CSPI02G12970 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G12970
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	SAUR-like auxin-responsive protein family
Location	Chr2 : 13140249 .. 13140614 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTCTTCTACTTGCTTCTGTACCAATCTGAACAAAACTTCAAATCTTTCTTAGTCTTTCATCATAACACAAATGGGGGTTCCATTACTATGTTTGGTTCCTCATGCAAAGAAAATCTTGAAGATGCAGTCAAGTTTTACCAAAAACCAACTGGATGTTCCAAAAGGCCATGTGGCGGTTTACGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGGTATCTTACTTAAACGATCCATCGTTCCAACAACTGCTCAGCCGTGCAGAGGAAGAGTTTGGCTTCCACCATCCCCATGGGGGTCTAACAATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTAAAAGTAGCTTGA

mRNA sequence

ATGGGGGTTCCATTACTATGTTTGGTTCCTCATGCAAAGAAAATCTTGAAGATGCAGTCAAGTTTTACCAAAAACCAACTGGATGTTCCAAAAGGCCATGTGGCGGTTTACGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGGTATCTTACTTAAACGATCCATCGTTCCAACAACTGCTCAGCCGTGCAGAGGAAGAGTTTGGCTTCCACCATCCCCATGGGGGTCTAACAATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTAAAAGTAGCTTGA

Coding sequence (CDS)

ATGGGGGTTCCATTACTATGTTTGGTTCCTCATGCAAAGAAAATCTTGAAGATGCAGTCAAGTTTTACCAAAAACCAACTGGATGTTCCAAAAGGCCATGTGGCGGTTTACGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGGTATCTTACTTAAACGATCCATCGTTCCAACAACTGCTCAGCCGTGCAGAGGAAGAGTTTGGCTTCCACCATCCCCATGGGGGTCTAACAATTCCTTGCAAAGAAGATGCCTTTGTTGATCTCACTTCTAGATTAAAAGTAGCTTGA

Homology

[Close]

BLAST of CSPI02G12970 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.7e-24
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGF 71
          AKKIL   S  T      PKG +AVYVGE Q+KR++VPVSYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLK 96
           HP GGLTIPC ED F+++TSRL+
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12970 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.0e-24
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 12 AKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGF 71
          AKKIL   S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKIL---SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLK 96
           HP GGLTIPC ED F+++TSR +
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CSPI02G12970 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 52/83 (62.65%), Postives = 64/83 (77.11%), Query Frame = 1


Query: 12 AKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGF 71
          AKKIL   ++        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRL 95
           HP GGLTIPC ED F+++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CSPI02G12970 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGF 71
          AKKIL   ++        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++E+EFGF
Sbjct: 10 AKKILSRSTAAVSA---APKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLK 96
           HP GGLTIPC ED F+++TSRL+
Sbjct: 70 DHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12970 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 53/84 (63.10%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGF 71
          AKKIL   S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LLS++EEEFGF
Sbjct: 10 AKKIL---SRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLK 96
           HP GGLTIPC ED F+++TSRL+
Sbjct: 70 AHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12970 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 7.6e-50
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CSPI02G12970 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-44
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG  LL LVPHAK+ILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12970 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.5e-39
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG+ LL LVPHAK+ILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LL  AEEEFGFHHP GGLTIPCKEDAF ++TS+L+ +
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CSPI02G12970 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-38
Identity = 79/97 (81.44%), Postives = 85/97 (87.63%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG+  L LVPH K+ILKMQS  TK QL VPKGHVAVYVGEIQ KRFVVP+SYLND SFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LLS AEEEFGFHHP GGLTIPCKEDAFVDLTS+L+V+
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CSPI02G12970 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-38
Identity = 75/97 (77.32%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG+ LL LVP+ K+ILK+QS F K QLDVPKGHVA+YVGEIQRKRFVVP+SYLN PSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LL+ +EEEFGFHHP G LTIPCKEDAF+DLTSRL+++
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CSPI02G12970 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-26
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILK----MQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDP 60
          M + +  ++  +K+IL+    + SS + + LDVPKG++AVYVGE   KRFVVPVSYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSR 94
          SFQ LL +AEEEFGF HP GGLTIPC E+ F+DL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CSPI02G12970 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 1


Query: 1   MGVPLLCLVPHAKKILKMQSSFTKNQLD------VPKGHVAVYVGE---IQRKRFVVPVS 60
           MG+    +    K+ILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVP+S
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNDPSFQQLLSRAEEEFGFHHPHGGLTIPCKEDAFVDL-TSRLK 96
           +LN PSF++ LSRAEEEFGF+HP GGLTIPC+E+ F+DL  SRL+
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CSPI02G12970 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGF 71
          AKKIL   S  T      PKG +AVYVGE Q+KR++VPVSYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKIL---SRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLK 96
           HP GGLTIPC ED F+++TSRL+
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12970 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEI-QRKRFVVPVSYLNDPSFQ 60
          M + +  ++  +K++LK   S + N + +PKGH+AVYVGE+ Q++RFVVPV+YL+ P FQ
Sbjct: 1  MAIRISRVLQSSKQLLK-SLSHSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          +LL +AEEEFGF HP GGLTIPC E  F+DL SRL  +
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CSPI02G12970 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.3 bits (277), Expect = 3.4e-25
Identity = 53/84 (63.10%), Postives = 64/84 (76.19%), Query Frame = 1


Query: 12 AKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQLLSRAEEEFGF 71
          AKKIL   S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LLS++EEEFGF
Sbjct: 10 AKKIL---SRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPHGGLTIPCKEDAFVDLTSRLK 96
           HP GGLTIPC ED F+++TSR +
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CSPI02G12970 vs. NCBI nr
Match: gi|778669593|ref|XP_011649273.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CSPI02G12970 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-44
Identity = 87/97 (89.69%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG+ LL LVPHAK+ILKMQS FTKN+L+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LL+RAEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12970 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 3.1e-44
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG  LL LVPHAK+ILKMQS FTKNQL+VPKGHVAVYVGEIQRKRFVVP+SYLNDPSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LLS AEEEFGFHHPHGGLTIPCKEDAFVDLTSRL+VA
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12970 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 176.0 bits (445), Expect = 3.2e-41
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG+ LL LVPHAK++LKMQS FTKNQLDVPKGHVAVYVGEIQ KRFVVP+SYLN PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LLS AEEEFGFHHP GGLTIPCKED F+DLTSRL+V+
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CSPI02G12970 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-39
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60
          MG+ LL LVPHAK+ILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 98
          LL  AEEEFGFHHP GGLTIPCKEDAF ++TS+L+ +
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

The following BLAST results are available for this feature:

BLAST of CSPI02G12970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	2.7e-24	65.48	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	6.0e-24	63.10	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU23_ARATH	1.0e-23	62.65	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]
SAU22_ARATH	1.3e-23	60.71	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	2.3e-23	63.10	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CSPI02G12970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ99_CUCSA	7.6e-50	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	2.1e-44	90.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	3.5e-39	79.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.3e-38	81.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	1.3e-38	77.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]

BLAST of CSPI02G12970 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38840.1	1.1e-26	57.73	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	5.2e-26	55.24	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	1.5e-25	65.48	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.0e-25	54.08	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	3.4e-25	63.10	SAUR-like auxin-responsive protein family	[more]

BLAST of CSPI02G12970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778669593\|ref\|XP_011649273.1\|	1.1e-49	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	1.8e-44	89.69	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	3.1e-44	90.72	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	3.2e-41	84.54	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	5.1e-39	79.38	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G12970.1	CSPI02G12970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..93 score: 3.0
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.6
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G12970	Cla015862	Watermelon (97103) v1	cpiwmB150
CSPI02G12970	Cla016626	Watermelon (97103) v1	cpiwmB157
CSPI02G12970	Csa7G009050	Cucumber (Chinese Long) v2	cpicuB094
CSPI02G12970	MELO3C020767	Melon (DHL92) v3.5.1	cpimeB097
CSPI02G12970	MELO3C013390	Melon (DHL92) v3.5.1	cpimeB102
CSPI02G12970	CmoCh20G007960	Cucurbita moschata (Rifu)	cmocpiB536

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G12970	Wild cucumber (PI 183967)	cpicpiB089
CSPI02G12970	Cucumber (Gy14) v1	cgycpiB265
CSPI02G12970	Cucurbita maxima (Rimu)	cmacpiB441
CSPI02G12970	Cucurbita maxima (Rimu)	cmacpiB547
CSPI02G12970	Cucurbita maxima (Rimu)	cmacpiB593
CSPI02G12970	Cucurbita moschata (Rifu)	cmocpiB429
CSPI02G12970	Cucurbita moschata (Rifu)	cmocpiB500
CSPI02G12970	Cucurbita moschata (Rifu)	cmocpiB582
CSPI02G12970	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G12970	Melon (DHL92) v3.5.1	cpimeB123
CSPI02G12970	Watermelon (Charleston Gray)	cpiwcgB111
CSPI02G12970	Watermelon (Charleston Gray)	cpiwcgB131
CSPI02G12970	Cucurbita pepo (Zucchini)	cpecpiB269
CSPI02G12970	Cucurbita pepo (Zucchini)	cpecpiB542
CSPI02G12970	Cucurbita pepo (Zucchini)	cpecpiB668
CSPI02G12970	Cucurbita pepo (Zucchini)	cpecpiB706
CSPI02G12970	Bottle gourd (USVL1VR-Ls)	cpilsiB091
CSPI02G12970	Melon (DHL92) v3.6.1	cpimedB087
CSPI02G12970	Melon (DHL92) v3.6.1	cpimedB089
CSPI02G12970	Cucumber (Gy14) v2	cgybcpiB056
CSPI02G12970	Cucumber (Gy14) v2	cgybcpiB062
CSPI02G12970	Cucumber (Gy14) v2	cgybcpiB303
CSPI02G12970	Silver-seed gourd	carcpiB0347
CSPI02G12970	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G12970	Watermelon (97103) v2	cpiwmbB112
CSPI02G12970	Wax gourd	cpiwgoB181