CmoCh02G003380 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh02G003380
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSAUR-like auxin-responsive protein family
LocationCmo_Chr02 : 1733363 .. 1733656 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTATGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

mRNA sequence

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTATGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCTTTGGTTCCTCATGCCAAGCAAATTCTAAAGATGCAGTCAAGTTTTACCAAAAACCAGTTGGACGTTCCAAAAGGTCATGTGGCTGTTTATGTAGGAGAGATCCAACGGAAGCGGTTCGTGGTTCCGATATCTTACCTAAACCATCCATCGTTCCAGAAACTGCTCAGCCACGCCGAGGAGGAGTTTGGCTTCCATCATCCACAAGGGGGCCTAACAATTCCTTGCAGAGAAGATGCCTTCGTTGATCTCACTTCTAGATTGCAAGTTTCTTGA
Homology
[Close]
BLAST of CmoCh02G003380 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 48/66 (72.73%), Postives = 57/66 (86.36%), Query Frame = 1 

Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVD 89
          PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +EEEFGF HP GGLTIPC ED F++
Sbjct: 25 PKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 84

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 85 VTSRLQ 90

[Close]
BLAST of CmoCh02G003380 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 1 

Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]
BLAST of CmoCh02G003380 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1 

Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]
BLAST of CmoCh02G003380 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-23
Identity = 51/84 (60.71%), Postives = 64/84 (76.19%), Query Frame = 1 

Query: 12 AKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   ++        PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTASA-----APKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCREDAFVDLTSRLQ 96
           HP GGLTIPC ED F+++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 88

[Close]
BLAST of CmoCh02G003380 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-22
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 1 

Query: 17 KMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCREDAFVDLTSRLQ 96
          GLTIPC ED F+++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]
BLAST of CmoCh02G003380 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh02G003380 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.1e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]
BLAST of CmoCh02G003380 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-42
Identity = 83/97 (85.57%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QS F K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPC+EDAF+DLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]
BLAST of CmoCh02G003380 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-42
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG+ LL LVPHAK+ILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSFQ+
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLS AEEEFGFHHP GGLTIPC+EDAFVDLTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]
BLAST of CmoCh02G003380 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.4e-40
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIR LSLVPH KQILKMQS  TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQ+
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPC+EDAFVDLTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]
BLAST of CmoCh02G003380 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 120.9 bits (302), Expect = 4.2e-28
Identity = 58/98 (59.18%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK   S + N + +PKGH+AVYVGE+ Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 KLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          KLL  AEEEFGF HP GGLTIPC E  F+DL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]
BLAST of CmoCh02G003380 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.8 bits (299), Expect = 9.4e-28
Identity = 62/105 (59.05%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPCRE+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]
BLAST of CmoCh02G003380 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + SS + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]
BLAST of CmoCh02G003380 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 60/108 (55.56%), Postives = 76/108 (70.37%), Query Frame = 1 

Query: 1   MGIRLLSLVPHAKQILKMQSSFTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQV 97
           PISYLNHP F++ L+ AEEE GFHH  GGLTIPCRE++F+ L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]
BLAST of CmoCh02G003380 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25
Identity = 63/92 (68.48%), Postives = 68/92 (73.91%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQ--RKRFVVPISYLNHPSF 60
          M IRL S V ++KQ  K QS        VPKGHVAVYVGE    +KRFVVPISYLNHPSF
Sbjct: 1  MAIRL-SRVINSKQSQKQQSR-------VPKGHVAVYVGEEMESKKRFVVPISYLNHPSF 60

Query: 61 QKLLSHAEEEFGFHHPQGGLTIPCREDAFVDL 91
          Q LLS AEEEFGF+HP GGLTIPCRE+ FV L
Sbjct: 61 QGLLSRAEEEFGFNHPIGGLTIPCREETFVGL 84

[Close]
BLAST of CmoCh02G003380 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 8.0e-45
Identity = 89/97 (91.75%), Postives = 94/97 (96.91%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQ+LKMQS FTKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPC+ED F+DLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]
BLAST of CmoCh02G003380 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh02G003380 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 182.2 bits (461), Expect = 4.4e-43
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPC+EDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]
BLAST of CmoCh02G003380 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 5.7e-43
Identity = 87/97 (89.69%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQS FTKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL+ AEEEFGFHHP GGLTIPC+EDAFVDLTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh02G003380 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 83/97 (85.57%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QS F K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCREDAFVDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPC+EDAF+DLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

The following BLAST results are available for this feature:
BLAST of CmoCh02G003380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAU24_ARATH2.3e-2372.73Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1[more]
SAU20_ARATH3.0e-2364.56Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1[more]
SAU22_ARATH3.0e-2363.29Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1[more]
SAU21_ARATH8.6e-2360.71Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1[more]
SAU19_ARATH1.1e-2263.29Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1[more]
BLAST of CmoCh02G003380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPI0_CUCSA2.1e-4491.75Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1[more]
A0A0A0LLF1_CUCSA3.1e-4387.63Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1[more]
A0A0A0LIZ9_CUCSA1.2e-4285.57Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1[more]
A0A0A0LJ99_CUCSA2.0e-4287.63Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1[more]
A0A0A0LJA3_CUCSA2.4e-4086.60Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1[more]
BLAST of CmoCh02G003380 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G21210.14.2e-2859.18 SAUR-like auxin-responsive protein family [more]
AT4G34810.19.4e-2859.05 SAUR-like auxin-responsive protein family [more]
AT4G38840.12.7e-2759.79 SAUR-like auxin-responsive protein family [more]
AT4G34790.11.5e-2555.56 SAUR-like auxin-responsive protein family [more]
AT4G34800.13.4e-2568.48 SAUR-like auxin-responsive protein family [more]
BLAST of CmoCh02G003380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115596|ref|XP_008457635.1|8.0e-4591.75PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|700206757|gb|KGN61876.1|3.0e-4491.75hypothetical protein Csa_2G258720 [Cucumis sativus][more]
gi|778674175|ref|XP_011650154.1|4.4e-4387.63PREDICTED: auxin-induced protein 15A-like [Cucumis sativus][more]
gi|659115592|ref|XP_008457632.1|5.7e-4389.69PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|700206761|gb|KGN61880.1|1.7e-4285.57hypothetical protein Csa_2G258760 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh02G003380.1CmoCh02G003380.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 13..93
score: 7.5
NoneNo IPR availablePANTHERPTHR31929FAMILY NOT NAMEDcoord: 2..97
score: 7.2
NoneNo IPR availablePANTHERPTHR31929:SF13SUBFAMILY NOT NAMEDcoord: 2..97
score: 7.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh02G003380Cucsa.381970Cucumber (Gy14) v1cgycmoB1053
CmoCh02G003380Cucsa.169390Cucumber (Gy14) v1cgycmoB0483
CmoCh02G003380Cla015862Watermelon (97103) v1cmowmB580
CmoCh02G003380MELO3C013386Melon (DHL92) v3.5.1cmomeB552
CmoCh02G003380MELO3C034603.2Melon (DHL92) v3.6.1cmomedB606
CmoCh02G003380Cla97C11G210300Watermelon (97103) v2cmowmbB587
CmoCh02G003380Bhi10G001519Wax gourdcmowgoB0736
CmoCh02G003380CsGy7G000460Cucumber (Gy14) v2cgybcmoB944
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh02G003380CmoCh20G007870Cucurbita moschata (Rifu)cmocmoB404
CmoCh02G003380CmoCh20G007960Cucurbita moschata (Rifu)cmocmoB416
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh02G003380Cucurbita pepo (Zucchini)cmocpeB575
CmoCh02G003380Cucurbita pepo (Zucchini)cmocpeB595
CmoCh02G003380Bottle gourd (USVL1VR-Ls)cmolsiB533
CmoCh02G003380Cucumber (Gy14) v2cgybcmoB220
CmoCh02G003380Silver-seed gourdcarcmoB0436
CmoCh02G003380Cucumber (Chinese Long) v3cmocucB0687
CmoCh02G003380Cucurbita moschata (Rifu)cmocmoB388
CmoCh02G003380Cucurbita maxima (Rimu)cmacmoB554
CmoCh02G003380Cucurbita maxima (Rimu)cmacmoB619
CmoCh02G003380Wild cucumber (PI 183967)cmocpiB582
CmoCh02G003380Wild cucumber (PI 183967)cmocpiB644
CmoCh02G003380Cucumber (Chinese Long) v2cmocuB577
CmoCh02G003380Cucumber (Chinese Long) v2cmocuB633
CmoCh02G003380Melon (DHL92) v3.5.1cmomeB527
CmoCh02G003380Watermelon (Charleston Gray)cmowcgB515
CmoCh02G003380Watermelon (Charleston Gray)cmowcgB530
CmoCh02G003380Watermelon (97103) v1cmowmB603