Csa2G258700 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa2G258700
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-induced SAUR-like protein; contains IPR003676 (Auxin responsive SAUR protein)
Location	Chr2 : 12566233 .. 12566729 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCCAAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCAATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGAAGGATGAAGAAAAAATGGCAATATTTCATTTTTTGACCATTTGTTTTTCAAAATTTTCTCTATTCACTTGCCTTTTGACTTGCAAGAGAATATACTCCATTGTTAGCCATAGCCTATAAATGAGTAGCATTGTAAAGTACTGTTTACCAACAAAAGTAGATGTATGCACATACAGCAACAATTCAGAATCAATTCCCATGTAG

mRNA sequence

ATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCCAAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCAATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGA

Coding sequence (CDS)

ATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCCAAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCAATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGA

Protein sequence

MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS*

Homology

[Close]

BLAST of Csa2G258700 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-21
Identity = 50/84 (59.52%), Postives = 59/84 (70.24%), Query Frame = 1


Query: 12 AKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSF+ LL  +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFTEITSKLQ 96
           HP GGLTIPC ED F  +TS+LQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258700 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-21
Identity = 49/79 (62.03%), Postives = 55/79 (69.62%), Query Frame = 1


Query: 17 KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VPISYLN PSF+ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFTEITSKLQ 96
          GLTIPC ED F  +TS+ Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Csa2G258700 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 6.2e-21
Identity = 48/79 (60.76%), Postives = 56/79 (70.89%), Query Frame = 1


Query: 17 KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VP+SYLN PSF+ LL  +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFTEITSKLQ 96
          GLTIPC ED F  +TS+LQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258700 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 8.1e-21
Identity = 52/96 (54.17%), Postives = 62/96 (64.58%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG RL    P  ++ L  ++  +   LD PKG++AVYVGE   KRFV+P+S+LN P F+ 
Sbjct: 1  MGFRL----PGIRKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPLFQD 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQA 97
          LL  AEEEFG+ HP GGLTIPC ED F  ITS L A
Sbjct: 61 LLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSA 91

[Close]

BLAST of Csa2G258700 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-20
Identity = 48/79 (60.76%), Postives = 56/79 (70.89%), Query Frame = 1


Query: 17 KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSF+ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFTEITSKLQ 96
          GLTIPC ED F  +TS+LQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Csa2G258700 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 1.4e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Csa2G258700 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 3.8e-41
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG RLLSLVPHAKQILK+QSG TKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+Q
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL HAEEEFGFHHP GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Csa2G258700 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.4e-40
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVP+ KQILKIQSG  K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL H+EEEFGFHHPQG LTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Csa2G258700 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 6.0e-39
Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIR LSLVPH KQILK+QSGLTK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SF+Q
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL +AEEEFGFHHPQGGLTIPCKEDAF ++TSKLQ S
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of Csa2G258700 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 5.1e-38
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG+ LL LVPHAK+ILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSF+Q
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL  AEEEFGFHHP GGLTIPCKEDAF ++TS+L+ +
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Csa2G258700 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.8 bits (281), Expect = 1.2e-25
Identity = 59/105 (56.19%), Postives = 73/105 (69.52%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKIQSGLTKNQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTE-ITSKLQ 96
           +LNHPSFK+ L  AEEEFGF+HP GGLTIPC+E+ F + I S+LQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Csa2G258700 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-24
Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFK 60
          M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE+ Q++RFVVP++YL+HP F+
Sbjct: 1  MAIRISRVLQSSKQLLKSLSH-SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          +LL  AEEEFGF HP GGLTIPC E  F ++ S+L  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Csa2G258700 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.2e-24
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILK----IQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSK 94
          SF+ LL  AEEEFGF HP GGLTIPC E+ F ++ S+
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Csa2G258700 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 106.7 bits (265), Expect = 8.3e-24
Identity = 58/107 (54.21%), Postives = 71/107 (66.36%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKIQSGLTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ 96
           PISYLNHP F++ L  AEEE GFHH  GGLTIPC+E++F  + +  Q
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQ 106

[Close]

BLAST of Csa2G258700 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-23
Identity = 63/107 (58.88%), Postives = 68/107 (63.55%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKIQSGL---------TKNQLDVPKGHVAVYVGEI-QRKRFVVPI 60
           MGI+L+ L   AKQ  K+Q  L         T    +VPKGHVAVYVGE   RKRFV+PI
Sbjct: 1   MGIQLIGL-SQAKQ--KLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPI 60

Query: 61  SYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
           SYLNHP F+ LL  AEEEFGF HP GGLTIPC ED FT + S L  S
Sbjct: 61  SYLNHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of Csa2G258700 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 199.9 bits (507), Expect = 2.1e-48
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Csa2G258700 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 8.3e-42
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQ+LK+QSG TKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL +AEEEFGFHHPQGGLTIPCKED F ++TS+LQ S
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Csa2G258700 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 175.3 bits (443), Expect = 5.4e-41
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG RLLSLVPHAKQILK+QSG TKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+Q
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL HAEEEFGFHHP GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Csa2G258700 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 172.6 bits (436), Expect = 3.5e-40
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVP+ KQILKIQSG  K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL H+EEEFGFHHPQG LTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Csa2G258700 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 171.4 bits (433), Expect = 7.8e-40
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQILK+QSG TKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL  AEEEFGFHHP GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

The following BLAST results are available for this feature:

BLAST of Csa2G258700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	2.1e-21	59.52	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	3.6e-21	62.03	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	6.2e-21	60.76	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
ARG7_VIGRR	8.1e-21	54.17	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
SAU19_ARATH	1.4e-20	60.76	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of Csa2G258700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLF1_CUCSA	1.4e-48	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	3.8e-41	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	2.4e-40	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	6.0e-39	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	5.1e-38	79.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]

BLAST of Csa2G258700 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34810.1	1.2e-25	56.19	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	1.7e-24	54.08	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	2.2e-24	54.64	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	8.3e-24	54.21	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	1.4e-23	58.88	SAUR-like auxin-responsive protein family	[more]

BLAST of Csa2G258700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674175\|ref\|XP_011650154.1\|	2.1e-48	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	8.3e-42	86.60	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	5.4e-41	85.57	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	3.5e-40	84.54	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	7.8e-40	84.54	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa2G258700.1	Csa2G258700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..92 score: 2.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 6.6
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 6.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa2G258700	Cla016626	Watermelon (97103) v1	cuwmB155
Csa2G258700	MELO3C020768	Melon (DHL92) v3.5.1	cumeB098
Csa2G258700	Lsi10G004400	Bottle gourd (USVL1VR-Ls)	culsiB093
Csa2G258700	MELO3C034603.2	Melon (DHL92) v3.6.1	cumedB087
Csa2G258700	Cla97C11G210300	Watermelon (97103) v2	cuwmbB110
Csa2G258700	CSPI02G13000	Wild cucumber (PI 183967)	cpicuB065
Csa2G258700	CmaCh02G003470	Cucurbita maxima (Rimu)	cmacuB588
Csa2G258700	CmoCh02G003460	Cucurbita moschata (Rifu)	cmocuB577
Csa2G258700	Cp4.1LG02g08030	Cucurbita pepo (Zucchini)	cpecuB540
Csa2G258700	Carg19375	Silver-seed gourd	carcuB0341

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa2G258700	Cucurbita pepo (Zucchini)	cpecuB704
Csa2G258700	Cucumber (Gy14) v2	cgybcuB056
Csa2G258700	Cucumber (Gy14) v2	cgybcuB295
Csa2G258700	Melon (DHL92) v3.6.1	cumedB089
Csa2G258700	Wax gourd	cuwgoB182
Csa2G258700	Cucumber (Chinese Long) v2	cucuB077
Csa2G258700	Cucumber (Gy14) v1	cgycuB257
Csa2G258700	Cucurbita maxima (Rimu)	cmacuB541
Csa2G258700	Cucurbita maxima (Rimu)	cmacuB542
Csa2G258700	Cucurbita moschata (Rifu)	cmocuB531
Csa2G258700	Watermelon (Charleston Gray)	cuwcgB104
Csa2G258700	Cucurbita pepo (Zucchini)	cpecuB267