CmoCh20G007960 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G007960
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSAUR-like auxin-responsive protein family
LocationCmo_Chr20 : 3937286 .. 3937579 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTATCACTAAAAGTCAGTTGGATGTTCCAAAAGGTCATGTAGCCGTGTATGTGGGAGAGATCCAAAGGAAGAGATTCGTGGTTCCAATATCATACTTGAACCACCCATCATTCCAGCAACTGCTCAGCCGTGCAGAGGAAGAGTTTGGCTTCCATCATCCGCAGGGCGCTCTAACTATTCCTTGCAAAGAGGATGCCTTTATTAATCTTACTTCAAGATTGCAAGTCTCTTGA

mRNA sequence

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTATCACTAAAAGTCAGTTGGATGTTCCAAAAGGTCATGTAGCCGTGTATGTGGGAGAGATCCAAAGGAAGAGATTCGTGGTTCCAATATCATACTTGAACCACCCATCATTCCAGCAACTGCTCAGCCGTGCAGAGGAAGAGTTTGGCTTCCATCATCCGCAGGGCGCTCTAACTATTCCTTGCAAAGAGGATGCCTTTATTAATCTTACTTCAAGATTGCAAGTCTCTTGA

Coding sequence (CDS)

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAAATCCTAAAGATGCAGTCAGGTATCACTAAAAGTCAGTTGGATGTTCCAAAAGGTCATGTAGCCGTGTATGTGGGAGAGATCCAAAGGAAGAGATTCGTGGTTCCAATATCATACTTGAACCACCCATCATTCCAGCAACTGCTCAGCCGTGCAGAGGAAGAGTTTGGCTTCCATCATCCGCAGGGCGCTCTAACTATTCCTTGCAAAGAGGATGCCTTTATTAATCTTACTTCAAGATTGCAAGTCTCTTGA
Homology
[Close]
BLAST of CmoCh20G007960 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-24
Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 1 

Query: 12 AKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGALTIPCKEDAFINLTSRLQ 96
           HP G LTIPC ED FIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]
BLAST of CmoCh20G007960 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.8e-24
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 1 

Query: 17 KMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS++EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 ALTIPCKEDAFINLTSRLQ 96
           LTIPC ED FIN+TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]
BLAST of CmoCh20G007960 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 52/84 (61.90%), Postives = 64/84 (76.19%), Query Frame = 1 

Query: 12 AKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGF 71
          AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++E+EFGF
Sbjct: 10 AKKILSRSTAAVSA---APKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 69

Query: 72 HHPQGALTIPCKEDAFINLTSRLQ 96
           HP G LTIPC ED FIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]
BLAST of CmoCh20G007960 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1 

Query: 17 KMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS++EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 ALTIPCKEDAFINLTSRLQ 96
           LTIPC ED FIN+TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]
BLAST of CmoCh20G007960 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-23
Identity = 52/83 (62.65%), Postives = 63/83 (75.90%), Query Frame = 1 

Query: 12 AKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGF 71
          AK+IL   +    +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGALTIPCKEDAFINLTSRL 95
           HP G LTIPC ED FIN+TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]
BLAST of CmoCh20G007960 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-42
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+ KQILK+QSG  K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LL+ +EEEFGFHHPQGALTIPCKEDAFI+LTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]
BLAST of CmoCh20G007960 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-42
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILK+QSG+TK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LL  AEEEFGFHHPQG LTIPCKEDAF  +TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]
BLAST of CmoCh20G007960 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 4.4e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG RLLSLVPHAKQILKMQSG TK+QL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LLS AEEEFGFHHP G LTIPCKEDAF++LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh20G007960 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 1.9e-40
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG+ LL LVPHAK+ILKMQS  TK+QLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LLSRAEEEFGFHHP G LTIPCKEDAF++LTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]
BLAST of CmoCh20G007960 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.4e-40
Identity = 84/97 (86.60%), Postives = 88/97 (90.72%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVPH KQILKMQSG+TK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LLS AEEEFGFHHPQG LTIPCKEDAF++LTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]
BLAST of CmoCh20G007960 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-26
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILK----MQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSRAEEEFGFHHPQGALTIPCKEDAFINLTSR 94
          SFQ LL +AEEEFGF HP G LTIPC E+ FI+L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]
BLAST of CmoCh20G007960 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 1 

Query: 1   MGIRLLSLVPHAKQILKMQSGITKSQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +++        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLSRAEEEFGFHHPQGALTIPCKEDAFINL-TSRLQ 96
           +LNHPSF++ LSRAEEEFGF+HP G LTIPC+E+ F++L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]
BLAST of CmoCh20G007960 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 8.8e-26
Identity = 55/98 (56.12%), Postives = 74/98 (75.51%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE+ Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLSH-SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          +LL +AEEEFGF HP G LTIPC E  FI+L SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]
BLAST of CmoCh20G007960 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.2 bits (282), Expect = 8.8e-26
Identity = 54/84 (64.29%), Postives = 65/84 (77.38%), Query Frame = 1 

Query: 12 AKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGALTIPCKEDAFINLTSRLQ 96
           HP G LTIPC ED FIN+TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]
BLAST of CmoCh20G007960 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.9 bits (276), Expect = 4.4e-25
Identity = 52/79 (65.82%), Postives = 61/79 (77.22%), Query Frame = 1 

Query: 17 KMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLSRAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR++VPISYLN PSFQ LLS++EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 ALTIPCKEDAFINLTSRLQ 96
           LTIPC ED FIN+TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]
BLAST of CmoCh20G007960 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 3.4e-43
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQ+LKMQSG TK+QLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LLS AEEEFGFHHPQG LTIPCKED F++LTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]
BLAST of CmoCh20G007960 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-42
Identity = 85/97 (87.63%), Postives = 92/97 (94.85%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+ KQILK+QSG  K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LL+ +EEEFGFHHPQGALTIPCKEDAFI+LTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]
BLAST of CmoCh20G007960 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 179.1 bits (453), Expect = 3.7e-42
Identity = 86/97 (88.66%), Postives = 93/97 (95.88%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILKMQSG TK++L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LL+RAEEEFGFHHP G LTIPCKEDAF++LTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]
BLAST of CmoCh20G007960 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42
Identity = 85/97 (87.63%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVPHAKQILK+QSG+TK+QLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LL  AEEEFGFHHPQG LTIPCKEDAF  +TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]
BLAST of CmoCh20G007960 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 178.3 bits (451), Expect = 6.3e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1 

Query: 1  MGIRLLSLVPHAKQILKMQSGITKSQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG RLLSLVPHAKQILKMQSG TK+QL+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPQGALTIPCKEDAFINLTSRLQVS 98
          LLS AEEEFGFHHP G LTIPCKEDAF++LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

The following BLAST results are available for this feature:
BLAST of CmoCh20G007960 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAU24_ARATH1.6e-2464.29Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1[more]
SAU20_ARATH7.8e-2465.82Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1[more]
SAU22_ARATH1.3e-2361.90Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1[more]
SAU19_ARATH3.0e-2364.56Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1[more]
SAU23_ARATH3.0e-2362.65Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1[more]
BLAST of CmoCh20G007960 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIZ9_CUCSA2.6e-4287.63Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1[more]
A0A0A0LLF1_CUCSA3.4e-4287.63Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1[more]
A0A0A0LPI0_CUCSA4.4e-4288.66Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1[more]
A0A0A0LJ99_CUCSA1.9e-4084.54Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1[more]
A0A0A0LJA3_CUCSA5.4e-4086.60Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1[more]
BLAST of CmoCh20G007960 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38840.12.3e-2658.76 SAUR-like auxin-responsive protein family [more]
AT4G34810.15.2e-2656.19 SAUR-like auxin-responsive protein family [more]
AT2G21210.18.8e-2656.12 SAUR-like auxin-responsive protein family [more]
AT5G18080.18.8e-2664.29 SAUR-like auxin-responsive protein family [more]
AT5G18020.14.4e-2565.82 SAUR-like auxin-responsive protein family [more]
BLAST of CmoCh20G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115596|ref|XP_008457635.1|3.4e-4390.72PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|700206761|gb|KGN61880.1|3.7e-4287.63hypothetical protein Csa_2G258760 [Cucumis sativus][more]
gi|659115592|ref|XP_008457632.1|3.7e-4288.66PREDICTED: auxin-induced protein 15A-like [Cucumis melo][more]
gi|778674175|ref|XP_011650154.1|4.8e-4287.63PREDICTED: auxin-induced protein 15A-like [Cucumis sativus][more]
gi|700206757|gb|KGN61876.1|6.3e-4288.66hypothetical protein Csa_2G258720 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G007960.1CmoCh20G007960.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 13..93
score: 1.0
NoneNo IPR availablePANTHERPTHR31929FAMILY NOT NAMEDcoord: 1..97
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G007960Cucsa.169420Cucumber (Gy14) v1cgycmoB0482
CmoCh20G007960Cucsa.381980Cucumber (Gy14) v1cgycmoB1052
CmoCh20G007960CmaCh02G003520Cucurbita maxima (Rimu)cmacmoB606
CmoCh20G007960Cla016631Watermelon (97103) v1cmowmB534
CmoCh20G007960Csa2G258740Cucumber (Chinese Long) v2cmocuB531
CmoCh20G007960MELO3C020765Melon (DHL92) v3.5.1cmomeB484
CmoCh20G007960MELO3C013387Melon (DHL92) v3.5.1cmomeB503
CmoCh20G007960CSPI02G12970Wild cucumber (PI 183967)cmocpiB536
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh20G007960CmoCh02G003450Cucurbita moschata (Rifu)cmocmoB404
CmoCh20G007960CmoCh02G003380Cucurbita moschata (Rifu)cmocmoB416
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G007960Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G007960Cucurbita pepo (Zucchini)cmocpeB521
CmoCh20G007960Cucurbita pepo (Zucchini)cmocpeB534
CmoCh20G007960Bottle gourd (USVL1VR-Ls)cmolsiB489
CmoCh20G007960Bottle gourd (USVL1VR-Ls)cmolsiB491
CmoCh20G007960Cucumber (Gy14) v2cgybcmoB209
CmoCh20G007960Melon (DHL92) v3.6.1cmomedB559
CmoCh20G007960Cucumber (Chinese Long) v3cmocucB0635
CmoCh20G007960Cucumber (Chinese Long) v3cmocucB0637
CmoCh20G007960Watermelon (97103) v2cmowmbB544
CmoCh20G007960Wax gourdcmowgoB0673
CmoCh20G007960Wax gourdcmowgoB0679
CmoCh20G007960Cucumber (Gy14) v1cgycmoB1051
CmoCh20G007960Cucurbita maxima (Rimu)cmacmoB551
CmoCh20G007960Wild cucumber (PI 183967)cmocpiB567
CmoCh20G007960Cucumber (Chinese Long) v2cmocuB561
CmoCh20G007960Watermelon (Charleston Gray)cmowcgB476