CsGy3G019740 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G019740
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing protein
Location	Chr3 : 15887945 .. 15889819 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTATCGAAGCCGGCCTTCTTCACCCACCTCAAAACCCTAACCGGTTCCCACCATTTACTCCAGCGCCAAGCTCTGGCACCATTTCCTATCGTCACTCTCCGATTTCTCTCTTTTGCATCGGCTGAGGAAGCTGATGCCGAACGACGCCGTCGTAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCTTCCTCTGCCGCTCGTCCACTAACGCAGCCTCCTAGATCTCAAACCCCACAAAACCCTAATGCCCCGAAAATTCCTGAGCACATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAATCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGTCATTCAATTTATTCCAATTGTCGTCCCACCATCTTCACCGTCAATGCGGTTCTCAATGCACAGCTTCGTCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGTCCCTAATATAATCACTCACAATTTGATTTTTCAGACTTATTTGGATTGCCGTAAGCCTGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCGACGACTTATAGGATCTTGATTAAGGGGTTGGTAGACAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGACGAAATGATTGAGAAAGGTTTTGCTCCTGACCCTCTTATTTATCATTATCTGATGGGGGGATGTGTGAGAAGTTTGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAAAAGTTGGGAGCGACTGTGGAAGATGGAGTTGTTTATGGGAACTTGATGAAAGGGTATTTTATGAAAGAAATGGAAGAGGAAGCAATGAAGTGTTATGAGGAGACTGTGGGTGATAATTCAGTGGTGAAGATGAGTGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAATTTGGTGAGGCTTTGACATTGTTTGATAGGATGACAAAAGAGCATCGTCCGCCCAGGCATCTGGCAGTGAACTTGGGAAGCTTTAATGTTATGGTTGATGGGTACTGCATCGAAGGGAGGTTCAAAGAGGCCATTGAAGTATTTGAGAAGATGGGTGATTATAGGTGTTGCCCAGATACGTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAGATGCTTTACGGAACAATGGATGATAAGGGAGTAAACCCGGACGAGTTTACTTATGGTTTGTTGATGGATTCTTGCTTTAAAAAAAACAGGGCAGATGATGCAGCTGCATATTTTAGAAAAATGGTAGATTCTGGACTCAGACCCAATATAGCAGTTTATAATATATTAGTGGACGAGTTGGTTAAATTAGGGAAGATCGACGACGCAAAGTCTTTCTTTGATTTGATGGTGAAGAAGCTCAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAAGCGTTGAGTGAATCAGGAAAAATGGACGAAATACTAAATGTGGTCGATACCCTTCTTGATGATGATGGGATTGAATTTTCGGAAGAGCTGCAGGAGTTCGTGAGAGGTGAGTTGAGGAAGGAAAACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAAGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTTTCTTCTTTACTGTCATCCAAGTTGTTTGCGAACAAGGAAGGTGAGAAAGAATCTGTAGTGAATGAAATGCAATCTGTTGAACAAGAAGACGACAGTGGTAAAACTGAACTTGCGGAATCAAGTCCTTGA

mRNA sequence

ATGGCATTATCGAAGCCGGCCTTCTTCACCCACCTCAAAACCCTAACCGGTTCCCACCATTTACTCCAGCGCCAAGCTCTGGCACCATTTCCTATCGTCACTCTCCGATTTCTCTCTTTTGCATCGGCTGAGGAAGCTGATGCCGAACGACGCCGTCGTAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCTTCCTCTGCCGCTCGTCCACTAACGCAGCCTCCTAGATCTCAAACCCCACAAAACCCTAATGCCCCGAAAATTCCTGAGCACATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAATCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGTCATTCAATTTATTCCAATTGTCGTCCCACCATCTTCACCGTCAATGCGGTTCTCAATGCACAGCTTCGTCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGTCCCTAATATAATCACTCACAATTTGATTTTTCAGACTTATTTGGATTGCCGTAAGCCTGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCGACGACTTATAGGATCTTGATTAAGGGGTTGGTAGACAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGACGAAATGATTGAGAAAGGTTTTGCTCCTGACCCTCTTATTTATCATTATCTGATGGGGGGATGTGTGAGAAGTTTGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAAAAGTTGGGAGCGACTGTGGAAGATGGAGTTGTTTATGGGAACTTGATGAAAGGGTATTTTATGAAAGAAATGGAAGAGGAAGCAATGAAGTGTTATGAGGAGACTGTGGGTGATAATTCAGTGGTGAAGATGAGTGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAATTTGGTGAGGCTTTGACATTGTTTGATAGGATGACAAAAGAGCATCGTCCGCCCAGGCATCTGGCAGTGAACTTGGGAAGCTTTAATGTTATGGTTGATGGGTACTGCATCGAAGGGAGGTTCAAAGAGGCCATTGAAGTATTTGAGAAGATGGGTGATTATAGGTGTTGCCCAGATACGTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAGATGCTTTACGGAACAATGGATGATAAGGGAGTAAACCCGGACGAGTTTACTTATGGTTTGTTGATGGATTCTTGCTTTAAAAAAAACAGGGCAGATGATGCAGCTGCATATTTTAGAAAAATGGTAGATTCTGGACTCAGACCCAATATAGCAGTTTATAATATATTAGTGGACGAGTTGGTTAAATTAGGGAAGATCGACGACGCAAAGTCTTTCTTTGATTTGATGGTGAAGAAGCTCAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAAGCGTTGAGTGAATCAGGAAAAATGGACGAAATACTAAATGTGGTCGATACCCTTCTTGATGATGATGGGATTGAATTTTCGGAAGAGCTGCAGGAGTTCGTGAGAGGTGAGTTGAGGAAGGAAAACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAAGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTTTCTTCTTTACTGTCATCCAAGTTGTTTGCGAACAAGGAAGGTGAGAAAGAATCTGTAGTGAATGAAATGCAATCTGTTGAACAAGAAGACGACAGTGGTAAAACTGAACTTGCGGAATCAAGTCCTTGA

Coding sequence (CDS)

ATGGCATTATCGAAGCCGGCCTTCTTCACCCACCTCAAAACCCTAACCGGTTCCCACCATTTACTCCAGCGCCAAGCTCTGGCACCATTTCCTATCGTCACTCTCCGATTTCTCTCTTTTGCATCGGCTGAGGAAGCTGATGCCGAACGACGCCGTCGTAAGCGCCGCCTCCGCATCGAACCCCCGCTCTCTTCTTCCTCTGCCGCTCGTCCACTAACGCAGCCTCCTAGATCTCAAACCCCACAAAACCCTAATGCCCCGAAAATTCCTGAGCACATCTCTGCTCTCTCTGGTAATCGTCTTAACCTCCACAATCGCATTCTCACTCTCATTCGTGAAAATGATCTTGAAGAAGCCGCGCTTTTCACTCGTCATTCAATTTATTCCAATTGTCGTCCCACCATCTTCACCGTCAATGCGGTTCTCAATGCACAGCTTCGTCAATCGAAATATGCCGATTTGCTTTCACTTCACCGGTTTATTACACAGGCTGGTGTCGTCCCTAATATAATCACTCACAATTTGATTTTTCAGACTTATTTGGATTGCCGTAAGCCTGATACGGCAATGGAACATTACAAGCAGTTGATCAATGATGCACCTTTCAACCCCTCGCCGACGACTTATAGGATCTTGATTAAGGGGTTGGTAGACAATAACAAGTTGGAGAGGGCAATGGAGCTTAAAGACGAAATGATTGAGAAAGGTTTTGCTCCTGACCCTCTTATTTATCATTATCTGATGGGGGGATGTGTGAGAAGTTTGGATCCTGATGGAGTTTTTAAGCTTTTTGAAGAGTTGAAAGAAAAGTTGGGAGCGACTGTGGAAGATGGAGTTGTTTATGGGAACTTGATGAAAGGGTATTTTATGAAAGAAATGGAAGAGGAAGCAATGAAGTGTTATGAGGAGACTGTGGGTGATAATTCAGTGGTGAAGATGAGTGCCATTGCATACAATTCTGTGCTTGATGCATTATGCAGGAATGGGAAATTTGGTGAGGCTTTGACATTGTTTGATAGGATGACAAAAGAGCATCGTCCGCCCAGGCATCTGGCAGTGAACTTGGGAAGCTTTAATGTTATGGTTGATGGGTACTGCATCGAAGGGAGGTTCAAAGAGGCCATTGAAGTATTTGAGAAGATGGGTGATTATAGGTGTTGCCCAGATACGTTATCATTCAATAATTTGATCGAACAATTATGTAATAATGGAATGTTGGCTGAAGCTGAGATGCTTTACGGAACAATGGATGATAAGGGAGTAAACCCGGACGAGTTTACTTATGGTTTGTTGATGGATTCTTGCTTTAAAAAAAACAGGGCAGATGATGCAGCTGCATATTTTAGAAAAATGGTAGATTCTGGACTCAGACCCAATATAGCAGTTTATAATATATTAGTGGACGAGTTGGTTAAATTAGGGAAGATCGACGACGCAAAGTCTTTCTTTGATTTGATGGTGAAGAAGCTCAAAATGGATGCCTCGAGCTATCAGTTTATAATGAAAGCGTTGAGTGAATCAGGAAAAATGGACGAAATACTAAATGTGGTCGATACCCTTCTTGATGATGATGGGATTGAATTTTCGGAAGAGCTGCAGGAGTTCGTGAGAGGTGAGTTGAGGAAGGAAAACAGGGAAGAAGATCTAGCTAAACTTGTGGAAGAGAAAGAAAGACTGAAAGCTGAAGCTAAGGCAAAGGAGGCTGAAGCAGCAGAGGCACAGAAGAGAAGTGCTAAAGCTGCTGTTTCTTCTTTACTGTCATCCAAGTTGTTTGCGAACAAGGAAGGTGAGAAAGAATCTGTAGTGAATGAAATGCAATCTGTTGAACAAGAAGACGACAGTGGTAAAACTGAACTTGCGGAATCAAGTCCTTGA

Protein sequence

MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASAEEADAERRRRKRRLRIEPPLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGSFNVMVDGYCIEGRFKEAIEVFEKMGDYRCCPDTLSFNNLIEQLCNNGMLAEAEMLYGTMDDKGVNPDEFTYGLLMDSCFKKNRADDAAAYFRKMVDSGLRPNIAVYNILVDELVKLGKIDDAKSFFDLMVKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGELRKENREEDLAKLVEEKERLKAEAKAKEAEAAEAQKRSAKAAVSSLLSSKLFANKEGEKESVVNEMQSVEQEDDSGKTELAESSP

Homology

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BLAST of CsGy3G019740 vs. NCBI nr
Match: XP_004146221.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis sativus] >KGN57673.1 hypothetical protein Csa_3G239860 [Cucumis sativus])

HSP 1 Score: 822.8 bits (2124), Expect = 8.0e-235
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES
Sbjct: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
           VVNEMQSVEQEDDSGKTELAESSP
Sbjct: 601 VVNEMQSVEQEDDSGKTELAESSP 624

[Close]

BLAST of CsGy3G019740 vs. NCBI nr
Match: XP_008466825.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis melo] >ADN33740.1 pentatricopeptide repeat-containing protein [Cucumis melo subsp. melo])

HSP 1 Score: 696.0 bits (1795), Expect = 1.1e-196
Identity = 564/624 (90.38%), Postives = 573/624 (91.83%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKPAFFTHLKTLTGSHHLLQR                  XXXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XX                    NPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN KLERAMELK+EMI KGFAPD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYGNLMKGYFMKEMEEEAMKC
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVGDN VVKMSAIAYNSVLDALC++GKF EALTLFDRMTKEHRPPRHLAVNLGXXXX
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXDYRC PDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCSPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXXKKLKMDAS+YQFIMKALSESGKMDE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKE+REEDLAKLVEEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LFANKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFANKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
           VVNEMQS +QEDD GKTELAES+P
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESNP 624

[Close]

BLAST of CsGy3G019740 vs. NCBI nr
Match: XP_022922766.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita moschata])

HSP 1 Score: 668.3 bits (1723), Expect = 2.5e-188
Identity = 548/624 (87.82%), Postives = 564/624 (90.38%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKP FFTHLKTLT S HLL  QA AP PIVTLRFLSFAS XXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAP-PIVTLRFLSFASPXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XX              + Q+ QNPNAPK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXXXXXXXXXXXXXXXKPQSTQNPNAPKLPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK+EM  KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTTKGFVPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYG+LMKGYFMKEMEEEAM+C
Sbjct: 241 PLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVG NSVVKMSAIAYNSVLDALC+NGKFGEAL LFDRMTKEH PPR LAV+LG XXX
Sbjct: 301 YEETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXX DY       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXGDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXX KLKMDASSYQFIMKALSESG++DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXXKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKE RE DL KL+EEKE  XXXXXXXXXXXXXXXXXXXXXXXXX    KLF NKEGEKES
Sbjct: 541 RKEEREGDLGKLMEEKERVXXXXXXXXXXXXXXXXXXXXXXXXXLLSSKLFGNKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
            VNEMQS   ++DSGKTELAES+P
Sbjct: 601 AVNEMQS--GQEDSGKTELAESNP 620

[Close]

BLAST of CsGy3G019740 vs. NCBI nr
Match: XP_023553006.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.7 bits (1667), Expect = 7.9e-182
Identity = 540/624 (86.54%), Postives = 555/624 (88.94%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKP FFTHLKTLT S HLL  QA AP PIVTLRFLSFAS XXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPTFFTHLKTLTRSQHLL-HQAPAP-PIVTLRFLSFASPXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XX        P +QP                HISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXXXXXXXXXPQSQPXXXXXXXXXXXXXXXXHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK+EM  KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYG+LMKGYFMKEMEEEAM+C
Sbjct: 241 PLIYHYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVG NSVVKMSAIAYNSVLDALC+NGKFGEAL LFDRMTKEH PPR LAV+LG XXX
Sbjct: 301 YEETVGANSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXX DY       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXGDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXX KLKMDASSYQF+MKALSESG++DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXXKLKMDASSYQFMMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKE RE DL KL+EEKE  XXXXXXXXXXXXXXXXXXXXXXXXX    KLF NKEGEKES
Sbjct: 541 RKEEREGDLGKLMEEKERVXXXXXXXXXXXXXXXXXXXXXXXXXLLSSKLFGNKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
            VNEMQS   ++DSGKTELAES+P
Sbjct: 601 AVNEMQS--GQEDSGKTELAESNP 620

[Close]

BLAST of CsGy3G019740 vs. NCBI nr
Match: XP_022984619.1 (pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita maxima])

HSP 1 Score: 638.3 bits (1645), Expect = 2.8e-179
Identity = 537/624 (86.06%), Postives = 553/624 (88.62%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKP FFTHL+TLT S HLL  QA AP PIVTLRFLSFAS XXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPTFFTHLRTLTRSQHLL-HQAPAP-PIVTLRFLSFASPXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XX       RP +Q                  ISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXXXXXXXXRPQSQXXXXXXXXXXXXXXXXXXISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNA LRQSKY+DLLSLHRFITQAGV PNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNALLRQSKYSDLLSLHRFITQAGVAPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELK+EM  KGF PD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKEEMTMKGFVPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIY YLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYG+LMKGYFMKEMEEEAM+C
Sbjct: 241 PLIYLYLMVGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGSLMKGYFMKEMEEEAMRC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVG NSVVKMSAIAYNSVLDALC+NGKFGEAL LFDRMTKEH PPR LAV+LG XXX
Sbjct: 301 YEETVGVNSVVKMSAIAYNSVLDALCKNGKFGEALMLFDRMTKEHSPPRRLAVDLGSXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXX DY       XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXGDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXX KLKMDASSYQFIMKALSESG++DE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXXKLKMDASSYQFIMKALSESGQLDEMLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKE+RE DL KL+EEKE   XXXXXXXXXXXXXXXXXXXXXXXX    KLF NKEGEKES
Sbjct: 541 RKEDREGDLGKLMEEKERVKXXXXXXXXXXXXXXXXXXXXXXXXLLSSKLFGNKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
            VNEMQS   ++DSGKTELAES+P
Sbjct: 601 AVNEMQS--GQEDSGKTELAESNP 620

[Close]

BLAST of CsGy3G019740 vs. TAIR10
Match: AT3G49240.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 410.2 bits (1053), Expect = 2.2e-114
Identity = 353/560 (63.04%), Postives = 409/560 (73.04%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           M++SK AF  HL+TL+ S+    R  + P P + +R++SFA+     XXXXXXXXXXXXX
Sbjct: 1   MSISKAAFLNHLQTLSRSY----RHRVLPQPFLAVRYMSFAT----QXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTP---QNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLE 120
           XX              +SQ P   QNPN PK+PE +SAL G RL+LHN IL LIRENDLE
Sbjct: 61  XXXXXXXXXXXXXXXXQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLE 120

Query: 121 EAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIF 180
           EAAL+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+ PNIIT+NLIF
Sbjct: 121 EAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIF 180

Query: 181 QTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGF 240
           Q YLD RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+K++M  KGF
Sbjct: 181 QAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGF 240

Query: 241 APDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEA 300
             DP++Y YLM GCV++ D DGV KL++ELKEKLG                         
Sbjct: 241 VVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 MKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGX 360
                  VG+NS V+MSA+AYN VL+AL  NGKF EAL LFD + KEH PPRHLAVNLG 
Sbjct: 301 XXXXXXAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGT 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                    D++C PDTLXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVR 540
           XXXXXXXXXX KLKMD  +Y+FIM+ALSE+G++DE+L +VD +LDDD +  SEELQEFV+
Sbjct: 481 XXXXXXXXXXXKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVK 540

Query: 541 GELRKENREEDLAKLVEEKE 558
            ELRK  RE DL KL+EEKE
Sbjct: 541 EELRKGGREGDLEKLMEEKE 552

[Close]

BLAST of CsGy3G019740 vs. TAIR10
Match: AT1G10270.1 (glutamine-rich protein 23)

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-14
Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 88  KIPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLR 147
           ++P+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ A  R
Sbjct: 133 RLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYR 192

Query: 148 QSKYADLLSLHRF 161
             +Y++ +SL ++
Sbjct: 193 AKRYSESISLFQY 205

[Close]

BLAST of CsGy3G019740 vs. TAIR10
Match: AT3G09650.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-12
Identity = 47/176 (26.70%), Postives = 86/176 (48.86%), Query Frame = 0


Query: 168 PNIITHNLIFQTYLDCRKPDTAMEHYKQLIN-DAPFNPSPTTYRILIKGLVDNNKLERAM 227
           P+ +T+  +   +++    D A +   ++     P N    TY +L+KG     +++RA 
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPAN--RITYNVLLKGYCKQLQIDRAE 509

Query: 228 ELKDEMIE-KGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLM 287
           +L  EM E  G  PD + Y+ ++ GC+   D  G    F E++ +  A  +  + Y  LM
Sbjct: 510 DLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK--ISYTTLM 569

Query: 288 KGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRM 342
           K + M    + A + ++E + D   VK+  IA+N +++  CR G   +A  +  RM
Sbjct: 570 KAFAMSGQPKLANRVFDEMMNDPR-VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRM 620

[Close]

BLAST of CsGy3G019740 vs. TAIR10
Match: AT5G28380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-10
Identity = 56/195 (28.72%), Postives = 91/195 (46.67%), Query Frame = 0


Query: 151 YADLLSL-HRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTY 210
           Y + +SL   F  ++  +PN+++ NLI + + D    D A+E Y+ ++ D    P   TY
Sbjct: 88  YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 147

Query: 211 RILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELK- 270
           RIL K LV   +L+ A ++   M    FA    +Y  L+ G +         ++FEELK 
Sbjct: 148 RILTKALVGAKRLDEACDVVRSMSRCDFA----VYDILIRGFLDKGKFVRASQIFEELKG 207

Query: 271 --EKL-GATVEDGVVYGNL--MKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLD 330
              KL        +   N+  M  +F +  +EEAM+ +           ++ I+ N VL 
Sbjct: 208 PNSKLPWRNYHKAIAIFNVSFMDYWFKQGKDEEAMEIFATL---EHAELLNTISGNGVLK 267

Query: 331 ALCRNGKFGEALTLF 339
            L  +G+  EA  LF
Sbjct: 268 CLVEHGRKTEAWELF 275

[Close]

BLAST of CsGy3G019740 vs. TAIR10
Match: AT5G28340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-10
Identity = 56/195 (28.72%), Postives = 91/195 (46.67%), Query Frame = 0


Query: 151 YADLLSL-HRFITQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFNPSPTTY 210
           Y + +SL   F  ++  +PN+++ NLI + + D    D A+E Y+ ++ D    P   TY
Sbjct: 133 YDEAISLFDYFFNESQTLPNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETY 192

Query: 211 RILIKGLVDNNKLERAMELKDEMIEKGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELK- 270
           RIL K LV   +L+ A ++   M    FA    +Y  L+ G +         ++FEELK 
Sbjct: 193 RILTKALVGAKRLDEACDVVRSMSRCDFA----VYDILIRGFLDKGKFVRASQIFEELKG 252

Query: 271 --EKL-GATVEDGVVYGNL--MKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLD 330
              KL        +   N+  M  +F +  +EEAM+ +           ++ I+ N VL 
Sbjct: 253 PNSKLPWRNYHKAIAIFNVSFMDYWFKQGKDEEAMEIFATL---EHAELLNTISGNGVLK 312

Query: 331 ALCRNGKFGEALTLF 339
            L  +G+  EA  LF
Sbjct: 313 CLVEHGRKTEAWELF 320

[Close]

BLAST of CsGy3G019740 vs. Swiss-Prot
Match: sp|Q9M3A8|PP273_ARATH (Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1796 PE=1 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 4.0e-113
Identity = 353/560 (63.04%), Postives = 409/560 (73.04%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           M++SK AF  HL+TL+ S+    R  + P P + +R++SFA+     XXXXXXXXXXXXX
Sbjct: 1   MSISKAAFLNHLQTLSRSY----RHRVLPQPFLAVRYMSFAT----QXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTP---QNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLE 120
           XX              +SQ P   QNPN PK+PE +SAL G RL+LHN IL LIRENDLE
Sbjct: 61  XXXXXXXXXXXXXXXXQSQIPRPIQNPNIPKLPESVSALVGKRLDLHNHILKLIRENDLE 120

Query: 121 EAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIF 180
           EAAL+TRHS+YSNCRPTIFTVN VL AQLRQ+KY  LL LH FI QAG+ PNIIT+NLIF
Sbjct: 121 EAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIF 180

Query: 181 QTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGF 240
           Q YLD RKP+ A+EHYK  I++AP NPS  T+RIL+KGLV N+ LE+AME+K++M  KGF
Sbjct: 181 QAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGF 240

Query: 241 APDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEA 300
             DP++Y YLM GCV++ D DGV KL++ELKEKLG                         
Sbjct: 241 VVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 MKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGX 360
                  VG+NS V+MSA+AYN VL+AL  NGKF EAL LFD + KEH PPRHLAVNLG 
Sbjct: 301 XXXXXXAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGT 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                    D++C PDTLXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVR 540
           XXXXXXXXXX KLKMD  +Y+FIM+ALSE+G++DE+L +VD +LDDD +  SEELQEFV+
Sbjct: 481 XXXXXXXXXXXKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRVSEELQEFVK 540

Query: 541 GELRKENREEDLAKLVEEKE 558
            ELRK  RE DL KL+EEKE
Sbjct: 541 EELRKGGREGDLEKLMEEKE 552

[Close]

BLAST of CsGy3G019740 vs. Swiss-Prot
Match: sp|Q9SY69|PPR29_ARATH (Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX=3702 GN=GRP23 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 4.8e-13
Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 88  KIPEHISALSGNRLNLHNRILTLIRENDLEEAALFTRHSIYSNCRPTIFTVNAVLNAQLR 147
           ++P+  SAL G RLNLHNR+ +LIR +DL+ A+   R S++SN RPT+FT NA++ A  R
Sbjct: 133 RLPDSTSALVGQRLNLHNRVQSLIRASDLDAASKLARQSVFSNTRPTVFTCNAIIAAMYR 192

Query: 148 QSKYADLLSLHRF 161
             +Y++ +SL ++
Sbjct: 193 AKRYSESISLFQY 205

[Close]

BLAST of CsGy3G019740 vs. Swiss-Prot
Match: sp|Q9SF38|PP222_ARATH (Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF152 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.6e-11
Identity = 47/176 (26.70%), Postives = 86/176 (48.86%), Query Frame = 0


Query: 168 PNIITHNLIFQTYLDCRKPDTAMEHYKQLIN-DAPFNPSPTTYRILIKGLVDNNKLERAM 227
           P+ +T+  +   +++    D A +   ++     P N    TY +L+KG     +++RA 
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPAN--RITYNVLLKGYCKQLQIDRAE 509

Query: 228 ELKDEMIE-KGFAPDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLM 287
           +L  EM E  G  PD + Y+ ++ GC+   D  G    F E++ +  A  +  + Y  LM
Sbjct: 510 DLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTK--ISYTTLM 569

Query: 288 KGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRM 342
           K + M    + A + ++E + D   VK+  IA+N +++  CR G   +A  +  RM
Sbjct: 570 KAFAMSGQPKLANRVFDEMMNDPR-VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRM 620

[Close]

BLAST of CsGy3G019740 vs. Swiss-Prot
Match: sp|Q9LEX5|PP290_ARATH (Pentatricopeptide repeat-containing protein At3g60980, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g60980 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.1e-09
Identity = 64/257 (24.90%), Postives = 118/257 (45.91%), Query Frame = 0


Query: 106 RILTLIR-ENDLEEAALFTRHSIYSNCR--PTIFTVNAVLNAQLRQSKYADLLSLHR-FI 165
           R+  LIR   DL+ AA + R +++++ +   T     +++   LR  +  D   L+  F 
Sbjct: 38  RVSYLIRCVGDLDTAAKYARLAVFTSIKSESTTTICQSIIGGMLRDKRLKDAYDLYEFFF 97

Query: 166 TQAGVVPNIITHNLIFQTYLDCRKPDTAMEHYKQLINDAPFN--PSPTTYRILIKGLVDN 225
            Q  + PN    N I ++       + A+  + + IN    +  PS  ++RIL KGLV +
Sbjct: 98  NQHNLRPNSHCWNYIIESGFQQGLVNDALHFHHRCINSGQVHDYPSDDSFRILTKGLVHS 157

Query: 226 NKLERAME-LKDEMIEKGFAPDPLIYHYL------MGGCVRSLDPDGVFK-----LFEEL 285
            +L++A   L+   + +   PD + Y+ L      +G   ++    G FK        E 
Sbjct: 158 GRLDQAEAFLRGRTVNRTTYPDHVAYNNLIRGFLDLGNFKKANLVLGEFKRLFLIALSET 217

Query: 286 KEKL-GATVEDGVVY--GNLMKGYFMKEMEEEAMKCYEETVGDNSVVKMSAIAYNSVLDA 342
           K+ L  +  E+ V +     M+ +F +  + EAM+CY   V  N ++ + A   N++L  
Sbjct: 218 KDDLHHSNYENRVAFLMATFMEYWFKQGKQVEAMECYNRCVLSNRLL-VCAETGNALLKV 277

[Close]

BLAST of CsGy3G019740 vs. Swiss-Prot
Match: sp|Q8VYD6|PP374_ARATH (Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana OX=3702 GN=CBSPPR1 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.3e-07
Identity = 31/96 (32.29%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 182 DCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPDP 241
           D R+ +  +  Y  L+ D    PS   Y +L+KG V++   + A+ L DEM+     PD 
Sbjct: 167 DLRRANGLLARYDILLLDHG-TPSVLIYNLLMKGYVNSESPQAAINLLDEMLRLRLEPDR 226

Query: 242 LIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVED 278
           L Y+ L+  C++  D D   K F ++KEK     +D
Sbjct: 227 LTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEYYDD 261

[Close]

BLAST of CsGy3G019740 vs. TrEMBL
Match: tr|A0A0A0L7B2|A0A0A0L7B2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239860 PE=4 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 5.3e-235
Identity = 624/624 (100.00%), Postives = 624/624 (100.00%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC
Sbjct: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX
Sbjct: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES
Sbjct: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
           VVNEMQSVEQEDDSGKTELAESSP
Sbjct: 601 VVNEMQSVEQEDDSGKTELAESSP 624

[Close]

BLAST of CsGy3G019740 vs. TrEMBL
Match: tr|A0A1S3CS51|A0A1S3CS51_CUCME (pentatricopeptide repeat-containing protein At3g49240 OS=Cucumis melo OX=3656 GN=LOC103504137 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 7.5e-197
Identity = 564/624 (90.38%), Postives = 573/624 (91.83%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKPAFFTHLKTLTGSHHLLQR                  XXXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XX                    NPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN KLERAMELK+EMI KGFAPD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYGNLMKGYFMKEMEEEAMKC
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVGDN VVKMSAIAYNSVLDALC++GKF EALTLFDRMTKEHRPPRHLAVNLGXXXX
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXDYRC PDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCSPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXXKKLKMDAS+YQFIMKALSESGKMDE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKE+REEDLAKLVEEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LFANKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFANKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
           VVNEMQS +QEDD GKTELAES+P
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESNP 624

[Close]

BLAST of CsGy3G019740 vs. TrEMBL
Match: tr|E5GB98|E5GB98_CUCME (Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 7.5e-197
Identity = 564/624 (90.38%), Postives = 573/624 (91.83%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSKPAFFTHLKTLTGSHHLLQR                  XXXXXXXXXXXXXXXXXX
Sbjct: 1   MALSKPAFFTHLKTLTGSHHLLQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
           XX                    NPN PK+PEHISALSGNRLNLHNRILTLIRENDLEEAA
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXNPNTPKVPEHISALSGNRLNLHNRILTLIRENDLEEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY
Sbjct: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDN KLERAMELK+EMI KGFAPD
Sbjct: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNKKLERAMELKEEMIVKGFAPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PLIYHYLM GCVRS DPDGVFKLFEELKEKLG TVEDGVVYGNLMKGYFMKEMEEEAMKC
Sbjct: 241 PLIYHYLMAGCVRSSDPDGVFKLFEELKEKLGGTVEDGVVYGNLMKGYFMKEMEEEAMKC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEETVGDN VVKMSAIAYNSVLDALC++GKF EALTLFDRMTKEHRPPRHLAVNLGXXXX
Sbjct: 301 YEETVGDNPVVKMSAIAYNSVLDALCKHGKFSEALTLFDRMTKEHRPPRHLAVNLGXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXDYRC PDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXDYRCSPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGEL 540
           XXXXXXXKKLKMDAS+YQFIMKALSESGKMDE+LNVVDTLLDDDGIEFSEELQEFVRGEL
Sbjct: 481 XXXXXXXKKLKMDASNYQFIMKALSESGKMDEVLNVVDTLLDDDGIEFSEELQEFVRGEL 540

Query: 541 RKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKES 600
           RKE+REEDLAKLVEEK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LFANKEGEKES
Sbjct: 541 RKEDREEDLAKLVEEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFANKEGEKES 600

Query: 601 VVNEMQSVEQEDDSGKTELAESSP 625
           VVNEMQS +QEDD GKTELAES+P
Sbjct: 601 VVNEMQSGQQEDDGGKTELAESNP 624

[Close]

BLAST of CsGy3G019740 vs. TrEMBL
Match: tr|I1KAS7|I1KAS7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100778705 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 4.0e-142
Identity = 401/628 (63.85%), Postives = 468/628 (74.52%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSK  F THL+ L+      +R   +    V+LR +SF+S XXXXXXXXXXXXX    
Sbjct: 1   MALSKATFLTHLRALSNPR---RRHPSS----VSLRLISFSSPXXXXXXXXXXXXXLRME 60

Query: 61  XXLSSSSAARPLTQPPRSQTPQNPNAPKIPEHISALSGNRLNLHNRILTLIRENDLEEAA 120
             LS+ +  +   +P  S    NPN PK+PEH+S+L+GNRLNLHNRILTLIRENDL+EAA
Sbjct: 61  PPLSALNRTQTAPKPQSSPYYLNPNNPKLPEHVSSLTGNRLNLHNRILTLIRENDLDEAA 120

Query: 121 LFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIFQTY 180
           L+TRHSIYSNCRPTIFT+NAVL A LRQS+Y+D LSLHRFITQAGVVPNIITHNL+FQTY
Sbjct: 121 LYTRHSIYSNCRPTIFTINAVLAALLRQSRYSDFLSLHRFITQAGVVPNIITHNLVFQTY 180

Query: 181 LDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGFAPD 240
           LDCRKPDTA+EHYKQ +NDAP NPSPTTYR+LIKGL+DNNKLERA+E+K EM  +GF+PD
Sbjct: 181 LDCRKPDTALEHYKQFLNDAPMNPSPTTYRVLIKGLIDNNKLERALEIKTEMDSRGFSPD 240

Query: 241 PLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEAMKC 300
           PL+YHYLM G  R  D DGV +L+EEL+E+LG  VEDGVV+G LMKGYF+K ME+EAM+C
Sbjct: 241 PLVYHYLMLGHTRVSDGDGVLRLYEELRERLGGVVEDGVVFGCLMKGYFLKGMEKEAMEC 300

Query: 301 YEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGXXXX 360
           YEE +G     KMSA+ YNSVLDAL +NG+  EAL LFDRM KE+ PP+ L+VNLG    
Sbjct: 301 YEEVLGKK---KMSAVGYNSVLDALSKNGRLDEALRLFDRMMKEYEPPKRLSVNLGSFNV 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXDYR-CCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                 +YR C PDT XXXXXXXXXXXXXXXXXXXXXX    XX
Sbjct: 361 IVDGYCGEGRFEEAMEVFRKIGEYRGCSPDTXXXXXXXXXXXXXXXXXXXXXXXGEMEXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVRGE 540
           XXXXXXXX KLKMD +SYQF+MK LS+ G++DE+L +VDTLLDD+G++F EE QEFV+GE
Sbjct: 481 XXXXXXXXXKLKMDVASYQFMMKVLSDEGRLDEMLQIVDTLLDDNGVDFDEEFQEFVKGE 540

Query: 541 LRKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGEKE 600
           LRKE REE+L KL+EEKE                               KLF NKE + E
Sbjct: 541 LRKEGREEELTKLIEEKERLKAEAKAKDIEAAEAAKRSARAAVASLLPSKLFGNKETDSE 600

Query: 601 S-VVNEMQSVEQED---DSGKTELAESS 624
           S    E+Q++ +E     + + ELAE +
Sbjct: 601 SKTEGEIQALGEESANATASEAELAEKT 618

[Close]

BLAST of CsGy3G019740 vs. TrEMBL
Match: tr|V7ASG5|V7ASG5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G052600g PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 3.2e-139
Identity = 435/630 (69.05%), Postives = 493/630 (78.25%), Query Frame = 0


Query: 1   MALSKPAFFTHLKTLTGSHHLLQRQALAPFPIVTLRFLSFASXXXXXXXXXXXXXXXXXX 60
           MALSK +F T L+ +         +   PF  V+LR LSF+SXXXXXXXXXXXXXX    
Sbjct: 1   MALSKASFLTQLRAVANP------RRRPPF-CVSLRLLSFSSXXXXXXXXXXXXXXLRME 60

Query: 61  XXLSSSSAARPLTQP-PRSQTPQ--NPNAPKIPEHISALSGNRLNLHNRILTLIRENDLE 120
             LS+ +  R  T P P+ QTP   NPN PK+PEH+SAL+GNRLNLHNRIL L+RENDL+
Sbjct: 61  PPLSALN--RTQTAPKPQQQTPYYLNPNNPKLPEHVSALTGNRLNLHNRILALVRENDLD 120

Query: 121 EAALFTRHSIYSNCRPTIFTVNAVLNAQLRQSKYADLLSLHRFITQAGVVPNIITHNLIF 180
           EAAL+TRHSIYSNCRPTIFT+NAVL A LRQS+YADLLSLHRFITQAGVVPNIITHNLIF
Sbjct: 121 EAALYTRHSIYSNCRPTIFTINAVLAALLRQSRYADLLSLHRFITQAGVVPNIITHNLIF 180

Query: 181 QTYLDCRKPDTAMEHYKQLINDAPFNPSPTTYRILIKGLVDNNKLERAMELKDEMIEKGF 240
           QTYLDCRKPDTA+EHYKQ +NDAP NPSPTTYR+LIKGLVDN+KLERAME+K EM  +GF
Sbjct: 181 QTYLDCRKPDTALEHYKQFLNDAPMNPSPTTYRVLIKGLVDNSKLERAMEIKSEMDSRGF 240

Query: 241 APDPLIYHYLMGGCVRSLDPDGVFKLFEELKEKLGATVEDGVVYGNLMKGYFMKEMEEEA 300
           APDPL+YHYLM G  R  D DGV  L+EEL+E+LG  V+DGVV+G LMKGYF+K ME+EA
Sbjct: 241 APDPLVYHYLMLGHARVSDGDGVLVLYEELRERLGGVVDDGVVFGCLMKGYFIKGMEKEA 300

Query: 301 MKCYEETVGDNSVVKMSAIAYNSVLDALCRNGKFGEALTLFDRMTKEHRPPRHLAVNLGX 360
           + CYEE +G     KMSA+ YNSVLDAL +NG+F EAL LFDRM KEH PP  L+VNLG 
Sbjct: 301 IDCYEEALGK----KMSAVGYNSVLDALSKNGRFDEALRLFDRMMKEHEPPIKLSVNLGS 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXDYRCCPDTLXXXXXXXXXXXXXXXXXXXXXXXXXX 420
                                    +YRC     XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 FNVIVDGYCGERRFKEAIEVFRKMGEYRCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXKKLKMDASSYQFIMKALSESGKMDEILNVVDTLLDDDGIEFSEELQEFVR 540
           XXXXXXXXXX KLKMD +SYQF+MK LS++G++DE+L +VDTLLDD+G++F EE QEFV+
Sbjct: 481 XXXXXXXXXXXKLKMDVASYQFVMKVLSDAGRLDEMLQIVDTLLDDNGVDFDEEFQEFVK 540

Query: 541 GELRKENREEDLAKLVEEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLFANKEGE 600
            ELRKE REE+L KL+EEKE XXXXXXXXXXXXXXXXXXXXXXXXXX    KLF NKE +
Sbjct: 541 VELRKEGREEELTKLMEEKERXXXXXXXXXXXXXXXXXXXXXXXXXXLLPSKLFGNKETD 600

Query: 601 KESV----VNEMQSVEQEDDSGKTELAESS 624
            ES     +  +     +D   + ELAE +
Sbjct: 601 SESKSEGDIQALNKESSDDTVPEAELAEKT 617

The following BLAST results are available for this feature:

BLAST of CsGy3G019740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146221.1	8.0e-235	100.00	PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis sativu...	[more]
XP_008466825.1	1.1e-196	90.38	PREDICTED: pentatricopeptide repeat-containing protein At3g49240 [Cucumis melo] ...	[more]
XP_022922766.1	2.5e-188	87.82	pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita ...	[more]
XP_023553006.1	7.9e-182	86.54	pentatricopeptide repeat-containing protein At3g49240, mitochondrial-like [Cucur...	[more]
XP_022984619.1	2.8e-179	86.06	pentatricopeptide repeat-containing protein At3g49240, mitochondrial [Cucurbita ...	[more]

BLAST of CsGy3G019740 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49240.1	2.2e-114	63.04	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G10270.1	2.6e-14	46.58	glutamine-rich protein 23	[more]
AT3G09650.1	1.4e-12	26.70	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G28380.1	1.0e-10	28.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G28340.1	1.0e-10	28.72	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of CsGy3G019740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M3A8\|PP273_ARATH	4.0e-113	63.04	Pentatricopeptide repeat-containing protein At3g49240, mitochondrial OS=Arabidop...	[more]
sp\|Q9SY69\|PPR29_ARATH	4.8e-13	46.58	Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9SF38\|PP222_ARATH	2.6e-11	26.70	Pentatricopeptide repeat-containing protein At3g09650, chloroplastic OS=Arabidop...	[more]
sp\|Q9LEX5\|PP290_ARATH	7.1e-09	24.90	Pentatricopeptide repeat-containing protein At3g60980, mitochondrial OS=Arabidop...	[more]
sp\|Q8VYD6\|PP374_ARATH	1.3e-07	32.29	Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana OX...	[more]

BLAST of CsGy3G019740 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7B2\|A0A0A0L7B2_CUCSA	5.3e-235	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G239860 PE=4 SV=1	[more]
tr\|A0A1S3CS51\|A0A1S3CS51_CUCME	7.5e-197	90.38	pentatricopeptide repeat-containing protein At3g49240 OS=Cucumis melo OX=3656 GN...	[more]
tr\|E5GB98\|E5GB98_CUCME	7.5e-197	90.38	Pentatricopeptide repeat-containing protein OS=Cucumis melo subsp. melo OX=41267...	[more]
tr\|I1KAS7\|I1KAS7_SOYBN	4.0e-142	63.85	Uncharacterized protein OS=Glycine max OX=3847 GN=100778705 PE=4 SV=1	[more]
tr\|V7ASG5\|V7ASG5_PHAVU	3.2e-139	69.05	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_009G052600g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0009960	endosperm development
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0006349	regulation of gene expression by genetic imprinting
biological_process	GO:0009451	RNA modification
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G019740.1	CsGy3G019740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 542..581
None	No IPR available	COILS	Coil	Coil	coord: 591..611
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..618
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 594..624
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 1..601
None	No IPR available	PANTHER	PTHR24015:SF237	SUBFAMILY NOT NAMED	coord: 1..601
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 178..380
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 324..499
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 276..348 e-value: 1.1E-10 score: 43.6 coord: 437..621 e-value: 1.2E-18 score: 69.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 100..275 e-value: 2.0E-28 score: 101.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 349..419 e-value: 1.8E-16 score: 62.2
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 353..381 e-value: 8.4E-8 score: 31.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 130..180 e-value: 0.0099 score: 15.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 207..252 e-value: 1.5E-7 score: 31.3 coord: 388..436 e-value: 1.1E-11 score: 44.6
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 279..303 e-value: 0.23 score: 11.7 coord: 462..489 e-value: 5.7E-4 score: 19.9 coord: 317..344 e-value: 1.6E-7 score: 31.0
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 357..390 e-value: 6.2E-9 score: 33.5 coord: 392..425 e-value: 1.6E-5 score: 22.7 coord: 426..460 e-value: 7.3E-7 score: 27.0 coord: 208..240 e-value: 2.3E-7 score: 28.6 coord: 462..489 e-value: 3.8E-5 score: 21.6 coord: 317..344 e-value: 7.1E-8 score: 30.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 493..528 score: 7.563
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 389..423 score: 11.224
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 354..388 score: 12.09
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 277..311 score: 6.982
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 459..489 score: 9.504
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 314..348 score: 12.288
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 134..168 score: 7.355
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 240..270 score: 7.805
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 205..239 score: 11.762
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 169..199 score: 6.61
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 424..458 score: 11.827

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G019740	Cla004254	Watermelon (97103) v1	cgybwmB229
CsGy3G019740	Csa3G239860	Cucumber (Chinese Long) v2	cgybcuB109
CsGy3G019740	MELO3C008493	Melon (DHL92) v3.5.1	cgybmeB210
CsGy3G019740	CSPI03G19850	Wild cucumber (PI 183967)	cgybcpiB110
CsGy3G019740	CmaCh16G000480	Cucurbita maxima (Rimu)	cgybcmaB333
CsGy3G019740	CmoCh18G013630	Cucurbita moschata (Rifu)	cgybcmoB326
CsGy3G019740	Lsi05G001010	Bottle gourd (USVL1VR-Ls)	cgyblsiB198
CsGy3G019740	Cp4.1LG09g00010	Cucurbita pepo (Zucchini)	cgybcpeB285
CsGy3G019740	Cp4.1LG14g06710	Cucurbita pepo (Zucchini)	cgybcpeB318
CsGy3G019740	MELO3C008493.2	Melon (DHL92) v3.6.1	cgybmedB215
CsGy3G019740	CsaV3_3G019910	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G019740	Cla97C05G091210	Watermelon (97103) v2	cgybwmbB206
CsGy3G019740	Bhi01G001115	Wax gourd	cgybwgoB271
CsGy3G019740	Carg20323	Silver-seed gourd	carcgybB0545
CsGy3G019740	Carg15064	Silver-seed gourd	carcgybB0974

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy3G019740	Cucumber (Chinese Long) v3	cgybcucB133
CsGy3G019740	Watermelon (97103) v2	cgybwmbB169
CsGy3G019740	Wax gourd	cgybwgoB251
CsGy3G019740	Cucumber (Gy14) v2	cgybcgybB088
CsGy3G019740	Cucurbita maxima (Rimu)	cgybcmaB357
CsGy3G019740	Cucurbita moschata (Rifu)	cgybcmoB304
CsGy3G019740	Cucurbita moschata (Rifu)	cgybcmoB328
CsGy3G019740	Cucurbita pepo (Zucchini)	cgybcpeB430
CsGy3G019740	Bottle gourd (USVL1VR-Ls)	cgyblsiB139
CsGy3G019740	Melon (DHL92) v3.6.1	cgybmedB142
CsGy3G019740	Watermelon (Charleston Gray)	cgybwcgB214
CsGy3G019740	Silver-seed gourd	carcgybB0543