Csa5G139100 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa5G139100
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-induced protein-like; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr5 : 3399981 .. 3400856 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGAGGCTGAGGCTGACCCTTTTTCACACGGACTTGGAATTAAAATTCAATTGCCTTAAGTTTCCTTTTCGGGATATAAATACCACGCTCCGGCTCTCCCAAATTCTCAGTTCCTCTTGCTTTGTAATATCGATCGTATATGTTGAAGAAGAAGCGTCAATGACCAATATCCCTCCCTCCTTCACTCATTCCTCTTTCACTCTCTTCACCCTCGCTATCTCCTCTTACCATCCTTGGCCCTTTTCTCTTTAACACTTTCACCTTTTTCCGATGGGTTTCGGTGGCGACAAGCATCATCATCAGCACCTCCTGCATCTCAATTTCCATTTCCACGTTCATTTCCCTCATTTTTACCACCATCGGAACAAGGTGGAGACTCCCAAGGGATGTTTGGCCATTCTTGTTGGCCAAGAGCAACAGCGGTTCTTCATTCCTGTCATTTATGTCAACCATCCTTTATTTGTTCAGCTCTTGAAGAAGGCCGAGGACGAGTATGGCTTCGATCAGAAAGGACCTATCTCTATTCCTTGCCCTGTCGACGACTTTCGCACCCTTCAGGGCATCATTTACCATGATCACCATCACCACCATCTTCCTGTCTCCTGTTTCAGGGATTCATCTCATTCCCATTGCTGATATTGATGAAAAAACTACGTTAGATTTTAGTTTTAGCTTTTCTTTCTTTCTTTATTTGTTTTCTGATACACAGAACCCATTACCAATTTGATTTCTGGATTTGGATTTTCTCCTGTTAATATATTTTCACGGTCAAGTCAATATTGAATCATATATGATATATGAGCCTTTTTCAGCCTTGTTCTTTCTTACAACTAAAATGATGTAATCAAAACAGTCTGGAATGAATATTTGTTTGTT

mRNA sequence

ATGGGTTTCGGTGGCGACAAGCATCATCATCAGCACCTCCTGCATCTCAATTTCCATTTCCACGTTCATTTCCCTCATTTTTACCACCATCGGAACAAGGTGGAGACTCCCAAGGGATGTTTGGCCATTCTTGTTGGCCAAGAGCAACAGCGGTTCTTCATTCCTGTCATTTATGTCAACCATCCTTTATTTGTTCAGCTCTTGAAGAAGGCCGAGGACGAGTATGGCTTCGATCAGAAAGGACCTATCTCTATTCCTTGCCCTGTCGACGACTTTCGCACCCTTCAGGGCATCATTTACCATGATCACCATCACCACCATCTTCCTGTCTCCTGTTTCAGGGATTCATCTCATTCCCATTGCTGA

Coding sequence (CDS)

ATGGGTTTCGGTGGCGACAAGCATCATCATCAGCACCTCCTGCATCTCAATTTCCATTTCCACGTTCATTTCCCTCATTTTTACCACCATCGGAACAAGGTGGAGACTCCCAAGGGATGTTTGGCCATTCTTGTTGGCCAAGAGCAACAGCGGTTCTTCATTCCTGTCATTTATGTCAACCATCCTTTATTTGTTCAGCTCTTGAAGAAGGCCGAGGACGAGTATGGCTTCGATCAGAAAGGACCTATCTCTATTCCTTGCCCTGTCGACGACTTTCGCACCCTTCAGGGCATCATTTACCATGATCACCATCACCACCATCTTCCTGTCTCCTGTTTCAGGGATTCATCTCATTCCCATTGCTGA

Protein sequence

MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSHC*

Homology

[Close]

BLAST of Csa5G139100 vs. Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.8e-22
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 1


Query: 35  ETPKGCLAILVG---QEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDD 94
           + PKGCLAI VG   +EQQRF +PV+Y NHPLF+QLLK+AEDEYGFDQKG I+IPC V++
Sbjct: 23  DVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEE 82

Query: 95  FRTLQGII--------YHDHHH--------HHLPVSCFR 115
           FR +Q +I         ++HHH        HHL V CFR
Sbjct: 83  FRYVQALIDGERSVYNGNNHHHRHGGRDQYHHL-VGCFR 120

[Close]

BLAST of Csa5G139100 vs. Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11
Identity = 32/70 (45.71%), Postives = 43/70 (61.43%), Query Frame = 1


Query: 30  HRNKVETPKGCLAILVGQEQ---QRFFIPVIYVNHPLFVQLLKKAEDEYGFDQKGPISIP 89
           H+     P+G LAI VGQ+     R  +P++Y NHPLF +LL++AE EYGF  +G I+IP
Sbjct: 73  HKKADPVPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIP 132

Query: 90  CPVDDFRTLQ 97
           C   DF  ++
Sbjct: 133 CLYSDFERVK 142

[Close]

BLAST of Csa5G139100 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 1


Query: 34 VETPKGCLAILVGQEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQ-KGPISIPCPVDDF 93
          VE PKG L + VG + +RF IPV Y+N P F  LL +AE+E+G+D   G ++IPC  D+F
Sbjct: 23 VEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEF 82

Query: 94 RTL 96
           T+
Sbjct: 83 LTV 85

[Close]

BLAST of Csa5G139100 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-10
Identity = 30/65 (46.15%), Postives = 43/65 (66.15%), Query Frame = 1


Query: 32 NKVETPKGCLAILVGQEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQ-KGPISIPCPVD 91
          N V+ PKG LA+ VG++ +RF IPV Y+N P F  LL +AE+E+G+D   G ++IPC  +
Sbjct: 13 NAVDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEE 72

Query: 92 DFRTL 96
           F+ +
Sbjct: 73 VFQRI 77

[Close]

BLAST of Csa5G139100 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.3e-09
Identity = 29/61 (47.54%), Postives = 41/61 (67.21%), Query Frame = 1


Query: 34 VETPKGCLAILVGQEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQ-KGPISIPCPVDDF 93
          ++ PKG LA+ VG+  +RF IPV ++N PLF  LL +AE+E+G+D   G ++IPC  D F
Sbjct: 23 LDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

[Close]

BLAST of Csa5G139100 vs. TrEMBL
Match: A0A0A0KJC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139100 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 4.4e-71
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVN 60
           MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVN
Sbjct: 1   MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVN 60

Query: 61  HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSH 120
           HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSH
Sbjct: 61  HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSH 120

Query: 121 C 122
           C
Sbjct: 121 C 121

[Close]

BLAST of Csa5G139100 vs. TrEMBL
Match: A0A067DMQ5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035928mg PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-33
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   GDKHHHQHLLHLNFHFHVHFPHFYHHRNKVET---PKGCLAILVGQE---QQRFFIPVIY 64
           G  +HH    HLNFH H+   HF+HH  K E    PKGCLAILVGQE   QQ+F IPVIY
Sbjct: 2   GTGYHH----HLNFHLHLPHIHFHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIY 61

Query: 65  VNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHD----HHHHHLPVSCFR 115
           +NHPLF+QLLK+AE+EYGFDQKGPI++PC V++FRT+QG+I  D    HHHHH  V CFR
Sbjct: 62  INHPLFMQLLKEAEEEYGFDQKGPITLPCHVEEFRTVQGMIDKDRSLLHHHHHHHVWCFR 117

[Close]

BLAST of Csa5G139100 vs. TrEMBL
Match: V4TRT5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022912mg PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-33
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   GDKHHHQHLLHLNFHFHVHFPHFYHHRNKVET---PKGCLAILVGQE---QQRFFIPVIY 64
           G  +HH    HLNFH H+   HF+HH  K E    PKGCLAILVGQE   QQ+F IPVIY
Sbjct: 2   GTGYHH----HLNFHLHLPHIHFHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIY 61

Query: 65  VNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHD----HHHHHLPVSCFR 115
           +NHPLF+QLLK+AE+EYGFDQKGPI++PC V++FRT+QG+I  D    HHHHH  V CFR
Sbjct: 62  INHPLFMQLLKEAEEEYGFDQKGPITLPCHVEEFRTVQGMIDKDRSLLHHHHHHHVWCFR 117

[Close]

BLAST of Csa5G139100 vs. TrEMBL
Match: M5XL68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013301mg PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-32
Identity = 77/133 (57.89%), Postives = 92/133 (69.17%), Query Frame = 1


Query: 1   MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNK-----VETPKGCLAILVGQ--EQQRFF 60
           MGF GD+ +  H  HLNFH  +HFPH  HH  K      + PKGCLA++VGQ  EQQRF 
Sbjct: 1   MGFSGDRDNKHH--HLNFH--LHFPHLLHHHVKNNKEPKDIPKGCLAVMVGQGEEQQRFV 60

Query: 61  IPVIYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGII--------YHDH-- 115
           IPVIY+NHPLF+QLLK+AE+EYGFDQKGPI+IPC V++FRT+QG+I         H H  
Sbjct: 61  IPVIYINHPLFMQLLKEAEEEYGFDQKGPITIPCHVEEFRTVQGMIDRETSVHCRHHHNQ 120

[Close]

BLAST of Csa5G139100 vs. TrEMBL
Match: A0A0D2Q2G7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G265900 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.8e-32
Identity = 73/123 (59.35%), Postives = 88/123 (71.54%), Query Frame = 1


Query: 1   MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVET---PKGCLAILVGQ--EQQRFFIP 60
           MG G +     H  H+NFH H+   H +HH  K +    PKGCLAI+VGQ  EQQRF IP
Sbjct: 1   MGSGDNNKGSHH--HVNFHLHIPHLHGFHHHEKKDLKDIPKGCLAIMVGQGEEQQRFVIP 60

Query: 61  VIYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGII----YHDHHHHHLPVS 115
           VIY+NHPLF+QLLK AEDEYGFDQKGPI+IPC V++FR +QG+I    +H +HHHH  V 
Sbjct: 61  VIYINHPLFMQLLKVAEDEYGFDQKGPITIPCHVEEFRNVQGMIDKDRHHHNHHHHHHVW 120

[Close]

BLAST of Csa5G139100 vs. TAIR10
Match: AT4G00880.1 (AT4G00880.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 7.7e-27
Identity = 59/113 (52.21%), Postives = 74/113 (65.49%), Query Frame = 1


Query: 19  HFHVHFPHFYHHRNKVE-TPKGCLAILVGQ--EQQRFFIPVIYVNHPLFVQLLKKAEDEY 78
           H+  H P  +HH +  E  PKGCLA+ VGQ  EQ+RF IPV+Y NHPLF QLLK+AE+E+
Sbjct: 10  HWSFHIPRLHHHEHDHEKVPKGCLAVKVGQGEEQERFVIPVMYFNHPLFGQLLKEAEEEF 69

Query: 79  GFDQKGPISIPCPVDDFRTLQGII--------------YHDHHHHHLPVSCFR 115
           GF QKG I+IPC V++FR +QG+I              +H HHH+HL + CFR
Sbjct: 70  GFAQKGTITIPCHVEEFRYVQGLIDRENTRFLGTNLLDHHHHHHNHL-IRCFR 121

[Close]

BLAST of Csa5G139100 vs. TAIR10
Match: AT5G53590.1 (AT5G53590.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 9.4e-25
Identity = 52/131 (39.69%), Postives = 76/131 (58.02%), Query Frame = 1


Query: 7   KHHHQHLLHLNFHFHVHFPHFY-----HHRNKVETPKGCLAILVGQEQQ-----RFFIPV 66
           K    H+ H+ F FH H PH +     HH +  + PKGC+AI+VG E       RF +P+
Sbjct: 12  KQSPNHIKHMVFKFHFHVPHLHILPHHHHHHHHDVPKGCVAIMVGHEDDEEGLHRFVVPL 71

Query: 67  IYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGII--------------YHD 114
           ++++HPLF+ LLK+AE EYGF   GPI+IPC VD+F+ +Q +I              +++
Sbjct: 72  VFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVDEFKHVQEVIDEETHRRHSHGGHGHNN 131

[Close]

BLAST of Csa5G139100 vs. TAIR10
Match: AT2G46690.1 (AT2G46690.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-23
Identity = 56/99 (56.57%), Postives = 67/99 (67.68%), Query Frame = 1


Query: 35  ETPKGCLAILVG---QEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDD 94
           + PKGCLAI VG   +EQQRF +PV+Y NHPLF+QLLK+AEDEYGFDQKG I+IPC V++
Sbjct: 23  DVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEE 82

Query: 95  FRTLQGII--------YHDHHH--------HHLPVSCFR 115
           FR +Q +I         ++HHH        HHL V CFR
Sbjct: 83  FRYVQALIDGERSVYNGNNHHHRHGGRDQYHHL-VGCFR 120

[Close]

BLAST of Csa5G139100 vs. TAIR10
Match: AT3G61900.1 (AT3G61900.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 90.5 bits (223), Expect = 7.7e-19
Identity = 42/68 (61.76%), Postives = 53/68 (77.94%), Query Frame = 1


Query: 35  ETPKGCLAILVG---QEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDD 94
           + PKGCLAI VG   +E+QRF +PV Y NHPLF+QLL++AE+EYGF+QKG I+IPC V+ 
Sbjct: 29  DVPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEV 88

Query: 95  FRTLQGII 100
           FR +Q +I
Sbjct: 89  FRYVQDMI 96

[Close]

BLAST of Csa5G139100 vs. TAIR10
Match: AT5G20810.2 (AT5G20810.2 SAUR-like auxin-responsive protein family )

HSP 1 Score: 73.9 bits (180), Expect = 7.5e-14
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1


Query: 35  ETPKGCLAILVGQEQQRFFIPVIYVNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRT 94
           + PKG LA+ VG E +RF IP  Y++H LF  LL+KAE+E+GFDQ G ++IPC V+ F+ 
Sbjct: 78  DVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVETFKY 137

Query: 95  L 96
           L
Sbjct: 138 L 138

[Close]

BLAST of Csa5G139100 vs. NCBI nr
Match: gi|700194653|gb|KGN49830.1| (hypothetical protein Csa_5G139100 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 6.2e-71
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 1


Query: 1   MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVN 60
           MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVN
Sbjct: 1   MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVN 60

Query: 61  HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSH 120
           HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSH
Sbjct: 61  HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSH 120

Query: 121 C 122
           C
Sbjct: 121 C 121

[Close]

BLAST of Csa5G139100 vs. NCBI nr
Match: gi|659074522|ref|XP_008437649.1| (PREDICTED: auxin-induced protein X15 [Cucumis melo])

HSP 1 Score: 258.8 bits (660), Expect = 4.6e-66
Identity = 115/121 (95.04%), Postives = 119/121 (98.35%), Query Frame = 1


Query: 1   MGFGGDKHHHQHLLHLNFHFHVHFPHFYHHRNKVETPKGCLAILVGQEQQRFFIPVIYVN 60
           MGFGGDKHH QHLLHLNFHFH+HFPHF+HHRNKVETPKGCLAILVGQEQQRF IPVIYVN
Sbjct: 1   MGFGGDKHH-QHLLHLNFHFHIHFPHFHHHRNKVETPKGCLAILVGQEQQRFVIPVIYVN 60

Query: 61  HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHDHHHHHLPVSCFRDSSHSH 120
           HPLFVQLLK+AEDEYGFDQKGPISIPCPVDDFRTLQGII+HDHHHHHLPVSCFRDSSHSH
Sbjct: 61  HPLFVQLLKEAEDEYGFDQKGPISIPCPVDDFRTLQGIIHHDHHHHHLPVSCFRDSSHSH 120

Query: 121 C 122
           C
Sbjct: 121 C 120

[Close]

BLAST of Csa5G139100 vs. NCBI nr
Match: gi|568880545|ref|XP_006493175.1| (PREDICTED: auxin-responsive protein SAUR32 [Citrus sinensis])

HSP 1 Score: 152.1 bits (383), Expect = 6.1e-34
Identity = 75/123 (60.98%), Postives = 90/123 (73.17%), Query Frame = 1


Query: 5   GDKHHHQHLLHLNFHFHVHFPHFYHHRNKVET---PKGCLAILVGQE---QQRFFIPVIY 64
           G  +HH    HLNFH H+   HF+HH  K E    PKGCLAILVGQE   QQ+F IPVIY
Sbjct: 2   GTGYHH----HLNFHLHLPHIHFHHHGKKEEMRNIPKGCLAILVGQEGEEQQKFVIPVIY 61

Query: 65  VNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGII-------YHDHHHHHLPVS 115
           +NHPLF+QLLK+AE+EYGFDQKGPI++PC V++FRT+QG+I       +H HHHHH  V 
Sbjct: 62  INHPLFMQLLKEAEEEYGFDQKGPITLPCHVEEFRTVQGMIDKDRSLLHHHHHHHHHHVW 120

[Close]

BLAST of Csa5G139100 vs. NCBI nr
Match: gi|951041006|ref|XP_014517828.1| (PREDICTED: auxin-responsive protein SAUR32 [Vigna radiata var. radiata])

HSP 1 Score: 151.4 bits (381), Expect = 1.0e-33
Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 1


Query: 7   KHHHQHLLHLNFHFHVHFPHFYHHRNKV----ETPKGCLAILVGQ--EQQRFFIPVIYVN 66
           KHHH H  H++FH H+   HF+HH  +     + PKGCLA+LVGQ  EQQRF IPV+Y+N
Sbjct: 13  KHHHHHHYHMSFHLHIPHLHFHHHHQEKKDLKDVPKGCLAVLVGQGEEQQRFVIPVMYMN 72

Query: 67  HPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHD---HHHHHLPVSCFR 115
           HPLF++LLK+AEDEYGF QKGPI+IPC V+ FRT+QGII  +   HHHHH    CF+
Sbjct: 73  HPLFMKLLKEAEDEYGFQQKGPITIPCHVEHFRTVQGIIDREKYLHHHHHHHAWCFK 129

[Close]

BLAST of Csa5G139100 vs. NCBI nr
Match: gi|567897444|ref|XP_006441210.1| (hypothetical protein CICLE_v10022912mg [Citrus clementina])

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-33
Identity = 75/120 (62.50%), Postives = 89/120 (74.17%), Query Frame = 1


Query: 5   GDKHHHQHLLHLNFHFHVHFPHFYHHRNKVET---PKGCLAILVGQE---QQRFFIPVIY 64
           G  +HH    HLNFH H+   HF+HH  K E    PKGCLAILVGQE   QQ+F IPVIY
Sbjct: 2   GTGYHH----HLNFHLHLPHIHFHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIY 61

Query: 65  VNHPLFVQLLKKAEDEYGFDQKGPISIPCPVDDFRTLQGIIYHD----HHHHHLPVSCFR 115
           +NHPLF+QLLK+AE+EYGFDQKGPI++PC V++FRT+QG+I  D    HHHHH  V CFR
Sbjct: 62  INHPLFMQLLKEAEEEYGFDQKGPITLPCHVEEFRTVQGMIDKDRSLLHHHHHHHVWCFR 117

The following BLAST results are available for this feature:

BLAST of Csa5G139100 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU32_ARATH	1.8e-22	56.57	Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1	[more]
SAU36_ARATH	7.3e-11	45.71	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1	[more]
AX10A_SOYBN	1.6e-10	49.21	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	[more]
AXX15_SOYBN	6.1e-10	46.15	Auxin-induced protein X15 OS=Glycine max PE=2 SV=1	[more]
ARG7_VIGRR	2.3e-09	47.54	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]

BLAST of Csa5G139100 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJC7_CUCSA	4.4e-71	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G139100 PE=4 SV=1	[more]
A0A067DMQ5_CITSI	1.6e-33	62.50	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035928mg PE=4 SV=1	[more]
V4TRT5_9ROSI	1.6e-33	62.50	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022912mg PE=4 SV=1	[more]
M5XL68_PRUPE	1.8e-32	57.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013301mg PE=4 SV=1	[more]
A0A0D2Q2G7_GOSRA	1.8e-32	59.35	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G265900 PE=4 SV=1	[more]

BLAST of Csa5G139100 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G00880.1	7.7e-27	52.21	SAUR-like auxin-responsive protein family	[more]
AT5G53590.1	9.4e-25	39.69	SAUR-like auxin-responsive protein family	[more]
AT2G46690.1	1.0e-23	56.57	SAUR-like auxin-responsive protein family	[more]
AT3G61900.1	7.7e-19	61.76	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	7.5e-14	54.10	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa5G139100 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194653\|gb\|KGN49830.1\|	6.2e-71	100.00	hypothetical protein Csa_5G139100 [Cucumis sativus]	[more]
gi\|659074522\|ref\|XP_008437649.1\|	4.6e-66	95.04	PREDICTED: auxin-induced protein X15 [Cucumis melo]	[more]
gi\|568880545\|ref\|XP_006493175.1\|	6.1e-34	60.98	PREDICTED: auxin-responsive protein SAUR32 [Citrus sinensis]	[more]
gi\|951041006\|ref\|XP_014517828.1\|	1.0e-33	59.83	PREDICTED: auxin-responsive protein SAUR32 [Vigna radiata var. radiata]	[more]
gi\|567897444\|ref\|XP_006441210.1\|	2.3e-33	62.50	hypothetical protein CICLE_v10022912mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
biological_process	GO:1900140	regulation of seedling development
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU103952	cucumber EST collection version 3.0	transcribed_cluster
CU174661	cucumber EST collection version 3.0	transcribed_cluster
CU178185	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa5G139100.1	Csa5G139100.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU103952	CU103952	transcribed_cluster
CU174661	CU174661	transcribed_cluster
CU178185	CU178185	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 32..95 score: 5.0
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 29..107 score: 2.6
None	No IPR available	PANTHER	PTHR31374:SF8	SUBFAMILY NOT NAMED	coord: 29..107 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa5G139100	Cla004867	Watermelon (97103) v1	cuwmB408
Csa5G139100	Cla021120	Watermelon (97103) v1	cuwmB397
Csa5G139100	MELO3C005991	Melon (DHL92) v3.5.1	cumeB402
Csa5G139100	MELO3C005913	Melon (DHL92) v3.5.1	cumeB357
Csa5G139100	Lsi05G021640	Bottle gourd (USVL1VR-Ls)	culsiB378
Csa5G139100	MELO3C005913.2	Melon (DHL92) v3.6.1	cumedB336
Csa5G139100	MELO3C005991.2	Melon (DHL92) v3.6.1	cumedB386
Csa5G139100	Cla97C05G080550	Watermelon (97103) v2	cuwmbB381
Csa5G139100	CSPI05G02860	Wild cucumber (PI 183967)	cpicuB240
Csa5G139100	CSPI03G07590	Wild cucumber (PI 183967)	cpicuB136
Csa5G139100	Cucsa.202430	Cucumber (Gy14) v1	cgycuB309
Csa5G139100	Cucsa.259570	Cucumber (Gy14) v1	cgycuB369
Csa5G139100	CmaCh02G011440	Cucurbita maxima (Rimu)	cmacuB612
Csa5G139100	CmaCh15G010040	Cucurbita maxima (Rimu)	cmacuB292
Csa5G139100	CmoCh14G021980	Cucurbita moschata (Rifu)	cmocuB251
Csa5G139100	CmoCh02G011750	Cucurbita moschata (Rifu)	cmocuB603
Csa5G139100	Cp4.1LG03g15990	Cucurbita pepo (Zucchini)	cpecuB622
Csa5G139100	Cp4.1LG13g03320	Cucurbita pepo (Zucchini)	cpecuB188
Csa5G139100	Cp4.1LG05g05810	Cucurbita pepo (Zucchini)	cpecuB730
Csa5G139100	CsGy3G007730	Cucumber (Gy14) v2	cgybcuB125
Csa5G139100	Carg26780	Silver-seed gourd	carcuB0604

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa5G139100	Csa3G118740	Cucumber (Chinese Long) v2	cucuB095

The following block(s) are covering this gene:


Gene	Organism	Block
Csa5G139100	Watermelon (97103) v2	cuwmbB336
Csa5G139100	Wax gourd	cuwgoB453
Csa5G139100	Cucurbita moschata (Rifu)	cmocuB279
Csa5G139100	Watermelon (Charleston Gray)	cuwcgB364
Csa5G139100	Cucumber (Gy14) v2	cgybcuB224
Csa5G139100	Silver-seed gourd	carcuB0536