CmaCh20G007810 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATCCGTTTGCCATCGATTCTTCGTAATGCCAAGCAGATTCTGAAAATGCAAGCTATATCTGCAAGAAATCAATCTGATGTTCCCAAAGGCCACATTGCAGTCTACGTGGGAGAGATTCAAAGGAAGAGATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGACGATTCCATGCAGAGAAGATGCTTTCATAAATCTCACTGATAGGCTGCATAGATCATGA ATGGGAATCCGTTTGCCATCGATTCTTCGTAATGCCAAGCAGATTCTGAAAATGCAAGCTATATCTGCAAGAAATCAATCTGATGTTCCCAAAGGCCACATTGCAGTCTACGTGGGAGAGATTCAAAGGAAGAGATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGACGATTCCATGCAGAGAAGATGCTTTCATAAATCTCACTGATAGGCTGCATAGATCATGA ATGGGAATCCGTTTGCCATCGATTCTTCGTAATGCCAAGCAGATTCTGAAAATGCAAGCTATATCTGCAAGAAATCAATCTGATGTTCCCAAAGGCCACATTGCAGTCTACGTGGGAGAGATTCAAAGGAAGAGATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCATCCAATGGGCGGCTTGACGATTCCATGCAGAGAAGATGCTTTCATAAATCTCACTGATAGGCTGCATAGATCATGA MGIRLPSILRNAKQILKMQAISARNQSDVPKGHIAVYVGEIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTDRLHRS
BLAST of CmaCh20G007810 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24 Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 1
BLAST of CmaCh20G007810 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 4.6e-24 Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 1
BLAST of CmaCh20G007810 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23 Identity = 53/86 (61.63%), Postives = 63/86 (73.26%), Query Frame = 1
BLAST of CmaCh20G007810 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23 Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 1
BLAST of CmaCh20G007810 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.9e-23 Identity = 52/86 (60.47%), Postives = 63/86 (73.26%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 7.3e-45 Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.2e-44 Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.4e-40 Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 2.8e-36 Identity = 71/97 (73.20%), Postives = 86/97 (88.66%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TrEMBL
Match: A0A0A0LM65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258730 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 4.7e-36 Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 121.7 bits (304), Expect = 2.5e-28 Identity = 57/99 (57.58%), Postives = 75/99 (75.76%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27 Identity = 56/98 (57.14%), Postives = 75/98 (76.53%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.5 bits (288), Expect = 1.8e-26 Identity = 56/99 (56.57%), Postives = 75/99 (75.76%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25 Identity = 54/84 (64.29%), Postives = 64/84 (76.19%), Query Frame = 1
BLAST of CmaCh20G007810 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25 Identity = 55/88 (62.50%), Postives = 64/88 (72.73%), Query Frame = 1
BLAST of CmaCh20G007810 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 192.2 bits (487), Expect = 4.2e-46 Identity = 92/97 (94.85%), Postives = 94/97 (96.91%), Query Frame = 1
BLAST of CmaCh20G007810 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus]) HSP 1 Score: 187.6 bits (475), Expect = 1.0e-44 Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CmaCh20G007810 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 187.6 bits (475), Expect = 1.0e-44 Identity = 90/97 (92.78%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CmaCh20G007810 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 1.8e-44 Identity = 91/97 (93.81%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CmaCh20G007810 vs. NCBI nr
Match: gi|700206766|gb|KGN61885.1| (hypothetical protein Csa_2G258810 [Cucumis sativus]) HSP 1 Score: 171.4 bits (433), Expect = 7.7e-40 Identity = 80/90 (88.89%), Postives = 85/90 (94.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |