CmoCh19G007230 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G007230
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr19 : 7520560 .. 7522235 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTCCGTTTGCCTAGGATTGTTCATGCTAAGCAAAGTTTTCGACGATCTTCATCAACTGGAAATGGATCATCCACTGTTGACGTTCCAAAGGGGTACTTCACAGTTTACGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACCATTCCTTGCAGTGAAGACCTTTTCCTTGATCTCACTCGAAGTTTGAAAGACTCATGAGCTAGAGGGATTGATATCTAGAAATTTGTAGCATAGAAAAAGGGTTAGAATAGTACATAATGTAGACCGTAAACACTTTTGAAATGAGAAACTCGATTCTTTAAATTGAAACTTTTGTCCTGTGTTCGTTATTCTATAAATGAACAAAATTTGATGATGAAACTGCTTGAAGGGTGTTATTTGCTAAAAAGACCTGCATAAACTGGATTATACTACTTAAAATGGCTACATGTAGTCCTACATGATAATCCTTCTGCATCTACTTGAAGTGGAAGCTCCCTTGGAAGTTTCATATTGAATCTTCAAGAAATTATCCTATAATACACGATTATTTAGATGATCTCAGCAAGATTGAAAAACATAAAGACAAAACTCAGAATTTGTTAGCTCAAGGTTGCCATGAAATACGAAAAATCAATTAGCTTTGAATCATTGGATTCTTGAGAGACTAATCACTACGGTTAGCATAGTGTTCATGGTGTTCTATCAAGAAGGTGCACTGATATTAGATTATGAACTTGATTCAACTGAGGCTAATACTCATAAACCTACCACATATTTTAGTAGGATCCTTGTAGGGTTGTTCACCATGTAATGACAGCTAAAATTGTTTATTTCCCAAGACAAAACTACCAATAAAAACCATGTTATTGAGGATAAGTCAGCAAATAGAGCTTGACAAGAAGGGCTTCAATGCCTCAAATATGTCTGATCCTTTTAAAAATTTTAGAGGTTTATTCAACTTACTTCTTTAGTTGTCATCGACAAAAGTAGGCCCTGATGTTCTGCAGAAGGTATACCGAATGACCTTATATCACATGAATTTGAAAATCTCATAATGGCTTGGAAGTAACATCCATGTGGGTAGGTCTTGACCTGATGTCTCTCTACCATTGAGTCTTATCTTCTTGTCTTGTCTAGATCTTTGAGTAACCCAAGTCTTTCTTCTATATAAACGTCATGTATATGGATTCACAACCAACAAGAGTCTTTCCATATTCCAATTCTCCGAAGAAATTTCAAGTTTGGTATTCCTTCCGCAGTCTCATATTTATCTTGGAACATATTGCAACATGGGTTTCCGTTTGCCTAGAATTGTTCACGCTAAGAAAAGTCTTCAACGATCTTCATCATCAGGAAATGGAGCATCGTCAAAGGCTGTCGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAAGCACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCACCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAGAGTTCCTCCTCGATCTCACTCGGAGTTTGAATGACTCGTGA

mRNA sequence

ATGGGATTCCGTTTGCCTAGGATTGTTCATGCTAAGCAAAGTTTTCGACGATCTTCATCAACTGGAAATGGATCATCCACTGTTGACGTTCCAAAGGGGTACTTCACAGTTTACGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACCATTCCTTGCAGTGAAGACCTTTTCCTTGATCTCACTCGAAGCCCTGATGTTCTGCAGAAGTCTCATATTTATCTTGGAACATATTGCAACATGGGTTTCCGTTTGCCTAGAATTGTTCACGCTAAGAAAAGTCTTCAACGATCTTCATCATCAGGAAATGGAGCATCGTCAAAGGCTGTCGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAAGCACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCACCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAGAGTTCCTCCTCGATCTCACTCGGAGTTTGAATGACTCGTGA

Coding sequence (CDS)

ATGGGATTCCGTTTGCCTAGGATTGTTCATGCTAAGCAAAGTTTTCGACGATCTTCATCAACTGGAAATGGATCATCCACTGTTGACGTTCCAAAGGGGTACTTCACAGTTTACGTTGGTGAGGTACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACCATTCCTTGCAGTGAAGACCTTTTCCTTGATCTCACTCGAAGCCCTGATGTTCTGCAGAAGTCTCATATTTATCTTGGAACATATTGCAACATGGGTTTCCGTTTGCCTAGAATTGTTCACGCTAAGAAAAGTCTTCAACGATCTTCATCATCAGGAAATGGAGCATCGTCAAAGGCTGTCGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAAGCACAAAAGAAGCGTTTTGTCATTCCACTATCTTACTTGAACCAGCCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCACCCAATGGGTGGCATCACAATTCCTTGCAGTGAAGAAGAGTTCCTCCTCGATCTCACTCGGAGTTTGAATGACTCGTGA

Homology

[Close]

BLAST of CmoCh19G007230 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.7e-28
Identity = 65/100 (65.00%), Postives = 80/100 (80.00%), Query Frame = 1


Query: 111 MGFRLPRIVHAKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 170
           MGFRLP I       +++S + N ASSK+V+VPKGY  VYVG+ + +RF+IP+SYLNQPS
Sbjct: 1   MGFRLPGI-------RKTSIAANQASSKSVEVPKGYLVVYVGD-KMRRFLIPVSYLNQPS 60

Query: 171 FQDLLSQAEEEFGYDHPMGGITIPCSEEEFLLDLTRSLND 211
           FQDLL+QAEEEFGYDHPMGG+TIPC E+EF L +T  LND
Sbjct: 61  FQDLLNQAEEEFGYDHPMGGLTIPCKEDEF-LTVTSHLND 91

[Close]

BLAST of CmoCh19G007230 vs. Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.8e-26
Identity = 63/100 (63.00%), Postives = 77/100 (77.00%), Query Frame = 1


Query: 111 MGFRLPRIVHAKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 170
           MGFR+  IV      +R+S     A+SK VDVPKGY  VYVG+ + +RF IP+SYLN+PS
Sbjct: 1   MGFRIAGIV------RRTSFYTTQAASKRVDVPKGYAAVYVGD-KMRRFTIPVSYLNEPS 60

Query: 171 FQDLLSQAEEEFGYDHPMGGITIPCSEEEFLLDLTRSLND 211
           FQ+LLSQAEEEFGYDHPMGG+TIPC EEEF L++T  LN+
Sbjct: 61  FQELLSQAEEEFGYDHPMGGLTIPCKEEEF-LNVTAHLNE 92

[Close]

BLAST of CmoCh19G007230 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.2e-26
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 1


Query: 111 MGFRLPRIVHAKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 170
           MGFRLP I       +++ S+ N ASSK +D PKGY  VYVGE   KRFVIP+S+LNQP 
Sbjct: 1   MGFRLPGI-------RKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPL 60

Query: 171 FQDLLSQAEEEFGYDHPMGGITIPCSEEEF 201
           FQDLLSQAEEEFGYDHPMGG+TIPCSE+ F
Sbjct: 61  FQDLLSQAEEEFGYDHPMGGLTIPCSEDLF 82

[Close]

BLAST of CmoCh19G007230 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.2e-26
Identity = 62/90 (68.89%), Postives = 71/90 (78.89%), Query Frame = 1


Query: 111 MGFRLPRIVHAKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPS 170
           MGFRLP I       +++S S N ASSKAVDV KGY  VYVGE + +RFVIP+SYLN+PS
Sbjct: 1   MGFRLPGI-------RKASFSANQASSKAVDVEKGYLAVYVGE-KMRRFVIPVSYLNKPS 60

Query: 171 FQDLLSQAEEEFGYDHPMGGITIPCSEEEF 201
           FQDLLSQAEEEFGY HP GG+TIPCSE+ F
Sbjct: 61  FQDLLSQAEEEFGYHHPNGGLTIPCSEDVF 82

[Close]

BLAST of CmoCh19G007230 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 61/92 (66.30%), Postives = 66/92 (71.74%), Query Frame = 1


Query: 1  MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
          MGFRLP I  A             S   D PKGY  VYVGE + KRFVIP+SYLNQPSFQ
Sbjct: 1  MGFRLPGIRKA-------------SKAADAPKGYLAVYVGE-KLKRFVIPVSYLNQPSFQ 60

Query: 61 DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLT 93
          DLLSQAEEEFGYDHPMGG+TIPCSED+F  +T
Sbjct: 61 DLLSQAEEEFGYDHPMGGLTIPCSEDVFQCIT 78

[Close]

BLAST of CmoCh19G007230 vs. TrEMBL
Match: A0A118K004_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021304 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-60
Identity = 118/208 (56.73%), Postives = 157/208 (75.48%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           M   +PRI+ AKQ  RRS S G+ ++ + +PKGYF VYVGE +KKRFV+P+S L+QP+FQ
Sbjct: 83  MAILMPRIIQAKQILRRSLSNGSSNTYMAIPKGYFAVYVGEQEKKRFVVPVSLLSQPAFQ 142

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRIVH 120
           +LL+QAEEEFGY+HPMGG+TIPCSED+F DL     +L+           M   +P+I+ 
Sbjct: 143 ELLNQAEEEFGYNHPMGGLTIPCSEDIFTDLASHCALLR----------TMAILMPQIIQ 202

Query: 121 AKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQAEE 180
           AK+ L+RS S  NG+S+  + +PKG+F VYVGE +KKRFV+P+S L+QP+FQ+LL +AEE
Sbjct: 203 AKQILRRSLS--NGSSNTYMVIPKGHFAVYVGEQEKKRFVVPVSLLSQPAFQELLYRAEE 262

Query: 181 EFGYDHPMGGITIPCSEEEFLLDLTRSL 209
           EFGY+HPMGG+TIPCSE+ F  DLT  L
Sbjct: 263 EFGYNHPMGGLTIPCSEDIF-TDLTSRL 277

[Close]

BLAST of CmoCh19G007230 vs. TrEMBL
Match: A0A103Y0W3_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021301 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.0e-59
Identity = 118/221 (53.39%), Postives = 158/221 (71.49%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           M   +PRI+ AKQ  RRS S G+ ++ + +PKG+F VYVGE +KKRFV+PLS L+QP+FQ
Sbjct: 233 MAILMPRILQAKQILRRSLSNGSSNTYMAIPKGHFAVYVGEQEKKRFVVPLSLLSQPAFQ 292

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPD----------VLQKSHIYLGTYC- 120
           +LL +AEEEFGY+HPMGG+TIPCSED+F+DL    D          V +++H+ L   C 
Sbjct: 293 ELLYKAEEEFGYNHPMGGLTIPCSEDIFIDLASPIDGYKPHAWDHGVGRQNHVILHELCL 352

Query: 121 ----------NMGFRLPRIVHAKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRF 180
                      M   +PRI+ AK+ L+RS S  NG+S+  + +PKGYF VYVG+ +KKRF
Sbjct: 353 YDKAEGALLRKMAILMPRIIQAKQILRRSLS--NGSSNTYMAIPKGYFAVYVGKQEKKRF 412

Query: 181 VIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCSEEEF 201
           V+P+S L+QP+FQ+LL QAEEEFGY+H MGG+TIPCSE+ F
Sbjct: 413 VVPVSLLSQPAFQELLYQAEEEFGYNHRMGGLTIPCSEDMF 451

[Close]

BLAST of CmoCh19G007230 vs. TrEMBL
Match: A0A103Y0U0_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021302 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.3e-59
Identity = 115/200 (57.50%), Postives = 156/200 (78.00%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           M   +PRI+ AKQ  RRS S G+ ++ + VPKG+F VYVGE +KKRFV+P+S L+QP+FQ
Sbjct: 1   MAILMPRIIQAKQILRRSLSNGSSNTYMAVPKGHFAVYVGEQEKKRFVVPVSLLSQPAFQ 60

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRIVH 120
           +LL +AEEEFGY+HPMGG+T+PCSED+F DL  SP + +     L T   M   +PRI+ 
Sbjct: 61  ELLYRAEEEFGYNHPMGGLTVPCSEDIFTDLA-SPFLNKADCALLRT---MAILMPRIIQ 120

Query: 121 AKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQAEE 180
           AK+ L+RS S  NG+S+K + +PKG+F VYVGE +KKRFV+P+S L+QP+FQ+LL +A++
Sbjct: 121 AKQILRRSLS--NGSSNKYMVIPKGHFAVYVGEQEKKRFVVPVSLLSQPAFQELLYRADD 180

Query: 181 EFGYDHPMGGITIPCSEEEF 201
           EFGY+HPMGG+TIPCSE+ F
Sbjct: 181 EFGYNHPMGGLTIPCSEDIF 194

[Close]

BLAST of CmoCh19G007230 vs. TrEMBL
Match: A0A118K2C1_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017564 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-59
Identity = 117/200 (58.50%), Postives = 150/200 (75.00%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           M   +PRI+ AKQ  RRS S G+ +  + +PKGYF VYVGE +KKRFV+P++ L QP+FQ
Sbjct: 59  MAIFMPRIIQAKQILRRSLSNGSSNIYMAIPKGYFVVYVGEQEKKRFVVPIALLGQPAFQ 118

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRIVH 120
           +LL QAEEEFGY+H  GG+TIPCSED+F+DL  SPD        LG    M   +PRI+ 
Sbjct: 119 ELLCQAEEEFGYNHLRGGLTIPCSEDMFIDLA-SPD-----PALLG---KMAILMPRIIQ 178

Query: 121 AKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQAEE 180
           AK+ L+RS S  NG+S+  + +PKGYF VYVGE +KKRFV+P+S L+QP+FQ+LL QAEE
Sbjct: 179 AKQILRRSLS--NGSSNTYMAIPKGYFAVYVGEQEKKRFVVPISLLSQPAFQELLCQAEE 238

Query: 181 EFGYDHPMGGITIPCSEEEF 201
           EFGY+HPMGG+TIPC E+ F
Sbjct: 239 EFGYNHPMGGLTIPCKEDIF 247

[Close]

BLAST of CmoCh19G007230 vs. TrEMBL
Match: A0A061E6C6_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006746 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.2e-55
Identity = 117/212 (55.19%), Postives = 153/212 (72.17%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNG--SSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPS 60
           M  R+PRI+HAKQ  R+S    N   S++ DVP+G+F VYVGE QK+RFV+P S LNQPS
Sbjct: 1   MAIRVPRIMHAKQILRQSKLFANQAVSTSTDVPEGFFAVYVGEGQKERFVVPTSVLNQPS 60

Query: 61  FQDLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRI 120
           FQ LLS AEEEFG++HPMGG+TIPC E++F+DLT     L ++   + T         R 
Sbjct: 61  FQKLLSIAEEEFGFNHPMGGLTIPCREEVFIDLTSRLSWLTRTRKAMAT---------RF 120

Query: 121 VHAKKSLQRS-SSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQ 180
           + AK+ L+RS  ++   AS+    VPKG+  VYVGE QKKRFV+P+++LNQPSFQ LLS+
Sbjct: 121 L-AKQILRRSVFAASKAASTTGEVVPKGFLAVYVGETQKKRFVVPVTFLNQPSFQALLSK 180

Query: 181 AEEEFGYDHPMGGITIPCSEEEFLLDLTRSLN 210
           +EEEFG+DHPMGG+TIPC EE F +++T  LN
Sbjct: 181 SEEEFGFDHPMGGLTIPCREETF-INVTSQLN 201

[Close]

BLAST of CmoCh19G007230 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29
Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 1


Query: 1  MGFRLPRIVHAKQSFRRSS---STGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQP 60
          M  R+PR++ + +   R +   S+ + SS++DVPKGY  VYVGE   KRFV+P+SYL+QP
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQDLLSQAEEEFGYDHPMGGITIPCSEDLFLDL 92
          SFQDLL +AEEEFG+DHPMGG+TIPCSE++F+DL
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDL 94

[Close]

BLAST of CmoCh19G007230 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 50/75 (66.67%), Postives = 63/75 (84.00%), Query Frame = 1


Query: 18 SSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMG 77
          S STG GS+    PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++EEEFG+DHPMG
Sbjct: 15 SRSTGAGSAA---PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 74

Query: 78 GITIPCSEDLFLDLT 93
          G+TIPC ED F+++T
Sbjct: 75 GLTIPCPEDTFINVT 86

[Close]

BLAST of CmoCh19G007230 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 6.2e-24
Identity = 48/85 (56.47%), Postives = 67/85 (78.82%), Query Frame = 1


Query: 8  IVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAE 67
          ++ AK+   RS++  + +     PKG+  VYVGE QKKR+++P+SYLNQPSFQ LLS++E
Sbjct: 7  LLGAKKILSRSTTAASAA-----PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSE 66

Query: 68 EEFGYDHPMGGITIPCSEDLFLDLT 93
          EEFG+DHPMGG+TIPC ED F+++T
Sbjct: 67 EEFGFDHPMGGLTIPCPEDTFINVT 86

[Close]

BLAST of CmoCh19G007230 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 45/62 (72.58%), Postives = 56/62 (90.32%), Query Frame = 1


Query: 31 PKGYFTVYVGEVQKKRFVIPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCSEDLFLD 90
          PKG+  VYVGE QKKR+++PLSYLNQPSFQ LLS++EEEFG+DHPMGG+TIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 91 LT 93
          +T
Sbjct: 85 VT 86

[Close]

BLAST of CmoCh19G007230 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 48/92 (52.17%), Postives = 70/92 (76.09%), Query Frame = 1


Query: 1  MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEV-QKKRFVIPLSYLNQPSF 60
          M  R+ R++ + +   +S S  + S+ V +PKG+  VYVGE+ QK+RFV+P++YL+ P F
Sbjct: 1  MAIRISRVLQSSKQLLKSLS--HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCF 60

Query: 61 QDLLSQAEEEFGYDHPMGGITIPCSEDLFLDL 92
          Q LL +AEEEFG+DHPMGG+TIPC+E +F+DL
Sbjct: 61 QKLLRKAEEEFGFDHPMGGLTIPCTEQIFIDL 90

[Close]

BLAST of CmoCh19G007230 vs. NCBI nr
Match: gi|645263117|ref|XP_008237081.1| (PREDICTED: uncharacterized protein LOC103335826 [Prunus mume])

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-61
Identity = 135/207 (65.22%), Postives = 147/207 (71.01%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           MGFR P I+   Q F   S        +DVPKGYF VYVGE  KKRFVIP+SYLNQ SFQ
Sbjct: 1   MGFRWPSII---QIFNTKS--------LDVPKGYFAVYVGE-SKKRFVIPVSYLNQSSFQ 60

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRIVH 120
           DLLS AEEEFGYDHPMG ITIPCSED FLDLT    +L      L  +  MGFRLP IVH
Sbjct: 61  DLLSLAEEEFGYDHPMGIITIPCSEDAFLDLTSGLILL------LRNFKTMGFRLPGIVH 120

Query: 121 AKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQAEE 180
           AKK         N   SK++DVP GYF VYVGE +KKRFVIP+SYLNQPSFQDLL++AE+
Sbjct: 121 AKK---------NKVPSKSLDVPNGYFAVYVGEGEKKRFVIPVSYLNQPSFQDLLTRAED 179

Query: 181 EFGYDHPMGGITIPCSEEEFLLDLTRS 208
           EFGYDHPMG ITIPCSE  F  DLT S
Sbjct: 181 EFGYDHPMGAITIPCSENTF-PDLTSS 179

[Close]

BLAST of CmoCh19G007230 vs. NCBI nr
Match: gi|802707896|ref|XP_012084404.1| (PREDICTED: uncharacterized protein LOC105643801 [Jatropha curcas])

HSP 1 Score: 244.6 bits (623), Expect = 1.6e-61
Identity = 124/211 (58.77%), Postives = 151/211 (71.56%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           MG RLP I++ K+  R    +     T DVPKG+F VYVGE QKKRF IP+SYL  PSFQ
Sbjct: 1   MGIRLPSIIYTKKIARWIFLS---QETTDVPKGHFAVYVGETQKKRFTIPISYLKNPSFQ 60

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRIVH 120
           +LLSQ EEEFG+DHPMGG+TIPCSE +F  L     +L   H        MGFRLP I+ 
Sbjct: 61  NLLSQVEEEFGFDHPMGGLTIPCSEQVFTHLIFRIFLLVHPHRV------MGFRLPAIIR 120

Query: 121 AKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQAEE 180
           AK+ LQRS S+ +  SS  +DVPKGY  VYVG+ Q KRF+IP+S+LNQPSFQ+LLSQAEE
Sbjct: 121 AKQILQRSPSTRSQTSSGVMDVPKGYLAVYVGKNQMKRFIIPVSFLNQPSFQELLSQAEE 180

Query: 181 EFGYDHPMGGITIPCSEEEFLLDLTRSLNDS 212
           +FGYDHPMGG+TIPC++  F +D+   LN S
Sbjct: 181 KFGYDHPMGGLTIPCTKSRF-IDVISCLNQS 201

[Close]

BLAST of CmoCh19G007230 vs. NCBI nr
Match: gi|955314681|ref|XP_003523506.2| (PREDICTED: uncharacterized protein LOC100797800 [Glycine max])

HSP 1 Score: 244.2 bits (622), Expect = 2.0e-61
Identity = 119/201 (59.20%), Postives = 155/201 (77.11%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           M  RLP ++ AK  FRRS++    ++++DVPKG+F VYVGE +KKRFVIP+SYLNQPSFQ
Sbjct: 1   MAIRLPCVLSAKHIFRRSNAA---ATSLDVPKGHFAVYVGEGEKKRFVIPVSYLNQPSFQ 60

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRIVH 120
           +LLS AEEEFG+ HPMGG+TIPC+ED+FL++T        S + L     M  RLP ++ 
Sbjct: 61  ELLSIAEEEFGFSHPMGGLTIPCTEDIFLNIT--------SALLLTNTSVMAIRLPSVLS 120

Query: 121 AKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQAEE 180
           AK  L+RS+   N A++ ++DVPKG+F VYVGE +K+R+VIP+SYLNQPSFQ+LLS AEE
Sbjct: 121 AKYILRRSNLFANHAATTSLDVPKGHFAVYVGEGEKRRYVIPVSYLNQPSFQELLSIAEE 180

Query: 181 EFGYDHPMGGITIPCSEEEFL 202
           EFG+ HPMGG+ IPC+EE FL
Sbjct: 181 EFGFSHPMGGLIIPCTEENFL 190

[Close]

BLAST of CmoCh19G007230 vs. NCBI nr
Match: gi|731387410|ref|XP_002271660.2| (PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera])

HSP 1 Score: 242.3 bits (617), Expect = 7.8e-61
Identity = 123/220 (55.91%), Postives = 154/220 (70.00%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQ-----SFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLN 60
           MGFR+P I+HAKQ     S    S     ++T  VPKG+F VYVGE +KKRFV+P+SYLN
Sbjct: 1   MGFRMPSILHAKQILKLQSLLTRSQLSISATTAVVPKGHFAVYVGEAEKKRFVVPISYLN 60

Query: 61  QPSFQDLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYC-NMGFR 120
            PSFQ  LS +EEEFG++HPMGG+TIPC E+ F+DLT      + +H  L +    MGFR
Sbjct: 61  NPSFQKFLSHSEEEFGFNHPMGGVTIPCKEESFIDLTS-----RLNHCLLSSQSKTMGFR 120

Query: 121 LPRIVHAKKSLQRSSSSGNGASS---KAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSF 180
            P I+ AK+ L+  S    G SS    A +VPKG+F VYVGEA+KKRFV+P+SYLN PSF
Sbjct: 121 FPSIIQAKQILKLHSLLSRGQSSISATAAEVPKGHFAVYVGEAEKKRFVVPISYLNNPSF 180

Query: 181 QDLLSQAEEEFGYDHPMGGITIPCSEEEFLLDLTRSLNDS 212
           Q LLS AEEEFG++HPMGG+TIPC E+ F ++LT   N S
Sbjct: 181 QKLLSHAEEEFGFNHPMGGVTIPCKEDAF-INLTSRFNSS 214

[Close]

BLAST of CmoCh19G007230 vs. NCBI nr
Match: gi|976914218|gb|KVI00448.1| (Auxin responsive SAUR protein [Cynara cardunculus var. scolymus])

HSP 1 Score: 240.7 bits (613), Expect = 2.3e-60
Identity = 118/208 (56.73%), Postives = 157/208 (75.48%), Query Frame = 1


Query: 1   MGFRLPRIVHAKQSFRRSSSTGNGSSTVDVPKGYFTVYVGEVQKKRFVIPLSYLNQPSFQ 60
           M   +PRI+ AKQ  RRS S G+ ++ + +PKGYF VYVGE +KKRFV+P+S L+QP+FQ
Sbjct: 83  MAILMPRIIQAKQILRRSLSNGSSNTYMAIPKGYFAVYVGEQEKKRFVVPVSLLSQPAFQ 142

Query: 61  DLLSQAEEEFGYDHPMGGITIPCSEDLFLDLTRSPDVLQKSHIYLGTYCNMGFRLPRIVH 120
           +LL+QAEEEFGY+HPMGG+TIPCSED+F DL     +L+           M   +P+I+ 
Sbjct: 143 ELLNQAEEEFGYNHPMGGLTIPCSEDIFTDLASHCALLR----------TMAILMPQIIQ 202

Query: 121 AKKSLQRSSSSGNGASSKAVDVPKGYFTVYVGEAQKKRFVIPLSYLNQPSFQDLLSQAEE 180
           AK+ L+RS S  NG+S+  + +PKG+F VYVGE +KKRFV+P+S L+QP+FQ+LL +AEE
Sbjct: 203 AKQILRRSLS--NGSSNTYMVIPKGHFAVYVGEQEKKRFVVPVSLLSQPAFQELLYRAEE 262

Query: 181 EFGYDHPMGGITIPCSEEEFLLDLTRSL 209
           EFGY+HPMGG+TIPCSE+ F  DLT  L
Sbjct: 263 EFGYNHPMGGLTIPCSEDIF-TDLTSRL 277

The following BLAST results are available for this feature:

BLAST of CmoCh19G007230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AX10A_SOYBN	1.7e-28	65.00	Auxin-induced protein X10A OS=Glycine max PE=2 SV=1	[more]
A10A5_SOYBN	2.8e-26	63.00	Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1	[more]
ARG7_VIGRR	6.2e-26	67.78	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
AX6B_SOYBN	6.2e-26	68.89	Auxin-induced protein 6B OS=Glycine max PE=2 SV=1	[more]
AX15A_SOYBN	1.1e-25	66.30	Auxin-induced protein 15A OS=Glycine max PE=2 SV=1	[more]

BLAST of CmoCh19G007230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A118K004_CYNCS	1.6e-60	56.73	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021304...	[more]
A0A103Y0W3_CYNCS	1.0e-59	53.39	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021301...	[more]
A0A103Y0U0_CYNCS	1.3e-59	57.50	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021302...	[more]
A0A118K2C1_CYNCS	5.1e-59	58.50	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_017564...	[more]
A0A061E6C6_THECC	1.2e-55	55.19	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006746 PE=4 ...	[more]

BLAST of CmoCh19G007230 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.7e-29	59.57	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.2e-24	66.67	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	6.2e-24	56.47	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	1.4e-23	72.58	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.4e-23	52.17	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh19G007230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|645263117\|ref\|XP_008237081.1\|	1.6e-61	65.22	PREDICTED: uncharacterized protein LOC103335826 [Prunus mume]	[more]
gi\|802707896\|ref\|XP_012084404.1\|	1.6e-61	58.77	PREDICTED: uncharacterized protein LOC105643801 [Jatropha curcas]	[more]
gi\|955314681\|ref\|XP_003523506.2\|	2.0e-61	59.20	PREDICTED: uncharacterized protein LOC100797800 [Glycine max]	[more]
gi\|731387410\|ref\|XP_002271660.2\|	7.8e-61	55.91	PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera]	[more]
gi\|976914218\|gb\|KVI00448.1\|	2.3e-60	56.73	Auxin responsive SAUR protein [Cynara cardunculus var. scolymus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G007230.1	CmoCh19G007230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 12..92 score: 3.8E-25coord: 124..200 score: 4.3
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 111..211 score: 3.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G007230	CmaCh20G007860	Cucurbita maxima (Rimu)	cmacmoB548
CmoCh19G007230	Cla015865	Watermelon (97103) v1	cmowmB496
CmoCh19G007230	Csa7G009000	Cucumber (Chinese Long) v2	cmocuB518
CmoCh19G007230	CSPI07G00610	Wild cucumber (PI 183967)	cmocpiB524
CmoCh19G007230	CSPI02G13020	Wild cucumber (PI 183967)	cmocpiB500
CmoCh19G007230	Lsi10G004430	Bottle gourd (USVL1VR-Ls)	cmolsiB451
CmoCh19G007230	Cla97C11G210440	Watermelon (97103) v2	cmowmbB506

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh19G007230	CmoCh20G007980	Cucurbita moschata (Rifu)	cmocmoB382
CmoCh19G007230	CmoCh02G003400	Cucurbita moschata (Rifu)	cmocmoB388

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G007230	Silver-seed gourd	carcmoB0433
CmoCh19G007230	Silver-seed gourd	carcmoB1316
CmoCh19G007230	Cucumber (Chinese Long) v3	cmocucB0594
CmoCh19G007230	Cucumber (Chinese Long) v3	cmocucB0622
CmoCh19G007230	Watermelon (97103) v2	cmowmbB512
CmoCh19G007230	Wax gourd	cmowgoB0653
CmoCh19G007230	Wax gourd	cmowgoB0665
CmoCh19G007230	Cucurbita moschata (Rifu)	cmocmoB108
CmoCh19G007230	Cucumber (Gy14) v1	cgycmoB1050
CmoCh19G007230	Cucurbita maxima (Rimu)	cmacmoB145
CmoCh19G007230	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G007230	Cucurbita maxima (Rimu)	cmacmoB599
CmoCh19G007230	Melon (DHL92) v3.5.1	cmomeB453
CmoCh19G007230	Watermelon (Charleston Gray)	cmowcgB459
CmoCh19G007230	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G007230	Cucurbita pepo (Zucchini)	cmocpeB484
CmoCh19G007230	Cucurbita pepo (Zucchini)	cmocpeB492
CmoCh19G007230	Cucurbita pepo (Zucchini)	cmocpeB499
CmoCh19G007230	Bottle gourd (USVL1VR-Ls)	cmolsiB457
CmoCh19G007230	Cucumber (Gy14) v2	cgybcmoB202
CmoCh19G007230	Cucumber (Gy14) v2	cgybcmoB205
CmoCh19G007230	Cucumber (Gy14) v2	cgybcmoB927
CmoCh19G007230	Melon (DHL92) v3.6.1	cmomedB512
CmoCh19G007230	Melon (DHL92) v3.6.1	cmomedB522
CmoCh19G007230	Melon (DHL92) v3.6.1	cmomedB527