Cucsa.169380 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.169380
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold01163 : 252361 .. 252585 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGA

mRNA sequence

CATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGA

Coding sequence (CDS)

CATGTTCAATTTGATGTTCCAAAAGGTCATATAGCAGTTTATGTTGGAGATATCCAAAGGAAGCGGTTTTTAGTTCCGATATCCTACTTGAACCATCCTACATTCATGGCTTTACTTAAGAGAGCTGAAGAAGAGTTTGGATACAATCATCCAATGGGAGGTTTGACAATTCCCTGCAGAGAAGATGCTTTCATGGATCTTACTTCAAGGCTACATAGTTCTTGA

Protein sequence

HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMDLTSRLHSS*

Homology

[Close]

BLAST of Cucsa.169380 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 6.6e-23
Identity = 46/66 (69.70%), Postives = 59/66 (89.39%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 67 LTSRLH 73
          +TSRLH
Sbjct: 85 VTSRLH 90

[Close]

BLAST of Cucsa.169380 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-22
Identity = 45/65 (69.23%), Postives = 58/65 (89.23%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 67 LTSRL 72
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cucsa.169380 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.3e-22
Identity = 44/65 (67.69%), Postives = 58/65 (89.23%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++E+EFG++HPMGGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 67 LTSRL 72
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cucsa.169380 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 9.6e-22
Identity = 45/64 (70.31%), Postives = 57/64 (89.06%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVPISYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 67 LTSR 71
          +TSR
Sbjct: 85 VTSR 88

[Close]

BLAST of Cucsa.169380 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-21
Identity = 44/65 (67.69%), Postives = 58/65 (89.23%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVP+SYL+ P+F ALL ++EEEFG++HPMGGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 67 LTSRL 72
          +TSRL
Sbjct: 83 VTSRL 87

[Close]

BLAST of Cucsa.169380 vs. TrEMBL
Match: A0A0A0LLG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258800 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 6.2e-36
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1


Query: 1  HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR 60
          HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR
Sbjct: 19 HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR 78

Query: 61 EDAFMDLTSRLHSS 75
          EDAFMDLTSRLHSS
Sbjct: 79 EDAFMDLTSRLHSS 92

[Close]

BLAST of Cucsa.169380 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 8.2e-28
Identity = 58/73 (79.45%), Postives = 69/73 (94.52%), Query Frame = 1


Query: 2  VQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCRE 61
          V+ D+PKGHIAVYVG+IQ KRF+VPIS+LNHP+F+ LLKRAEEEFG+NHPMGGLTIPCRE
Sbjct: 25 VKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCRE 84

Query: 62 DAFMDLTSRLHSS 75
          + F+DLTSRLH+S
Sbjct: 85 ETFIDLTSRLHTS 97

[Close]

BLAST of Cucsa.169380 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-27
Identity = 55/70 (78.57%), Postives = 68/70 (97.14%), Query Frame = 1


Query: 5  DVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAF 64
          ++PKGHIAVYVG+I+RKRF+VP+SYLNHPTF++LL RAEEEFG+NHP GGLTIPC+EDAF
Sbjct: 28 NIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLSLLNRAEEEFGFNHPSGGLTIPCKEDAF 87

Query: 65 MDLTSRLHSS 75
          +DLTS+LH+S
Sbjct: 88 IDLTSKLHTS 97

[Close]

BLAST of Cucsa.169380 vs. TrEMBL
Match: A0A061DYL9_THECC (SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006722 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 3.1e-27
Identity = 58/72 (80.56%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 3   QFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCRED 62
           Q DVPKGHIAVYVG+IQ+ R++VPISYLNHP+F+ LL RA+EEFG+NHPMGGLTIPC ED
Sbjct: 47  QTDVPKGHIAVYVGEIQKTRYVVPISYLNHPSFLDLLNRAQEEFGFNHPMGGLTIPCDED 106

Query: 63  AFMDLTSRLHSS 75
           AF+DLTSRLHSS
Sbjct: 107 AFIDLTSRLHSS 118

[Close]

BLAST of Cucsa.169380 vs. TrEMBL
Match: A0A0A0LIZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.0e-27
Identity = 57/72 (79.17%), Postives = 68/72 (94.44%), Query Frame = 1


Query: 3  QFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCRED 62
          Q  VPKGHIAVYVG+IQ+KRFLVPISYLNHP+F+ LL+RAEEEFG+NHP GGLTIPC+E+
Sbjct: 26 QSSVPKGHIAVYVGEIQKKRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEE 85

Query: 63 AFMDLTSRLHSS 75
          AF+D+TSRLH+S
Sbjct: 86 AFIDVTSRLHTS 97

[Close]

BLAST of Cucsa.169380 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 107.5 bits (267), Expect = 3.7e-24
Identity = 46/66 (69.70%), Postives = 59/66 (89.39%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 67 LTSRLH 73
          +TSRLH
Sbjct: 85 VTSRLH 90

[Close]

BLAST of Cucsa.169380 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.1 bits (261), Expect = 1.9e-23
Identity = 49/70 (70.00%), Postives = 60/70 (85.71%), Query Frame = 1


Query: 6   VPKGHIAVYVGD---IQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCRED 65
           VPKGH+AVYVG+   +++KRF+VPIS+LNHP+F   L RAEEEFG+NHPMGGLTIPCRE+
Sbjct: 35  VPKGHVAVYVGEQIEMEKKRFVVPISFLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREE 94

Query: 66  AFMDL-TSRL 72
            F+DL  SRL
Sbjct: 95  VFLDLIASRL 104

[Close]

BLAST of Cucsa.169380 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.8 bits (260), Expect = 2.4e-23
Identity = 45/65 (69.23%), Postives = 58/65 (89.23%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++EEEFG++HPMGGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 67 LTSRL 72
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cucsa.169380 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.4 bits (259), Expect = 3.2e-23
Identity = 45/70 (64.29%), Postives = 61/70 (87.14%), Query Frame = 1


Query: 6  VPKGHIAVYVGDI-QRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAF 65
          +PKGH+AVYVG++ Q++RF+VP++YL+HP F  LL++AEEEFG++HPMGGLTIPC E  F
Sbjct: 28 IPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQKLLRKAEEEFGFDHPMGGLTIPCTEQIF 87

Query: 66 MDLTSRLHSS 75
          +DL SRL +S
Sbjct: 88 IDLASRLSTS 97

[Close]

BLAST of Cucsa.169380 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 104.0 bits (258), Expect = 4.1e-23
Identity = 44/65 (67.69%), Postives = 58/65 (89.23%), Query Frame = 1


Query: 7  PKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAFMD 66
          PKG +AVYVG+ Q+KR+LVP+SYLN P+F ALL ++E+EFG++HPMGGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 67 LTSRL 72
          +TSRL
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cucsa.169380 vs. NCBI nr
Match: gi|449458558|ref|XP_004147014.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 157.5 bits (397), Expect = 8.9e-36
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 1


Query: 1  HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR 60
          HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR
Sbjct: 19 HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR 78

Query: 61 EDAFMDLTSRLHSS 75
          EDAFMDLTSRLHSS
Sbjct: 79 EDAFMDLTSRLHSS 92

[Close]

BLAST of Cucsa.169380 vs. NCBI nr
Match: gi|659115602|ref|XP_008457638.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 6.4e-34
Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = 1


Query: 1  HVQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR 60
          HVQ DVPKGHIAVYVGDIQRKRFLVPIS LNHPTFMALLKRAEEEFGYNHPMGGLTIPCR
Sbjct: 19 HVQSDVPKGHIAVYVGDIQRKRFLVPISVLNHPTFMALLKRAEEEFGYNHPMGGLTIPCR 78

Query: 61 EDAFMDLTSRLHSS 75
          EDAFMDLTSRLHSS
Sbjct: 79 EDAFMDLTSRLHSS 92

[Close]

BLAST of Cucsa.169380 vs. NCBI nr
Match: gi|449458542|ref|XP_004147006.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.2e-27
Identity = 58/73 (79.45%), Postives = 69/73 (94.52%), Query Frame = 1


Query: 2  VQFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCRE 61
          V+ D+PKGHIAVYVG+IQ KRF+VPIS+LNHP+F+ LLKRAEEEFG+NHPMGGLTIPCRE
Sbjct: 25 VKSDIPKGHIAVYVGEIQTKRFVVPISFLNHPSFLNLLKRAEEEFGFNHPMGGLTIPCRE 84

Query: 62 DAFMDLTSRLHSS 75
          + F+DLTSRLH+S
Sbjct: 85 ETFIDLTSRLHTS 97

[Close]

BLAST of Cucsa.169380 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 3.4e-27
Identity = 55/70 (78.57%), Postives = 68/70 (97.14%), Query Frame = 1


Query: 5  DVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCREDAF 64
          ++PKGHIAVYVG+I+RKRF+VP+SYLNHPTF++LL RAEEEFG+NHP GGLTIPC+EDAF
Sbjct: 28 NIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLSLLNRAEEEFGFNHPSGGLTIPCKEDAF 87

Query: 65 MDLTSRLHSS 75
          +DLTS+LH+S
Sbjct: 88 IDLTSKLHTS 97

[Close]

BLAST of Cucsa.169380 vs. NCBI nr
Match: gi|590684890|ref|XP_007041959.1| (SAUR-like auxin-responsive protein family [Theobroma cacao])

HSP 1 Score: 128.6 bits (322), Expect = 4.4e-27
Identity = 58/72 (80.56%), Postives = 67/72 (93.06%), Query Frame = 1


Query: 3   QFDVPKGHIAVYVGDIQRKRFLVPISYLNHPTFMALLKRAEEEFGYNHPMGGLTIPCRED 62
           Q DVPKGHIAVYVG+IQ+ R++VPISYLNHP+F+ LL RA+EEFG+NHPMGGLTIPC ED
Sbjct: 47  QTDVPKGHIAVYVGEIQKTRYVVPISYLNHPSFLDLLNRAQEEFGFNHPMGGLTIPCDED 106

Query: 63  AFMDLTSRLHSS 75
           AF+DLTSRLHSS
Sbjct: 107 AFIDLTSRLHSS 118

The following BLAST results are available for this feature:

BLAST of Cucsa.169380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	6.6e-23	69.70	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU24_ARATH	4.3e-22	69.23	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	7.3e-22	67.69	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU20_ARATH	9.6e-22	70.31	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU21_ARATH	2.1e-21	67.69	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of Cucsa.169380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLG5_CUCSA	6.2e-36	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258800 PE=4 SV=1	[more]
A0A0A0LPG7_CUCSA	8.2e-28	79.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	2.4e-27	78.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A061DYL9_THECC	3.1e-27	80.56	SAUR-like auxin-responsive protein family OS=Theobroma cacao GN=TCM_006722 PE=4 ...	[more]
A0A0A0LIZ4_CUCSA	4.0e-27	79.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258710 PE=4 SV=1	[more]

BLAST of Cucsa.169380 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18060.1	3.7e-24	69.70	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.9e-23	70.00	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	2.4e-23	69.23	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	3.2e-23	64.29	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	4.1e-23	67.69	SAUR-like auxin-responsive protein family	[more]

BLAST of Cucsa.169380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458558\|ref\|XP_004147014.1\|	8.9e-36	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115602\|ref\|XP_008457638.1\|	6.4e-34	97.30	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|449458542\|ref\|XP_004147006.1\|	1.2e-27	79.45	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	3.4e-27	78.57	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|590684890\|ref\|XP_007041959.1\|	4.4e-27	80.56	SAUR-like auxin-responsive protein family [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.169380.1	Cucsa.169380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 4..70 score: 4.4
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 5..74 score: 2.2
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 5..74 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.169380	Csa2G258800	Cucumber (Chinese Long) v2	cgycuB257
Cucsa.169380	MELO3C020770	Melon (DHL92) v3.5.1	cgymeB301
Cucsa.169380	MELO3C013397	Melon (DHL92) v3.5.1	cgymeB302
Cucsa.169380	CSPI02G13020	Wild cucumber (PI 183967)	cgycpiB265
Cucsa.169380	CmaCh20G007810	Cucurbita maxima (Rimu)	cgycmaB0479
Cucsa.169380	CmaCh02G003380	Cucurbita maxima (Rimu)	cgycmaB0480
Cucsa.169380	CmoCh20G007770	Cucurbita moschata (Rifu)	cgycmoB0482
Cucsa.169380	Lsi10G004470	Bottle gourd (USVL1VR-Ls)	cgylsiB281
Cucsa.169380	MELO3C034602.2	Melon (DHL92) v3.6.1	cgymedB294
Cucsa.169380	CsaV3_2G015580	Cucumber (Chinese Long) v3	cgycucB270
Cucsa.169380	Cla97C11G210270	Watermelon (97103) v2	cgywmbB304
Cucsa.169380	Cla97C11G210390	Watermelon (97103) v2	cgywmbB305

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.169380	Wax gourd	cgywgoB348
Cucsa.169380	Cucumber (Gy14) v1	cgycgyB107
Cucsa.169380	Cucurbita moschata (Rifu)	cgycmoB0483
Cucsa.169380	Wild cucumber (PI 183967)	cgycpiB266
Cucsa.169380	Cucumber (Chinese Long) v2	cgycuB258
Cucsa.169380	Watermelon (Charleston Gray)	cgywcgB301
Cucsa.169380	Watermelon (97103) v1	cgywmB321
Cucsa.169380	Watermelon (97103) v1	cgywmB323
Cucsa.169380	Cucurbita pepo (Zucchini)	cgycpeB0466
Cucsa.169380	Cucurbita pepo (Zucchini)	cgycpeB0467