Csa3G118740 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G118740
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-responsive family protein; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr3 : 6585076 .. 6585906 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGGGAAGGCATAGACAAAGAGGGAGGGGGAGACCCACTTCCACTTTCTATGGTTTTTAATTCACTCCCAAATTCCTATATAACCAAACCCTAATTGGAACCCTTTCTCTCTCAACAAATCTAATTCTAATTAAAACCAAACACAGTCTCATGGCCATTCCCAATTACTCCCCCAATCCCACCTCGTTTTACGCTCTCACACTTCCTCCCTTCACTCCATCAGATCCCTGGCCTTTTCCCCATCTCTGAATTCAACTTCAAATTCCCCTCCAAATCCCTCTCTCTCCTTTTAATTCTCATATATCCTTTCAAATCACACGTACATATATACTTTATATATTTTATCGAGTCGTCGTAGAAATGGGCGGCGGAGAGAGACGACGGCAGTCCAGCGCCACCGTGCCGAAAGGGTGTTTGGCGGTGAAAGTGGGGCAGAAAGGGGAAGAGCAACAGAGATTTGTGGTGCCGGTGATGTATTTCAATCACCCGCGGTTCATGCAATTACTGAAGGAGGCAGAGGAAGAATACGGATTTGATCAGAAGGGGACCATCGCTATTCCTTGCCATGTGGAAGAGTTTCGGCACGTGCAAGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCATAACCACCACCACCACCAACAACAACACCACCACCACCACCTCGGTTGCTTTCGGGTTTCCTTCTAATCATCAACCTACACGATTAATAATAAAATTATGTATATTTCTCTCTTTATTTTAGGTCTTTTTTGGGAATATATTGCACTCTGTAATCCTAACAAAACTTCAATCTCTCTCTCTCTCTCTATATATATATATAT

mRNA sequence

ATGGGCGGCGGAGAGAGACGACGGCAGTCCAGCGCCACCGTGCCGAAAGGGTGTTTGGCGGTGAAAGTGGGGCAGAAAGGGGAAGAGCAACAGAGATTTGTGGTGCCGGTGATGTATTTCAATCACCCGCGGTTCATGCAATTACTGAAGGAGGCAGAGGAAGAATACGGATTTGATCAGAAGGGGACCATCGCTATTCCTTGCCATGTGGAAGAGTTTCGGCACGTGCAAGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCATAACCACCACCACCACCAACAACAACACCACCACCACCACCTCGGTTGCTTTCGGGTTTCCTTCTAA

Coding sequence (CDS)

ATGGGCGGCGGAGAGAGACGACGGCAGTCCAGCGCCACCGTGCCGAAAGGGTGTTTGGCGGTGAAAGTGGGGCAGAAAGGGGAAGAGCAACAGAGATTTGTGGTGCCGGTGATGTATTTCAATCACCCGCGGTTCATGCAATTACTGAAGGAGGCAGAGGAAGAATACGGATTTGATCAGAAGGGGACCATCGCTATTCCTTGCCATGTGGAAGAGTTTCGGCACGTGCAAGGCATGATTGACCGTGAAAATTCATTCCACCGCCGTCATAACCACCACCACCACCAACAACAACACCACCACCACCACCTCGGTTGCTTTCGGGTTTCCTTCTAA

Protein sequence

MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF*

Homology

[Close]

BLAST of Csa3G118740 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 2.4e-37
Identity = 76/120 (63.33%), Postives = 88/120 (73.33%), Query Frame = 1


Query: 1   MGGGER--------RRQSSAT--VPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLK 60
           MG GE+        R+QS     VPKGCLA+KVG +GEEQQRF+VPV+YFNHP FMQLLK
Sbjct: 1   MGTGEKTLKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLK 60

Query: 61  EAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQ--QQHHHHHLGCFR 109
           EAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E S +  +NHHH    +  +HH +GCFR
Sbjct: 61  EAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVGCFR 120

[Close]

BLAST of Csa3G118740 vs. Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.5e-13
Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = 1


Query: 14  VPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEF 73
           VP+G LA+ VGQK  +  R +VP++YFNHP F +LL+EAE+EYGF  +G I IPC   +F
Sbjct: 79  VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDF 138

Query: 74  RHVQGMI 81
             V+  I
Sbjct: 139 ERVKTRI 145

[Close]

BLAST of Csa3G118740 vs. Swiss-Prot
Match: SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 7.9e-12
Identity = 36/75 (48.00%), Postives = 49/75 (65.33%), Query Frame = 1


Query: 7  RRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KGTIA 66
          RR+SS+T P+G +AV VG+  ++++R+VVPV Y N P F QLL ++EEE+G+D   G + 
Sbjct: 15 RRESSST-PRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLT 74

Query: 67 IPCHVEEFRHVQGMI 81
          IPCH   F  V   I
Sbjct: 75 IPCHESLFFTVTSQI 88

[Close]

BLAST of Csa3G118740 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10
Identity = 34/74 (45.95%), Postives = 44/74 (59.46%), Query Frame = 1


Query: 4  GERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KG 63
          G R+  ++   PKG LAV VG+K    +RFV+PV Y N P F  LL +AEEE+G+D   G
Sbjct: 7  GIRKASNAVDAPKGYLAVYVGEK---MKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMG 66

Query: 64 TIAIPCHVEEFRHV 77
           + IPC  E F+ +
Sbjct: 67 GLTIPCSEEVFQRI 77

[Close]

BLAST of Csa3G118740 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-10
Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 1


Query: 4  GERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ-KG 63
          G R+   +A  PKG LAV VG+K    +RFV+PV Y N P F  LL +AEEE+G+D   G
Sbjct: 7  GIRKASKAADAPKGYLAVYVGEK---LKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMG 66

Query: 64 TIAIPCHVEEFRHVQGMID 82
           + IPC  + F+ +   ++
Sbjct: 67 GLTIPCSEDVFQCITSCLN 82

[Close]

BLAST of Csa3G118740 vs. TrEMBL
Match: A0A0A0L5S7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118740 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-61
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1


Query: 1   MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 60
           MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ
Sbjct: 1   MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 60

Query: 61  KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF 112
           KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF
Sbjct: 61  KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF 111

[Close]

BLAST of Csa3G118740 vs. TrEMBL
Match: M5X0E8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010986mg PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-37
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 1


Query: 7   RRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAI 66
           ++Q    VPKGCLA+KVGQ GEEQQRFVVPV+YFNHP F+QLLKEAEEEYGFDQKGTI I
Sbjct: 133 KKQGIRDVPKGCLAIKVGQ-GEEQQRFVVPVIYFNHPLFIQLLKEAEEEYGFDQKGTITI 192

Query: 67  PCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           PCHVEEFR+VQGMIDRE S H  H HHH    HHHH +GCFRV
Sbjct: 193 PCHVEEFRYVQGMIDREKSLH--HPHHH----HHHHVVGCFRV 228

[Close]

BLAST of Csa3G118740 vs. TrEMBL
Match: E5GCM6_CUCME (Auxin-responsive family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.4e-36
Identity = 75/109 (68.81%), Postives = 88/109 (80.73%), Query Frame = 1


Query: 1   MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 60
           MG GER ++S   VPKGCLA+KVG + EE+QRFVVPV+YFNHP F+QLLKEAE+EYGFDQ
Sbjct: 1   MGSGERSQESFKDVPKGCLAIKVGHESEEKQRFVVPVLYFNHPLFIQLLKEAEDEYGFDQ 60

Query: 61  KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           KGTI IPCHVE+FR+VQ +IDRE SF     HHHH   HHH ++ CFRV
Sbjct: 61  KGTITIPCHVEQFRYVQALIDRETSF-----HHHH---HHHLYVPCFRV 101

[Close]

BLAST of Csa3G118740 vs. TrEMBL
Match: M5XL68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013301mg PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.9e-36
Identity = 76/96 (79.17%), Postives = 81/96 (84.38%), Query Frame = 1


Query: 14  VPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEF 73
           +PKGCLAV VGQ GEEQQRFV+PV+Y NHP FMQLLKEAEEEYGFDQKG I IPCHVEEF
Sbjct: 37  IPKGCLAVMVGQ-GEEQQRFVIPVIYINHPLFMQLLKEAEEEYGFDQKGPITIPCHVEEF 96

Query: 74  RHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           R VQGMIDRE S H RH HH+ QQ H HHH+ CFRV
Sbjct: 97  RTVQGMIDRETSVHCRH-HHNQQQHHQHHHVLCFRV 130

[Close]

BLAST of Csa3G118740 vs. TrEMBL
Match: A0A0D2SYI3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G128100 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 1.9e-36
Identity = 74/102 (72.55%), Postives = 84/102 (82.35%), Query Frame = 1


Query: 8   RQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIP 67
           ++ +  VPKGCLA+KVG K EEQQRFVVPV+YFNHP FMQLLKEAEEEYGF+QKG I IP
Sbjct: 28  KKQAKGVPKGCLAIKVGPKEEEQQRFVVPVLYFNHPLFMQLLKEAEEEYGFEQKGMITIP 87

Query: 68  CHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           CHVEEFR+V+G+ID E S H    HHHH   HHHHH+GCFRV
Sbjct: 88  CHVEEFRNVRGLIDGEKSLH----HHHH---HHHHHVGCFRV 122

[Close]

BLAST of Csa3G118740 vs. TAIR10
Match: AT2G46690.1 (AT2G46690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 156.0 bits (393), Expect = 1.4e-38
Identity = 76/120 (63.33%), Postives = 88/120 (73.33%), Query Frame = 1


Query: 1   MGGGER--------RRQSSAT--VPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLK 60
           MG GE+        R+QS     VPKGCLA+KVG +GEEQQRF+VPV+YFNHP FMQLLK
Sbjct: 1   MGTGEKTLKSFQLHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLK 60

Query: 61  EAEEEYGFDQKGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQ--QQHHHHHLGCFR 109
           EAE+EYGFDQKGTI IPCHVEEFR+VQ +ID E S +  +NHHH    +  +HH +GCFR
Sbjct: 61  EAEDEYGFDQKGTITIPCHVEEFRYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVGCFR 120

[Close]

BLAST of Csa3G118740 vs. TAIR10
Match: AT4G00880.1 (AT4G00880.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 146.4 bits (368), Expect = 1.1e-35
Identity = 73/99 (73.74%), Postives = 79/99 (79.80%), Query Frame = 1


Query: 14  VPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEF 73
           VPKGCLAVKVGQ GEEQ+RFV+PVMYFNHP F QLLKEAEEE+GF QKGTI IPCHVEEF
Sbjct: 28  VPKGCLAVKVGQ-GEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEF 87

Query: 74  RHVQGMIDRENSFHRRHN---HHHHQQQHHHHHLGCFRV 110
           R+VQG+IDREN+     N   HHHH   HH+H + CFRV
Sbjct: 88  RYVQGLIDRENTRFLGTNLLDHHHH---HHNHLIRCFRV 122

[Close]

BLAST of Csa3G118740 vs. TAIR10
Match: AT3G61900.1 (AT3G61900.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 125.6 bits (314), Expect = 2.0e-29
Identity = 58/72 (80.56%), Postives = 62/72 (86.11%), Query Frame = 1


Query: 14  VPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVEEF 73
           VPKGCLA+KVG K EE+QRFVVPV YFNHP FMQLL+EAEEEYGF+QKGTI IPCHVE F
Sbjct: 30  VPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVF 89

Query: 74  RHVQGMIDRENS 86
           R+VQ MI+RE S
Sbjct: 90  RYVQDMINRERS 101

[Close]

BLAST of Csa3G118740 vs. TAIR10
Match: AT5G53590.1 (AT5G53590.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 1.0e-25
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 1


Query: 14  VPKGCLAVKVGQKGEEQ--QRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAIPCHVE 73
           VPKGC+A+ VG + +E+   RFVVP+++ +HP F+ LLKEAE+EYGF   G I IPC V+
Sbjct: 46  VPKGCVAIMVGHEDDEEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVD 105

Query: 74  EFRHVQGMIDRENSFHRRHN---HHHHQQQHHHHHLGCF 108
           EF+HVQ +ID E   HRRH+   H H+   HH++HL CF
Sbjct: 106 EFKHVQEVIDEET--HRRHSHGGHGHNNHNHHNNHLRCF 142

[Close]

BLAST of Csa3G118740 vs. TAIR10
Match: AT3G60690.1 (AT3G60690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 85.1 bits (209), Expect = 3.0e-17
Identity = 41/84 (48.81%), Postives = 54/84 (64.29%), Query Frame = 1


Query: 3   GGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKG 62
           G E  R+    VPKG  AV +G+K  + QR +VP++YFNHP F +LL+EAEEE+GF Q+G
Sbjct: 77  GQEPIREKPDPVPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEG 136

Query: 63  TIAIPCHVEEFRHVQGMIDRENSF 87
            I IPC   +F+ VQ  I+  + F
Sbjct: 137 GITIPCPYSDFKRVQTRIESGSGF 160

[Close]

BLAST of Csa3G118740 vs. NCBI nr
Match: gi|449432006|ref|XP_004133791.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 1.8e-61
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 1


Query: 1   MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 60
           MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ
Sbjct: 1   MGGGERRRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQ 60

Query: 61  KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF 112
           KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF
Sbjct: 61  KGTIAIPCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRVSF 111

[Close]

BLAST of Csa3G118740 vs. NCBI nr
Match: gi|694381053|ref|XP_009366624.1| (PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Pyrus x bretschneideri])

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-38
Identity = 80/103 (77.67%), Postives = 88/103 (85.44%), Query Frame = 1


Query: 7   RRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAI 66
           ++Q    VPKGCLA+KVGQ GEEQQRFVVPV+YFNHP F++LLKEAEEEYGFDQKGTI I
Sbjct: 27  KKQVIRDVPKGCLAIKVGQ-GEEQQRFVVPVIYFNHPLFIRLLKEAEEEYGFDQKGTITI 86

Query: 67  PCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           PCHVEEFR VQGMIDRE S    H+HHHHQQ  HHHH+GCFRV
Sbjct: 87  PCHVEEFRSVQGMIDREKSL---HHHHHHQQ--HHHHVGCFRV 123

[Close]

BLAST of Csa3G118740 vs. NCBI nr
Match: gi|658016243|ref|XP_008343461.1| (PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Malus domestica])

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-37
Identity = 79/103 (76.70%), Postives = 87/103 (84.47%), Query Frame = 1


Query: 7   RRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAI 66
           ++Q    VPKGCLA+KVGQ GEEQQRFVVPV+YFNHP F+QLLKEAEEEYGFDQKGTI I
Sbjct: 28  KKQVIRDVPKGCLAIKVGQ-GEEQQRFVVPVIYFNHPLFIQLLKEAEEEYGFDQKGTITI 87

Query: 67  PCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           PCHVEEFR VQGMIDRE S    H+HHHH   HHH+H+GCFRV
Sbjct: 88  PCHVEEFRSVQGMIDREKSL---HHHHHH---HHHYHVGCFRV 123

[Close]

BLAST of Csa3G118740 vs. NCBI nr
Match: gi|645254527|ref|XP_008233080.1| (PREDICTED: auxin-induced protein 15A [Prunus mume])

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-37
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 1


Query: 7   RRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAI 66
           ++Q    VPKGCLA+KVGQ GEEQQRFVVPV+YFNHP F+QLLKEAEEEYGFDQKGTI I
Sbjct: 29  KKQGIRDVPKGCLAIKVGQ-GEEQQRFVVPVIYFNHPLFIQLLKEAEEEYGFDQKGTITI 88

Query: 67  PCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           PCHVEEFR+VQGMIDRE S H  H HHH    HHHH +GCFRV
Sbjct: 89  PCHVEEFRYVQGMIDREKSLH--HPHHH----HHHHVVGCFRV 124

[Close]

BLAST of Csa3G118740 vs. NCBI nr
Match: gi|596005129|ref|XP_007218348.1| (hypothetical protein PRUPE_ppa010986mg [Prunus persica])

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-37
Identity = 79/103 (76.70%), Postives = 86/103 (83.50%), Query Frame = 1


Query: 7   RRQSSATVPKGCLAVKVGQKGEEQQRFVVPVMYFNHPRFMQLLKEAEEEYGFDQKGTIAI 66
           ++Q    VPKGCLA+KVGQ GEEQQRFVVPV+YFNHP F+QLLKEAEEEYGFDQKGTI I
Sbjct: 133 KKQGIRDVPKGCLAIKVGQ-GEEQQRFVVPVIYFNHPLFIQLLKEAEEEYGFDQKGTITI 192

Query: 67  PCHVEEFRHVQGMIDRENSFHRRHNHHHHQQQHHHHHLGCFRV 110
           PCHVEEFR+VQGMIDRE S H  H HHH    HHHH +GCFRV
Sbjct: 193 PCHVEEFRYVQGMIDREKSLH--HPHHH----HHHHVVGCFRV 228

The following BLAST results are available for this feature:

BLAST of Csa3G118740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU32_ARATH	2.4e-37	63.33	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1	[more]
SAU36_ARATH	5.5e-13	52.24	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1	[more]
SAU15_ARATH	7.9e-12	48.00	Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1	[more]
AXX15_SOYBN	1.5e-10	45.95	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]
AX15A_SOYBN	3.3e-10	43.04	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]

BLAST of Csa3G118740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5S7_CUCSA	1.3e-61	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G118740 PE=4 SV=1	[more]
M5X0E8_PRUPE	1.7e-37	76.70	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010986mg PE=4 SV=1	[more]
E5GCM6_CUCME	1.4e-36	68.81	Auxin-responsive family protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
M5XL68_PRUPE	1.9e-36	79.17	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013301mg PE=4 SV=1	[more]
A0A0D2SYI3_GOSRA	1.9e-36	72.55	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G128100 PE=4 SV=1	[more]

BLAST of Csa3G118740 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46690.1	1.4e-38	63.33	SAUR-like auxin-responsive protein family	[more]
AT4G00880.1	1.1e-35	73.74	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	2.0e-29	80.56	SAUR-like auxin-responsive protein family	[more]
AT5G53590.1	1.0e-25	53.54	SAUR-like auxin-responsive protein family	[more]
AT3G60690.1	3.0e-17	48.81	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa3G118740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432006\|ref\|XP_004133791.1\|	1.8e-61	100.00	PREDICTED: auxin-induced protein X15-like [Cucumis sativus]	[more]
gi\|694381053\|ref\|XP_009366624.1\|	2.9e-38	77.67	PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Pyrus x bretschneider...	[more]
gi\|658016243\|ref\|XP_008343461.1\|	1.1e-37	76.70	PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Malus domestica]	[more]
gi\|645254527\|ref\|XP_008233080.1\|	2.4e-37	76.70	PREDICTED: auxin-induced protein 15A [Prunus mume]	[more]
gi\|596005129\|ref\|XP_007218348.1\|	2.4e-37	76.70	hypothetical protein PRUPE_ppa010986mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
biological_process	GO:1900140	regulation of seedling development
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU096264	cucumber EST collection version 3.0	transcribed_cluster
CU104105	cucumber EST collection version 3.0	transcribed_cluster
CU116281	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G118740.1	Csa3G118740.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU096264	CU096264	transcribed_cluster
CU104105	CU104105	transcribed_cluster
CU116281	CU116281	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 9..78 score: 1.2
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 14..108 score: 2.1
None	No IPR available	PANTHER	PTHR31374:SF29	SUBFAMILY NOT NAMED	coord: 14..108 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G118740	Cla004867	Watermelon (97103) v1	cuwmB258
Csa3G118740	Cla021120	Watermelon (97103) v1	cuwmB233
Csa3G118740	MELO3C005913	Melon (DHL92) v3.5.1	cumeB175
Csa3G118740	MELO3C005991	Melon (DHL92) v3.5.1	cumeB236
Csa3G118740	Lsi05G021640	Bottle gourd (USVL1VR-Ls)	culsiB209
Csa3G118740	MELO3C005991.2	Melon (DHL92) v3.6.1	cumedB223
Csa3G118740	MELO3C005913.2	Melon (DHL92) v3.6.1	cumedB157
Csa3G118740	Cla97C05G080550	Watermelon (97103) v2	cuwmbB204
Csa3G118740	Bhi01G000397	Wax gourd	cuwgoB284
Csa3G118740	Bhi12G000595	Wax gourd	cuwgoB261
Csa3G118740	CSPI03G07590	Wild cucumber (PI 183967)	cpicuB120
Csa3G118740	CSPI05G02860	Wild cucumber (PI 183967)	cpicuB221
Csa3G118740	Cucsa.202430	Cucumber (Gy14) v1	cgycuB307
Csa3G118740	Cucsa.259570	Cucumber (Gy14) v1	cgycuB366
Csa3G118740	CmaCh15G010040	Cucurbita maxima (Rimu)	cmacuB285
Csa3G118740	CmoCh06G010150	Cucurbita moschata (Rifu)	cmocuB806
Csa3G118740	CmoCh02G011750	Cucurbita moschata (Rifu)	cmocuB593
Csa3G118740	CmoCh14G021980	Cucurbita moschata (Rifu)	cmocuB239
Csa3G118740	Cp4.1LG08g00650	Cucurbita pepo (Zucchini)	cpecuB862
Csa3G118740	Cp4.1LG03g15990	Cucurbita pepo (Zucchini)	cpecuB609
Csa3G118740	CsGy3G007730	Cucumber (Gy14) v2	cgybcuB109
Csa3G118740	Carg25718	Silver-seed gourd	carcuB0132

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa3G118740	Csa5G139100	Cucumber (Chinese Long) v2	cucuB095

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G118740	Cucurbita maxima (Rimu)	cmacuB253
Csa3G118740	Cucurbita maxima (Rimu)	cmacuB818
Csa3G118740	Cucurbita maxima (Rimu)	cmacuB830
Csa3G118740	Watermelon (Charleston Gray)	cuwcgB222
Csa3G118740	Silver-seed gourd	carcuB1007