CmaCh20G007860 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh20G007860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr20 : 3707113 .. 3709247 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATTCGTCTACCTTCTCTTCTCTTTAGTGCCAAACAAATTCTGAAGACACAGTCAGTATCTGTACAAGGTCAATCCAACGTACCCAAAGGTCACATTGCAGTATACGTGGGAGAAATTCAGAGGAAGCGGTTTTTGGTTCCAATATCTTACTTGAACCATCCTTCATTTGTAAATTTGCTCAGTAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACAGGAGGTTTGACCATTCCCTGCAATGAAGAAGCCTTCATAGATGTCACCTCCAGACTGTATACTTCATAAAAGATTGAAAAAAAAAAAAAGAGCAATCCAACTTGCAGTTTTGACCACTTTTCTTTTCATTTTCTGTCTATAGAAGGTAGAGTTGAATGTCAATGTAAAGGGAATCTTTATATGTAGATGATTAGATAAGAAAAGGTGGAACGAAGCCACTTGAACATCAATGACAAATATCAGTTGCAATGAGAGTGACCATTTTGTAGAAGAAAAAAACCTGATTTGATAAATTAGAGGTATAAAACTTTCAGTTTCCTATATAAGCAAGCAAGAATCTTTGTCAACTGAAACTTTTGATTCGTAAGTTAAATTTATTTATATCACATTTTCTATGTGTCAATAATATGCAAGCCTTTCCTTAATGTCCGGATAAAAGTAAAAGGAAGAAACTAATCACTATATTAAGAGTTAGTCTAGTATATAGAACAAAACAAAACCAATTAACAATGTAAAAGTAGATGCTTCCCAAGTCAACCAAATGTCTTAATATTATGCAGAGAAATTGTTGAGGTGGTTTATGAATTGGGGTTCCTCCGATGTATTACTTCTATGATAGTCATTTTTTGATGCTCAAAGAGTATGTCCAGGACCAGACACATGTTAAAGAAGCAAATCTTCAAATTACAACACTAACTCTAGTATGACCCTTCAGATTTTTTAATGGTAGAAGAAGACAGTATTACCAGACAGTATTACCCTTCAGATTTTTTAACACAAGATCGTGCAGATGTAACATACTTACATGTAGAAAAACTGATATTGATTTTAATGCTGCGGTTCTCAGTGATCGACTGTGTGCCGGAAGTATTGCAATCTCTGTAAAAAAAAAAAAGGTGGTGATATCATAGTCATGAGCTGCCTGAAGTGGATGCAATGTAACTGACTCTATATGACAAACAACGTGTTAATTAGTATCTCATTCCAATTCACATGATTCACAGATGTCGAAAACTCAATTTACTAGACAAGGACTGAGAAATCTGATGATGAGAACTAAGATGTAGTTCAATAGATAATTTGATGCTTATGCCATTTTTTGGTTCTTTCTCAACCTATACATCAACTTCAATGACACAGCAATGGGAACTTCCATAAAAAAGGCAATCCAGTCACAAGGGTATTATATTCTTCCATTTTCAATGCCATTACTCTATCTTGAATCATTTAATTTGATGCAGCAGCTACGTGCTTGGACAATGGCATGTGATGAATGGAGCAATTTGGCCAACGAAACAATTCTTTTTTATTCAAACAAAAGTATATCACAGAATATTTGTGGAGGGAAAGGAAGAGATAATAGGATCAGCTTTTACTTGTTAGGCAAAGCCATGTGGAAGGTTCTACTCAAATACCCACCAACCACCAGACTCCAATACCCCACTTAGAAATTGGATAAGCACCACTGACCTGCATAGCTCTTTCGTCATAACTCTATAAATATAAACATAATACGAGGCTCAAACACCAAATTCAACCGTGACTTCCTCTTCTAGTTGGTTTTATACTATTCCGATCAAAACTACAGATCTTTCTCTATCTTTCATCTCAAACAAATGGGGATTGGATTGCTATCTTTAATTCCTCGTGCCAAGCAAATCTTGAAGATGCAGCCAGGTTTTACCAAAAACCAGCTGGATGTTCCAAAAGGCCATGTGGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTTGTGGTTCCAATATCTTACTTAAACCAACCATTGTTCCAGCAACTACTCAGGCACGCAGAGGAGGAATTTGGCTTCCATCATCCACAAGGGAGCCTGACAATTCCTTGCAAAGAAGATGCCTTCATCGAACTCACTTCTAGATTGCAAGCATTTTGA

mRNA sequence

ATGGGAATTCGTCTACCTTCTCTTCTCTTTAGTGCCAAACAAATTCTGAAGACACAGTCAGTATCTGTACAAGGTCAATCCAACGTACCCAAAGGTCACATTGCAGTATACGTGGGAGAAATTCAGAGGAAGCGGTTTTTGGTTCCAATATCTTACTTGAACCATCCTTCATTTGTAAATTTGCTCAGTAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACAGGAGGTTTGACCATTCCCTGCAATGAAGAAGCCTTCATAGATGTCACCTCCAGACTATCTTTCTCTATCTTTCATCTCAAACAAATGGGGATTGGATTGCTATCTTTAATTCCTCGTGCCAAGCAAATCTTGAAGATGCAGCCAGGTTTTACCAAAAACCAGCTGGATGTTCCAAAAGGCCATGTGGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTTGTGGTTCCAATATCTTACTTAAACCAACCATTGTTCCAGCAACTACTCAGGCACGCAGAGGAGGAATTTGGCTTCCATCATCCACAAGGGAGCCTGACAATTCCTTGCAAAGAAGATGCCTTCATCGAACTCACTTCTAGATTGCAAGCATTTTGA

Coding sequence (CDS)

ATGGGAATTCGTCTACCTTCTCTTCTCTTTAGTGCCAAACAAATTCTGAAGACACAGTCAGTATCTGTACAAGGTCAATCCAACGTACCCAAAGGTCACATTGCAGTATACGTGGGAGAAATTCAGAGGAAGCGGTTTTTGGTTCCAATATCTTACTTGAACCATCCTTCATTTGTAAATTTGCTCAGTAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACAGGAGGTTTGACCATTCCCTGCAATGAAGAAGCCTTCATAGATGTCACCTCCAGACTATCTTTCTCTATCTTTCATCTCAAACAAATGGGGATTGGATTGCTATCTTTAATTCCTCGTGCCAAGCAAATCTTGAAGATGCAGCCAGGTTTTACCAAAAACCAGCTGGATGTTCCAAAAGGCCATGTGGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTTGTGGTTCCAATATCTTACTTAAACCAACCATTGTTCCAGCAACTACTCAGGCACGCAGAGGAGGAATTTGGCTTCCATCATCCACAAGGGAGCCTGACAATTCCTTGCAAAGAAGATGCCTTCATCGAACTCACTTCTAGATTGCAAGCATTTTGA

Protein sequence

MGIRLPSLLFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFHLKQMGIGLLSLIPRAKQILKMQPGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEEEFGFHHPQGSLTIPCKEDAFIELTSRLQAF

Homology

[Close]

BLAST of CmaCh20G007860 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 4.2e-24
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 1


Query: 9  LFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          L  AK+IL   + +V   S  PKG +AVYVGE Q+KR+LVP+SYLN PSF  LLS++E+E
Sbjct: 7  LLGAKKILSRSTAAV---SAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFNHPTGGLTIPCNEEAFIDVTSRL 95
          FGF+HP GGLTIPC+E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007860 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 55/86 (63.95%), Postives = 67/86 (77.91%), Query Frame = 1


Query: 9  LFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          L  AK+IL   + +V   S  PKG +AVYVGE Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLVAKKILSRSAAAV---SAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPTGGLTIPCNEEAFIDVTSRL 95
          FGF+HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007860 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          L  AK+IL   S S    S  PKG +AVYVGE Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPTGGLTIPCNEEAFIDVTSRL 95
          FGF+HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007860 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.6e-23
Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          L  AK+IL   S S    S  PKG +AVYVGE Q+KR+LVPISYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKIL---SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPTGGLTIPCNEEAFIDVTSR 94
          FGF+HP GGLTIPC E+ FI+VTSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmaCh20G007860 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.9e-23
Identity = 53/86 (61.63%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          L  AK+IL   + S       PKG +AVYVGE Q+KR+LVP+SYL+ PSF  LLS++EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFNHPTGGLTIPCNEEAFIDVTSRL 95
          FGF+HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmaCh20G007860 vs. TrEMBL
Match: A0A103Y7U2_CYNCS (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_017573 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.7e-52
Identity = 112/213 (52.58%), Postives = 143/213 (67.14%), Query Frame = 1


Query: 8   LLFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEE 67
           L F  K   K QS+  + Q +VPKG++A+YVGE Q+ RF+VP+S+L HP F +LL + E+
Sbjct: 13  LQFVLKHFSKLQSLCNRNQWDVPKGYLAIYVGEKQKTRFVVPVSFLTHPQFQDLLRQTED 72

Query: 68  EFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFHL-----------------KQMGIGLL- 127
           EFG+NH  GGLTI C E+AF D+TS+L  S +++                 + + +GL+ 
Sbjct: 73  EFGYNHSMGGLTIHCQEDAFADLTSKLPISCYNMLYRIFPSNLTTGKRVCDRFLDMGLVR 132

Query: 128 --SLIPRAKQILKMQP-GFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLR 187
             SLI  A+   K+      K Q DVPKGH+AVYVGEIQ +RFVVPISYL+QPLFQ LLR
Sbjct: 133 LPSLIANARCFSKVNSLRSRKYQSDVPKGHLAVYVGEIQKRRFVVPISYLDQPLFQDLLR 192

Query: 188 HAEEEFGFHHPQGSLTIPCKEDAFIELTSRLQA 200
           HAEEE GF HP G LTI C EDAF+ELT+RL A
Sbjct: 193 HAEEELGFDHPMGGLTICCHEDAFVELTARLHA 225

[Close]

BLAST of CmaCh20G007860 vs. TrEMBL
Match: A0A061E6C6_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006746 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.9e-50
Identity = 114/207 (55.07%), Postives = 141/207 (68.12%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSV----SVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHP 60
           M IR+P ++  AKQIL+   +    +V   ++VP+G  AVYVGE Q++RF+VP S LN P
Sbjct: 1   MAIRVPRIMH-AKQILRQSKLFANQAVSTSTDVPEGFFAVYVGEGQKERFVVPTSVLNQP 60

Query: 61  SFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFHLKQMGIGLLSLIPRAK 120
           SF  LLS AEEEFGFNHP GGLTIPC EE FID+TSRLS+     K M    L     AK
Sbjct: 61  SFQKLLSIAEEEFGFNHPMGGLTIPCREEVFIDLTSRLSWLTRTRKAMATRFL-----AK 120

Query: 121 QILK------MQPGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEE 180
           QIL+       +   T  ++ VPKG +AVYVGE Q KRFVVP+++LNQP FQ LL  +EE
Sbjct: 121 QILRRSVFAASKAASTTGEV-VPKGFLAVYVGETQKKRFVVPVTFLNQPSFQALLSKSEE 180

Query: 181 EFGFHHPQGSLTIPCKEDAFIELTSRL 198
           EFGF HP G LTIPC+E+ FI +TS+L
Sbjct: 181 EFGFDHPMGGLTIPCREETFINVTSQL 200

[Close]

BLAST of CmaCh20G007860 vs. TrEMBL
Match: A0A118K004_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021304 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-49
Identity = 111/205 (54.15%), Postives = 147/205 (71.71%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSVSVQGQSN----VPKGHIAVYVGEIQRKRFLVPISYLNHP 60
           M I +P ++  AKQIL+ +S+S  G SN    +PKG+ AVYVGE ++KRF+VP+S L+ P
Sbjct: 83  MAILMPRII-QAKQILR-RSLS-NGSSNTYMAIPKGYFAVYVGEQEKKRFVVPVSLLSQP 142

Query: 61  SFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFHLKQMGIGLLSLIPRAK 120
           +F  LL++AEEEFG+NHP GGLTIPC+E+ F D+ S  +     L+ M I L+  I +AK
Sbjct: 143 AFQELLNQAEEEFGYNHPMGGLTIPCSEDIFTDLASHCAL----LRTMAI-LMPQIIQAK 202

Query: 121 QILK--MQPGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEEEFGF 180
           QIL+  +  G +   + +PKGH AVYVGE + KRFVVP+S L+QP FQ+LL  AEEEFG+
Sbjct: 203 QILRRSLSNGSSNTYMVIPKGHFAVYVGEQEKKRFVVPVSLLSQPAFQELLYRAEEEFGY 262

Query: 181 HHPQGSLTIPCKEDAFIELTSRLQA 200
           +HP G LTIPC ED F +LTSRL A
Sbjct: 263 NHPMGGLTIPCSEDIFTDLTSRLGA 279

[Close]

BLAST of CmaCh20G007860 vs. TrEMBL
Match: A0A103Y0U0_CYNCS (Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021302 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 3.8e-48
Identity = 110/207 (53.14%), Postives = 144/207 (69.57%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSVSVQGQSN----VPKGHIAVYVGEIQRKRFLVPISYLNHP 60
           M I +P ++  AKQIL+ +S+S  G SN    VPKGH AVYVGE ++KRF+VP+S L+ P
Sbjct: 1   MAILMPRII-QAKQILR-RSLS-NGSSNTYMAVPKGHFAVYVGEQEKKRFVVPVSLLSQP 60

Query: 61  SFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRL--SFSIFHLKQMGIGLLSLIPR 120
           +F  LL RAEEEFG+NHP GGLT+PC+E+ F D+ S          L+ M I L+  I +
Sbjct: 61  AFQELLYRAEEEFGYNHPMGGLTVPCSEDIFTDLASPFLNKADCALLRTMAI-LMPRIIQ 120

Query: 121 AKQILK--MQPGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEEEF 180
           AKQIL+  +  G +   + +PKGH AVYVGE + KRFVVP+S L+QP FQ+LL  A++EF
Sbjct: 121 AKQILRRSLSNGSSNKYMVIPKGHFAVYVGEQEKKRFVVPVSLLSQPAFQELLYRADDEF 180

Query: 181 GFHHPQGSLTIPCKEDAFIELTSRLQA 200
           G++HP G LTIPC ED F +L SRL A
Sbjct: 181 GYNHPMGGLTIPCSEDIFTDLASRLGA 203

[Close]

BLAST of CmaCh20G007860 vs. TrEMBL
Match: A0A061DYH2_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006747 PE=4 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 8.5e-48
Identity = 105/183 (57.38%), Postives = 129/183 (70.49%), Query Frame = 1


Query: 23  VQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEEFGFNHPTGGLTIPC 82
           V G   VPKG+ AVYVGE Q KRF++P+S+LN PSF +LLS +EEEFG++HPTGGL IPC
Sbjct: 8   VVGAKKVPKGYFAVYVGENQ-KRFVIPVSFLNRPSFQDLLSLSEEEFGYSHPTGGLRIPC 67

Query: 83  NEEAFIDVTSRL-------SFSIFHLKQMGIGLLSLIPRAKQILKMQPGFTKNQLDVPKG 142
           +E+ F+DVTSRL          +  ++  G      I R  ++   Q   T +  DVPKG
Sbjct: 68  DEDIFLDVTSRLFSKTKIMEGELTGVRGGGSSNNGKILRQSKLFANQAASTSS--DVPKG 127

Query: 143 HVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEEEFGFHHPQGSLTIPCKEDAFIELTS 199
            VAVYVGE Q KRFVVPIS LNQP FQ+LL  AEEEFGF+HP G LTIPC+E+ FI+LTS
Sbjct: 128 FVAVYVGESQKKRFVVPISVLNQPSFQKLLSIAEEEFGFNHPMGGLTIPCREEVFIDLTS 187

[Close]

BLAST of CmaCh20G007860 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 5.7e-27
Identity = 58/98 (59.18%), Postives = 77/98 (78.57%), Query Frame = 1


Query: 1  MGIRLPSLLFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEI-QRKRFLVPISYLNHPSFV 60
          M IR+  +L S+KQ+LK+ S S    + +PKGH+AVYVGE+ Q++RF+VP++YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNNVA-IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 NLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFS 98
           LL +AEEEFGF+HP GGLTIPC E+ FID+ SRLS S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmaCh20G007860 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 5.7e-27
Identity = 58/99 (58.59%), Postives = 74/99 (74.75%), Query Frame = 1


Query: 1  MGIRLPSLLFSAKQILKT----QSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHP 60
          M IR+P +L S+KQIL+      S S     +VPKG++AVYVGE   KRF+VP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLS 96
          SF +LL +AEEEFGF+HP GGLTIPC+EE FID+ SR +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmaCh20G007860 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26
Identity = 60/104 (57.69%), Postives = 74/104 (71.15%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSV------SVQGQSNVPKGHIAVYVGE---IQRKRFLVPIS 60
           MG+   ++  + KQILK  S+      S     +VPKGH+AVYVGE   +++KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFID-VTSRL 95
           +LNHPSF   LSRAEEEFGFNHP GGLTIPC EE F+D + SRL
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRL 104

[Close]

BLAST of CmaCh20G007860 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 54/86 (62.79%), Postives = 68/86 (79.07%), Query Frame = 1


Query: 9  LFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          L  AK+IL   + +V   S  PKG +AVYVGE Q+KR+LVP+SYLN PSF  LLS++E+E
Sbjct: 7  LLGAKKILSRSTAAV---SAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFNHPTGGLTIPCNEEAFIDVTSRL 95
          FGF+HP GGLTIPC+E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007860 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 6.9e-25
Identity = 56/86 (65.12%), Postives = 66/86 (76.74%), Query Frame = 1


Query: 9  LFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVNLLSRAEEE 68
          L  AK+IL   S S    S  PKG +AVYVGE Q+KR+LVP+SYLN PSF  LLS++EEE
Sbjct: 7  LLGAKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFNHPTGGLTIPCNEEAFIDVTSRL 95
          FGF+HP GGLTIPC E+ FI+VTSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh20G007860 vs. NCBI nr
Match: gi|731387429|ref|XP_002271861.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100249577 [Vitis vinifera])

HSP 1 Score: 259.6 bits (662), Expect = 4.5e-66
Identity = 128/199 (64.32%), Postives = 162/199 (81.41%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVN 60
           MGIRLPS++  AKQILK QS+  + ++ VPKGH AVYVGE+Q+KR++VP+SYLNHPSF +
Sbjct: 1   MGIRLPSMV-QAKQILKLQSLLSRNRTEVPKGHFAVYVGEVQKKRYVVPLSYLNHPSFRS 60

Query: 61  LLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFHLKQMGIGLLSLIPRAKQILK 120
           LL +AEEEFGF HP GGLTIPC++ AFID+TS+L+ S    + MGI L S++ +AKQILK
Sbjct: 61  LLHQAEEEFGFTHPMGGLTIPCHKNAFIDLTSQLNASXEEQRIMGIRLPSVV-QAKQILK 120

Query: 121 MQPGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEEEFGFHHPQGS 180
           +Q   ++N+ +VPKGH AVYVGE++ KR+VVPISYLN P F+ LL  AEEEFGF+HP G 
Sbjct: 121 LQLLLSRNRAEVPKGHFAVYVGEVEKKRYVVPISYLNHPSFRSLLCQAEEEFGFNHPMGG 180

Query: 181 LTIPCKEDAFIELTSRLQA 200
           LTIPCKE AF++L SRLQA
Sbjct: 181 LTIPCKEHAFLDLASRLQA 197

[Close]

BLAST of CmaCh20G007860 vs. NCBI nr
Match: gi|731387422|ref|XP_002271994.2| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100256454 [Vitis vinifera])

HSP 1 Score: 248.4 bits (633), Expect = 1.0e-62
Identity = 127/198 (64.14%), Postives = 156/198 (78.79%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSVSVQGQSNVPKGHIAVYVGEIQRKRFLVPISYLNHPSFVN 60
           MGIRLPS++  AKQI K QS   + Q+ VPKG+ AVYVGE++++R +VPISYLNHPSF +
Sbjct: 1   MGIRLPSMV-QAKQIFKLQSYLSRNQAEVPKGYFAVYVGEVEKRRHVVPISYLNHPSFRS 60

Query: 61  LLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFH-LKQMGIGLLSLIPRAKQIL 120
           LL +AEEEFGFNHP GGLTIPCNE+AF D+T+RL+ S     K MGI   S++ +AKQIL
Sbjct: 61  LLCQAEEEFGFNHPMGGLTIPCNEDAFADLTTRLNASXGKGRKIMGIRFPSMV-QAKQIL 120

Query: 121 KMQPGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEEEFGFHHPQG 180
           K+Q   ++NQ +V KGH AVYVGE++ KRFVVPISYLN P F+ LL  AEEE+ F HP G
Sbjct: 121 KLQSLLSRNQAEVHKGHFAVYVGEVEKKRFVVPISYLNHPSFRSLLYQAEEEYRFKHPMG 180

Query: 181 SLTIPCKEDAFIELTSRL 198
           SLTIPC EDAFI+LTS+L
Sbjct: 181 SLTIPCNEDAFIDLTSQL 196

[Close]

BLAST of CmaCh20G007860 vs. NCBI nr
Match: gi|731387410|ref|XP_002271660.2| (PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera])

HSP 1 Score: 243.4 bits (620), Expect = 3.3e-61
Identity = 129/215 (60.00%), Postives = 155/215 (72.09%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSVSVQGQSN-------VPKGHIAVYVGEIQRKRFLVPISYL 60
           MG R+PS+L  AKQILK QS+  + Q +       VPKGH AVYVGE ++KRF+VPISYL
Sbjct: 1   MGFRMPSILH-AKQILKLQSLLTRSQLSISATTAVVPKGHFAVYVGEAEKKRFVVPISYL 60

Query: 61  NHPSFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIF--HLKQMGIGLLSL 120
           N+PSF   LS +EEEFGFNHP GG+TIPC EE+FID+TSRL+  +     K MG    S+
Sbjct: 61  NNPSFQKFLSHSEEEFGFNHPMGGVTIPCKEESFIDLTSRLNHCLLSSQSKTMGFRFPSI 120

Query: 121 IPRAKQILKMQPGFTKNQ-------LDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQL 180
           I +AKQILK+    ++ Q        +VPKGH AVYVGE + KRFVVPISYLN P FQ+L
Sbjct: 121 I-QAKQILKLHSLLSRGQSSISATAAEVPKGHFAVYVGEAEKKRFVVPISYLNNPSFQKL 180

Query: 181 LRHAEEEFGFHHPQGSLTIPCKEDAFIELTSRLQA 200
           L HAEEEFGF+HP G +TIPCKEDAFI LTSR  +
Sbjct: 181 LSHAEEEFGFNHPMGGVTIPCKEDAFINLTSRFNS 213

[Close]

BLAST of CmaCh20G007860 vs. NCBI nr
Match: gi|731387405|ref|XP_010649235.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100246251 [Vitis vinifera])

HSP 1 Score: 235.7 bits (600), Expect = 6.9e-59
Identity = 125/213 (58.69%), Postives = 153/213 (71.83%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSVSVQGQ-------SNVPKGHIAVYVGEIQRKRFLVPISYL 60
           MGI LPS++  AKQILK   +  + Q       S VPKGH  VYVGE QRKRF+VPISY 
Sbjct: 1   MGIHLPSIV-QAKQILKVDPLLTRSQLSISTKASEVPKGHFVVYVGEAQRKRFVVPISYR 60

Query: 61  NHPSFVNLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFHLKQMGIGLLSLIP 120
           N+PSF+  LS AEEEFGF HP GG+TI CNE AFID+TS +SF     ++  + + S++ 
Sbjct: 61  NNPSFLKXLSHAEEEFGFKHPMGGVTILCNEGAFIDITSLISFQ----RRRWVCMPSIL- 120

Query: 121 RAKQILKMQPGFTKNQL-------DVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLR 180
            AKQILK+Q   T++QL       +VPKGH AVYVGE + KRFVVPISYLN P FQ+LL 
Sbjct: 121 HAKQILKLQSLLTRSQLSVSSTTAEVPKGHFAVYVGETEKKRFVVPISYLNNPSFQKLLS 180

Query: 181 HAEEEFGFHHPQGSLTIPCKEDAFIELTSRLQA 200
           HAEEEFGF+HP G +TIPCKE++FI+LTS L +
Sbjct: 181 HAEEEFGFNHPMGGVTIPCKEESFIDLTSHLNS 207

[Close]

BLAST of CmaCh20G007860 vs. NCBI nr
Match: gi|720049302|ref|XP_010271401.1| (PREDICTED: uncharacterized protein LOC104607462 [Nelumbo nucifera])

HSP 1 Score: 223.8 bits (569), Expect = 2.7e-55
Identity = 118/205 (57.56%), Postives = 146/205 (71.22%), Query Frame = 1


Query: 1   MGIRLPSLLFSAKQILKTQSVSVQGQS-NVPKGHIAVYVGEIQRKRFLVPISYLNHPSFV 60
           MGIRLP ++  AK IL+   +S    + NVPKGH AVYVGE Q+KRF+VPISYL+HPSF 
Sbjct: 1   MGIRLPGIVH-AKAILRRSLISPSAPTANVPKGHFAVYVGEAQKKRFIVPISYLSHPSFQ 60

Query: 61  NLLSRAEEEFGFNHPTGGLTIPCNEEAFIDVTSRLSFSIFHLKQMGIGLLSLIPRAKQIL 120
           +LL +AEEEFGF+HP GGLTIPC E+ F+D+TSRL+++   L+ M + +  ++  AK+I 
Sbjct: 61  DLLGQAEEEFGFHHPMGGLTIPCKEDQFLDLTSRLNWNSRKLQLMAVRVPGMV-HAKEIF 120

Query: 121 K-------MQPGFTKNQLDVPKGHVAVYVGEIQMKRFVVPISYLNQPLFQQLLRHAEEEF 180
           K       + P  T    DVPKGH AVYVG  + KRF+VPISYLN P FQ LL  AEEEF
Sbjct: 121 KRSLLRRNLLPSAT--MTDVPKGHFAVYVGVNEKKRFIVPISYLNHPSFQDLLNKAEEEF 180

Query: 181 GFHHPQGSLTIPCKEDAFIELTSRL 198
           GF HP G LTIPCKE+ FI L S+L
Sbjct: 181 GFKHPTGGLTIPCKEETFIGLASQL 201

The following BLAST results are available for this feature:

BLAST of CmaCh20G007860 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU22_ARATH	4.2e-24	62.79	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	1.2e-23	63.95	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU24_ARATH	1.2e-23	65.12	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	1.6e-23	65.88	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU21_ARATH	7.9e-23	61.63	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of CmaCh20G007860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A103Y7U2_CYNCS	5.7e-52	52.58	Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_0...	[more]
A0A061E6C6_THECC	6.9e-50	55.07	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006746 PE=4 ...	[more]
A0A118K004_CYNCS	1.5e-49	54.15	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021304...	[more]
A0A103Y0U0_CYNCS	3.8e-48	53.14	Auxin responsive SAUR protein OS=Cynara cardunculus var. scolymus GN=Ccrd_021302...	[more]
A0A061DYH2_THECC	8.5e-48	57.38	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006747 PE=4 ...	[more]

BLAST of CmaCh20G007860 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	5.7e-27	59.18	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	5.7e-27	58.59	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	3.7e-26	57.69	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	2.4e-25	62.79	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	6.9e-25	65.12	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh20G007860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|731387429\|ref\|XP_002271861.2\|	4.5e-66	64.32	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100249577 [Vitis vini...	[more]
gi\|731387422\|ref\|XP_002271994.2\|	1.0e-62	64.14	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100256454 [Vitis vini...	[more]
gi\|731387410\|ref\|XP_002271660.2\|	3.3e-61	60.00	PREDICTED: uncharacterized protein LOC100252964 [Vitis vinifera]	[more]
gi\|731387405\|ref\|XP_010649235.1\|	6.9e-59	58.69	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC100246251 [Vitis vini...	[more]
gi\|720049302\|ref\|XP_010271401.1\|	2.7e-55	57.56	PREDICTED: uncharacterized protein LOC104607462 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G007860.1	CmaCh20G007860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 2.1E-25coord: 116..196 score: 7.0
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..98 score: 1.9
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..98 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh20G007860	Cla016625	Watermelon (97103) v1	cmawmB544
CmaCh20G007860	MELO3C020766	Melon (DHL92) v3.5.1	cmameB490
CmaCh20G007860	CSPI07G00610	Wild cucumber (PI 183967)	cmacpiB580
CmaCh20G007860	CmoCh19G007230	Cucurbita moschata (Rifu)	cmacmoB548
CmaCh20G007860	CmoCh20G007940	Cucurbita moschata (Rifu)	cmacmoB551
CmaCh20G007860	CmoCh02G003490	Cucurbita moschata (Rifu)	cmacmoB554
CmaCh20G007860	Lsi10G004430	Bottle gourd (USVL1VR-Ls)	cmalsiB507
CmaCh20G007860	MELO3C020767.2	Melon (DHL92) v3.6.1	cmamedB570
CmaCh20G007860	Cla97C11G210320	Watermelon (97103) v2	cmawmbB567

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh20G007860	CmaCh02G003400	Cucurbita maxima (Rimu)	cmacmaB469

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh20G007860	Watermelon (97103) v2	cmawmbB570
CmaCh20G007860	Wax gourd	cmawgoB0677
CmaCh20G007860	Wax gourd	cmawgoB0684
CmaCh20G007860	Cucurbita maxima (Rimu)	cmacmaB155
CmaCh20G007860	Cucurbita maxima (Rimu)	cmacmaB444
CmaCh20G007860	Cucumber (Gy14) v1	cgycmaB0479
CmaCh20G007860	Cucumber (Gy14) v1	cgycmaB1052
CmaCh20G007860	Cucurbita moschata (Rifu)	cmacmoB542
CmaCh20G007860	Wild cucumber (PI 183967)	cmacpiB547
CmaCh20G007860	Cucumber (Chinese Long) v2	cmacuB541
CmaCh20G007860	Cucumber (Chinese Long) v2	cmacuB542
CmaCh20G007860	Cucumber (Chinese Long) v2	cmacuB573
CmaCh20G007860	Melon (DHL92) v3.5.1	cmameB510
CmaCh20G007860	Watermelon (Charleston Gray)	cmawcgB477
CmaCh20G007860	Watermelon (97103) v1	cmawmB526
CmaCh20G007860	Cucurbita pepo (Zucchini)	cmacpeB565
CmaCh20G007860	Cucurbita pepo (Zucchini)	cmacpeB570
CmaCh20G007860	Cucurbita pepo (Zucchini)	cmacpeB585
CmaCh20G007860	Bottle gourd (USVL1VR-Ls)	cmalsiB514
CmaCh20G007860	Cucumber (Gy14) v2	cgybcmaB218
CmaCh20G007860	Cucumber (Gy14) v2	cgybcmaB956
CmaCh20G007860	Melon (DHL92) v3.6.1	cmamedB587
CmaCh20G007860	Silver-seed gourd	carcmaB0441
CmaCh20G007860	Cucumber (Chinese Long) v3	cmacucB0651
CmaCh20G007860	Cucumber (Chinese Long) v3	cmacucB0687