Cucsa.169390 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.169390
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	SAUR-like auxin-responsive protein family
Location	scaffold01163 : 253735 .. 253950 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGA

mRNA sequence

TTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGA

Coding sequence (CDS)

TTGGGTGTTCCAAAAGGCCATGTTGCCGTTTATGTGGGAGAGATTCAAATGAAGCGGTTCGTGGTTCCAATATCTTACCTAAACGATCTGTCGTTCCAGCAACTGCTCAGCTACGCAGAGGAAGAGTTTGGATTCCATCATCCTCAAGGGGGCCTAACAATCCCTTGCAAAGAAGATGCCTTCGTTGATCTCACTTCTAAATTGCAAGTATCTTGA

Protein sequence

LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS*

Homology

[Close]

BLAST of Cucsa.169390 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.0e-21
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 64 LTSKLQ 70
          +TS+LQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169390 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.3e-20
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VPISYLN  SFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 64 LTSKLQ 70
          +TS+ Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of Cucsa.169390 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-20
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 64 LTSKLQ 70
          +TS+LQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169390 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.0e-20
Identity = 45/65 (69.23%), Postives = 54/65 (83.08%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 64 LTSKL 69
          +TS+L
Sbjct: 85 VTSRL 89

[Close]

BLAST of Cucsa.169390 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.0e-20
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VP+SYL+  SFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 64 LTSKLQ 70
          +TS+LQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Cucsa.169390 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 8.1e-33
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA
Sbjct: 27 LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          FVDLTSKLQVS
Sbjct: 87 FVDLTSKLQVS 97

[Close]

BLAST of Cucsa.169390 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 9.2e-29
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHVAVYVGEIQ KRFVVPISYLND SFQQLLS+AEEEFGFHHP GGLTIPCKEDA
Sbjct: 27 LNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          FVDLTS+LQV+
Sbjct: 87 FVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169390 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.3e-27
Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHVAVYVGEIQ KRFVVP+SYLND SFQQLLS AEEEFGFHHP GGLTIPCKEDA
Sbjct: 27 LDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGFHHPHGGLTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          FVDLTS+L+V+
Sbjct: 87 FVDLTSRLKVA 97

[Close]

BLAST of Cucsa.169390 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.1e-27
Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHVA+YVGEIQ KRFVVPISYLN  SFQQLL+++EEEFGFHHPQG LTIPCKEDA
Sbjct: 27 LDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQLLNHSEEEFGFHHPQGALTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          F+DLTS+LQ+S
Sbjct: 87 FIDLTSRLQIS 97

[Close]

BLAST of Cucsa.169390 vs. TrEMBL
Match: A0A0A0LPI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258770 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-26
Identity = 60/71 (84.51%), Postives = 63/71 (88.73%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHV VYVGE+Q KRFVVPISYLN  SFQQLL YAEEEFGF HPQGGLTIPCKED 
Sbjct: 27 LSVPKGHVVVYVGEMQKKRFVVPISYLNHPSFQQLLKYAEEEFGFQHPQGGLTIPCKEDT 86

Query: 61 FVDLTSKLQVS 72
          F+DLTS+LQVS
Sbjct: 87 FIDLTSRLQVS 97

[Close]

BLAST of Cucsa.169390 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.9 bits (250), Expect = 3.4e-22
Identity = 46/66 (69.70%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 64 LTSKLQ 70
          +TS+LQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169390 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 100.9 bits (250), Expect = 3.4e-22
Identity = 47/67 (70.15%), Postives = 54/67 (80.60%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKG++AVYVGE  MKRFVVP+SYL+  SFQ LL  AEEEFGF HP GGLTIPC E+ 
Sbjct: 31 LDVPKGYLAVYVGEQNMKRFVVPVSYLDQPSFQDLLRKAEEEFGFDHPMGGLTIPCSEEI 90

Query: 61 FVDLTSK 68
          F+DL S+
Sbjct: 91 FIDLASR 97

[Close]

BLAST of Cucsa.169390 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.8 bits (247), Expect = 7.5e-22
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VPISYLN  SFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 64 LTSKLQ 70
          +TS+ Q
Sbjct: 85 VTSRFQ 90

[Close]

BLAST of Cucsa.169390 vs. TAIR10
Match: AT5G18050.1 (AT5G18050.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 99.4 bits (246), Expect = 9.8e-22
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VP+SYLN  SFQ LLS +E+EFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMGGLTIPCHEDTFIN 84

Query: 64 LTSKLQ 70
          +TS+LQ
Sbjct: 85 VTSRLQ 90

[Close]

BLAST of Cucsa.169390 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 98.6 bits (244), Expect = 1.7e-21
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1


Query: 4  PKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDAFVD 63
          PKG +AVYVGE Q KR++VP+SYL+  SFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 64 LTSKLQ 70
          +TS+LQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Cucsa.169390 vs. NCBI nr
Match: gi|700206764|gb|KGN61883.1| (hypothetical protein Csa_2G258790 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-32
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA
Sbjct: 27 LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          FVDLTSKLQVS
Sbjct: 87 FVDLTSKLQVS 97

[Close]

BLAST of Cucsa.169390 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 64/71 (90.14%), Postives = 67/71 (94.37%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHVAVYVGEIQ KRFVVPISYLND SFQQLLS+AEEEFGFHHP GGLTIPCKEDA
Sbjct: 27 LNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLSHAEEEFGFHHPHGGLTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          FVDLTS+LQV+
Sbjct: 87 FVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169390 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 2.3e-28
Identity = 64/71 (90.14%), Postives = 66/71 (92.96%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQLLSYAEEEFGFHHPQGGLTIPCKED 
Sbjct: 27 LDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQLLSYAEEEFGFHHPQGGLTIPCKEDT 86

Query: 61 FVDLTSKLQVS 72
          F+DLTS+LQVS
Sbjct: 87 FLDLTSRLQVS 97

[Close]

BLAST of Cucsa.169390 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 131.0 bits (328), Expect = 8.6e-28
Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHVAVYVGEIQ KRFVVPISYLND SFQQLL+ AEEEFGFHHP GGLTIPCKEDA
Sbjct: 27 LNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQLLNRAEEEFGFHHPHGGLTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          FVDLTS+LQV+
Sbjct: 87 FVDLTSRLQVA 97

[Close]

BLAST of Cucsa.169390 vs. NCBI nr
Match: gi|778669593|ref|XP_011649273.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-27
Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 1


Query: 1  LGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQLLSYAEEEFGFHHPQGGLTIPCKEDA 60
          L VPKGHVAVYVGEIQ KRFVVP+SYLND SFQQLLS AEEEFGFHHP GGLTIPCKEDA
Sbjct: 27 LDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGFHHPHGGLTIPCKEDA 86

Query: 61 FVDLTSKLQVS 72
          FVDLTS+L+V+
Sbjct: 87 FVDLTSRLKVA 97

The following BLAST results are available for this feature:

BLAST of Cucsa.169390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	6.0e-21	69.70	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	1.3e-20	69.70	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	1.7e-20	68.18	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU23_ARATH	3.0e-20	69.23	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU21_ARATH	3.0e-20	68.18	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of Cucsa.169390 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJA3_CUCSA	8.1e-33	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	9.2e-29	90.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	1.3e-27	87.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	5.1e-27	83.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LPI5_CUCSA	1.1e-26	84.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258770 PE=4 SV=1	[more]

BLAST of Cucsa.169390 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18080.1	3.4e-22	69.70	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	3.4e-22	70.15	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	7.5e-22	69.70	SAUR-like auxin-responsive protein family	[more]
AT5G18050.1	9.8e-22	68.18	SAUR-like auxin-responsive protein family	[more]
AT5G18030.1	1.7e-21	68.18	SAUR-like auxin-responsive protein family	[more]

BLAST of Cucsa.169390 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700206764\|gb\|KGN61883.1\|	1.2e-32	100.00	hypothetical protein Csa_2G258790 [Cucumis sativus]	[more]
gi\|700206757\|gb\|KGN61876.1\|	1.3e-28	90.14	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	2.3e-28	90.14	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	8.6e-28	88.73	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778669593\|ref\|XP_011649273.1\|	1.9e-27	87.32	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.169390.1	Cucsa.169390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 3..66 score: 7.1
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 3..71 score: 3.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.169390	Csa2G258790	Cucumber (Chinese Long) v2	cgycuB257
Cucsa.169390	CmoCh20G007830	Cucurbita moschata (Rifu)	cgycmoB0482
Cucsa.169390	CmoCh02G003380	Cucurbita moschata (Rifu)	cgycmoB0483
Cucsa.169390	MELO3C034603.2	Melon (DHL92) v3.6.1	cgymedB294
Cucsa.169390	Cla97C11G210300	Watermelon (97103) v2	cgywmbB305
Cucsa.169390	Bhi10G001519	Wax gourd	cgywgoB348

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.169390	Cucumber (Chinese Long) v3	cgycucB270
Cucsa.169390	Watermelon (97103) v2	cgywmbB304
Cucsa.169390	Cucumber (Gy14) v1	cgycgyB107
Cucsa.169390	Cucurbita maxima (Rimu)	cgycmaB0479
Cucsa.169390	Cucurbita maxima (Rimu)	cgycmaB0480
Cucsa.169390	Wild cucumber (PI 183967)	cgycpiB265
Cucsa.169390	Wild cucumber (PI 183967)	cgycpiB266
Cucsa.169390	Cucumber (Chinese Long) v2	cgycuB258
Cucsa.169390	Melon (DHL92) v3.5.1	cgymeB301
Cucsa.169390	Melon (DHL92) v3.5.1	cgymeB302
Cucsa.169390	Watermelon (Charleston Gray)	cgywcgB301
Cucsa.169390	Watermelon (97103) v1	cgywmB321
Cucsa.169390	Watermelon (97103) v1	cgywmB323
Cucsa.169390	Cucurbita pepo (Zucchini)	cgycpeB0466
Cucsa.169390	Cucurbita pepo (Zucchini)	cgycpeB0467
Cucsa.169390	Bottle gourd (USVL1VR-Ls)	cgylsiB281