CmaCh02G003380 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh02G003380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SAUR-like auxin-responsive protein family
Location	Cma_Chr02 : 1671360 .. 1671653 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAATCAGACTACCTTCACTTCTCCTTAATGCTAAGCAAGTTGTAAGAATGCAGACGGTTTCTTCAAGAAGCCAATGTGGTGTTCCAAAGGGTCATATTGCAGTCTATGTGGGGGAGATTGAAAGGAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCTTCTTTCGTAGCTCTACTCAAGACAGCTGAAGAAGAATTTGGATTTAAACATCCAACCGGAGGTTTAACAATTCCTTGCAGAGAAGATGCCTTCCTCAACCTCACTTCTAGGCTGCATACTCCCTGA

mRNA sequence

ATGGGAATCAGACTACCTTCACTTCTCCTTAATGCTAAGCAAGTTGTAAGAATGCAGACGGTTTCTTCAAGAAGCCAATGTGGTGTTCCAAAGGGTCATATTGCAGTCTATGTGGGGGAGATTGAAAGGAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCTTCTTTCGTAGCTCTACTCAAGACAGCTGAAGAAGAATTTGGATTTAAACATCCAACCGGAGGTTTAACAATTCCTTGCAGAGAAGATGCCTTCCTCAACCTCACTTCTAGGCTGCATACTCCCTGA

Coding sequence (CDS)

ATGGGAATCAGACTACCTTCACTTCTCCTTAATGCTAAGCAAGTTGTAAGAATGCAGACGGTTTCTTCAAGAAGCCAATGTGGTGTTCCAAAGGGTCATATTGCAGTCTATGTGGGGGAGATTGAAAGGAAGCGGTTTGTAGTTCCGATATCATACTTGAACCATCCTTCTTTCGTAGCTCTACTCAAGACAGCTGAAGAAGAATTTGGATTTAAACATCCAACCGGAGGTTTAACAATTCCTTGCAGAGAAGATGCCTTCCTCAACCTCACTTCTAGGCTGCATACTCCCTGA

Protein sequence

MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHTP

Homology

[Close]

BLAST of CmaCh02G003380 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 9  LLNAKQVVRMQTVSSRSQCGV---PKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTA 68
          LL AK+++      SRS   V   PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +
Sbjct: 7  LLVAKKIL------SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKS 66

Query: 69 EEEFGFKHPTGGLTIPCREDAFLNLTSRLH 96
          EEEFGF HP GGLTIPC ED F+N+TSRLH
Sbjct: 67 EEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmaCh02G003380 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTAEEE 68
          LL AK+++   T ++ +    PKG +AVYVGE ++KR++VPISYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTTAASA---APKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDAFLNLTSR 94
          FGF HP GGLTIPC ED F+N+TSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmaCh02G003380 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTAEEE 68
          LL AK+++   T +  +    PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDAFLNLTSRL 95
          FGF HP GGLTIPC ED F+N+TSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmaCh02G003380 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 50/86 (58.14%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTAEEE 68
          LL AK+++   T +  +    PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +E+E
Sbjct: 7  LLGAKKILSRSTAAVSA---APKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDE 66

Query: 69 FGFKHPTGGLTIPCREDAFLNLTSRL 95
          FGF HP GGLTIPC ED F+N+TSRL
Sbjct: 67 FGFDHPMGGLTIPCHEDTFINVTSRL 89

[Close]

BLAST of CmaCh02G003380 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 1


Query: 9  LLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTAEEE 68
          LL AK+++   T S+      PKG +AVYVGE ++KR++VP+SYL+ PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDAFLNLTSRL 95
          FGF HP GGLTIPC ED F+N+TSRL
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSRL 87

[Close]

BLAST of CmaCh02G003380 vs. TrEMBL
Match: A0A0A0LM71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.4e-42
Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRLPSLLLNAKQV +M TVSSR+QCGVPKGHIAVYVG+IERKRFVVP+SYLNHPSF A
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRL 95
          LLK+AEEEFGFKHPTGGLTIPCRED F+NLTSRL
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of CmaCh02G003380 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.0e-38
Identity = 74/96 (77.08%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIR+PSLLLNAKQ+ RMQ+VS+R    +PKGHIAVYVGEIERKRFVVP+SYLNHP+F++
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHT 97
          LL  AEEEFGF HP+GGLTIPC+EDAF++LTS+LHT
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHT 96

[Close]

BLAST of CmaCh02G003380 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 9.5e-37
Identity = 75/96 (78.12%), Postives = 87/96 (90.62%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRLPS+LLNAKQ+++MQ +S+R+Q  VPKGHIAVYVGEI+RKRFVVPISYL +PSFV 
Sbjct: 1  MGIRLPSILLNAKQILKMQAMSARNQFDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHT 97
          LL  +EEEFGF HP GGLTIPCREDAF+NLT+RLHT
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHT 96

[Close]

BLAST of CmaCh02G003380 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 6.2e-36
Identity = 74/96 (77.08%), Postives = 86/96 (89.58%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRL S+LLNAKQ+++MQ +S+R+Q  VPKGHIAVYVGEI+RKRFVVPISYL +PSFV 
Sbjct: 1  MGIRLQSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKNPSFVD 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHT 97
          LL  +EEEFGF HP GGLTIPCREDAF+NLT+RLHT
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHT 96

[Close]

BLAST of CmaCh02G003380 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-35
Identity = 72/95 (75.79%), Postives = 86/95 (90.53%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRLPS+LL+AKQ+++M+TVS+R Q  VPKGHI VYVGE +RKRF+VPISYLNHPSFV 
Sbjct: 1  MGIRLPSVLLSAKQILKMKTVSTRCQSDVPKGHIPVYVGENQRKRFLVPISYLNHPSFVN 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLH 96
          LL  AEEEFGF HPTGGLTIPC+E+AF+++TSRLH
Sbjct: 61 LLSRAEEEFGFSHPTGGLTIPCKEEAFIDVTSRLH 95

[Close]

BLAST of CmaCh02G003380 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-26
Identity = 56/99 (56.57%), Postives = 73/99 (73.74%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVR----MQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHP 60
          M IR+P +L ++KQ++R    + + SS S   VPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFVALLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLH 96
          SF  LL+ AEEEFGF HP GGLTIPC E+ F++L SR +
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASRFN 99

[Close]

BLAST of CmaCh02G003380 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25
Identity = 53/97 (54.64%), Postives = 74/97 (76.29%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEI-ERKRFVVPISYLNHPSFV 60
          M IR+  +L ++KQ+++  + SS +   +PKGH+AVYVGE+ +++RFVVP++YL+HP F 
Sbjct: 1  MAIRISRVLQSSKQLLKSLSHSSNN-VAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 ALLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHT 97
           LL+ AEEEFGF HP GGLTIPC E  F++L SRL T
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLST 96

[Close]

BLAST of CmaCh02G003380 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 5.7e-25
Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 1


Query: 9  LLNAKQVVRMQTVSSRSQCGV---PKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTA 68
          LL AK+++      SRS   V   PKG +AVYVGE ++KR++VP+SYLN PSF ALL  +
Sbjct: 7  LLVAKKIL------SRSAAAVSAPPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKS 66

Query: 69 EEEFGFKHPTGGLTIPCREDAFLNLTSRLH 96
          EEEFGF HP GGLTIPC ED F+N+TSRLH
Sbjct: 67 EEEFGFDHPMGGLTIPCPEDTFINVTSRLH 90

[Close]

BLAST of CmaCh02G003380 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.2 bits (274), Expect = 7.5e-25
Identity = 58/92 (63.04%), Postives = 66/92 (71.74%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEI--ERKRFVVPISYLNHPSF 60
          M IRL S ++N+KQ       S + Q  VPKGH+AVYVGE    +KRFVVPISYLNHPSF
Sbjct: 1  MAIRL-SRVINSKQ-------SQKQQSRVPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 VALLKTAEEEFGFKHPTGGLTIPCREDAFLNL 91
            LL  AEEEFGF HP GGLTIPCRE+ F+ L
Sbjct: 61 QGLLSRAEEEFGFNHPIGGLTIPCREETFVGL 84

[Close]

BLAST of CmaCh02G003380 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.8 bits (273), Expect = 9.7e-25
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 9  LLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVALLKTAEEE 68
          LL AK+++   T ++ +    PKG +AVYVGE ++KR++VPISYLN PSF ALL  +EEE
Sbjct: 7  LLGAKKILSRSTTAASA---APKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEE 66

Query: 69 FGFKHPTGGLTIPCREDAFLNLTSR 94
          FGF HP GGLTIPC ED F+N+TSR
Sbjct: 67 FGFDHPMGGLTIPCPEDTFINVTSR 88

[Close]

BLAST of CmaCh02G003380 vs. NCBI nr
Match: gi|449458562|ref|XP_004147016.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 6.3e-42
Identity = 84/94 (89.36%), Postives = 90/94 (95.74%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRLPSLLLNAKQV +M TVSSR+QCGVPKGHIAVYVG+IERKRFVVP+SYLNHPSF A
Sbjct: 1  MGIRLPSLLLNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRL 95
          LLK+AEEEFGFKHPTGGLTIPCRED F+NLTSRL
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of CmaCh02G003380 vs. NCBI nr
Match: gi|659115600|ref|XP_008457637.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 83/94 (88.30%), Postives = 89/94 (94.68%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRLPSLL NAKQV +M TVSSR+QCGVPKGHIAVYVG+IERKRFVVP+SYLNHPSF A
Sbjct: 1  MGIRLPSLLFNAKQVFKMHTVSSRNQCGVPKGHIAVYVGDIERKRFVVPLSYLNHPSFSA 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRL 95
          LLK+AEEEFGFKHPTGGLTIPCRED F+NLTSRL
Sbjct: 61 LLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL 94

[Close]

BLAST of CmaCh02G003380 vs. NCBI nr
Match: gi|778669580|ref|XP_011649270.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 7.2e-38
Identity = 74/96 (77.08%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIR+PSLLLNAKQ+ RMQ+VS+R    +PKGHIAVYVGEIERKRFVVP+SYLNHP+F++
Sbjct: 1  MGIRMPSLLLNAKQIFRMQSVSTRCHSNIPKGHIAVYVGEIERKRFVVPVSYLNHPTFLS 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHT 97
          LL  AEEEFGF HP+GGLTIPC+EDAF++LTS+LHT
Sbjct: 61 LLNRAEEEFGFNHPSGGLTIPCKEDAFIDLTSKLHT 96

[Close]

BLAST of CmaCh02G003380 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 164.1 bits (414), Expect = 1.2e-37
Identity = 77/96 (80.21%), Postives = 87/96 (90.62%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRLPS+LLNAKQV++MQ +S+R+Q  VPKGHIAVYVGEI+RKRFVVPISYL HPSFV 
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHT 97
          LL  +EEEFGF HP GGLTIPCREDAF+NLT+RLHT
Sbjct: 61 LLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHT 96

[Close]

BLAST of CmaCh02G003380 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-37
Identity = 77/96 (80.21%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1  MGIRLPSLLLNAKQVVRMQTVSSRSQCGVPKGHIAVYVGEIERKRFVVPISYLNHPSFVA 60
          MGIRLPS+LLNAKQV++MQ +S+R+Q  VPKG+IAVYVGEI+RKRFVVPISYL HPSFV 
Sbjct: 1  MGIRLPSILLNAKQVLKMQAMSARNQSDVPKGYIAVYVGEIQRKRFVVPISYLKHPSFVD 60

Query: 61 LLKTAEEEFGFKHPTGGLTIPCREDAFLNLTSRLHT 97
          LLK +EEEFGF HP GGLTIPCREDAF+NLT+RLHT
Sbjct: 61 LLKRSEEEFGFCHPMGGLTIPCREDAFINLTARLHT 96

The following BLAST results are available for this feature:

BLAST of CmaCh02G003380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU23_ARATH	1.0e-23	61.11	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU20_ARATH	1.7e-23	60.00	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU24_ARATH	2.3e-23	59.30	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU22_ARATH	3.0e-23	58.14	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU21_ARATH	3.0e-23	59.30	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of CmaCh02G003380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM71_CUCSA	4.4e-42	89.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258780 PE=4 SV=1	[more]
A0A0A0LPH3_CUCSA	5.0e-38	77.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1	[more]
A0A0A0LM74_CUCSA	9.5e-37	78.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1	[more]
A0A0A0LPJ1_CUCSA	6.2e-36	77.08	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1	[more]
A0A0A0LM65_CUCSA	1.4e-35	75.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1	[more]

BLAST of CmaCh02G003380 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.0e-26	56.57	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.6e-25	54.64	SAUR-like auxin-responsive protein family	[more]
AT5G18060.1	5.7e-25	61.11	SAUR-like auxin-responsive protein family	[more]
AT4G34800.1	7.5e-25	63.04	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	9.7e-25	60.00	SAUR-like auxin-responsive protein family	[more]

BLAST of CmaCh02G003380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449458562\|ref\|XP_004147016.1\|	6.3e-42	89.36	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115600\|ref\|XP_008457637.1\|	1.8e-41	88.30	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669580\|ref\|XP_011649270.1\|	7.2e-38	77.08	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|778669614\|ref\|XP_011649278.1\|	1.2e-37	80.21	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115604\|ref\|XP_008457639.1\|	1.6e-37	80.21	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G003380.1	CmaCh02G003380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..93 score: 3.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..95 score: 3.5
None	No IPR available	PANTHER	PTHR31929:SF3	SUBFAMILY NOT NAMED	coord: 2..95 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh02G003380	Cucsa.169380	Cucumber (Gy14) v1	cgycmaB0480
CmaCh02G003380	Cla016634	Watermelon (97103) v1	cmawmB610
CmaCh02G003380	ClCG02G004400	Watermelon (Charleston Gray)	cmawcgB531
CmaCh02G003380	CmoCh02G003410	Cucurbita moschata (Rifu)	cmacmoB619
CmaCh02G003380	CmoCh20G007790	Cucurbita moschata (Rifu)	cmacmoB606
CmaCh02G003380	CsaV3_2G015560	Cucumber (Chinese Long) v3	cmacucB0701
CmaCh02G003380	Cla97C11G210270	Watermelon (97103) v2	cmawmbB613

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh02G003380	CmaCh20G007840	Cucurbita maxima (Rimu)	cmacmaB469

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh02G003380	Silver-seed gourd	carcmaB0442
CmaCh02G003380	Cucumber (Chinese Long) v3	cmacucB0724
CmaCh02G003380	Cucumber (Chinese Long) v3	cmacucB0769
CmaCh02G003380	Watermelon (97103) v2	cmawmbB608
CmaCh02G003380	Wax gourd	cmawgoB0734
CmaCh02G003380	Wax gourd	cmawgoB0745
CmaCh02G003380	Wax gourd	cmawgoB0767
CmaCh02G003380	Cucurbita maxima (Rimu)	cmacmaB452
CmaCh02G003380	Cucumber (Gy14) v1	cgycmaB1053
CmaCh02G003380	Cucurbita moschata (Rifu)	cmacmoB599
CmaCh02G003380	Wild cucumber (PI 183967)	cmacpiB593
CmaCh02G003380	Wild cucumber (PI 183967)	cmacpiB651
CmaCh02G003380	Cucumber (Chinese Long) v2	cmacuB588
CmaCh02G003380	Cucumber (Chinese Long) v2	cmacuB644
CmaCh02G003380	Melon (DHL92) v3.5.1	cmameB537
CmaCh02G003380	Melon (DHL92) v3.5.1	cmameB563
CmaCh02G003380	Watermelon (Charleston Gray)	cmawcgB517
CmaCh02G003380	Watermelon (97103) v1	cmawmB586
CmaCh02G003380	Cucurbita pepo (Zucchini)	cmacpeB616
CmaCh02G003380	Cucurbita pepo (Zucchini)	cmacpeB626
CmaCh02G003380	Cucurbita pepo (Zucchini)	cmacpeB646
CmaCh02G003380	Bottle gourd (USVL1VR-Ls)	cmalsiB548
CmaCh02G003380	Bottle gourd (USVL1VR-Ls)	cmalsiB565
CmaCh02G003380	Bottle gourd (USVL1VR-Ls)	cmalsiB577
CmaCh02G003380	Cucumber (Gy14) v2	cgybcmaB229
CmaCh02G003380	Cucumber (Gy14) v2	cgybcmaB961
CmaCh02G003380	Melon (DHL92) v3.6.1	cmamedB617
CmaCh02G003380	Melon (DHL92) v3.6.1	cmamedB643
CmaCh02G003380	Melon (DHL92) v3.6.1	cmamedB670