CmaCh16G000480 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh16G000480
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr16 : 209774 .. 211636 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATTATCGAAGCCGACTTTCTTCACACACCTCAGAACCCTAACCAGGTCCCAACATTTACTGCACCAGGCTCCGGCACCTCCCATCGTCACACTCCGATTTCTCTCCTTTGCATCACCGGAGGAAGCTGCTGCCGAACGACGCCGTCGAAAGCGCCGCCTCCGCATTGAGCCCCCGCTCTCTTCCTCCTCTGCCGCTCGCCCACAATCGCAGCCTTCTAAGCCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAACCGCATTCTTACTCTCATTCGTGAAAATGATCTTGAAGAGGCTGCGCTTTTCACCCGCCATTCCATTTACTCTAATTGTCGTCCCACGATCTTCACCGTCAATGCCGTTCTCAATGCACTGCTTCGTCAATCGAAATATTCCGATTTGCTTTCACTTCACCGGTTTATTACACAAGCTGGTGTTGCCCCCAATATAATCACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCGCCTTTCAACCCGTCGCCGACGACTTACAGGATCTTGATTAAAGGGTTGGTAGATAATAACAAGTTGGAGAGGGCAATGGAGCTGAAAGAGGAAATGACTATGAAGGGTTTTGTTCCCGACCCTCTTATTTATCTTTATCTGATGGTGGGTTGTGTGAGAAGTTCGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAGAAGTTGGGAGGGACTGTGGAAGATGGAGTTGTTTATGGGAGCCTGATGAAAGGGTACTTTATGAAAGAAATGGAGGAGGAAGCAATGAGGTGTTATGAGGAGACTGTGGGTGTTAATTCAGTGGTGAAGATGAGCGCCATTGCATACAATTCCGTGCTTGATGCATTATGCAAGAATGGGAAGTTTGGTGAGGCCTTGATGTTGTTTGATAGGATGACAAAGGAACACAGTCCCCCCAGGCGTCTGGCAGTGGACTTGGGAAGCTTTAATGTGATGGTTGATGGATACTGTATTGAAGGGAGGTTCAAAGATGCCATTGAAGTATTCGAGAAGATGGGTGATTATAGGTGTAGCCCAGATACATTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGATGCTGAGGAGCTTTATGGAACAATGGGCGATAAGGGAGTTAACCCTGACGAGTTTACTTACGGTTTGTTGATGGATTCTTGCTTTAAAGCGAACAGGCCAGATGATGCAGCTGGATACTTTAGAAAAATGGTTGAGTCCGGACTTAGACCGAATATAGCAGTTTACAATAGATTAGTGGATGAGCTGGTTAAATTGGGGAAGATTAACGAGGCAAAGGCTTTCTTTGACTTGATGGTAAAGAAGTTAAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAGGCGTTAAGTGAATCGGGGCAGCTGGATGAAATGCTAAATGTGGTTGATACTCTTCTGGATGATGATGGGATTGAATTTTCTGAAGAGTTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGACAGGGAAGGAGATTTAGGTAAACTAATGGAAGAGAAAGAAAGAGTGAAAGCTGAAGCGAAGGCAAAGGAGGCTGAGGCAGCAGAGGCACAGAAAAGAAGTGCAAAAGCTGCGGTCTCTTCTTTACTGTCATCCAAGTTGTTTGGGAACAAGGAAGGTGAGAAAGAATCTGCAGTGAACGAAATGCAATCTGGTCAAGAAGACAGTGGTAAAACTGAACTCGCGGAATCGAATCCTTGA

mRNA sequence

ATGGCATTATCGAAGCCGACTTTCTTCACACACCTCAGAACCCTAACCAGGTCCCAACATTTACTGCACCAGGCTCCGGCACCTCCCATCGTCACACTCCGATTTCTCTCCTTTGCATCACCGGAGGAAGCTGCTGCCGAACGACGCCGTCGAAAGCGCCGCCTCCGCATTGAGCCCCCGCTCTCTTCCTCCTCTGCCGCTCGCCCACAATCGCAGCCTTCTAAGCCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAACCGCATTCTTACTCTCATTCGTGAAAATGATCTTGAAGAGGCTGCGCTTTTCACCCGCCATTCCATTTACTCTAATTGTCGTCCCACGATCTTCACCGTCAATGCCGTTCTCAATGCACTGCTTCGTCAATCGAAATATTCCGATTTGCTTTCACTTCACCGGTTTATTACACAAGCTGGTGTTGCCCCCAATATAATCACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCGCCTTTCAACCCGTCGCCGACGACTTACAGGATCTTGATTAAAGGGTTGGTAGATAATAACAAGTTGGAGAGGGCAATGGAGCTGAAAGAGGAAATGACTATGAAGGGTTTTGTTCCCGACCCTCTTATTTATCTTTATCTGATGGTGGGTTGTGTGAGAAGTTCGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAGAAGTTGGGAGGGACTGTGGAAGATGGAGTTGTTTATGGGAGCCTGATGAAAGGGTACTTTATGAAAGAAATGGAGGAGGAAGCAATGAGGTGTTATGAGGAGACTGTGGGTGTTAATTCAGTGGTGAAGATGAGCGCCATTGCATACAATTCCGTGCTTGATGCATTATGCAAGAATGGGAAGTTTGGTGAGGCCTTGATGTTGTTTGATAGGATGACAAAGGAACACAGTCCCCCCAGGCGTCTGGCAGTGGACTTGGGAAGCTTTAATGTGATGGTTGATGGATACTGTATTGAAGGGAGGTTCAAAGATGCCATTGAAGTATTCGAGAAGATGGGTGATTATAGGTGTAGCCCAGATACATTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGATGCTGAGGAGCTTTATGGAACAATGGGCGATAAGGGAGTTAACCCTGACGAGTTTACTTACGGTTTGTTGATGGATTCTTGCTTTAAAGCGAACAGGCCAGATGATGCAGCTGGATACTTTAGAAAAATGGTTGAGTCCGGACTTAGACCGAATATAGCAGTTTACAATAGATTAGTGGATGAGCTGGTTAAATTGGGGAAGATTAACGAGGCAAAGGCTTTCTTTGACTTGATGGTAAAGAAGTTAAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAGGCGTTAAGTGAATCGGGGCAGCTGGATGAAATGCTAAATGTGGTTGATACTCTTCTGGATGATGATGGGATTGAATTTTCTGAAGAGTTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGACAGGGAAGGAGATTTAGGTAAACTAATGGAAGAGAAAGAAAGAGTGAAAGCTGAAGCGAAGGCAAAGGAGGCTGAGGCAGCAGAGGCACAGAAAAGAAGTGCAAAAGCTGCGGTCTCTTCTTTACTGTCATCCAAGTTGTTTGGGAACAAGGAAGGTGAGAAAGAATCTGCAGTGAACGAAATGCAATCTGGTCAAGAAGACAGTGGTAAAACTGAACTCGCGGAATCGAATCCTTGA

Coding sequence (CDS)

ATGGCATTATCGAAGCCGACTTTCTTCACACACCTCAGAACCCTAACCAGGTCCCAACATTTACTGCACCAGGCTCCGGCACCTCCCATCGTCACACTCCGATTTCTCTCCTTTGCATCACCGGAGGAAGCTGCTGCCGAACGACGCCGTCGAAAGCGCCGCCTCCGCATTGAGCCCCCGCTCTCTTCCTCCTCTGCCGCTCGCCCACAATCGCAGCCTTCTAAGCCTCAATCCCCACAAAACCCTAATGCCCCCAAACTCCCTGAGCATATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAACCGCATTCTTACTCTCATTCGTGAAAATGATCTTGAAGAGGCTGCGCTTTTCACCCGCCATTCCATTTACTCTAATTGTCGTCCCACGATCTTCACCGTCAATGCCGTTCTCAATGCACTGCTTCGTCAATCGAAATATTCCGATTTGCTTTCACTTCACCGGTTTATTACACAAGCTGGTGTTGCCCCCAATATAATCACTCACAATTTGATTTTTCAGACGTATTTGGATTGTCGTAAGCCGGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCGCCTTTCAACCCGTCGCCGACGACTTACAGGATCTTGATTAAAGGGTTGGTAGATAATAACAAGTTGGAGAGGGCAATGGAGCTGAAAGAGGAAATGACTATGAAGGGTTTTGTTCCCGACCCTCTTATTTATCTTTATCTGATGGTGGGTTGTGTGAGAAGTTCGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAGAAGTTGGGAGGGACTGTGGAAGATGGAGTTGTTTATGGGAGCCTGATGAAAGGGTACTTTATGAAAGAAATGGAGGAGGAAGCAATGAGGTGTTATGAGGAGACTGTGGGTGTTAATTCAGTGGTGAAGATGAGCGCCATTGCATACAATTCCGTGCTTGATGCATTATGCAAGAATGGGAAGTTTGGTGAGGCCTTGATGTTGTTTGATAGGATGACAAAGGAACACAGTCCCCCCAGGCGTCTGGCAGTGGACTTGGGAAGCTTTAATGTGATGGTTGATGGATACTGTATTGAAGGGAGGTTCAAAGATGCCATTGAAGTATTCGAGAAGATGGGTGATTATAGGTGTAGCCCAGATACATTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGATGCTGAGGAGCTTTATGGAACAATGGGCGATAAGGGAGTTAACCCTGACGAGTTTACTTACGGTTTGTTGATGGATTCTTGCTTTAAAGCGAACAGGCCAGATGATGCAGCTGGATACTTTAGAAAAATGGTTGAGTCCGGACTTAGACCGAATATAGCAGTTTACAATAGATTAGTGGATGAGCTGGTTAAATTGGGGAAGATTAACGAGGCAAAGGCTTTCTTTGACTTGATGGTAAAGAAGTTAAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAGGCGTTAAGTGAATCGGGGCAGCTGGATGAAATGCTAAATGTGGTTGATACTCTTCTGGATGATGATGGGATTGAATTTTCTGAAGAGTTGCAGGAGTTTGTCAGAGGTGAGCTGAGGAAGGAAGACAGGGAAGGAGATTTAGGTAAACTAATGGAAGAGAAAGAAAGAGTGAAAGCTGAAGCGAAGGCAAAGGAGGCTGAGGCAGCAGAGGCACAGAAAAGAAGTGCAAAAGCTGCGGTCTCTTCTTTACTGTCATCCAAGTTGTTTGGGAACAAGGAAGGTGAGAAAGAATCTGCAGTGAACGAAATGCAATCTGGTCAAGAAGACAGTGGTAAAACTGAACTCGCGGAATCGAATCCTTGA

Protein sequence

MALSKPTFFTHLRTLTRSQHLLHQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDPLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGVNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKAFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELRKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESAVNEMQSGQEDSGKTELAESNP
Homology
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BLAST of CmaCh16G000480 vs. Swiss-Prot
Match: PP273_ARATH (Pentatricopeptide repeat-containing protein At3g49240 OS=Arabidopsis thaliana GN=EMB1796 PE=2 SV=1)

HSP 1 Score: 763.8 bits (1971), Expect = 1.4e-219
Identity = 389/617 (63.05%), Postives = 492/617 (79.74%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLHQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEPP 60
           M++SK  F  HL+TL+RS    H+    P + +R++SFA+ EEAAAERRRRKRRLR+EPP
Sbjct: 1   MSISKAAFLNHLQTLSRSYR--HRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEPP 60

Query: 61  LSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALF 120
           ++S + ++ Q Q   P+  QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEAAL+
Sbjct: 61  VNSFNRSQ-QQQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAALY 120

Query: 121 TRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYLD 180
           TRHS+YSNCRPTIFTVN VL A LRQ+KY  LL LH FI QAG+APNIIT+NLIFQ YLD
Sbjct: 121 TRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLD 180

Query: 181 CRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDPL 240
            RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+KE+M +KGFV DP+
Sbjct: 181 VRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPV 240

Query: 241 IYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCYE 300
           +Y YLM+GCV++SD DGV KL++ELKEKLGG V+DGVVYG LMKGYFMKEME+EAM CYE
Sbjct: 241 VYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYE 300

Query: 301 ETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVMV 360
           E VG NS V+MSA+AYN VL+AL +NGKF EAL LFD + KEH+PPR LAV+LG+FNVMV
Sbjct: 301 EAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMV 360

Query: 361 DGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGVN 420
           +GYC  G+F++A+EVF +MGD++CSPDTLSFNNL+ QLC+N +LA+AE+LYG M +K V 
Sbjct: 361 NGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVK 420

Query: 421 PDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKAF 480
           PDE+TYGLLMD+CFK  + D+ A Y++ MVES LRPN+AVYNRL D+L+K GK+++AK+F
Sbjct: 421 PDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSF 480

Query: 481 FDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELRK 540
           FD+MV KLKMD  +Y+FIM+ALSE+G+LDEML +VD +LDDD +  SEELQEFV+ ELRK
Sbjct: 481 FDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRK 540

Query: 541 EDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESAV 600
             REGDL KLMEEKER+KAEAKAKE   AE +K++    +++L+  K    K+   +   
Sbjct: 541 GGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAKLLW 600

Query: 601 NEMQSGQEDSGKTELAE 618
                G E++   E+A+
Sbjct: 601 ENEAGGVEEADVVEMAK 614

[Close]
BLAST of CmaCh16G000480 vs. Swiss-Prot
Match: PPR29_ARATH (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana GN=GRP23 PE=1 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.4e-81
Identity = 193/541 (35.67%), Postives = 298/541 (55.08%), Query Frame = 1 

Query: 23  HQAPAP-PIVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSAARPQSQPSKPQSPQN 82
           H  P P P +  R ++F+S EEAAAERRRRKRRLRIEPPL +      +  PS P   ++
Sbjct: 74  HTPPIPYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHAL-----RRDPSAPPPKRD 133

Query: 83  PNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLN 142
           PNAP+LP+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ 
Sbjct: 134 PNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIA 193

Query: 143 ALLRQSKYSDLLSLHR-FITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPF 202
           A+ R  +YS+ +SL + F  Q+ + PN++++N I   + D    D A+E Y+ ++ +APF
Sbjct: 194 AMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPF 253

Query: 203 NPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDPLIYLYLMVGCVRSSDPDGVFK 262
            PS  TYR L KGLV   ++  A  L  EM  KG   D  +Y  L+ G +   D D   +
Sbjct: 254 APSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 313

Query: 263 LFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCYEETVGVNSVVKMSAIAYNSVL 322
            F+ELK K   TV DG+V  + M+ +F K  ++EAM  Y     ++   +M     N +L
Sbjct: 314 FFDELKSKC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSL--LDKKFRMHPPTGNVLL 373

Query: 323 DALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMG 382
           +   K GK  EA  LF+ M   H+PP  L+V+  +  +MV+     G F +AI  F+K+G
Sbjct: 374 EVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVG 433

Query: 383 DYRCSP----DTLSFNNLIEQLCNNGMLADAEELYGTMGDKGVNPDEFTYGLLMDSCFKA 442
               S     D L + N++ + C  GML +AE  +     + +  D  ++  ++D+  KA
Sbjct: 434 SKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKA 493

Query: 443 NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINE-AKAFFDLMVKKLKMDASSY 502
            R DDA     +MV+  LR       R+  EL+K GK+ E A+    +  ++ K D S Y
Sbjct: 494 ERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIY 553

Query: 503 QFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELRKEDREGDLGKLMEEKE 557
             +++ L +   LD+  ++V  ++  + +  +  L+EF+     K  R  ++ K++    
Sbjct: 554 DVVVRGLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVA 604

[Close]
BLAST of CmaCh16G000480 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 4.3e-43
Identity = 106/413 (25.67%), Postives = 199/413 (48.18%), Query Frame = 1 

Query: 102 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQ 161
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 162 AGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLE 221
           +G  P++IT+N++   Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALS----VLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 222 RAMELKEEMTMKGFVPDPLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGS 281
           +AME+ + M  +   PD + Y  L+    R S      KL +E++++  G   D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 282 LMKGYFMKEMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEA-LMLFDRMT 341
           L+ G   +   +EA++   +    +S  + + I +N +L ++C  G++ +A  +L D + 
Sbjct: 286 LVNGICKEGRLDEAIKFLNDMP--SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 342 KEHSPPRRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCN 401
           K  SP       + +FN++++  C +G    AI++ EKM  + C P++LS+N L+   C 
Sbjct: 346 KGFSP------SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 405

Query: 402 NGMLADAEELYGTMGDKGVNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAV 461
              +  A E    M  +G  PD  TY  ++ +  K  + +DA     ++   G  P +  
Sbjct: 406 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 465

Query: 462 YNRLVDELVKLGKINEA-KAFFDLMVKKLKMDASSYQFIMKALSESGQLDEML 513
           YN ++D L K GK  +A K   ++  K LK D  +Y  ++  LS  G++DE +
Sbjct: 466 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]
BLAST of CmaCh16G000480 vs. Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.2e-40
Identity = 111/418 (26.56%), Postives = 198/418 (47.37%), Query Frame = 1 

Query: 108 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPN 167
           L  E  + EA       +    +PT+ T+NA++N L    K SD + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 168 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK 227
            +T+  + +      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 228 EEMTMKGFVPDPLIYLYLMVG-CVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGY 287
            EM +KGF  D +IY  L+ G C      DG   L + +K K+     D V + +L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 288 FMKEMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPP 347
             +    EA   ++E +     +    + Y S++D  CK  +  +A  + D M  +   P
Sbjct: 332 VKEGKLREAEELHKEMI--QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 348 RRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAD 407
                ++ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 408 AEELYGTMGDKGVNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVD 467
           A+EL+  M  + V PD  +Y +L+D       P+ A   F K+ +S +  +I +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 468 ELVKLGKINEA-KAFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDG 524
            +    K+++A   F  L +K +K D  +Y  ++  L + G L E  +++   +++DG
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE-ADLLFRKMEEDG 557

[Close]
BLAST of CmaCh16G000480 vs. Swiss-Prot
Match: PPR97_ARATH (Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.9e-38
Identity = 105/417 (25.18%), Postives = 212/417 (50.84%), Query Frame = 1 

Query: 133 IFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYK 192
           ++T +  +N   R+S+ S  L++   + + G  P+I+T N +   +    +   A+    
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169

Query: 193 QLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDPLIYLYLMVGCVRS 252
           Q++ +  + P   T+  L+ GL  +NK   A+ L E M +KG  PD + Y  ++ G  + 
Sbjct: 170 QMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 229

Query: 253 SDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCYE--ETVGVNSVVK 312
            +PD    L  ++++  G    D V+Y +++ G    +  ++A   +   ET G+    K
Sbjct: 230 GEPDLALNLLNKMEK--GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI----K 289

Query: 313 MSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVMVDGYCIEGRFK 372
                YN ++  LC  G++ +A  L   M +++  P     DL  FN ++D +  EG+  
Sbjct: 290 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP-----DLVFFNALIDAFVKEGKLV 349

Query: 373 DAIEVFEKMGDYR-CSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGVNPDEFTYGLL 432
           +A +++++M   + C PD +++N LI+  C    + +  E++  M  +G+  +  TY  L
Sbjct: 350 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 409

Query: 433 MDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKAFFDLMVKK-L 492
           +   F+A   D+A   F++MV  G+ P+I  YN L+D L   G +  A   F+ M K+ +
Sbjct: 410 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 469

Query: 493 KMDASSYQFIMKALSESGQLDEMLNVVDTL----LDDDGIEFSEELQEFVRGELRKE 542
           K+D  +Y  +++AL ++G++++  ++  +L    +  + + ++  +  F R  L++E
Sbjct: 470 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514

[Close]
BLAST of CmaCh16G000480 vs. TrEMBL
Match: E5GB98_CUCME (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1067.4 bits (2759), Expect = 6.7e-309
Identity = 557/624 (89.26%), Postives = 585/624 (93.75%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLH-QAPAP-PIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKP FFTHL+TLT S HLL  QAPAP PIVT RFLSFAS EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQAPAPLPIVTFRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARPQSQPS+ Q+PQNPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPQSQPSRSQTPQNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN KLERAMELKEEM +KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300
           PLIY YLM GCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYG+LMKGYFMKEMEEEAM+C
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNV 360
           YEETVG N VVKMSAIAYNSVLDALCK+GKF EAL LFDRMTKEH PPR LAV+LG+FNV
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGTFNV 360

Query: 361 MVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKG 420
           MVDGYCI+GRFK+AI VFE+MGDYRCSPDTLSFNNLIEQLCNNGMLA+AE LYGTMG+KG
Sbjct: 361 MVDGYCIKGRFKEAIGVFEEMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEMLYGTMGEKG 420

Query: 421 VNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAK 480
           VNPDEFTYGLLM SCF+ NR DDAA YFRKMV+SGLRPNIAVYN LV ELVKLGK++EAK
Sbjct: 421 VNPDEFTYGLLMHSCFQKNRADDAAAYFRKMVDSGLRPNIAVYNILVGELVKLGKVDEAK 480

Query: 481 AFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540
           +FFDLMVKKLKMDAS+YQFIMKALSESG++DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKEDRE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AVNEMQSGQ--EDSGKTELAESNP 621
            VNEMQSGQ  +D GKTELAESNP
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESNP 624

[Close]
BLAST of CmaCh16G000480 vs. TrEMBL
Match: A0A0A0L7B2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239860 PE=4 SV=1)

HSP 1 Score: 1065.1 bits (2753), Expect = 3.3e-308
Identity = 559/624 (89.58%), Postives = 585/624 (93.75%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLH-QAPAP-PIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKP FFTHL+TLT S HLL  QA AP PIVTLRFLSFAS EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARP +QP + Q+PQNPNAPK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK+EM  KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240

Query: 241 PLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300
           PLIY YLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYG+LMKGYFMKEMEEEAM+C
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNV 360
           YEETVG NSVVKMSAIAYNSVLDALC+NGKFGEAL LFDRMTKEH PPR LAV+LGSFNV
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360

Query: 361 MVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKG 420
           MVDGYCIEGRFK+AIEVFEKMGDYRC PDTLSFNNLIEQLCNNGMLA+AE LYGTM DKG
Sbjct: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420

Query: 421 VNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAK 480
           VNPDEFTYGLLMDSCFK NR DDAA YFRKMV+SGLRPNIAVYN LVDELVKLGKI++AK
Sbjct: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480

Query: 481 AFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540
           +FFDLMVKKLKMDASSYQFIMKALSESG++DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKE+RE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AVNEMQS--GQEDSGKTELAESNP 621
            VNEMQS   ++DSGKTELAES+P
Sbjct: 601 VVNEMQSVEQEDDSGKTELAESSP 624

[Close]
BLAST of CmaCh16G000480 vs. TrEMBL
Match: M5X3R7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002582mg PE=4 SV=1)

HSP 1 Score: 934.9 bits (2415), Expect = 5.1e-269
Identity = 481/619 (77.71%), Postives = 542/619 (87.56%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLHQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEPP 60
           MALSKPTF THLRTL +  +  H    P  ++LRFLSFA+PEEAAAERRRRKRRLRIEPP
Sbjct: 1   MALSKPTFLTHLRTLAKPPNCHHPTTPPSFISLRFLSFATPEEAAAERRRRKRRLRIEPP 60

Query: 61  LSSSSAARPQSQPSK-PQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           LSS    + Q Q  + P+  QNPNAPKLPE +SALSGNRLNLHNRILTL+R+NDLEEAAL
Sbjct: 61  LSSLHRNQQQQQQQQSPKPQQNPNAPKLPEPVSALSGNRLNLHNRILTLVRQNDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           +TRHSIYSNCRPTIFTVN+VL A LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 YTRHSIYSNCRPTIFTVNSVLTAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240
           DCRKPDTAME+YKQLINDAPFNPSPTTYRILIKGLVDNNKL+RAMELKEE+  KGF PDP
Sbjct: 181 DCRKPDTAMENYKQLINDAPFNPSPTTYRILIKGLVDNNKLDRAMELKEEIDAKGFAPDP 240

Query: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300
           ++Y YLMVGCV++SD DGVF+L+EELKEKLGG VEDG+VYG+LMKGYFM+ ME+EAM CY
Sbjct: 241 VVYHYLMVGCVKNSDSDGVFRLYEELKEKLGGVVEDGIVYGNLMKGYFMRGMEKEAMECY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360
           EE+ G +S VK SA+AYNSVLDAL KNGKF EAL LFDRM  EH+PPRRLAV+LGSFNVM
Sbjct: 301 EESFGESSKVKTSAVAYNSVLDALSKNGKFDEALRLFDRMVAEHNPPRRLAVNLGSFNVM 360

Query: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420
            DGYC++GRFK+AIEVF KMGDYRCSPDTLSFNNLIEQLC NGML++AEELYG M DKGV
Sbjct: 361 ADGYCVQGRFKEAIEVFRKMGDYRCSPDTLSFNNLIEQLCKNGMLSEAEELYGEMSDKGV 420

Query: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480
            PDEFTY LLMD+CF+ NR DDAA YFRKMV++ LRPN+AVYNRLVD L+K+GK++EAK+
Sbjct: 421 YPDEFTYVLLMDTCFEENRADDAAEYFRKMVDAKLRPNLAVYNRLVDGLIKVGKVDEAKS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMD  SYQFIMK LSE+G+LDE+LNVVDT+LDDDG+EF+EELQEFV+GELR
Sbjct: 481 FFDLMVKKLKMDIPSYQFIMKTLSEAGKLDEVLNVVDTMLDDDGVEFNEELQEFVKGELR 540

Query: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE RE ++GKLMEEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLFGNKE E  S 
Sbjct: 541 KEGREDEVGKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNKESETGST 600

Query: 601 VNEMQSGQEDSGKTELAES 619
                +G  ++  T+ AE+
Sbjct: 601 QATENAG--EAASTQPAEA 617

[Close]
BLAST of CmaCh16G000480 vs. TrEMBL
Match: W9RP26_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006813 PE=4 SV=1)

HSP 1 Score: 911.8 bits (2355), Expect = 4.7e-262
Identity = 478/644 (74.22%), Postives = 539/644 (83.70%), Query Frame = 1 

Query: 1   MALSKPT-FFTHLRTLTRSQHLLHQAPAPP---IVTLRFLSFASPEEAAAERRRRKRRLR 60
           MALSKP  F THL+TL +  H    +P PP    V+LRFLSFA+PE+AAAERRRRKRRLR
Sbjct: 1   MALSKPNAFLTHLKTLAKPPHRRFLSPPPPPPSFVSLRFLSFATPEDAAAERRRRKRRLR 60

Query: 61  IEPPLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEE 120
           IEPPLSS    + Q Q S P   +NPNAPKLP+H+SAL+GNRLNLHN+ILTLIRENDLEE
Sbjct: 61  IEPPLSSLHRNQQQQQQSPPPPQRNPNAPKLPDHVSALTGNRLNLHNKILTLIRENDLEE 120

Query: 121 AALFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQ 180
           AAL+TRHSIYSNCRPTIFTVN+VLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNL+FQ
Sbjct: 121 AALYTRHSIYSNCRPTIFTVNSVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLVFQ 180

Query: 181 TYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFV 240
           TYLDCRKPDTAMEHYKQLINDAPF+PSPTTYRIL+KGLVDNN+LERA+ELKEEM+ KG  
Sbjct: 181 TYLDCRKPDTAMEHYKQLINDAPFSPSPTTYRILVKGLVDNNRLERALELKEEMSEKGLA 240

Query: 241 PDPLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAM 300
           PDP +Y YLM GCVR+SD D VF L+EELK KLGG VEDGVVYGSLMK YF+K ME+EAM
Sbjct: 241 PDPTVYHYLMAGCVRNSDVDKVFDLYEELKGKLGGFVEDGVVYGSLMKAYFLKGMEKEAM 300

Query: 301 RCYEETVGV---------------------NSVVKMSAIAYNSVLDALCKNGKFGEALML 360
             +EE VG                      NS VKMSA+AYNSVLDAL KNGKF EAL L
Sbjct: 301 EIFEEAVGAGYFLKGIKKESMETFEEALAENSSVKMSAVAYNSVLDALSKNGKFDEALKL 360

Query: 361 FDRMTKEHSPPRRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLI 420
           FDRM KEH+PPRRLAV+LG+FNV+ +GYC +GRF+DAIEVF  MGDYRCSPDTLSFN LI
Sbjct: 361 FDRMKKEHNPPRRLAVNLGTFNVIAEGYCAQGRFRDAIEVFRTMGDYRCSPDTLSFNVLI 420

Query: 421 EQLCNNGMLADAEELYGTMGDKGVNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLR 480
           EQLCNNGML +AE LYG MG+KGVNPDEFT+GLLMD+CFK NRPDDAAGYFRKMV+S LR
Sbjct: 421 EQLCNNGMLGEAEALYGEMGEKGVNPDEFTFGLLMDTCFKENRPDDAAGYFRKMVDSKLR 480

Query: 481 PNIAVYNRLVDELVKLGKINEAKAFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVV 540
           PN+AVYNRLVD LVK+GK++EAK+FFDLMVKKLKMD  SY+FIMKALSESG+LDE+LNVV
Sbjct: 481 PNLAVYNRLVDGLVKVGKVDEAKSFFDLMVKKLKMDVPSYKFIMKALSESGKLDEVLNVV 540

Query: 541 DTLLDDDGIEFSEELQEFVRGELRKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRS 600
           DT+LDDDG+EF+EE+QEFV+GELRKE RE +L KL+EEKER KAEAKAKEAEAAEA KRS
Sbjct: 541 DTMLDDDGVEFNEEVQEFVKGELRKEGREDELAKLIEEKERQKAEAKAKEAEAAEAAKRS 600

Query: 601 AKAAVSSLLSSKLFGNKEGEKESAVNEMQSGQEDSGKTELAESN 620
           A+AAVSSLL SKLFG+KE  +  +     +G    G+    ES+
Sbjct: 601 ARAAVSSLLPSKLFGSKESTESGSAE--ANGSPTVGEASSTESS 642

[Close]
BLAST of CmaCh16G000480 vs. TrEMBL
Match: A0A061G122_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_015413 PE=4 SV=1)

HSP 1 Score: 867.8 bits (2241), Expect = 7.7e-249
Identity = 440/621 (70.85%), Postives = 520/621 (83.74%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLHQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEPP 60
           MALSKPTF THL+ L +  H   ++P P  +T R LSF +PEEAAAERRRRKRRLR+EPP
Sbjct: 1   MALSKPTFLTHLQNLAKRHH---RSP-PSFITFRHLSFNTPEEAAAERRRRKRRLRVEPP 60

Query: 61  LSSSSAARPQSQPSKPQSP-QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           LSS+  ++ Q+Q   P  P QNPNAPK+PE ++ L+GNRLNLHN+IL LIRENDLEEAAL
Sbjct: 61  LSSAHRSKQQAQQVAPSKPIQNPNAPKIPEPVTVLTGNRLNLHNKILKLIRENDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           +TRHS+YSNCRPT++TVNAVLNA LRQSKY+DLLSLHRFIT AG+APN+ITHNLIFQTYL
Sbjct: 121 YTRHSVYSNCRPTVYTVNAVLNAQLRQSKYADLLSLHRFITLAGIAPNVITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240
           DC+KPDTA+EHYKQ  N++P NPSPTTYRIL+KGLVDN KLE+A+E+KEEM  KG  PDP
Sbjct: 181 DCKKPDTALEHYKQFSNESPVNPSPTTYRILVKGLVDNGKLEKALEMKEEMVEKGLAPDP 240

Query: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300
           ++Y YL++GC +S D DG+FKLFEELKEK  G +EDGV+YG LMKGYFM+ ME+EAM CY
Sbjct: 241 VVYSYLILGCAKSGDSDGIFKLFEELKEKKDGVLEDGVIYGGLMKGYFMRGMEKEAMECY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360
           EE  G NS VKMSA+AYN VLDAL KNGKF EAL LFDRM  EHSPPRRLAV+LGSFNV+
Sbjct: 301 EEACGENSKVKMSAVAYNYVLDALSKNGKFDEALRLFDRMKNEHSPPRRLAVNLGSFNVI 360

Query: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420
            DGYC EG+FK+A+E F  MGDYRCSPDTLSFNNLI+QLC NG+L +AE+LYG MGDKGV
Sbjct: 361 ADGYCAEGKFKEAMEAFRLMGDYRCSPDTLSFNNLIDQLCQNGLLGEAEDLYGEMGDKGV 420

Query: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480
           NPDE+TY LLMD+CFK +R DD A YFRKMVESGLRPN+AVYNRLVDELVK+GK++EAK+
Sbjct: 421 NPDEYTYVLLMDACFKVDRIDDGASYFRKMVESGLRPNLAVYNRLVDELVKVGKVDEAKS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           F+D MVKKLKMD +SY+F++KALS+ G+LD +L +VD +LDD+ ++F+EELQEFV+ ELR
Sbjct: 481 FYDTMVKKLKMDDASYKFMIKALSDVGKLDVVLKMVDEMLDDESVDFNEELQEFVKEELR 540

Query: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES- 600
            E RE DL KLMEEKER+KAEAKA+E EAAEA KRSAKAAVSSLL SKLFG KE E +S 
Sbjct: 541 NEGREEDLTKLMEEKERLKAEAKAREIEAAEAAKRSAKAAVSSLLPSKLFGKKEDESQST 600

Query: 601 AVNEMQSGQEDSGKTELAESN 620
           A NE        G+ +  + N
Sbjct: 601 AANESTIEAASEGEVQAQDVN 617

[Close]
BLAST of CmaCh16G000480 vs. TAIR10
Match: AT3G49240.1 (AT3G49240.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 763.8 bits (1971), Expect = 7.9e-221
Identity = 389/617 (63.05%), Postives = 492/617 (79.74%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLHQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEPP 60
           M++SK  F  HL+TL+RS    H+    P + +R++SFA+ EEAAAERRRRKRRLR+EPP
Sbjct: 1   MSISKAAFLNHLQTLSRSYR--HRVLPQPFLAVRYMSFATQEEAAAERRRRKRRLRMEPP 60

Query: 61  LSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALF 120
           ++S + ++ Q Q   P+  QNPN PKLPE +SAL G RL+LHN IL LIRENDLEEAAL+
Sbjct: 61  VNSFNRSQ-QQQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLEEAALY 120

Query: 121 TRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYLD 180
           TRHS+YSNCRPTIFTVN VL A LRQ+KY  LL LH FI QAG+APNIIT+NLIFQ YLD
Sbjct: 121 TRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLD 180

Query: 181 CRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDPL 240
            RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+KE+M +KGFV DP+
Sbjct: 181 VRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPV 240

Query: 241 IYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCYE 300
           +Y YLM+GCV++SD DGV KL++ELKEKLGG V+DGVVYG LMKGYFMKEME+EAM CYE
Sbjct: 241 VYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYE 300

Query: 301 ETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVMV 360
           E VG NS V+MSA+AYN VL+AL +NGKF EAL LFD + KEH+PPR LAV+LG+FNVMV
Sbjct: 301 EAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMV 360

Query: 361 DGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGVN 420
           +GYC  G+F++A+EVF +MGD++CSPDTLSFNNL+ QLC+N +LA+AE+LYG M +K V 
Sbjct: 361 NGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVK 420

Query: 421 PDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKAF 480
           PDE+TYGLLMD+CFK  + D+ A Y++ MVES LRPN+AVYNRL D+L+K GK+++AK+F
Sbjct: 421 PDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSF 480

Query: 481 FDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELRK 540
           FD+MV KLKMD  +Y+FIM+ALSE+G+LDEML +VD +LDDD +  SEELQEFV+ ELRK
Sbjct: 481 FDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRK 540

Query: 541 EDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESAV 600
             REGDL KLMEEKER+KAEAKAKE   AE +K++    +++L+  K    K+   +   
Sbjct: 541 GGREGDLEKLMEEKERLKAEAKAKELADAEEKKKAQSINIAALIPPKAVEEKKETAKLLW 600

Query: 601 NEMQSGQEDSGKTELAE 618
                G E++   E+A+
Sbjct: 601 ENEAGGVEEADVVEMAK 614

[Close]
BLAST of CmaCh16G000480 vs. TAIR10
Match: AT1G10270.1 (AT1G10270.1 glutamine-rich protein 23)

HSP 1 Score: 305.4 bits (781), Expect = 7.7e-83
Identity = 193/541 (35.67%), Postives = 298/541 (55.08%), Query Frame = 1 

Query: 23  HQAPAP-PIVTLRFLSFASPEEAAAERRRRKRRLRIEPPLSSSSAARPQSQPSKPQSPQN 82
           H  P P P +  R ++F+S EEAAAERRRRKRRLRIEPPL +      +  PS P   ++
Sbjct: 74  HTPPIPYPPIPHRTMAFSSAEEAAAERRRRKRRLRIEPPLHAL-----RRDPSAPPPKRD 133

Query: 83  PNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLN 142
           PNAP+LP+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ 
Sbjct: 134 PNAPRLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIA 193

Query: 143 ALLRQSKYSDLLSLHR-FITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPF 202
           A+ R  +YS+ +SL + F  Q+ + PN++++N I   + D    D A+E Y+ ++ +APF
Sbjct: 194 AMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPF 253

Query: 203 NPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDPLIYLYLMVGCVRSSDPDGVFK 262
            PS  TYR L KGLV   ++  A  L  EM  KG   D  +Y  L+ G +   D D   +
Sbjct: 254 APSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVE 313

Query: 263 LFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCYEETVGVNSVVKMSAIAYNSVL 322
            F+ELK K   TV DG+V  + M+ +F K  ++EAM  Y     ++   +M     N +L
Sbjct: 314 FFDELKSKC--TVYDGIVNATFMEYWFEKGNDKEAMESYRSL--LDKKFRMHPPTGNVLL 373

Query: 323 DALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMG 382
           +   K GK  EA  LF+ M   H+PP  L+V+  +  +MV+     G F +AI  F+K+G
Sbjct: 374 EVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVG 433

Query: 383 DYRCSP----DTLSFNNLIEQLCNNGMLADAEELYGTMGDKGVNPDEFTYGLLMDSCFKA 442
               S     D L + N++ + C  GML +AE  +     + +  D  ++  ++D+  KA
Sbjct: 434 SKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKA 493

Query: 443 NRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINE-AKAFFDLMVKKLKMDASSY 502
            R DDA     +MV+  LR       R+  EL+K GK+ E A+    +  ++ K D S Y
Sbjct: 494 ERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIY 553

Query: 503 QFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELRKEDREGDLGKLMEEKE 557
             +++ L +   LD+  ++V  ++  + +  +  L+EF+     K  R  ++ K++    
Sbjct: 554 DVVVRGLCDGDALDQAKDIVGEMIRHN-VGVTTVLREFIIEVFEKAGRREEIEKILNSVA 604

[Close]
BLAST of CmaCh16G000480 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 177.6 bits (449), Expect = 2.4e-44
Identity = 106/413 (25.67%), Postives = 199/413 (48.18%), Query Frame = 1 

Query: 102 HNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQ 161
           +N +  ++R  +LEE   F  + +Y    P I     ++    R  K      +   +  
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165

Query: 162 AGVAPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLE 221
           +G  P++IT+N++   Y    + + A+     +++    +P   TY  +++ L D+ KL+
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALS----VLDRMSVSPDVVTYNTILRSLCDSGKLK 225

Query: 222 RAMELKEEMTMKGFVPDPLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGS 281
           +AME+ + M  +   PD + Y  L+    R S      KL +E++++  G   D V Y  
Sbjct: 226 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR--GCTPDVVTYNV 285

Query: 282 LMKGYFMKEMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEA-LMLFDRMT 341
           L+ G   +   +EA++   +    +S  + + I +N +L ++C  G++ +A  +L D + 
Sbjct: 286 LVNGICKEGRLDEAIKFLNDMP--SSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 345

Query: 342 KEHSPPRRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCN 401
           K  SP       + +FN++++  C +G    AI++ EKM  + C P++LS+N L+   C 
Sbjct: 346 KGFSP------SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 405

Query: 402 NGMLADAEELYGTMGDKGVNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAV 461
              +  A E    M  +G  PD  TY  ++ +  K  + +DA     ++   G  P +  
Sbjct: 406 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 465

Query: 462 YNRLVDELVKLGKINEA-KAFFDLMVKKLKMDASSYQFIMKALSESGQLDEML 513
           YN ++D L K GK  +A K   ++  K LK D  +Y  ++  LS  G++DE +
Sbjct: 466 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504

[Close]
BLAST of CmaCh16G000480 vs. TAIR10
Match: AT1G12620.1 (AT1G12620.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 169.5 bits (428), Expect = 6.6e-42
Identity = 111/418 (26.56%), Postives = 198/418 (47.37%), Query Frame = 1 

Query: 108 LIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPN 167
           L  E  + EA       +    +PT+ T+NA++N L    K SD + L   + + G  PN
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211

Query: 168 IITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK 227
            +T+  + +      +   AME  +++  +         Y I+I GL  +  L+ A  L 
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKM-EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 271

Query: 228 EEMTMKGFVPDPLIYLYLMVG-CVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGY 287
            EM +KGF  D +IY  L+ G C      DG   L + +K K+     D V + +L+  +
Sbjct: 272 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCF 331

Query: 288 FMKEMEEEAMRCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPP 347
             +    EA   ++E +     +    + Y S++D  CK  +  +A  + D M  +   P
Sbjct: 332 VKEGKLREAEELHKEMI--QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 391

Query: 348 RRLAVDLGSFNVMVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLAD 407
                ++ +FN++++GYC      D +E+F KM       DT+++N LI+  C  G L  
Sbjct: 392 -----NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 451

Query: 408 AEELYGTMGDKGVNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVD 467
           A+EL+  M  + V PD  +Y +L+D       P+ A   F K+ +S +  +I +YN ++ 
Sbjct: 452 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 511

Query: 468 ELVKLGKINEA-KAFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDG 524
            +    K+++A   F  L +K +K D  +Y  ++  L + G L E  +++   +++DG
Sbjct: 512 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSE-ADLLFRKMEEDG 557

[Close]
BLAST of CmaCh16G000480 vs. TAIR10
Match: AT1G63070.1 (AT1G63070.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-39
Identity = 105/417 (25.18%), Postives = 212/417 (50.84%), Query Frame = 1 

Query: 133 IFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYLDCRKPDTAMEHYK 192
           ++T +  +N   R+S+ S  L++   + + G  P+I+T N +   +    +   A+    
Sbjct: 110 LYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVD 169

Query: 193 QLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDPLIYLYLMVGCVRS 252
           Q++ +  + P   T+  L+ GL  +NK   A+ L E M +KG  PD + Y  ++ G  + 
Sbjct: 170 QMV-EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 229

Query: 253 SDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCYE--ETVGVNSVVK 312
            +PD    L  ++++  G    D V+Y +++ G    +  ++A   +   ET G+    K
Sbjct: 230 GEPDLALNLLNKMEK--GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI----K 289

Query: 313 MSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVMVDGYCIEGRFK 372
                YN ++  LC  G++ +A  L   M +++  P     DL  FN ++D +  EG+  
Sbjct: 290 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINP-----DLVFFNALIDAFVKEGKLV 349

Query: 373 DAIEVFEKMGDYR-CSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGVNPDEFTYGLL 432
           +A +++++M   + C PD +++N LI+  C    + +  E++  M  +G+  +  TY  L
Sbjct: 350 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 409

Query: 433 MDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKAFFDLMVKK-L 492
           +   F+A   D+A   F++MV  G+ P+I  YN L+D L   G +  A   F+ M K+ +
Sbjct: 410 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDM 469

Query: 493 KMDASSYQFIMKALSESGQLDEMLNVVDTL----LDDDGIEFSEELQEFVRGELRKE 542
           K+D  +Y  +++AL ++G++++  ++  +L    +  + + ++  +  F R  L++E
Sbjct: 470 KLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514

[Close]
BLAST of CmaCh16G000480 vs. NCBI nr
Match: gi|659133624|ref|XP_008466825.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis melo])

HSP 1 Score: 1067.4 bits (2759), Expect = 9.5e-309
Identity = 557/624 (89.26%), Postives = 585/624 (93.75%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLH-QAPAP-PIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKP FFTHL+TLT S HLL  QAPAP PIVT RFLSFAS EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQAPAPLPIVTFRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARPQSQPS+ Q+PQNPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPQSQPSRSQTPQNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN KLERAMELKEEM +KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300
           PLIY YLM GCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYG+LMKGYFMKEMEEEAM+C
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNV 360
           YEETVG N VVKMSAIAYNSVLDALCK+GKF EAL LFDRMTKEH PPR LAV+LG+FNV
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGTFNV 360

Query: 361 MVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKG 420
           MVDGYCI+GRFK+AI VFE+MGDYRCSPDTLSFNNLIEQLCNNGMLA+AE LYGTMG+KG
Sbjct: 361 MVDGYCIKGRFKEAIGVFEEMGDYRCSPDTLSFNNLIEQLCNNGMLAEAEMLYGTMGEKG 420

Query: 421 VNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAK 480
           VNPDEFTYGLLM SCF+ NR DDAA YFRKMV+SGLRPNIAVYN LV ELVKLGK++EAK
Sbjct: 421 VNPDEFTYGLLMHSCFQKNRADDAAAYFRKMVDSGLRPNIAVYNILVGELVKLGKVDEAK 480

Query: 481 AFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540
           +FFDLMVKKLKMDAS+YQFIMKALSESG++DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKEDRE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AVNEMQSGQ--EDSGKTELAESNP 621
            VNEMQSGQ  +D GKTELAESNP
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESNP 624

[Close]
BLAST of CmaCh16G000480 vs. NCBI nr
Match: gi|449456969|ref|XP_004146221.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis sativus])

HSP 1 Score: 1065.1 bits (2753), Expect = 4.7e-308
Identity = 559/624 (89.58%), Postives = 585/624 (93.75%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLH-QAPAP-PIVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKP FFTHL+TLT S HLL  QA AP PIVTLRFLSFAS EEA AERRRRKRRLRIE
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           PPLSSSSAARP +QP + Q+PQNPNAPK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  PPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK+EM  KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240

Query: 241 PLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300
           PLIY YLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYG+LMKGYFMKEMEEEAM+C
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNV 360
           YEETVG NSVVKMSAIAYNSVLDALC+NGKFGEAL LFDRMTKEH PPR LAV+LGSFNV
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNV 360

Query: 361 MVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKG 420
           MVDGYCIEGRFK+AIEVFEKMGDYRC PDTLSFNNLIEQLCNNGMLA+AE LYGTM DKG
Sbjct: 361 MVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKG 420

Query: 421 VNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAK 480
           VNPDEFTYGLLMDSCFK NR DDAA YFRKMV+SGLRPNIAVYN LVDELVKLGKI++AK
Sbjct: 421 VNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAK 480

Query: 481 AFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540
           +FFDLMVKKLKMDASSYQFIMKALSESG++DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 SFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKE+RE DL KL+EEKER+KAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLF NKEGEKES
Sbjct: 541 RKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKES 600

Query: 601 AVNEMQS--GQEDSGKTELAESNP 621
            VNEMQS   ++DSGKTELAES+P
Sbjct: 601 VVNEMQSVEQEDDSGKTELAESSP 624

[Close]
BLAST of CmaCh16G000480 vs. NCBI nr
Match: gi|645258146|ref|XP_008234749.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Prunus mume])

HSP 1 Score: 937.6 bits (2422), Expect = 1.1e-269
Identity = 481/620 (77.58%), Postives = 545/620 (87.90%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLHQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEPP 60
           MALSKPTF THLRTL +  +  H  P P  ++LRFLSFA+PEEAAAERRRRKRRLRIEPP
Sbjct: 1   MALSKPTFLTHLRTLAKPPNCHHPTPPPSFISLRFLSFATPEEAAAERRRRKRRLRIEPP 60

Query: 61  LSS--SSAARPQSQPSKPQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           LSS   +  + Q Q   P+  QNPNAPKLPE +SALSGNRLNLHNRILTL+R+NDLEEAA
Sbjct: 61  LSSLHRNQQQQQQQQQSPKPQQNPNAPKLPEPVSALSGNRLNLHNRILTLVRQNDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180
           L+TRHSIYSNCRPTIFTVN+VL A LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY
Sbjct: 121 LYTRHSIYSNCRPTIFTVNSVLTAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPD 240
           LDCRKPDTAME+YKQLINDAPFNPSPTTYRILIKGLVDNNKL+RAMELKEE+ +KGF PD
Sbjct: 181 LDCRKPDTAMENYKQLINDAPFNPSPTTYRILIKGLVDNNKLDRAMELKEEIDVKGFAPD 240

Query: 241 PLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300
           P++Y YLMVGCV++SD DGVFKL+EELKEKLGG VEDG+VYG+LMKGYFM+ ME+EAM C
Sbjct: 241 PVVYHYLMVGCVKNSDSDGVFKLYEELKEKLGGVVEDGIVYGNLMKGYFMRGMEKEAMEC 300

Query: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNV 360
           YEE++  +S VKMSA+AYNSVLDAL KNGKF EAL LFDRM  EH+PPRRLAV+LGSFNV
Sbjct: 301 YEESLRESSKVKMSAVAYNSVLDALSKNGKFDEALRLFDRMVAEHNPPRRLAVNLGSFNV 360

Query: 361 MVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKG 420
           M DGYC EGRFK+AIEVF KMGDYRCSPDTLSFNNLIEQLC NGML++AEELYG M DKG
Sbjct: 361 MADGYCAEGRFKEAIEVFRKMGDYRCSPDTLSFNNLIEQLCKNGMLSEAEELYGEMSDKG 420

Query: 421 VNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAK 480
           VN DE+TY LLMD+CF+ NR DDAA YFRKMV++ LRPN+AVYNRLVD L+K+GK++EAK
Sbjct: 421 VNADEYTYVLLMDTCFEENRADDAAEYFRKMVDAKLRPNLAVYNRLVDGLIKVGKVDEAK 480

Query: 481 AFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540
           +FFDLMVKKLKMD  SYQFIMK LSE+G+LDE+LNVV+T+LDDDG+EF+EELQEFV+GE+
Sbjct: 481 SFFDLMVKKLKMDIPSYQFIMKTLSEAGKLDEVLNVVNTMLDDDGVEFNEELQEFVKGEM 540

Query: 541 RKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKES 600
           RKE RE ++GKLMEEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLFGNKE E  S
Sbjct: 541 RKEGREDEVGKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNKESETGS 600

Query: 601 AVNEMQSGQEDSGKTELAES 619
             +   +G  ++  T+ AE+
Sbjct: 601 TQSTENAG--EAASTQPAEA 618

[Close]
BLAST of CmaCh16G000480 vs. NCBI nr
Match: gi|596020758|ref|XP_007218947.1| (hypothetical protein PRUPE_ppa002582mg [Prunus persica])

HSP 1 Score: 934.9 bits (2415), Expect = 7.4e-269
Identity = 481/619 (77.71%), Postives = 542/619 (87.56%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLHQAPAPPIVTLRFLSFASPEEAAAERRRRKRRLRIEPP 60
           MALSKPTF THLRTL +  +  H    P  ++LRFLSFA+PEEAAAERRRRKRRLRIEPP
Sbjct: 1   MALSKPTFLTHLRTLAKPPNCHHPTTPPSFISLRFLSFATPEEAAAERRRRKRRLRIEPP 60

Query: 61  LSSSSAARPQSQPSK-PQSPQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAAL 120
           LSS    + Q Q  + P+  QNPNAPKLPE +SALSGNRLNLHNRILTL+R+NDLEEAAL
Sbjct: 61  LSSLHRNQQQQQQQQSPKPQQNPNAPKLPEPVSALSGNRLNLHNRILTLVRQNDLEEAAL 120

Query: 121 FTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180
           +TRHSIYSNCRPTIFTVN+VL A LRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL
Sbjct: 121 YTRHSIYSNCRPTIFTVNSVLTAQLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTYL 180

Query: 181 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPDP 240
           DCRKPDTAME+YKQLINDAPFNPSPTTYRILIKGLVDNNKL+RAMELKEE+  KGF PDP
Sbjct: 181 DCRKPDTAMENYKQLINDAPFNPSPTTYRILIKGLVDNNKLDRAMELKEEIDAKGFAPDP 240

Query: 241 LIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRCY 300
           ++Y YLMVGCV++SD DGVF+L+EELKEKLGG VEDG+VYG+LMKGYFM+ ME+EAM CY
Sbjct: 241 VVYHYLMVGCVKNSDSDGVFRLYEELKEKLGGVVEDGIVYGNLMKGYFMRGMEKEAMECY 300

Query: 301 EETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSFNVM 360
           EE+ G +S VK SA+AYNSVLDAL KNGKF EAL LFDRM  EH+PPRRLAV+LGSFNVM
Sbjct: 301 EESFGESSKVKTSAVAYNSVLDALSKNGKFDEALRLFDRMVAEHNPPRRLAVNLGSFNVM 360

Query: 361 VDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGDKGV 420
            DGYC++GRFK+AIEVF KMGDYRCSPDTLSFNNLIEQLC NGML++AEELYG M DKGV
Sbjct: 361 ADGYCVQGRFKEAIEVFRKMGDYRCSPDTLSFNNLIEQLCKNGMLSEAEELYGEMSDKGV 420

Query: 421 NPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINEAKA 480
            PDEFTY LLMD+CF+ NR DDAA YFRKMV++ LRPN+AVYNRLVD L+K+GK++EAK+
Sbjct: 421 YPDEFTYVLLMDTCFEENRADDAAEYFRKMVDAKLRPNLAVYNRLVDGLIKVGKVDEAKS 480

Query: 481 FFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGELR 540
           FFDLMVKKLKMD  SYQFIMK LSE+G+LDE+LNVVDT+LDDDG+EF+EELQEFV+GELR
Sbjct: 481 FFDLMVKKLKMDIPSYQFIMKTLSEAGKLDEVLNVVDTMLDDDGVEFNEELQEFVKGELR 540

Query: 541 KEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEKESA 600
           KE RE ++GKLMEEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLFGNKE E  S 
Sbjct: 541 KEGREDEVGKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNKESETGST 600

Query: 601 VNEMQSGQEDSGKTELAES 619
                +G  ++  T+ AE+
Sbjct: 601 QATENAG--EAASTQPAEA 617

[Close]
BLAST of CmaCh16G000480 vs. NCBI nr
Match: gi|1009123239|ref|XP_015878436.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Ziziphus jujuba])

HSP 1 Score: 933.7 bits (2412), Expect = 1.6e-268
Identity = 485/621 (78.10%), Postives = 544/621 (87.60%), Query Frame = 1 

Query: 1   MALSKPTFFTHLRTLTRSQHLLHQAPAPP--IVTLRFLSFASPEEAAAERRRRKRRLRIE 60
           MALSKPTF  HL++L      L + P PP   ++LRFLSFA+PEEAAAERRRRKRRLRIE
Sbjct: 1   MALSKPTFLIHLKSLNAPHRHLRRLPPPPSSFISLRFLSFATPEEAAAERRRRKRRLRIE 60

Query: 61  PPLSSSSAARPQSQPSKPQSP--QNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEE 120
           PPLSS    + Q Q ++ QSP  QNPNAPKLPE ++ALSGNRLNLHNRIL LIR+NDLEE
Sbjct: 61  PPLSSLHRTQQQQQQAQTQSPKPQNPNAPKLPEPVTALSGNRLNLHNRILELIRKNDLEE 120

Query: 121 AALFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQ 180
           AAL+TRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQ
Sbjct: 121 AALYTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQ 180

Query: 181 TYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFV 240
           TYLDCRKPD AMEHYKQLINDAPFNPSPTTY+ILI GLVDNNKLERA+ELKEEM +KG  
Sbjct: 181 TYLDCRKPDIAMEHYKQLINDAPFNPSPTTYQILIAGLVDNNKLERALELKEEMDVKGIP 240

Query: 241 PDPLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAM 300
            +P++Y +LM+GCV++SD DGVF+L+EELKEKLGG+VEDGVVYGSLMKGYF++ ME+EAM
Sbjct: 241 ANPVVYHHLMLGCVKNSDADGVFRLYEELKEKLGGSVEDGVVYGSLMKGYFLRGMEKEAM 300

Query: 301 RCYEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSF 360
            CYEE VG NS VKMSA+AYNSVLDAL KNGKF EAL LFDRMTKEH+PP+RLAV+LGSF
Sbjct: 301 ECYEEAVGENSKVKMSAVAYNSVLDALSKNGKFDEALGLFDRMTKEHNPPKRLAVNLGSF 360

Query: 361 NVMVDGYCIEGRFKDAIEVFEKMGDYRCSPDTLSFNNLIEQLCNNGMLADAEELYGTMGD 420
           NVM DGYC +G FKDAIEVF KMGDYRCSPD LSFNNLIEQLCNNG+L +AEELYG M  
Sbjct: 361 NVMADGYCAQGSFKDAIEVFRKMGDYRCSPDALSFNNLIEQLCNNGLLTEAEELYGEMDG 420

Query: 421 KGVNPDEFTYGLLMDSCFKANRPDDAAGYFRKMVESGLRPNIAVYNRLVDELVKLGKINE 480
           KGVNPDE+T+ LLMD+CFK NRPDDAA YFRKM++S LRPN+AVYN+LVD LVK+GKI+E
Sbjct: 421 KGVNPDEYTFVLLMDACFKENRPDDAAEYFRKMIDSKLRPNLAVYNKLVDGLVKVGKIDE 480

Query: 481 AKAFFDLMVKKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRG 540
           AK+FFDLMVKKLKMD  SY+FIMKALSESG+ DE+LNVVDT+LDDDG+EF+EE+QEFV+G
Sbjct: 481 AKSFFDLMVKKLKMDVPSYEFIMKALSESGKFDEVLNVVDTMLDDDGVEFNEEVQEFVKG 540

Query: 541 ELRKEDREGDLGKLMEEKERVKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFGNKEGEK 600
           ELRKE RE DL KLMEEKER KAEAKAKEAEAAEA KRSA+AAVSSLL SKLFGNKE + 
Sbjct: 541 ELRKEGREDDLVKLMEEKERQKAEAKAKEAEAAEAAKRSARAAVSSLLPSKLFGNKESDT 600

Query: 601 ESAVNEMQSGQEDSGKTELAE 618
            SA  E      ++GKT +AE
Sbjct: 601 GSA--EANGNAIEAGKTGIAE 619

The following BLAST results are available for this feature:
BLAST of CmaCh16G000480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP273_ARATH1.4e-21963.05Pentatricopeptide repeat-containing protein At3g49240 OS=Arabidopsis thaliana GN... [more]
PPR29_ARATH1.4e-8135.67Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana GN... [more]
PPR28_ARATH4.3e-4325.67Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PPR37_ARATH1.2e-4026.56Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN... [more]
PPR97_ARATH1.9e-3825.18Pentatricopeptide repeat-containing protein At1g63070, mitochondrial OS=Arabidop... [more]
BLAST of CmaCh16G000480 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GB98_CUCME6.7e-30989.26Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo PE=4 SV=... [more]
A0A0A0L7B2_CUCSA3.3e-30889.58Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239860 PE=4 SV=1[more]
M5X3R7_PRUPE5.1e-26977.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002582mg PE=4 SV=1[more]
W9RP26_9ROSA4.7e-26274.22Uncharacterized protein OS=Morus notabilis GN=L484_006813 PE=4 SV=1[more]
A0A061G122_THECC7.7e-24970.85Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao GN=TCM_... [more]
BLAST of CmaCh16G000480 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49240.17.9e-22163.05 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G10270.17.7e-8335.67 glutamine-rich protein 23[more]
AT1G09900.12.4e-4425.67 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT1G12620.16.6e-4226.56 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G63070.11.1e-3925.18 pentatricopeptide (PPR) repeat-containing protein[more]
BLAST of CmaCh16G000480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133624|ref|XP_008466825.1|9.5e-30989.26PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis melo][more]
gi|449456969|ref|XP_004146221.1|4.7e-30889.58PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis sativu... [more]
gi|645258146|ref|XP_008234749.1|1.1e-26977.58PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Prunus mume][more]
gi|596020758|ref|XP_007218947.1|7.4e-26977.71hypothetical protein PRUPE_ppa002582mg [Prunus persica][more]
gi|1009123239|ref|XP_015878436.1|1.6e-26878.10PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Ziziphus jujub... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:0009960 endosperm development
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0006349 regulation of gene expression by genetic imprinting
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh16G000480.1CmaCh16G000480.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 242..268
score: 0.13coord: 460..487
score: 0.013coord: 315..342
score: 7.4E-8coord: 206..235
score: 5.5E-4coord: 277..301
score:
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 352..379
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 386..434
score: 2.3
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 128..178
score: 0.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 355..388
score: 9.9E-9coord: 206..238
score: 2.5E-6coord: 460..487
score: 0.0022coord: 424..458
score: 5.3E-8coord: 315..343
score: 4.5E-8coord: 390..423
score: 3.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 132..166
score: 8.188coord: 457..487
score: 8.934coord: 387..421
score: 11.411coord: 167..197
score: 6.61coord: 275..309
score: 7.059coord: 238..268
score: 7.772coord: 312..346
score: 12.277coord: 491..526
score: 7.695coord: 203..237
score: 11.159coord: 352..386
score: 12.233coord: 422..456
score: 12
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 274..516
score: 9.7
NoneNo IPR availableunknownCoilCoilcoord: 540..579
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 59..532
score: 6.7E-265coord: 27..41
score: 6.7E
NoneNo IPR availablePANTHERPTHR24015:SF237SUBFAMILY NOT NAMEDcoord: 27..41
score: 6.7E-265coord: 59..532
score: 6.7E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 177..338
score: 2.46E-5coord: 322..499
score: 1.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh16G000480Cucsa.032120Cucumber (Gy14) v1cgycmaB0008
CmaCh16G000480Cla004254Watermelon (97103) v1cmawmB316
CmaCh16G000480Csa3G239860Cucumber (Chinese Long) v2cmacuB321
CmaCh16G000480MELO3C008493Melon (DHL92) v3.5.1cmameB296
CmaCh16G000480CSPI03G19850Wild cucumber (PI 183967)cmacpiB327
CmaCh16G000480CmoCh18G013630Cucurbita moschata (Rifu)cmacmoB326
CmaCh16G000480Lsi05G001010Bottle gourd (USVL1VR-Ls)cmalsiB318
CmaCh16G000480Cp4.1LG14g06710Cucurbita pepo (Zucchini)cmacpeB344
CmaCh16G000480Cp4.1LG09g00010Cucurbita pepo (Zucchini)cmacpeB339
CmaCh16G000480MELO3C008493.2Melon (DHL92) v3.6.1cmamedB347
CmaCh16G000480CsaV3_3G019910Cucumber (Chinese Long) v3cmacucB0374
CmaCh16G000480Cla97C05G091210Watermelon (97103) v2cmawmbB346
CmaCh16G000480Bhi01G001115Wax gourdcmawgoB0439
CmaCh16G000480CsGy3G019740Cucumber (Gy14) v2cgybcmaB333
CmaCh16G000480Carg15064Silver-seed gourdcarcmaB1366
CmaCh16G000480Carg20323Silver-seed gourdcarcmaB0753
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh16G000480Silver-seed gourdcarcmaB0713
CmaCh16G000480Silver-seed gourdcarcmaB0752
CmaCh16G000480Cucumber (Chinese Long) v3cmacucB0402
CmaCh16G000480Watermelon (97103) v2cmawmbB324
CmaCh16G000480Wax gourdcmawgoB0428
CmaCh16G000480Cucurbita maxima (Rimu)cmacmaB243
CmaCh16G000480Cucurbita maxima (Rimu)cmacmaB300
CmaCh16G000480Cucurbita maxima (Rimu)cmacmaB337
CmaCh16G000480Cucurbita maxima (Rimu)cmacmaB338
CmaCh16G000480Cucurbita maxima (Rimu)cmacmaB346
CmaCh16G000480Cucumber (Gy14) v1cgycmaB0600
CmaCh16G000480Cucurbita moschata (Rifu)cmacmoB319
CmaCh16G000480Cucurbita moschata (Rifu)cmacmoB322
CmaCh16G000480Cucurbita moschata (Rifu)cmacmoB327
CmaCh16G000480Cucurbita moschata (Rifu)cmacmoB333
CmaCh16G000480Wild cucumber (PI 183967)cmacpiB346
CmaCh16G000480Cucumber (Chinese Long) v2cmacuB342
CmaCh16G000480Melon (DHL92) v3.5.1cmameB283
CmaCh16G000480Watermelon (Charleston Gray)cmawcgB289
CmaCh16G000480Watermelon (Charleston Gray)cmawcgB295
CmaCh16G000480Watermelon (Charleston Gray)cmawcgB296
CmaCh16G000480Watermelon (97103) v1cmawmB318
CmaCh16G000480Cucurbita pepo (Zucchini)cmacpeB343
CmaCh16G000480Cucurbita pepo (Zucchini)cmacpeB358
CmaCh16G000480Bottle gourd (USVL1VR-Ls)cmalsiB298
CmaCh16G000480Cucumber (Gy14) v2cgybcmaB618
CmaCh16G000480Melon (DHL92) v3.6.1cmamedB326