDELVKLGKIDDAKSFFDLMV-KKLKMDASSYQFIMKALSESGKMDEILNVVD 519
              YN L+    +LGK++ AK  F  MV ++++ D  SY+ ++  L ++G+ ++ L + +
Sbjct: 444 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 483

Query: 520 TL 521
            +
Sbjct: 504 KI 483


HSP 4 Score: 77.8 bits (190), Expect = 4.7e-13
Identity = 62/262 (23.66%), Postives = 115/262 (43.89%), Query Frame = 1

Query: 263 LFEELKEKLGATVEDG---VVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYN 322
           LF     ++ ++V DG   V Y   ++   +   E++A+  ++E     S  +   I ++
Sbjct: 19  LFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMT--RSRPRPRLIDFS 78

Query: 323 SVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFE 382
            +   + R  ++   L L  +M       + +A NL + ++M++  C   +   A     
Sbjct: 79  RLFSVVARTKQYDLVLDLCKQMEL-----KGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 138

Query: 383 KMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKN 442
           K+      PDT++F+ LI  LC  G ++EA  L   M + G  P   T   L++      
Sbjct: 139 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 198

Query: 443 RADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQ 502
           +  DA     +MV++G +PN   Y  ++  + K G+   A      M  +K+K+DA  Y 
Sbjct: 199 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 258

Query: 503 FIMKALSESGKMDEILNVVDTL 521
            I+  L + G +D   N+ + +
Sbjct: 259 IIIDGLCKDGSLDNAFNLFNEM 273

BLAST of Csa3G239860 vs. TrEMBL
Match: M5X3R7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002582mg PE=4 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 1.2e-270
Identity = 474/627 (75.60%), Postives = 536/627 (85.49%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLT---GSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRL 60
           MALSKP F THL+TL      HH        P   ++LRFLSFA+ EEA AERRRRKRRL
Sbjct: 1   MALSKPTFLTHLRTLAKPPNCHH-----PTTPPSFISLRFLSFATPEEAAAERRRRKRRL 60

Query: 61  RIEPPLSSSSAARPLTQPPRSQTPQ-NPNAPKIPEHISALSGNRLNLHNRILTLIRENDL 120
           RIEPPLSS    +   Q  +S  PQ NPNAPK+PE +SALSGNRLNLHNRILTL+R+NDL
Sbjct: 61  RIEPPLSSLHRNQQQQQQQQSPKPQQNPNAPKLPEPVSALSGNRLNLHNRILTLVRQNDL 120

Query: 121 EEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLI 180
           EEAAL+TRHSIYSNCRPTIFTVN+VL AQLRQSKY+DLLSLHRFITQAGV PNIITHNLI
Sbjct: 121 EEAALYTRHSIYSNCRPTIFTVNSVLTAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLI 180

Query: 181 FQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKG 240
           FQTYLDCRKPDTAME+YKQLINDAPFNPSPTTYRILIKGLVDNNKL+RAMELK+E+  KG
Sbjct: 181 FQTYLDCRKPDTAMENYKQLINDAPFNPSPTTYRILIKGLVDNNKLDRAMELKEEIDAKG 240

Query: 241 FAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEE 300
           FAPDP++YHYLM GCV++ D DGVF+L+EELKEKLG  VEDG+VYGNLMKGYFM+ ME+E
Sbjct: 241 FAPDPVVYHYLMVGCVKNSDSDGVFRLYEELKEKLGGVVEDGIVYGNLMKGYFMRGMEKE 300

Query: 301 AMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLG 360
           AM+CYEE+ G++S VK SA+AYNSVLDAL +NGKF EAL LFDRM  EH PPR LAVNLG
Sbjct: 301 AMECYEESFGESSKVKTSAVAYNSVLDALSKNGKFDEALRLFDRMVAEHNPPRRLAVNLG 360

Query: 361 SFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTM 420
           SFNVM DGYC++GRFKEAIEVF KMGDYRC PDTLSFNNLIEQLC NGML+EAE LYG M
Sbjct: 361 SFNVMADGYCVQGRFKEAIEVFRKMGDYRCSPDTLSFNNLIEQLCKNGMLSEAEELYGEM 420

Query: 421 DDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKI 480
            DKGV PDEFTY LLMD+CF++NRADDAA YFRKMVD+ LRPN+AVYN LVD L+K+GK+
Sbjct: 421 SDKGVYPDEFTYVLLMDTCFEENRADDAAEYFRKMVDAKLRPNLAVYNRLVDGLIKVGKV 480

Query: 481 DDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFV 540
           D+AKSFFDLMVKKLKMD  SYQFIMK LSE+GK+DE+LNVVDT+LDDDG+EF+EELQEFV
Sbjct: 481 DEAKSFFDLMVKKLKMDIPSYQFIMKTLSEAGKLDEVLNVVDTMLDDDGVEFNEELQEFV 540

Query: 541 RGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEG 600
           +GELRKE RE+++ KL+EEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLF NKE 
Sbjct: 541 KGELRKEGREDEVGKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNKES 600

Query: 601 EKESVVNEMQSVEQEDDSGKTELAESS 624
           E  S     Q+ E   ++  T+ AE++
Sbjct: 601 ETGST----QATENAGEAASTQPAEAA 618

BLAST of Csa3G239860 vs. TrEMBL
Match: W9RP26_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006813 PE=4 SV=1)

HSP 1 Score: 908.3 bits (2346), Expect = 5.2e-261
Identity = 469/648 (72.38%), Postives = 531/648 (81.94%), Query Frame = 1

Query: 1   MALSKP-AFFTHLKTLTGSHHLLQRQALAPFP----IVTLRFLSFASAEEADAERRRRKR 60
           MALSKP AF THLKTL    H   R+ L+P P     V+LRFLSFA+ E+A AERRRRKR
Sbjct: 1   MALSKPNAFLTHLKTLAKPPH---RRFLSPPPPPPSFVSLRFLSFATPEDAAAERRRRKR 60

Query: 61  RLRIEPPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIREND 120
           RLRIEPPLSS    +   Q       +NPNAPK+P+H+SAL+GNRLNLHN+ILTLIREND
Sbjct: 61  RLRIEPPLSSLHRNQQQQQQSPPPPQRNPNAPKLPDHVSALTGNRLNLHNKILTLIREND 120

Query: 121 LEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNL 180
           LEEAAL+TRHSIYSNCRPTIFTVN+VLNA LRQSKY+DLLSLHRFITQAGV PNIITHNL
Sbjct: 121 LEEAALYTRHSIYSNCRPTIFTVNSVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNL 180

Query: 181 IFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEK 240
           +FQTYLDCRKPDTAMEHYKQLINDAPF+PSPTTYRIL+KGLVDNN+LERA+ELK+EM EK
Sbjct: 181 VFQTYLDCRKPDTAMEHYKQLINDAPFSPSPTTYRILVKGLVDNNRLERALELKEEMSEK 240

Query: 241 GFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEE 300
           G APDP +YHYLM GCVR+ D D VF L+EELK KLG  VEDGVVYG+LMK YF+K ME+
Sbjct: 241 GLAPDPTVYHYLMAGCVRNSDVDKVFDLYEELKGKLGGFVEDGVVYGSLMKAYFLKGMEK 300

Query: 301 EAMKCYEETVG---------------------DNSVVKMSAIAYNSVLDALCRNGKFGEA 360
           EAM+ +EE VG                     +NS VKMSA+AYNSVLDAL +NGKF EA
Sbjct: 301 EAMEIFEEAVGAGYFLKGIKKESMETFEEALAENSSVKMSAVAYNSVLDALSKNGKFDEA 360

Query: 361 LTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFN 420
           L LFDRM KEH PPR LAVNLG+FNV+ +GYC +GRF++AIEVF  MGDYRC PDTLSFN
Sbjct: 361 LKLFDRMKKEHNPPRRLAVNLGTFNVIAEGYCAQGRFRDAIEVFRTMGDYRCSPDTLSFN 420

Query: 421 NLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDS 480
            LIEQLCNNGML EAE LYG M +KGVNPDEFT+GLLMD+CFK+NR DDAA YFRKMVDS
Sbjct: 421 VLIEQLCNNGMLGEAEALYGEMGEKGVNPDEFTFGLLMDTCFKENRPDDAAGYFRKMVDS 480

Query: 481 GLRPNIAVYNILVDELVKLGKIDDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEIL 540
            LRPN+AVYN LVD LVK+GK+D+AKSFFDLMVKKLKMD  SY+FIMKALSESGK+DE+L
Sbjct: 481 KLRPNLAVYNRLVDGLVKVGKVDEAKSFFDLMVKKLKMDVPSYKFIMKALSESGKLDEVL 540

Query: 541 NVVDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQ 600
           NVVDT+LDDDG+EF+EE+QEFV+GELRKE RE++LAKL+EEKER KAEAKAKEAEAAEA 
Sbjct: 541 NVVDTMLDDDGVEFNEEVQEFVKGELRKEGREDELAKLIEEKERQKAEAKAKEAEAAEAA 600

Query: 601 KRSAKAAVSSLLSSKLFANKEGEKESVVNEMQSVEQEDDSGKTELAES 623
           KRSA+AAVSSLL SKLF +KE   ES   E        ++  TE + S
Sbjct: 601 KRSARAAVSSLLPSKLFGSKE-STESGSAEANGSPTVGEASSTESSSS 644

BLAST of Csa3G239860 vs. TrEMBL
Match: I1JYR8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G235800 PE=4 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 4.4e-252
Identity = 436/622 (70.10%), Postives = 521/622 (83.76%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           MALSK  F THL+TL+ SH         P   V++R LSF+S EEA AERRRRKR+LR+E
Sbjct: 1   MALSKATFLTHLRTLSNSHR-------RPSSCVSIRLLSFSSPEEAAAERRRRKRQLRME 60

Query: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLS+ +  +   +P +S    NPN PK+PEH+SAL+GNRLNLHNRILTLIRENDL+EAA
Sbjct: 61  PPLSALNRTQTAPKPLQSPYYLNPNNPKLPEHVSALTGNRLNLHNRILTLIRENDLDEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           L+TRHSIYSNCRPTIFT+NAVL A LRQS+Y+DLLSLHRFITQAGVVPNIITHNL+FQTY
Sbjct: 121 LYTRHSIYSNCRPTIFTINAVLAALLRQSRYSDLLSLHRFITQAGVVPNIITHNLVFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTA+EHYKQ +NDAP NPSPTTYR+LIKGL+DN+KLERAM++K EM  KGFAPD
Sbjct: 181 LDCRKPDTALEHYKQFLNDAPMNPSPTTYRVLIKGLIDNSKLERAMDIKTEMDSKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PL+YHYLM G  R  D D + +L+EEL+E+LG  V+DG+V+G LMKGYF+K ME+EAM+C
Sbjct: 241 PLVYHYLMLGHARVSDGDAILRLYEELRERLGGVVQDGIVFGCLMKGYFVKGMEKEAMEC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360
           YEE +G     KMSA+ YNSVLDAL +NG+F EAL LFDRM KEH P + L+VNLGSFNV
Sbjct: 301 YEEALGKK---KMSAVGYNSVLDALSKNGRFDEALRLFDRMMKEHEPLKRLSVNLGSFNV 360

Query: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420
           +VDGYC EGRF+EA+EVF KMG+YRC PDTLSFNNLI++LC+NG + EAE +YG M+ KG
Sbjct: 361 IVDGYCDEGRFEEAMEVFRKMGEYRCSPDTLSFNNLIDRLCDNGRIVEAEEVYGEMEGKG 420

Query: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480
           V+PDEFTYGLLMD+CF++NRADDAAAYFRKMVDSGLRPN+AVYN LV  LVK+GKID+AK
Sbjct: 421 VSPDEFTYGLLMDACFRENRADDAAAYFRKMVDSGLRPNLAVYNRLVGGLVKVGKIDEAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
            FF+LMVKKLKMD +SYQFIMK LS+ G++DE+L +VDTLLDD+G++F EE QEFV+GEL
Sbjct: 481 GFFELMVKKLKMDVTSYQFIMKVLSDEGRLDEMLKIVDTLLDDNGVDFDEEFQEFVKGEL 540

Query: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600
           RKE REE+L KL+EEKERLKAEAKAKE EAAEA KRSA+AAV+SLL SKLF NKE + ES
Sbjct: 541 RKEGREEELTKLMEEKERLKAEAKAKEIEAAEAAKRSARAAVASLLPSKLFGNKETDLES 600

Query: 601 V-VNEMQSVEQEDDSGKTELAE 622
               E+Q++ +E+ +     AE
Sbjct: 601 KREGEIQALNEENTNATASEAE 612

BLAST of Csa3G239860 vs. TrEMBL
Match: A0A061G122_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_015413 PE=4 SV=1)

HSP 1 Score: 876.3 bits (2263), Expect = 2.2e-251
Identity = 430/610 (70.49%), Postives = 505/610 (82.79%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           MALSKP F THL+ L   HH       +P   +T R LSF + EEA AERRRRKRRLR+E
Sbjct: 1   MALSKPTFLTHLQNLAKRHHR------SPPSFITFRHLSFNTPEEAAAERRRRKRRLRVE 60

Query: 61  PPLSSSSAARPLTQPPRSQTP-QNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEA 120
           PPLSS+  ++   Q      P QNPNAPKIPE ++ L+GNRLNLHN+IL LIRENDLEEA
Sbjct: 61  PPLSSAHRSKQQAQQVAPSKPIQNPNAPKIPEPVTVLTGNRLNLHNKILKLIRENDLEEA 120

Query: 121 ALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQT 180
           AL+TRHS+YSNCRPT++TVNAVLNAQLRQSKYADLLSLHRFIT AG+ PN+ITHNLIFQT
Sbjct: 121 ALYTRHSVYSNCRPTVYTVNAVLNAQLRQSKYADLLSLHRFITLAGIAPNVITHNLIFQT 180

Query: 181 YLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAP 240
           YLDC+KPDTA+EHYKQ  N++P NPSPTTYRIL+KGLVDN KLE+A+E+K+EM+EKG AP
Sbjct: 181 YLDCKKPDTALEHYKQFSNESPVNPSPTTYRILVKGLVDNGKLEKALEMKEEMVEKGLAP 240

Query: 241 DPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMK 300
           DP++Y YL+ GC +S D DG+FKLFEELKEK    +EDGV+YG LMKGYFM+ ME+EAM+
Sbjct: 241 DPVVYSYLILGCAKSGDSDGIFKLFEELKEKKDGVLEDGVIYGGLMKGYFMRGMEKEAME 300

Query: 301 CYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFN 360
           CYEE  G+NS VKMSA+AYN VLDAL +NGKF EAL LFDRM  EH PPR LAVNLGSFN
Sbjct: 301 CYEEACGENSKVKMSAVAYNYVLDALSKNGKFDEALRLFDRMKNEHSPPRRLAVNLGSFN 360

Query: 361 VMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDK 420
           V+ DGYC EG+FKEA+E F  MGDYRC PDTLSFNNLI+QLC NG+L EAE LYG M DK
Sbjct: 361 VIADGYCAEGKFKEAMEAFRLMGDYRCSPDTLSFNNLIDQLCQNGLLGEAEDLYGEMGDK 420

Query: 421 GVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDA 480
           GVNPDE+TY LLMD+CFK +R DD A+YFRKMV+SGLRPN+AVYN LVDELVK+GK+D+A
Sbjct: 421 GVNPDEYTYVLLMDACFKVDRIDDGASYFRKMVESGLRPNLAVYNRLVDELVKVGKVDEA 480

Query: 481 KSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGE 540
           KSF+D MVKKLKMD +SY+F++KALS+ GK+D +L +VD +LDD+ ++F+EELQEFV+ E
Sbjct: 481 KSFYDTMVKKLKMDDASYKFMIKALSDVGKLDVVLKMVDEMLDDESVDFNEELQEFVKEE 540

Query: 541 LRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKE 600
           LR E REEDL KL+EEKERLKAEAKA+E EAAEA KRSAKAAVSSLL SKLF  KE E +
Sbjct: 541 LRNEGREEDLTKLMEEKERLKAEAKAREIEAAEAAKRSAKAAVSSLLPSKLFGKKEDESQ 600

Query: 601 SVVNEMQSVE 610
           S      ++E
Sbjct: 601 STAANESTIE 604

BLAST of Csa3G239860 vs. TrEMBL
Match: A0A067K862_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13356 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 4.9e-251
Identity = 449/623 (72.07%), Postives = 516/623 (82.83%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           MALSKP  F HLKTL    H        P  I+T+R LSF+S+EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPTLFGHLKTLVAHRHRYHHN---PPSIITIRLLSFSSSEEAAAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPLTQPPRSQTP---QNPNAPKIPEHIS-ALSGNRLNLHNRILTLIRENDL 120
           PPLSS   ++   Q    Q P   QNPNAPK+PE IS  LSG R +LHNRIL LIRENDL
Sbjct: 61  PPLSSLHRSQQ-QQSQTQQIPKPIQNPNAPKLPEPISEVLSGKRNDLHNRILKLIRENDL 120

Query: 121 EEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLI 180
           EEAALFTRHS+YSNC+PTI+TVNAVLNAQLRQSKY+DLLSLHRFI QAGV PNIITHNLI
Sbjct: 121 EEAALFTRHSVYSNCKPTIYTVNAVLNAQLRQSKYSDLLSLHRFIIQAGVAPNIITHNLI 180

Query: 181 FQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIE-K 240
           FQTYLDCRKPDTA+EHYKQLINDAPFNPSPTTYRILIKGLVDN ++E+A+ELK+EM+E K
Sbjct: 181 FQTYLDCRKPDTALEHYKQLINDAPFNPSPTTYRILIKGLVDNGRIEKALELKEEMVEIK 240

Query: 241 GFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEE 300
           GF PDPL+YHYLM GCVR+ D DGVFKLFEELKEK G  VEDGVVYG L+K YFMK MEE
Sbjct: 241 GFTPDPLVYHYLMVGCVRNSDSDGVFKLFEELKEKTGGVVEDGVVYGALIKAYFMKGMEE 300

Query: 301 EAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNL 360
           EAM+ YEE VG+NS +KMSA+AYNSVLDALC+NGKF EAL LFDRM +EH PPR+LAVNL
Sbjct: 301 EAMEYYEEAVGENSKLKMSAVAYNSVLDALCKNGKFDEALKLFDRMIQEHNPPRNLAVNL 360

Query: 361 GSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGT 420
           GSFNVMVDGYC +GRF+EA+EVF KMGDYRC PD LSFNNLI+QLC NGML +AE LYG 
Sbjct: 361 GSFNVMVDGYCAQGRFEEAVEVFRKMGDYRCNPDVLSFNNLIDQLCKNGMLVKAEELYGE 420

Query: 421 MDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGK 480
           MD KGV  DE+TYGLLMD+CF+ +R DD AAYF+KMVDSGLRPN+AVYN LVD+LVK+GK
Sbjct: 421 MDGKGVKADEYTYGLLMDTCFENDRVDDGAAYFKKMVDSGLRPNLAVYNRLVDKLVKVGK 480

Query: 481 IDDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEF 540
           ID+AKSF+ LMVKKLKMD +SY+F+M AL+++  MDE+L +VD +LDD+ IEF  ELQEF
Sbjct: 481 IDEAKSFYYLMVKKLKMDNASYKFMMAALADARDMDELLKMVDGMLDDEAIEFDSELQEF 540

Query: 541 VRGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKE 600
            +  L ++ REE+L +L+E KER KAEAKAKEAEAAEA KRSAKAAV+SLL SKLF NK 
Sbjct: 541 AKELLGRDGREEELTELMERKEREKAEAKAKEAEAAEAAKRSAKAAVASLLPSKLFGNKG 600

Query: 601 GEKES-VVNEMQSVEQEDDSGKT 618
            E E+  V + ++VE+ +  G T
Sbjct: 601 KESETDSVEKKETVEEANIVGST 619

BLAST of Csa3G239860 vs. TAIR10
Match: AT3G49240.1 (AT3G49240.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 780.8 bits (2015), Expect = 6.3e-226
Identity = 390/616 (63.31%), Postives = 485/616 (78.73%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           M++SK AF  HL+TL+ S+    R  + P P + +R++SFA+ EEA AERRRRKRRLR+E
Sbjct: 1   MSISKAAFLNHLQTLSRSY----RHRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRME 60

Query: 61  PPLSSSSAARPLTQPPRSQTP---QNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLE 120
           PP++S + +    Q  +SQ P   QNPN PK+PE +SAL G RL+LHN IL LIRENDLE
Sbjct: 61  PPVNSFNRS----QQQQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLE 120

Query: 121 EAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIF 180
           EAAL+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+ PNIIT+NLIF
Sbjct: 121 EAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIF 180

Query: 181 QTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGF 240
           Q YLD RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+K++M  KGF
Sbjct: 181 QAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGF 240

Query: 241 APDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEA 300
             DP++Y YLM GCV++ D DGV KL++ELKEKLG  V+DGVVYG LMKGYFMKEME+EA
Sbjct: 241 VVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEA 300

Query: 301 MKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGS 360
           M+CYEE VG+NS V+MSA+AYN VL+AL  NGKF EAL LFD + KEH PPRHLAVNLG+
Sbjct: 301 MECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGT 360

Query: 361 FNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMD 420
           FNVMV+GYC  G+F+EA+EVF +MGD++C PDTLSFNNL+ QLC+N +LAEAE LYG M+
Sbjct: 361 FNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEME 420

Query: 421 DKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKID 480
           +K V PDE+TYGLLMD+CFK+ + D+ AAY++ MV+S LRPN+AVYN L D+L+K GK+D
Sbjct: 421 EKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLD 480

Query: 481 DAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVR 540
           DAKSFFD+MV KLKMD  +Y+FIM+ALSE+G++DE+L +VD +LDDD +  SEELQEFV+
Sbjct: 481 DAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVK 540

Query: 541 GELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSK-LFANKEG 600
            ELRK  RE DL KL+EEKERLKAEAKAKE   AE +K++    +++L+  K +   KE 
Sbjct: 541 EELRKGGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKET 600

Query: 601 EKESVVNEMQSVEQED 613
            K    NE   VE+ D
Sbjct: 601 AKLLWENEAGGVEEAD 608

BLAST of Csa3G239860 vs. TAIR10
Match: AT1G10270.1 (AT1G10270.1 glutamine-rich protein 23)

HSP 1 Score: 314.3 bits (804), Expect = 1.7e-85
Identity = 190/536 (35.45%), Postives = 295/536 (55.04%), Query Frame = 1

Query: 29  PFPIVTLRFLSFASAEEADAERRRRKRRLRIEPPLSSSSAARPLTQPPRSQTPQNPNAPK 88
           P+P +  R ++F+SAEEA AERRRRKRRLRIEPPL +     P   PP+    ++PNAP+
Sbjct: 79  PYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHALRRD-PSAPPPK----RDPNAPR 138

Query: 89  IPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQ 148
           +P+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ A  R 
Sbjct: 139 LPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYRA 198

Query: 149 SKYADLLSLHR-FITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPT 208
            +Y++ +SL + F  Q+ +VPN++++N I   + D    D A+E Y+ ++ +APF PS  
Sbjct: 199 KRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSV 258

Query: 209 TYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEEL 268
           TYR L KGLV   ++  A  L  EM+ KG A D  +Y+ L+ G +   D D   + F+EL
Sbjct: 259 TYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDEL 318

Query: 269 KEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCR 328
           K K   TV DG+V    M+ +F K  ++EAM+ Y   +  +   +M     N +L+   +
Sbjct: 319 KSK--CTVYDGIVNATFMEYWFEKGNDKEAMESYRSLL--DKKFRMHPPTGNVLLEVFLK 378

Query: 329 NGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCC 388
            GK  EA  LF+ M   H PP  L+VN  +  +MV+     G F EAI  F+K+G     
Sbjct: 379 FGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTS 438

Query: 389 P----DTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADD 448
                D L + N++ + C  GML EAE  +     + +  D  ++  ++D+  K  R DD
Sbjct: 439 KPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDD 498

Query: 449 AAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQFIMK 508
           A     +MVD  LR        +  EL+K GK+ ++      M  ++ K D S Y  +++
Sbjct: 499 AVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVR 558

Query: 509 ALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKER 559
            L +   +D+  ++V  ++  + +  +  L+EF+     K  R E++ K++    R
Sbjct: 559 GLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVAR 604

BLAST of Csa3G239860 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-42
Identity = 108/412 (26.21%), Postives = 196/412 (47.57%), Query Frame = 1

Query: 104 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQ 163
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 164 AGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLE 223
           +G VP++IT+N++   Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALS----VLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 224 RAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGN 283
           +AME+ D M+++   PD + Y  L+    R        KL +E++++ G T  D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR-GCT-PDVVTYNV 285

Query: 284 LMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTK 343
           L+ G   +   +EA+K   +    +S  + + I +N +L ++C  G++ +A  L   M +
Sbjct: 286 LVNGICKEGRLDEAIKFLNDM--PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 344 EHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNN 403
           +   P     ++ +FN++++  C +G    AI++ EKM  + C P++LS+N L+   C  
Sbjct: 346 KGFSP-----SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 405

Query: 404 GMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVY 463
             +  A      M  +G  PD  TY  ++ +  K  + +DA     ++   G  P +  Y
Sbjct: 406 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 465

Query: 464 NILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQFIMKALSESGKMDEIL 515
           N ++D L K GK   A    D M  K LK D  +Y  ++  LS  GK+DE +
Sbjct: 466 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504


HSP 2 Score: 122.5 bits (306), Expect = 9.4e-28
Identity = 88/397 (22.17%), Postives = 183/397 (46.10%), Query Frame = 1

Query: 104 HNRIL-TLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFIT 163
           +N IL +L     L++A       +  +C P + T   ++ A  R S     + L   + 
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266

Query: 164 QAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFN---PSPTTYRILIKGLVDN 223
             G  P+++T+N++        + D A++     +ND P +   P+  T+ I+++ +   
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIK----FLNDMPSSGCQPNVITHNIILRSMCST 326

Query: 224 NKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGV 283
            +   A +L  +M+ KGF+P  + ++ L+    R         + E++ +       + +
Sbjct: 327 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH--GCQPNSL 386

Query: 284 VYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFD 343
            Y  L+ G+  ++  + A++  E  V       +  + YN++L ALC++GK  +A+ + +
Sbjct: 387 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI--VTYNTMLTALCKDGKVEDAVEILN 446

Query: 344 RMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQ 403
           +++ +   P      L ++N ++DG    G+  +AI++ ++M      PDT+++++L+  
Sbjct: 447 QLSSKGCSPV-----LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGG 506

Query: 404 LCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPN 463
           L   G + EA   +   +  G+ P+  T+  +M    K  + D A  +   M++ G +PN
Sbjct: 507 LSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPN 566

Query: 464 IAVYNILVDELVKLGKIDDAKSFFDLMVKKLKMDASS 497
              Y IL++ L   G   +A    + +  K  M  SS
Sbjct: 567 ETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590


HSP 3 Score: 116.3 bits (290), Expect = 6.7e-26
Identity = 97/402 (24.13%), Postives = 176/402 (43.78%), Query Frame = 1

Query: 165 GVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLER 224
           G VP+II    + + +    K   A +   +++  +   P   TY ++I G     ++  
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAK-ILEILEGSGAVPDVITYNVMISGYCKAGEINN 191

Query: 225 AMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKL--GATVEDGVVYG 284
           A+ + D M     +PD + Y+ ++    RSL   G  K   E+ +++       D + Y 
Sbjct: 192 ALSVLDRM---SVSPDVVTYNTIL----RSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 251

Query: 285 NLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMT 344
            L++          AMK  +E + D        + YN +++ +C+ G+  EA+   + M 
Sbjct: 252 ILIEATCRDSGVGHAMKLLDE-MRDRGCTP-DVVTYNVLVNGICKEGRLDEAIKFLNDMP 311

Query: 345 KEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCN 404
                P     N+ + N+++   C  GR+ +A ++   M      P  ++FN LI  LC 
Sbjct: 312 SSGCQP-----NVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 371

Query: 405 NGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAV 464
            G+L  A  +   M   G  P+  +Y  L+    K+ + D A  Y  +MV  G  P+I  
Sbjct: 372 KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 431

Query: 465 YNILVDELVKLGKIDDAKSFFD-LMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTL- 524
           YN ++  L K GK++DA    + L  K       +Y  ++  L+++GK  + + ++D + 
Sbjct: 432 YNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMR 491

Query: 525 ---LDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKERL 560
              L  D I +S      + G L +E + ++  K   E ER+
Sbjct: 492 AKDLKPDTITYSS-----LVGGLSREGKVDEAIKFFHEFERM 513

BLAST of Csa3G239860 vs. TAIR10
Match: AT1G12300.1 (AT1G12300.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-40
Identity = 109/419 (26.01%), Postives = 198/419 (47.26%), Query Frame = 1

Query: 94  SALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYAD 153
           SA S   L+   R+ + + +   ++A    R  I+S   PT+   + + +A  +  +Y  
Sbjct: 47  SAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDL 106

Query: 154 LLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILI 213
           +L+L + +   G+  N+ T +++   +  CRK   A     ++I    + P+  T+  LI
Sbjct: 107 VLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK-LGYEPNTITFSTLI 166

Query: 214 KGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGA 273
            GL    ++  A+EL D M+E G  PD +  + L+ G   S        L +++ E    
Sbjct: 167 NGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY--G 226

Query: 274 TVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGE 333
              + V YG ++           AM+   +    N  +K+ A+ Y+ ++D LC++G    
Sbjct: 227 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN--IKLDAVKYSIIIDGLCKHGSLDN 286

Query: 334 ALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSF 393
           A  LF+ M       + +  N+ ++N+++ G+C  GR+ +  ++   M   +  P+ ++F
Sbjct: 287 AFNLFNEMEM-----KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 346

Query: 394 NNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVD 453
           + LI+     G L EAE L+  M  +G+ PD  TY  L+D   K+N  D A      MV 
Sbjct: 347 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 406

Query: 454 SGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQFIMKALSESGKMD 512
            G  PNI  +NIL++   K  +IDD    F  M ++ +  D  +Y  +++   E GK++
Sbjct: 407 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455


HSP 2 Score: 154.8 bits (390), Expect = 1.7e-37
Identity = 113/462 (24.46%), Postives = 203/462 (43.94%), Query Frame = 1

Query: 99  NRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLH 158
           N +     I  L  E  + EA       +    +P + T+N ++N      K A+ + L 
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216

Query: 159 RFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVD 218
             + + G  PN +T+  +        +   AME  +++  +         Y I+I GL  
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCK 276

Query: 219 NNKLERAMELKDEMIEKGFAPDPLIYHYLMGG-CVRSLDPDGVFKLFEELKEKLGATVED 278
           +  L+ A  L +EM  KG   + + Y+ L+GG C      DG   L + +K K+   V  
Sbjct: 277 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV-- 336

Query: 279 GVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTL 338
            V +  L+  +  +    EA + ++E +  +  +    I Y S++D  C+     +A  +
Sbjct: 337 -VTFSVLIDSFVKEGKLREAEELHKEMI--HRGIAPDTITYTSLIDGFCKENHLDKANQM 396

Query: 339 FDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLI 398
            D M  +   P     N+ +FN++++GYC   R  + +E+F KM       DT+++N LI
Sbjct: 397 VDLMVSKGCDP-----NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 456

Query: 399 EQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLR 458
           +  C  G L  A+ L+  M  + V P+  TY +L+D       ++ A   F K+  S + 
Sbjct: 457 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 516

Query: 459 PNIAVYNILVDELVKLGKIDDAKSFF-DLMVKKLKMDASSYQFIMKALSESGKMDEILNV 518
            +I +YNI++  +    K+DDA   F  L +K +K    +Y  ++  L + G + E   +
Sbjct: 517 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 576

Query: 519 VDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKER 559
              + +D            +R  L   +  + + KL+EE +R
Sbjct: 577 FRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV-KLIEELKR 606


HSP 3 Score: 110.5 bits (275), Expect = 3.7e-24
Identity = 89/362 (24.59%), Postives = 172/362 (47.51%), Query Frame = 1

Query: 202 FNPSPTTYRILIK-GLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGV 261
           F+    +YR  ++ GLVD  K + A++L  +MI     P  + +  L     ++   D V
Sbjct: 49  FSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 108

Query: 262 FKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKM------- 321
             L ++++ K       G+ + NL   Y +  M     +C +  +  +++ K+       
Sbjct: 109 LALCKQMELK-------GIAH-NL---YTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 168

Query: 322 SAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKE 381
           + I ++++++ LC  G+  EAL L DRM +    P     +L + N +V+G C+ G+  E
Sbjct: 169 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP-----DLITINTLVNGLCLSGKEAE 228

Query: 382 AIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMD 441
           A+ + +KM +Y C P+ +++  ++  +C +G  A A  L   M+++ +  D   Y +++D
Sbjct: 229 AMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIID 288

Query: 442 SCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDD-AKSFFDLMVKKLKM 501
              K    D+A   F +M   G+  NI  YNIL+      G+ DD AK   D++ +K+  
Sbjct: 289 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 348

Query: 502 DASSYQFIMKALSESGKMDEI----LNVVDTLLDDDGIEFSEELQEFVR-GELRKENREE 550
           +  ++  ++ +  + GK+ E       ++   +  D I ++  +  F +   L K N+  
Sbjct: 349 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 393

BLAST of Csa3G239860 vs. TAIR10
Match: AT1G12620.1 (AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 5.3e-39
Identity = 115/451 (25.50%), Postives = 204/451 (45.23%), Query Frame = 1

Query: 110 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPN 169
           L  E  + EA       +    +PT+ T+NA++N      K +D + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 170 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK 229
            +T+  + +      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 230 DEMIEKGFAPDPLIYHYLMGG-CVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGY 289
           +EM  KGF  D +IY  L+ G C      DG   L + +K K+     D V +  L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 290 FMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPP 349
             +    EA + ++E +     +    + Y S++D  C+  +  +A  + D M  +   P
Sbjct: 332 VKEGKLREAEELHKEMIQRG--ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 350 RHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAE 409
                N+ +FN++++GYC      + +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 410 AEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVD 469
           A+ L+  M  + V PD  +Y +L+D        + A   F K+  S +  +I +YNI++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 470 ELVKLGKIDDAKSFF-DLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIE 529
            +    K+DDA   F  L +K +K D  +Y  ++  L + G + E   +   + +D    
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 571

Query: 530 FSEELQEFVRGELRKENREEDLAKLVEEKER 559
                   +R  L + +  +  AKL+EE +R
Sbjct: 572 NGCTYNILIRAHLGEGDATKS-AKLIEEIKR 590


HSP 2 Score: 147.9 bits (372), Expect = 2.1e-35
Identity = 101/385 (26.23%), Postives = 177/385 (45.97%), Query Frame = 1

Query: 129 SNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDT 188
           S  RP +   + + +   R  +Y  +L L + +   G+  N+ T +++      CRK   
Sbjct: 66  SRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSL 125

Query: 189 AMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLM 248
           A     ++I    + P   T+  LI GL    ++  A+EL D M+E G  P  +  + L+
Sbjct: 126 AFSAMGKIIK-LGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALV 185

Query: 249 GG-CVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGD 308
            G C+     D V  L + + E       + V YG ++K          AM+   +   +
Sbjct: 186 NGLCLNGKVSDAVL-LIDRMVET--GFQPNEVTYGPVLKVMCKSGQTALAMELLRKM--E 245

Query: 309 NSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCI 368
              +K+ A+ Y+ ++D LC++G    A  LF+ M       +    ++  +  ++ G+C 
Sbjct: 246 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM-----EIKGFKADIIIYTTLIRGFCY 305

Query: 369 EGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFT 428
            GR+ +  ++   M   +  PD ++F+ LI+     G L EAE L+  M  +G++PD  T
Sbjct: 306 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 365

Query: 429 YGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM- 488
           Y  L+D   K+N+ D A      MV  G  PNI  +NIL++   K   IDD    F  M 
Sbjct: 366 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 425

Query: 489 VKKLKMDASSYQFIMKALSESGKMD 512
           ++ +  D  +Y  +++   E GK++
Sbjct: 426 LRGVVADTVTYNTLIQGFCELGKLE 439


HSP 3 Score: 132.5 bits (332), Expect = 9.0e-31
Identity = 100/422 (23.70%), Postives = 196/422 (46.45%), Query Frame = 1

Query: 100 RLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHR 159
           R   ++ +L L ++ +L+  A    H++Y        T++ ++N   R  K +   S   
Sbjct: 84  RTKQYDLVLDLCKQMELKGIA----HNLY--------TLSIMINCCCRCRKLSLAFSAMG 143

Query: 160 FITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN 219
            I + G  P+ +T + +        +   A+E   +++ +    P+  T   L+ GL  N
Sbjct: 144 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV-EMGHKPTLITLNALVNGLCLN 203

Query: 220 NKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGV 279
            K+  A+ L D M+E GF P+ + Y  ++    +S       +L  +++E+      D V
Sbjct: 204 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER--KIKLDAV 263

Query: 280 VYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFD 339
            Y  ++ G       + A   + E   +    K   I Y +++   C  G++ +   L  
Sbjct: 264 KYSIIIDGLCKDGSLDNAFNLFNEM--EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 323

Query: 340 RMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQ 399
            M K     R +  ++ +F+ ++D +  EG+ +EA E+ ++M      PDT+++ +LI+ 
Sbjct: 324 DMIK-----RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 383

Query: 400 LCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPN 459
            C    L +A  +   M  KG  P+  T+ +L++   K N  DD    FRKM   G+  +
Sbjct: 384 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 443

Query: 460 IAVYNILVDELVKLGKIDDAKSFFDLMV-KKLKMDASSYQFIMKALSESGKMDEILNVVD 519
              YN L+    +LGK++ AK  F  MV ++++ D  SY+ ++  L ++G+ ++ L + +
Sbjct: 444 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 483

Query: 520 TL 521
            +
Sbjct: 504 KI 483


HSP 4 Score: 77.8 bits (190), Expect = 2.6e-14
Identity = 62/262 (23.66%), Postives = 115/262 (43.89%), Query Frame = 1

Query: 263 LFEELKEKLGATVEDG---VVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYN 322
           LF     ++ ++V DG   V Y   ++   +   E++A+  ++E     S  +   I ++
Sbjct: 19  LFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMT--RSRPRPRLIDFS 78

Query: 323 SVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFE 382
            +   + R  ++   L L  +M       + +A NL + ++M++  C   +   A     
Sbjct: 79  RLFSVVARTKQYDLVLDLCKQMEL-----KGIAHNLYTLSIMINCCCRCRKLSLAFSAMG 138

Query: 383 KMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKN 442
           K+      PDT++F+ LI  LC  G ++EA  L   M + G  P   T   L++      
Sbjct: 139 KIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNG 198

Query: 443 RADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLM-VKKLKMDASSYQ 502
           +  DA     +MV++G +PN   Y  ++  + K G+   A      M  +K+K+DA  Y 
Sbjct: 199 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 258

Query: 503 FIMKALSESGKMDEILNVVDTL 521
            I+  L + G +D   N+ + +
Sbjct: 259 IIIDGLCKDGSLDNAFNLFNEM 273

BLAST of Csa3G239860 vs. NCBI nr
Match: gi|449456969|ref|XP_004146221.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis sativus])

HSP 1 Score: 1234.9 bits (3194), Expect = 0.0e+00
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360
           YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360

Query: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420
           MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG
Sbjct: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420

Query: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480
           VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK
Sbjct: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600
           RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES
Sbjct: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
           VVNEMQSVEQEDDSGKTELAESSP
Sbjct: 601 VVNEMQSVEQEDDSGKTELAESSP 624

BLAST of Csa3G239860 vs. NCBI nr
Match: gi|659133624|ref|XP_008466825.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis melo])

HSP 1 Score: 1165.6 bits (3014), Expect = 0.0e+00
Identity = 587/624 (94.07%), Postives = 604/624 (96.79%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           MALSKPAFFTHLKTLTGSHHLLQRQA AP PIVT RFLSFASAEEADAERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQAPAPLPIVTFRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARP +QP RSQTPQNPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPQSQPSRSQTPQNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN KLERAMELK+EMI KGFAPD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYGNLMKGYFMKEMEEEAMKC
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360
           YEETVGDN VVKMSAIAYNSVLDALC++GKF EALTLFDRMTKEHRPPRHLAVNLG+FNV
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGTFNV 360

Query: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420
           MVDGYCI+GRFKEAI VFE+MGDYRC PDTLSFNNLIEQLCNNGMLAEAEMLYGTM +KG
Sbjct: 361 MVDGYCIKGRFKEAIGVFEEMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEMLYGTMGEKG 420

Query: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480
           VNPDEFTYGLLM SCF+KNRADDAAAYFRKMVDSGLRPNIAVYNILV ELVKLGK+D+AK
Sbjct: 421 VNPDEFTYGLLMHSCFQKNRADDAAAYFRKMVDSGLRPNIAVYNILVGELVKLGKVDEAK 480

Query: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           SFFDLMVKKLKMDAS+YQFIMKALSESGKMDE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600
           RKE+REEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
           VVNEMQS +QEDD GKTELAES+P
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESNP 624

BLAST of Csa3G239860 vs. NCBI nr
Match: gi|596020758|ref|XP_007218947.1| (hypothetical protein PRUPE_ppa002582mg [Prunus persica])

HSP 1 Score: 940.3 bits (2429), Expect = 1.8e-270
Identity = 474/627 (75.60%), Postives = 536/627 (85.49%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLT---GSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRL 60
           MALSKP F THL+TL      HH        P   ++LRFLSFA+ EEA AERRRRKRRL
Sbjct: 1   MALSKPTFLTHLRTLAKPPNCHH-----PTTPPSFISLRFLSFATPEEAAAERRRRKRRL 60

Query: 61  RIEPPLSSSSAARPLTQPPRSQTPQ-NPNAPKIPEHISALSGNRLNLHNRILTLIRENDL 120
           RIEPPLSS    +   Q  +S  PQ NPNAPK+PE +SALSGNRLNLHNRILTL+R+NDL
Sbjct: 61  RIEPPLSSLHRNQQQQQQQQSPKPQQNPNAPKLPEPVSALSGNRLNLHNRILTLVRQNDL 120

Query: 121 EEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLI 180
           EEAAL+TRHSIYSNCRPTIFTVN+VL AQLRQSKY+DLLSLHRFITQAGV PNIITHNLI
Sbjct: 121 EEAALYTRHSIYSNCRPTIFTVNSVLTAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLI 180

Query: 181 FQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKG 240
           FQTYLDCRKPDTAME+YKQLINDAPFNPSPTTYRILIKGLVDNNKL+RAMELK+E+  KG
Sbjct: 181 FQTYLDCRKPDTAMENYKQLINDAPFNPSPTTYRILIKGLVDNNKLDRAMELKEEIDAKG 240

Query: 241 FAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEE 300
           FAPDP++YHYLM GCV++ D DGVF+L+EELKEKLG  VEDG+VYGNLMKGYFM+ ME+E
Sbjct: 241 FAPDPVVYHYLMVGCVKNSDSDGVFRLYEELKEKLGGVVEDGIVYGNLMKGYFMRGMEKE 300

Query: 301 AMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLG 360
           AM+CYEE+ G++S VK SA+AYNSVLDAL +NGKF EAL LFDRM  EH PPR LAVNLG
Sbjct: 301 AMECYEESFGESSKVKTSAVAYNSVLDALSKNGKFDEALRLFDRMVAEHNPPRRLAVNLG 360

Query: 361 SFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTM 420
           SFNVM DGYC++GRFKEAIEVF KMGDYRC PDTLSFNNLIEQLC NGML+EAE LYG M
Sbjct: 361 SFNVMADGYCVQGRFKEAIEVFRKMGDYRCSPDTLSFNNLIEQLCKNGMLSEAEELYGEM 420

Query: 421 DDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKI 480
            DKGV PDEFTY LLMD+CF++NRADDAA YFRKMVD+ LRPN+AVYN LVD L+K+GK+
Sbjct: 421 SDKGVYPDEFTYVLLMDTCFEENRADDAAEYFRKMVDAKLRPNLAVYNRLVDGLIKVGKV 480

Query: 481 DDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFV 540
           D+AKSFFDLMVKKLKMD  SYQFIMK LSE+GK+DE+LNVVDT+LDDDG+EF+EELQEFV
Sbjct: 481 DEAKSFFDLMVKKLKMDIPSYQFIMKTLSEAGKLDEVLNVVDTMLDDDGVEFNEELQEFV 540

Query: 541 RGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEG 600
           +GELRKE RE+++ KL+EEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLF NKE 
Sbjct: 541 KGELRKEGREDEVGKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNKES 600

Query: 601 EKESVVNEMQSVEQEDDSGKTELAESS 624
           E  S     Q+ E   ++  T+ AE++
Sbjct: 601 ETGST----QATENAGEAASTQPAEAA 618

BLAST of Csa3G239860 vs. NCBI nr
Match: gi|1009123239|ref|XP_015878436.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Ziziphus jujuba])

HSP 1 Score: 936.4 bits (2419), Expect = 2.6e-269
Identity = 471/623 (75.60%), Postives = 533/623 (85.55%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60
           MALSKP F  HLK+L   H  L+R    P   ++LRFLSFA+ EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPTFLIHLKSLNAPHRHLRRLPPPPSSFISLRFLSFATPEEAAAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPLTQPPRSQTP--QNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEE 120
           PPLSS    +   Q  ++Q+P  QNPNAPK+PE ++ALSGNRLNLHNRIL LIR+NDLEE
Sbjct: 61  PPLSSLHRTQQQQQQAQTQSPKPQNPNAPKLPEPVTALSGNRLNLHNRILELIRKNDLEE 120

Query: 121 AALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQ 180
           AAL+TRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQ
Sbjct: 121 AALYTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQ 180

Query: 181 TYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFA 240
           TYLDCRKPD AMEHYKQLINDAPFNPSPTTY+ILI GLVDNNKLERA+ELK+EM  KG  
Sbjct: 181 TYLDCRKPDIAMEHYKQLINDAPFNPSPTTYQILIAGLVDNNKLERALELKEEMDVKGIP 240

Query: 241 PDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAM 300
            +P++YH+LM GCV++ D DGVF+L+EELKEKLG +VEDGVVYG+LMKGYF++ ME+EAM
Sbjct: 241 ANPVVYHHLMLGCVKNSDADGVFRLYEELKEKLGGSVEDGVVYGSLMKGYFLRGMEKEAM 300

Query: 301 KCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSF 360
           +CYEE VG+NS VKMSA+AYNSVLDAL +NGKF EAL LFDRMTKEH PP+ LAVNLGSF
Sbjct: 301 ECYEEAVGENSKVKMSAVAYNSVLDALSKNGKFDEALGLFDRMTKEHNPPKRLAVNLGSF 360

Query: 361 NVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDD 420
           NVM DGYC +G FK+AIEVF KMGDYRC PD LSFNNLIEQLCNNG+L EAE LYG MD 
Sbjct: 361 NVMADGYCAQGSFKDAIEVFRKMGDYRCSPDALSFNNLIEQLCNNGLLTEAEELYGEMDG 420

Query: 421 KGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDD 480
           KGVNPDE+T+ LLMD+CFK+NR DDAA YFRKM+DS LRPN+AVYN LVD LVK+GKID+
Sbjct: 421 KGVNPDEYTFVLLMDACFKENRPDDAAEYFRKMIDSKLRPNLAVYNKLVDGLVKVGKIDE 480

Query: 481 AKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRG 540
           AKSFFDLMVKKLKMD  SY+FIMKALSESGK DE+LNVVDT+LDDDG+EF+EE+QEFV+G
Sbjct: 481 AKSFFDLMVKKLKMDVPSYEFIMKALSESGKFDEVLNVVDTMLDDDGVEFNEEVQEFVKG 540

Query: 541 ELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEK 600
           ELRKE RE+DL KL+EEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLF NKE + 
Sbjct: 541 ELRKEGREDDLVKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNKESDT 600

Query: 601 ESVVNEMQSVEQEDDSGKTELAE 622
            S      ++E    +GKT +AE
Sbjct: 601 GSAEANGNAIE----AGKTGIAE 619

BLAST of Csa3G239860 vs. NCBI nr
Match: gi|645258146|ref|XP_008234749.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Prunus mume])

HSP 1 Score: 934.5 bits (2414), Expect = 9.7e-269
Identity = 474/629 (75.36%), Postives = 537/629 (85.37%), Query Frame = 1

Query: 1   MALSKPAFFTHLKTLT---GSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRL 60
           MALSKP F THL+TL      HH        P   ++LRFLSFA+ EEA AERRRRKRRL
Sbjct: 1   MALSKPTFLTHLRTLAKPPNCHH-----PTPPPSFISLRFLSFATPEEAAAERRRRKRRL 60

Query: 61  RIEPPLSSSSAARPLTQPPRSQTP---QNPNAPKIPEHISALSGNRLNLHNRILTLIREN 120
           RIEPPLSS    +   Q  + Q+P   QNPNAPK+PE +SALSGNRLNLHNRILTL+R+N
Sbjct: 61  RIEPPLSSLHRNQQ-QQQQQQQSPKPQQNPNAPKLPEPVSALSGNRLNLHNRILTLVRQN 120

Query: 121 DLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHN 180
           DLEEAAL+TRHSIYSNCRPTIFTVN+VL AQLRQSKY+DLLSLHRFITQAGV PNIITHN
Sbjct: 121 DLEEAALYTRHSIYSNCRPTIFTVNSVLTAQLRQSKYSDLLSLHRFITQAGVAPNIITHN 180

Query: 181 LIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIE 240
           LIFQTYLDCRKPDTAME+YKQLINDAPFNPSPTTYRILIKGLVDNNKL+RAMELK+E+  
Sbjct: 181 LIFQTYLDCRKPDTAMENYKQLINDAPFNPSPTTYRILIKGLVDNNKLDRAMELKEEIDV 240

Query: 241 KGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEME 300
           KGFAPDP++YHYLM GCV++ D DGVFKL+EELKEKLG  VEDG+VYGNLMKGYFM+ ME
Sbjct: 241 KGFAPDPVVYHYLMVGCVKNSDSDGVFKLYEELKEKLGGVVEDGIVYGNLMKGYFMRGME 300

Query: 301 EEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVN 360
           +EAM+CYEE++ ++S VKMSA+AYNSVLDAL +NGKF EAL LFDRM  EH PPR LAVN
Sbjct: 301 KEAMECYEESLRESSKVKMSAVAYNSVLDALSKNGKFDEALRLFDRMVAEHNPPRRLAVN 360

Query: 361 LGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYG 420
           LGSFNVM DGYC EGRFKEAIEVF KMGDYRC PDTLSFNNLIEQLC NGML+EAE LYG
Sbjct: 361 LGSFNVMADGYCAEGRFKEAIEVFRKMGDYRCSPDTLSFNNLIEQLCKNGMLSEAEELYG 420

Query: 421 TMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLG 480
            M DKGVN DE+TY LLMD+CF++NRADDAA YFRKMVD+ LRPN+AVYN LVD L+K+G
Sbjct: 421 EMSDKGVNADEYTYVLLMDTCFEENRADDAAEYFRKMVDAKLRPNLAVYNRLVDGLIKVG 480

Query: 481 KIDDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQE 540
           K+D+AKSFFDLMVKKLKMD  SYQFIMK LSE+GK+DE+LNVV+T+LDDDG+EF+EELQE
Sbjct: 481 KVDEAKSFFDLMVKKLKMDIPSYQFIMKTLSEAGKLDEVLNVVNTMLDDDGVEFNEELQE 540

Query: 541 FVRGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANK 600
           FV+GE+RKE RE+++ KL+EEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLF NK
Sbjct: 541 FVKGEMRKEGREDEVGKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNK 600

Query: 601 EGEKESVVNEMQSVEQEDDSGKTELAESS 624
           E E  S     QS E   ++  T+ AE++
Sbjct: 601 ESETGST----QSTENAGEAASTQPAEAA 619

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP273_ARATH1.1e-22463.31Pentatricopeptide repeat-containing protein At3g49240 OS=Arabidopsis thaliana GN... [more]
PPR29_ARATH3.0e-8435.45Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana GN... [more]
PPR28_ARATH2.4e-4126.21Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PPR36_ARATH2.2e-3926.01Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
PPR37_ARATH9.4e-3825.50Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
M5X3R7_PRUPE1.2e-27075.60Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002582mg PE=4 SV=1[more]
W9RP26_9ROSA5.2e-26172.38Uncharacterized protein OS=Morus notabilis GN=L484_006813 PE=4 SV=1[more]
I1JYR8_SOYBN4.4e-25270.10Uncharacterized protein OS=Glycine max GN=GLYMA_04G235800 PE=4 SV=1[more]
A0A061G122_THECC2.2e-25170.49Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
A0A067K862_JATCU4.9e-25172.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13356 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G49240.16.3e-22663.31 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G10270.11.7e-8535.45 glutamine-rich protein 23[more]
AT1G09900.11.3e-4226.21 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G12300.11.3e-4026.01 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G12620.15.3e-3925.50 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449456969|ref|XP_004146221.1|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis sativu... [more]
gi|659133624|ref|XP_008466825.1|0.0e+0094.07PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis melo][more]
gi|596020758|ref|XP_007218947.1|1.8e-27075.60hypothetical protein PRUPE_ppa002582mg [Prunus persica][more]
gi|1009123239|ref|XP_015878436.1|2.6e-26975.60PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Ziziphus jujub... [more]
gi|645258146|ref|XP_008234749.1|9.7e-26975.36PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0010033 response to organic substance
biological_process GO:0048366 leaf development
biological_process GO:0048609 multicellular organismal reproductive process
biological_process GO:0071704 organic substance metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0050794 regulation of cellular process
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0010182 sugar mediated signaling pathway
biological_process GO:0044763 single-organism cellular process
biological_process GO:0009960 endosperm development
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006349 regulation of gene expression by genetic imprinting
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0009845 seed germination
biological_process GO:0009640 photomorphogenesis
biological_process GO:0051301 cell division
biological_process GO:0048825 cotyledon development
biological_process GO:0009560 embryo sac egg cell differentiation
biological_process GO:0010162 seed dormancy process
biological_process GO:0009933 meristem structural organization
biological_process GO:0019915 lipid storage
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009220 pyrimidine ribonucleotide biosynthetic process
biological_process GO:0010564 regulation of cell cycle process
biological_process GO:0009909 regulation of flower development
biological_process GO:0009737 response to abscisic acid
biological_process GO:0050826 response to freezing
cellular_component GO:0044444 cytoplasmic part
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU118279cucumber EST collection version 3.0transcribed_cluster
CU127334cucumber EST collection version 3.0transcribed_cluster
CU130373cucumber EST collection version 3.0transcribed_cluster
CU131678cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G239860.1Csa3G239860.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU118279CU118279transcribed_cluster
CU131678CU131678transcribed_cluster
CU127334CU127334transcribed_cluster
CU130373CU130373transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 317..344
score: 1.6E-7coord: 462..489
score: 5.6E-4coord: 279..303
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 353..381
score: 8.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 207..252
score: 6.1E-8coord: 388..436
score: 1.8
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 130..180
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 392..425
score: 1.6E-5coord: 426..460
score: 7.3E-7coord: 462..489
score: 3.8E-5coord: 317..344
score: 7.1E-8coord: 357..390
score: 6.2E-9coord: 208..240
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 389..423
score: 11.224coord: 169..199
score: 6.61coord: 240..270
score: 7.805coord: 354..388
score: 12.09coord: 424..458
score: 11.827coord: 277..311
score: 6.982coord: 205..239
score: 11.762coord: 493..528
score: 7.563coord: 134..168
score: 7.355coord: 459..489
score: 9.504coord: 314..348
score: 12
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 104..289
score: 1.8E-5coord: 290..518
score: 2.4
NoneNo IPR availableunknownCoilCoilcoord: 542..581
score: -coord: 591..611
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 50..534
score: 2.0E
NoneNo IPR availablePANTHERPTHR24015:SF237SUBFAMILY NOT NAMEDcoord: 50..534
score: 2.0E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 324..499
score: 1.94E-7coord: 178..380
score: 8.8

The following gene(s) are paralogous to this gene:

None