CSPI02G13020 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G13020
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Auxin responsive SAUR protein
Location	Chr2 : 13161078 .. 13162975 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGAAGGATGAACAGCAGAGCACAAATTGCCATTTTTTTACAACCTTTTCTGGTTGTTTCTGACTCTTTTTGTTTTTTTTGACTCGTAATAGAATTTTGTAGAATGGAATGCCCTTATTGCCTGTAAATGAATGCCATACGGTGCATTTACCAACAGAAATTAATTAAAAGGATACACAAATTTACCCTCAATTTCTTTATAGCCTTTTCTTGCTGCTTTATTTGTAATGGTTAACTTGCAATCCAGGGAACTAAGAAAATTTGATATATCACTAAAGAAACTGGGTACCATCTTGAAGATTCAAACTTCAAAGTTTAACATATCCGAAGCAAACTTGATTCTTATGTGCCAATTTAAAATTTTCGATTGAAAGTTTACTCTTGGTTTGATCTAATAAAAAAGGTCCTTATCCATCATATGCGCCACTCCAGTTAATTATGTAGTATTGATGGCTGAGATTGGGAGAGCTGTCTTATAGAAGACATAGTGAGAAATTACTTATGATATATATTTACTGTAAAATATGATTCAGTATTTGAGATTTGTCTTGGAGGCCAACAAATAAATAACATTTACACTTTTTGATGTTGGGTGTTTATGAAGAATTAAAACGTTACTTTGAAAAAGAGAGAGAATCTAATTTTAAAGATTTTTCTTTTTGGATTGAACAACTTTTCTGCAACTGCTTTGTGTTTCATAACATTGCCAATGCAACTAGTAGATAATTATAACTTATCACATGGATATGCTTCCGCTTATTTTTCCTTTTCTGCTCTCTTTCATTTCAACCATATAATTTCTTTATTTGAAAATGTGGACCAAATCTAACTAAGAATTGAGACACATGAGGAAGTGAGTGTATAACAATCAACTGAACAAATCCATGTGAGCTTTAAATAGAACTGGCCCCCTAACACACCAAGCTGCTATCCACTCTCCACTTGCTTCCCTCTTTAACTCTATAAATACACATGTTAAAGAAGTTACCAGTACCCAACTTAAATCTCTCTTACAAGTTCTTCTTTCAATCACTCCAATTTCCCATTGATTCTTATAGTTCTCTCCCTTGAATCAATTTTAGACATGGGAATCCGATTGCCTTCGCTACTCCTCAATGCCAAGCAAATTCTCAAAAAGCATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGAAAGATTTTTGTTCAAATGAAATCCCTTCCTCAACCTCCCAAGTTTTGCCAAATATAGTTTTGTTCATTTTGAGTTAGACAAAGTAGAAGGCCGCTGAACAGTTTTTTTTCTTTCTTTTTTTTGTAAATTAGGGGATAGAAAAGGTTGTTAATTTGCCTTTCTTCCTGATCTTCGTAATGTGTATAAAGTTGTATCAACACGGTAACAACAGGAGTAATAGAAAATTACACTTGTTTACAGATAAA

mRNA sequence

ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAACCTTTTCTTGCTGCTTTATTTGTAATGGTTAACTTGCAATCCAGGGAACTAAGAAAATTTGATATATCACTAAAGAAACTGGTTCTCTCCCTTGAATCAATTTTAGACATGGGAATCCGATTGCCTTCGCTACTCCTCAATGCCAAGCAAATTCTCAAAAAGCATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGA

Coding sequence (CDS)

ATGGGGATTCGTTTTCTATCTTTGGTTCCTCATGTCAAGCAAATTCTGAAGATGCAGTCAGGTTTAACCAAAAAACAGTTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAACCTTTTCTTGCTGCTTTATTTGTAATGGTTAACTTGCAATCCAGGGAACTAAGAAAATTTGATATATCACTAAAGAAACTGGTTCTCTCCCTTGAATCAATTTTAGACATGGGAATCCGATTGCCTTCGCTACTCCTCAATGCCAAGCAAATTCTCAAAAAGCATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGA

Homology

[Close]

BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.5e-25
Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 1


Query: 140 LLNAKQILKKHVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNH 199
           LL AK+IL +      PKG +AVYVG+ Q+KR+LVP+SYL+ P+F ALL ++EEEFG++H
Sbjct: 7   LLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDH 66

Query: 200 PMGGLTIPCREDAFMDLTSRL 221
           PMGGLTIPC ED F+++TSRL
Sbjct: 67  PMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.6e-24
Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 1


Query: 140 LLNAKQILKKHVQF--DVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGY 199
           LL AK+IL +        PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG+
Sbjct: 7   LLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 66

Query: 200 NHPMGGLTIPCREDAFMDLTSRLH 222
           +HPMGGLTIPC ED F+++TSRLH
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.2e-24
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 140 LLNAKQILKKHVQFD--VPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGY 199
           LL AK+IL +        PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG+
Sbjct: 7   LLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 66

Query: 200 NHPMGGLTIPCREDAFMDLTSRL 221
           +HPMGGLTIPC ED F+++TSRL
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23
Identity = 50/83 (60.24%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 140 LLNAKQILKKHVQF--DVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGY 199
           LL AK+IL +        PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++E+EFG+
Sbjct: 7   LLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 66

Query: 200 NHPMGGLTIPCREDAFMDLTSRL 221
           +HPMGGLTIPC ED F+++TSRL
Sbjct: 67  DHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CSPI02G13020 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-23
Identity = 51/82 (62.20%), Postives = 65/82 (79.27%), Query Frame = 1


Query: 140 LLNAKQILKKHVQFD--VPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGY 199
           LL AK+IL +        PKG +AVYVG+ Q+KR+LVPISYLN P+F ALL ++EEEFG+
Sbjct: 7   LLGAKKILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 66

Query: 200 NHPMGGLTIPCREDAFMDLTSR 220
           +HPMGGLTIPC ED F+++TSR
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A103Y7U2_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_017573 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.9e-52
Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 1


Query: 5   FLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSY 64
           F+ L   +K   K+QS   + Q  VPKG++A+YVGE Q  RFVVP+S+L    FQ LL  
Sbjct: 10  FIHLQFVLKHFSKLQSLCNRNQWDVPKGYLAIYVGEKQKTRFVVPVSFLTHPQFQDLLRQ 69

Query: 65  AEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELRKFDISLKKLVL 124
            E+EFG++H  GGLTI C+EDAF DLTSKL          ++  +   R F  +L     
Sbjct: 70  TEDEFGYNHSMGGLTIHCQEDAFADLTSKLP---------ISCYNMLYRIFPSNLTTGKR 129

Query: 125 SLESILDMG-IRLPSLLLNAKQILK------KHVQFDVPKGHIAVYVGDIQRKRFLVPIS 184
             +  LDMG +RLPSL+ NA+   K      +  Q DVPKGH+AVYVG+IQ++RF+VPIS
Sbjct: 130 VCDRFLDMGLVRLPSLIANARCFSKVNSLRSRKYQSDVPKGHLAVYVGEIQKRRFVVPIS 189

Query: 185 YLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS 224
           YL+ P F  LL+ AEEE G++HPMGGLTI C EDAF++LT+RLH+S
Sbjct: 190 YLDQPLFQDLLRHAEEELGFDHPMGGLTICCHEDAFVELTARLHAS 226

[Close]

BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A103Y0U0_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021302 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47
Identity = 109/225 (48.44%), Postives = 141/225 (62.67%), Query Frame = 1


Query: 8   LVPHV---KQILK--MQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLL 67
           L+P +   KQIL+  + +G +   + VPKGH AVYVGE + KRFVVP+S L+  +FQ+LL
Sbjct: 4   LMPRIIQAKQILRRSLSNGSSNTYMAVPKGHFAVYVGEQEKKRFVVPVSLLSQPAFQELL 63

Query: 68  SYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELRKFDISLKKL 127
             AEEEFG++HP GGLT+PC ED F DL S   PFL               K D +L + 
Sbjct: 64  YRAEEEFGYNHPMGGLTVPCSEDIFTDLAS---PFL--------------NKADCALLRT 123

Query: 128 VLSLESILDMGIRLPSLLLNAKQILKKHVQ-------FDVPKGHIAVYVGDIQRKRFLVP 187
                    M I +P ++  AKQIL++ +          +PKGH AVYVG+ ++KRF+VP
Sbjct: 124 ---------MAILMPRII-QAKQILRRSLSNGSSNKYMVIPKGHFAVYVGEQEKKRFVVP 183

Query: 188 ISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL 221
           +S L+ P F  LL RA++EFGYNHPMGGLTIPC ED F DL SRL
Sbjct: 184 VSLLSQPAFQELLYRADDEFGYNHPMGGLTIPCSEDIFTDLASRL 201

[Close]

BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A0A0LLG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258800 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-46
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 1


Query: 132 MGIRLPSLLLNAKQILKKHVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRA 191
           MGIRLPSLLLNAKQILKKHVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRA
Sbjct: 1   MGIRLPSLLLNAKQILKKHVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRA 60

Query: 192 EEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS 224
           EEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS
Sbjct: 61  EEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS 92

[Close]

BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1


Query: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
          MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQ 96
          LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQ
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQ 95

[Close]

BLAST of CSPI02G13020 vs. TrEMBL
Match: A0A118K004_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021304 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.4e-45
Identity = 100/218 (45.87%), Postives = 133/218 (61.01%), Query Frame = 1


Query: 8   LVPHV---KQILK--MQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLL 67
           L+P +   KQIL+  + +G +   + +PKG+ AVYVGE + KRFVVP+S L+  +FQ+LL
Sbjct: 86  LMPRIIQAKQILRRSLSNGSSNTYMAIPKGYFAVYVGEQEKKRFVVPVSLLSQPAFQELL 145

Query: 68  SYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELRKFDISLKKL 127
           + AEEEFG++HP GGLTIPC ED F DL S                             L
Sbjct: 146 NQAEEEFGYNHPMGGLTIPCSEDIFTDLASHC--------------------------AL 205

Query: 128 VLSLESILDMGIRLPSLLLNAKQILKKHVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHP 187
           + ++  ++   I+   +L  +      +    +PKGH AVYVG+ ++KRF+VP+S L+ P
Sbjct: 206 LRTMAILMPQIIQAKQILRRSLSNGSSNTYMVIPKGHFAVYVGEQEKKRFVVPVSLLSQP 265

Query: 188 TFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRL 221
            F  LL RAEEEFGYNHPMGGLTIPC ED F DLTSRL
Sbjct: 266 AFQELLYRAEEEFGYNHPMGGLTIPCSEDIFTDLTSRL 277

[Close]

BLAST of CSPI02G13020 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-26
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 1


Query: 132 MGIRLPSLLLNAKQILKK---------HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHP 191
           M IR+P +L ++KQIL++             DVPKG++AVYVG+   KRF+VP+SYL+ P
Sbjct: 1   MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 192 TFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLH 222
           +F  LL++AEEEFG++HPMGGLTIPC E+ F+DL SR +
Sbjct: 61  SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CSPI02G13020 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.9 bits (289), Expect = 3.1e-26
Identity = 55/97 (56.70%), Postives = 76/97 (78.35%), Query Frame = 1


Query: 132 MGIRLPSLLLNAKQILKK--HVQFDV--PKGHIAVYVGDI-QRKRFLVPISYLNHPTFMA 191
           M IR+  +L ++KQ+LK   H   +V  PKGH+AVYVG++ Q++RF+VP++YL+HP F  
Sbjct: 1   MAIRISRVLQSSKQLLKSLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQK 60

Query: 192 LLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS 224
           LL++AEEEFG++HPMGGLTIPC E  F+DL SRL +S
Sbjct: 61  LLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CSPI02G13020 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 5.4e-26
Identity = 50/81 (61.73%), Postives = 66/81 (81.48%), Query Frame = 1


Query: 140 LLNAKQILKKHVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNH 199
           LL AK+IL +      PKG +AVYVG+ Q+KR+LVP+SYL+ P+F ALL ++EEEFG++H
Sbjct: 7   LLGAKKILSRSTASAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDH 66

Query: 200 PMGGLTIPCREDAFMDLTSRL 221
           PMGGLTIPC ED F+++TSRL
Sbjct: 67  PMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CSPI02G13020 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-25
Identity = 52/84 (61.90%), Postives = 67/84 (79.76%), Query Frame = 1


Query: 140 LLNAKQILKKHVQF--DVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGY 199
           LL AK+IL +        PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG+
Sbjct: 7   LLVAKKILSRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 66

Query: 200 NHPMGGLTIPCREDAFMDLTSRLH 222
           +HPMGGLTIPC ED F+++TSRLH
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CSPI02G13020 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 3.5e-25
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 1


Query: 140 LLNAKQILKKHVQFD--VPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGY 199
           LL AK+IL +        PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG+
Sbjct: 7   LLGAKKILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 66

Query: 200 NHPMGGLTIPCREDAFMDLTSRL 221
           +HPMGGLTIPC ED F+++TSRL
Sbjct: 67  DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|731387410|ref|XP_002271660.2| (PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera])

HSP 1 Score: 239.6 bits (610), Expect = 5.3e-60
Identity = 130/242 (53.72%), Postives = 163/242 (67.36%), Query Frame = 1


Query: 1   MGIRFLSLVPHVKQILKMQSGLTKKQLG-------VPKGHVAVYVGEIQMKRFVVPISYL 60
           MG R  S++ H KQILK+QS LT+ QL        VPKGH AVYVGE + KRFVVPISYL
Sbjct: 1   MGFRMPSIL-HAKQILKLQSLLTRSQLSISATTAVVPKGHFAVYVGEAEKKRFVVPISYL 60

Query: 61  NDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELR 120
           N+ SFQ+ LS++EEEFGF+HP GG+TIPCKE++F+DLTS+L   L      ++ QS+   
Sbjct: 61  NNPSFQKFLSHSEEEFGFNHPMGGVTIPCKEESFIDLTSRLNHCL------LSSQSKT-- 120

Query: 121 KFDISLKKLVLSLESILDMGIRLPSLLLNAKQILKKH------------VQFDVPKGHIA 180
                             MG R PS++  AKQILK H               +VPKGH A
Sbjct: 121 ------------------MGFRFPSII-QAKQILKLHSLLSRGQSSISATAAEVPKGHFA 180

Query: 181 VYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLH 224
           VYVG+ ++KRF+VPISYLN+P+F  LL  AEEEFG+NHPMGG+TIPC+EDAF++LTSR +
Sbjct: 181 VYVGEAEKKRFVVPISYLNNPSFQKLLSHAEEEFGFNHPMGGVTIPCKEDAFINLTSRFN 214

[Close]

BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|731387429|ref|XP_002271861.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100249577 [Vitis vinifera])

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-59
Identity = 127/228 (55.70%), Postives = 158/228 (69.30%), Query Frame = 1


Query: 1   MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
           MGIR  S+V   KQILK+QS L++ +  VPKGH AVYVGE+Q KR+VVP+SYLN  SF+ 
Sbjct: 1   MGIRLPSMV-QAKQILKLQSLLSRNRTEVPKGHFAVYVGEVQKKRYVVPLSYLNHPSFRS 60

Query: 61  LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELRKFDISLK 120
           LL  AEEEFGF HP GGLTIPC ++AF+DLTS+L                          
Sbjct: 61  LLHQAEEEFGFTHPMGGLTIPCHKNAFIDLTSQLNA------------------------ 120

Query: 121 KLVLSLESILDMGIRLPSLLLNAKQILKKHV-----QFDVPKGHIAVYVGDIQRKRFLVP 180
               S E    MGIRLPS++  AKQILK  +     + +VPKGH AVYVG++++KR++VP
Sbjct: 121 ----SXEEQRIMGIRLPSVV-QAKQILKLQLLLSRNRAEVPKGHFAVYVGEVEKKRYVVP 180

Query: 181 ISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS 224
           ISYLNHP+F +LL +AEEEFG+NHPMGGLTIPC+E AF+DL SRL +S
Sbjct: 181 ISYLNHPSFRSLLCQAEEEFGFNHPMGGLTIPCKEHAFLDLASRLQAS 198

[Close]

BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|731387422|ref|XP_002271994.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100256454 [Vitis vinifera])

HSP 1 Score: 227.6 bits (579), Expect = 2.1e-56
Identity = 124/228 (54.39%), Postives = 154/228 (67.54%), Query Frame = 1


Query: 1   MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60
           MGIR  S+V   KQI K+QS L++ Q  VPKG+ AVYVGE++ +R VVPISYLN  SF+ 
Sbjct: 1   MGIRLPSMV-QAKQIFKLQSYLSRNQAEVPKGYFAVYVGEVEKRRHVVPISYLNHPSFRS 60

Query: 61  LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELRKFDISLK 120
           LL  AEEEFGF+HP GGLTIPC EDAF DLT++L           N    + RK      
Sbjct: 61  LLCQAEEEFGFNHPMGGLTIPCNEDAFADLTTRL-----------NASXGKGRKI----- 120

Query: 121 KLVLSLESILDMGIRLPSLLLNAKQILK-----KHVQFDVPKGHIAVYVGDIQRKRFLVP 180
                      MGIR PS ++ AKQILK        Q +V KGH AVYVG++++KRF+VP
Sbjct: 121 -----------MGIRFPS-MVQAKQILKLQSLLSRNQAEVHKGHFAVYVGEVEKKRFVVP 180

Query: 181 ISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS 224
           ISYLNHP+F +LL +AEEE+ + HPMG LTIPC EDAF+DLTS+L++S
Sbjct: 181 ISYLNHPSFRSLLYQAEEEYRFKHPMGSLTIPCNEDAFIDLTSQLNTS 199

[Close]

BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|645262556|ref|XP_008236815.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103335582 [Prunus mume])

HSP 1 Score: 212.6 bits (540), Expect = 7.0e-52
Identity = 115/226 (50.88%), Postives = 150/226 (66.37%), Query Frame = 1


Query: 1   MGIRFLSLVPHVKQILKMQS-----GLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLND 60
           M IR  S++ H KQIL+  S       ++  +GVPKG +AVYVGE + KR++VPIS+L+ 
Sbjct: 1   MAIRLPSIM-HAKQILRRGSLFANRAASRSAIGVPKGFLAVYVGESEKKRYMVPISFLSQ 60

Query: 61  LSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELRKF 120
            SFQ+LLS AEEEFGF HP GGLTIPC+E+ F++LTS+L    +                
Sbjct: 61  PSFQELLSKAEEEFGFDHPMGGLTIPCREEIFINLTSRLNDMXSTY-------------- 120

Query: 121 DISLKKLVLSLESILDMGIRLPSLLLNAKQILKKHVQFDVPKGHIAVYVGDIQRKRFLVP 180
            +S+    LS+   L   +R  SLL   K      V   VPKG+I VYVG+ ++KRF+VP
Sbjct: 121 -VSMALRYLSMAIRLSQILRQSSLLFANKAASSSSV--GVPKGYIVVYVGEFEKKRFVVP 180

Query: 181 ISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLH 222
           IS+LN P+F  LL++AEEEFGYN+PMGGLTIPCRED F+DLTSRL+
Sbjct: 181 ISFLNQPSFQELLRKAEEEFGYNYPMGGLTIPCREDIFIDLTSRLN 208

[Close]

BLAST of CSPI02G13020 vs. NCBI nr
Match: gi|976918972|gb|KVI04121.1| (hypothetical protein Ccrd_017573, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 212.6 bits (540), Expect = 7.0e-52
Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 1


Query: 5   FLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSY 64
           F+ L   +K   K+QS   + Q  VPKG++A+YVGE Q  RFVVP+S+L    FQ LL  
Sbjct: 10  FIHLQFVLKHFSKLQSLCNRNQWDVPKGYLAIYVGEKQKTRFVVPVSFLTHPQFQDLLRQ 69

Query: 65  AEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQPFLAALFVMVNLQSRELRKFDISLKKLVL 124
            E+EFG++H  GGLTI C+EDAF DLTSKL          ++  +   R F  +L     
Sbjct: 70  TEDEFGYNHSMGGLTIHCQEDAFADLTSKLP---------ISCYNMLYRIFPSNLTTGKR 129

Query: 125 SLESILDMG-IRLPSLLLNAKQILK------KHVQFDVPKGHIAVYVGDIQRKRFLVPIS 184
             +  LDMG +RLPSL+ NA+   K      +  Q DVPKGH+AVYVG+IQ++RF+VPIS
Sbjct: 130 VCDRFLDMGLVRLPSLIANARCFSKVNSLRSRKYQSDVPKGHLAVYVGEIQKRRFVVPIS 189

Query: 185 YLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS 224
           YL+ P F  LL+ AEEE G++HPMGGLTI C EDAF++LT+RLH+S
Sbjct: 190 YLDQPLFQDLLRHAEEELGFDHPMGGLTICCHEDAFVELTARLHAS 226

The following BLAST results are available for this feature:

BLAST of CSPI02G13020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU21_ARATH	9.5e-25	61.73	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]
SAU23_ARATH	3.6e-24	61.90	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU24_ARATH	6.2e-24	61.45	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	1.1e-23	60.24	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU20_ARATH	1.8e-23	62.20	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]

BLAST of CSPI02G13020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A103Y7U2_CYNCS	4.9e-52	50.44	Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_0...	[more]
A0A103Y0U0_CYNCS	3.6e-47	48.44	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021302...	[more]
A0A0A0LLG5_CUCSA	1.4e-46	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258800 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.8e-46	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A118K004_CYNCS	3.4e-45	45.87	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021304...	[more]

BLAST of CSPI02G13020 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	3.1e-26	53.54	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	3.1e-26	56.70	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	5.4e-26	61.73	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	2.0e-25	61.90	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	3.5e-25	61.45	SAUR-like auxin-responsive protein family	[more]

BLAST of CSPI02G13020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|731387410\|ref\|XP_002271660.2\|	5.3e-60	53.72	PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera]	[more]
gi\|731387429\|ref\|XP_002271861.2\|	1.2e-59	55.70	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100249577 [Vitis vini...	[more]
gi\|731387422\|ref\|XP_002271994.2\|	2.1e-56	54.39	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100256454 [Vitis vini...	[more]
gi\|645262556\|ref\|XP_008236815.1\|	7.0e-52	50.88	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103335582 [Prunus mum...	[more]
gi\|976918972\|gb\|KVI04121.1\|	7.0e-52	50.44	hypothetical protein Ccrd_017573, partial [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G13020.1	CSPI02G13020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 150..219 score: 1.9E-24coord: 17..92 score: 1.8
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 133..223 score: 2.7
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 133..223 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G13020	Cla016634	Watermelon (97103) v1	cpiwmB157
CSPI02G13020	Csa7G009100	Cucumber (Chinese Long) v2	cpicuB094
CSPI02G13020	Csa2G258790	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G13020	MELO3C020770	Melon (DHL92) v3.5.1	cpimeB097
CSPI02G13020	MELO3C013386	Melon (DHL92) v3.5.1	cpimeB102
CSPI02G13020	ClCG02G004400	Watermelon (Charleston Gray)	cpiwcgB131
CSPI02G13020	Lsi10G004430	Bottle gourd (USVL1VR-Ls)	cpilsiB091
CSPI02G13020	MELO3C020770.2	Melon (DHL92) v3.6.1	cpimedB089
CSPI02G13020	Bhi10G001518	Wax gourd	cpiwgoB181
CSPI02G13020	Cucsa.169380	Cucumber (Gy14) v1	cgycpiB265
CSPI02G13020	CmoCh20G007940	Cucurbita moschata (Rifu)	cmocpiB536
CSPI02G13020	CmoCh19G007230	Cucurbita moschata (Rifu)	cmocpiB500

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CSPI02G13020	CSPI07G00610	Wild cucumber (PI 183967)	cpicpiB089

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G13020	Cucurbita pepo (Zucchini)	cpecpiB269
CSPI02G13020	Cucurbita pepo (Zucchini)	cpecpiB542
CSPI02G13020	Cucurbita pepo (Zucchini)	cpecpiB668
CSPI02G13020	Cucurbita pepo (Zucchini)	cpecpiB706
CSPI02G13020	Melon (DHL92) v3.6.1	cpimedB087
CSPI02G13020	Cucumber (Gy14) v2	cgybcpiB056
CSPI02G13020	Cucumber (Gy14) v2	cgybcpiB062
CSPI02G13020	Cucumber (Gy14) v2	cgybcpiB303
CSPI02G13020	Silver-seed gourd	carcpiB0347
CSPI02G13020	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G13020	Watermelon (97103) v2	cpiwmbB112
CSPI02G13020	Cucurbita maxima (Rimu)	cmacpiB441
CSPI02G13020	Cucurbita maxima (Rimu)	cmacpiB547
CSPI02G13020	Cucurbita maxima (Rimu)	cmacpiB593
CSPI02G13020	Cucurbita moschata (Rifu)	cmocpiB429
CSPI02G13020	Cucurbita moschata (Rifu)	cmocpiB582
CSPI02G13020	Melon (DHL92) v3.5.1	cpimeB123
CSPI02G13020	Watermelon (Charleston Gray)	cpiwcgB111
CSPI02G13020	Watermelon (97103) v1	cpiwmB150