Csa2G258790 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G258790
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-induced protein 6B; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr2 : 12589590 .. 12590155 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCATTTTAAGTACTATTTCCTCTTCTAGATTGCTCTTACCAATCAGATCAGAACTTTAGATCTTTTTGACAGCCTTTCATCTCAAGAAAATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGAAGGATGAACAGCAGAGCACAAATTGCCATTTTTTTACAACCTTTTCTGGTTGTTTCTGACTCTTTTTGTTTTTTTGACTCGTAATAGAATTTTGTAGAATGGAATGCCCTTATTGCCTGTAAATGAATGCCATACGGTGCATTTACCAACAGAAATTAATTAAAAGGATACACAAATTTACC

mRNA sequence

ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGA

Protein sequence

MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS*

Homology

[Close]

BLAST of Csa2G258790 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21
Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 1


Query: 13 KQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFH 72
          K+IL   +G        PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +EEEFGF 
Sbjct: 11 KKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 73 HPQGGLTIPCKEDAFVDLTSKLQ 96
          HP GGLTIPC ED F+++TS+LQ
Sbjct: 71 HPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258790 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.2e-21
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 1


Query: 17 KMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q KR++VPISYLN  SFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFVDLTSKLQ 96
          GLTIPC ED F+++TS+ Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Csa2G258790 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.2e-21
Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 1


Query: 6  LSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYA 65
          ++LV  +    K+ S  T      PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +
Sbjct: 1  MALVRSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKS 60

Query: 66 EEEFGFHHPQGGLTIPCKEDAFVDLTSKLQ 96
          E+EFGF HP GGLTIPC ED F+++TS+LQ
Sbjct: 61 EDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258790 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.4e-20
Identity = 48/79 (60.76%), Postives = 57/79 (72.15%), Query Frame = 1


Query: 17 KMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q KR++VP+SYL+  SFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFVDLTSKLQ 96
          GLTIPC ED F+++TS+LQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258790 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.4e-20
Identity = 51/94 (54.26%), Postives = 64/94 (68.09%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MG R    +P +++     +  + K + V KG++AVYVGE +M+RFV+P+SYLN  SFQ 
Sbjct: 1  MGFR----LPGIRKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPSFQD 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKL 95
          LLS AEEEFG+HHP GGLTIPC ED F  +TS L
Sbjct: 61 LLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFL 89

[Close]

BLAST of Csa2G258790 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.6e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of Csa2G258790 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.4e-41
Identity = 85/97 (87.63%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MG R LSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLND SFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEEEFGFHHP GGLTIPCKEDAFVDLTS+LQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Csa2G258790 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.0e-39
Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIR LSLVPH KQILK+QSGLTK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LL +AEEEFGFHHPQGGLTIPCKEDAF ++TSKLQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Csa2G258790 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-37
Identity = 79/97 (81.44%), Postives = 85/97 (87.63%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MG+  L LVPH K+ILKMQS  TK QL VPKGHVAVYVGEIQ KRFVVP+SYLND SFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS AEEEFGFHHP GGLTIPCKEDAFVDLTS+L+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Csa2G258790 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 4.3e-37
Identity = 78/97 (80.41%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIR LSLVP+ KQILK+QSG  K QL VPKGHVA+YVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LL+++EEEFGFHHPQG LTIPCKEDAF+DLTS+LQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Csa2G258790 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.8 bits (268), Expect = 3.7e-24
Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILK----MQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDL 60
          M IR   ++   KQIL+    + S  +   L VPKG++AVYVGE  MKRFVVP+SYL+  
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSK 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL S+
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Csa2G258790 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.6 bits (257), Expect = 7.1e-23
Identity = 57/105 (54.29%), Postives = 71/105 (67.62%), Query Frame = 1


Query: 1   MGIRFLSLVPHVKQILKMQSGLTKKQLG------VPKGHVAVYVGE---IQMKRFVVPIS 60
           MG+   ++    KQILK+ S   + +        VPKGHVAVYVGE   ++ KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDL-TSKLQ 96
           +LN  SF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  S+LQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Csa2G258790 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 103.2 bits (256), Expect = 9.2e-23
Identity = 53/98 (54.08%), Postives = 66/98 (67.35%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEI-QMKRFVVPISYLNDLSFQ 60
          M IR   ++   KQ+LK  S  +   + +PKGH+AVYVGE+ Q +RFVVP++YL+   FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLSH-SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          +LL  AEEEFGF HP GGLTIPC E  F+DL S+L  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Csa2G258790 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 102.1 bits (253), Expect = 2.1e-22
Identity = 50/83 (60.24%), Postives = 59/83 (71.08%), Query Frame = 1


Query: 13 KQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFH 72
          K+IL   +G        PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +EEEFGF 
Sbjct: 11 KKILSRSTGAGS---AAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFD 70

Query: 73 HPQGGLTIPCKEDAFVDLTSKLQ 96
          HP GGLTIPC ED F+++TS+LQ
Sbjct: 71 HPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258790 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 101.3 bits (251), Expect = 3.5e-22
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 1


Query: 17 KMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q KR++VPISYLN  SFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFVDLTSKLQ 96
          GLTIPC ED F+++TS+ Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Csa2G258790 vs. NCBI nr
Match: gi|700206764|gb|KGN61883.1| (hypothetical protein Csa_2G258790 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 2.3e-47
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of Csa2G258790 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40
Identity = 85/97 (87.63%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MG R LSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLND SFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLS+AEEEFGFHHP GGLTIPCKEDAFVDLTS+LQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Csa2G258790 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-40
Identity = 85/97 (87.63%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIR LSLVPH KQ+LKMQSG TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LLSYAEEEFGFHHPQGGLTIPCKED F+DLTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Csa2G258790 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-40
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIR LSLVPH KQILKMQSG TK +L VPKGHVAVYVGEIQ KRFVVPISYLND SFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LL+ AEEEFGFHHP GGLTIPCKEDAFVDLTS+LQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Csa2G258790 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 8.6e-39
Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIR LSLVPH KQILK+QSGLTK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 98
          LL +AEEEFGFHHPQGGLTIPCKEDAF ++TSKLQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

The following BLAST results are available for this feature:

BLAST of Csa2G258790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	3.6e-21	60.24	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	6.2e-21	62.03	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	6.2e-21	55.56	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	2.4e-20	60.76	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
AX6B_SOYBN	2.4e-20	54.26	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]

BLAST of Csa2G258790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA3_CUCSA	1.6e-47	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	8.4e-41	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	6.0e-39	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	1.9e-37	81.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	4.3e-37	80.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]

BLAST of Csa2G258790 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	3.7e-24	56.70	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	7.1e-23	54.29	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	9.2e-23	54.08	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.1e-22	60.24	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.5e-22	62.03	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa2G258790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206764\|gb\|KGN61883.1\|	2.3e-47	100.00	hypothetical protein Csa_2G258790 [Cucumis sativus]	[more]
gi\|700206757\|gb\|KGN61876.1\|	1.2e-40	87.63	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	1.2e-40	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	7.8e-40	86.60	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	8.6e-39	84.54	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU091596	cucumber EST collection version 3.0	transcribed_cluster
CU114967	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G258790.1	Csa2G258790.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU114967	CU114967	transcribed_cluster
CU091596	CU091596	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 17..92 score: 1.7
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 4.4
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G258790	MELO3C034603.2	Melon (DHL92) v3.6.1	cumedB089
Csa2G258790	CSPI02G13020	Wild cucumber (PI 183967)	cpicuB065
Csa2G258790	Cucsa.169390	Cucumber (Gy14) v1	cgycuB257

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G258790	Silver-seed gourd	carcuB0341
Csa2G258790	Watermelon (97103) v2	cuwmbB110
Csa2G258790	Wax gourd	cuwgoB182
Csa2G258790	Cucumber (Chinese Long) v2	cucuB077
Csa2G258790	Cucurbita maxima (Rimu)	cmacuB542
Csa2G258790	Cucurbita maxima (Rimu)	cmacuB588
Csa2G258790	Cucurbita moschata (Rifu)	cmocuB531
Csa2G258790	Cucurbita moschata (Rifu)	cmocuB577
Csa2G258790	Melon (DHL92) v3.5.1	cumeB098
Csa2G258790	Watermelon (Charleston Gray)	cuwcgB104
Csa2G258790	Watermelon (97103) v1	cuwmB155
Csa2G258790	Cucurbita pepo (Zucchini)	cpecuB267
Csa2G258790	Cucurbita pepo (Zucchini)	cpecuB540
Csa2G258790	Cucurbita pepo (Zucchini)	cpecuB704
Csa2G258790	Bottle gourd (USVL1VR-Ls)	culsiB093
Csa2G258790	Cucumber (Gy14) v2	cgybcuB056
Csa2G258790	Cucumber (Gy14) v2	cgybcuB295
Csa2G258790	Melon (DHL92) v3.6.1	cumedB087