Carg19375 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg19375
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Auxin-responsive protein
Location	Cucurbita_argyrosperma_scaffold_096 : 220496 .. 220948 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCACTGGAATCGCTAAATCCAACAACATCCGCCGCATCGTCAGTATCCGCCAGATGCTGCAGCGGTGGCGGAGGAAAGCTCGCGTCACCGCCTCTTCTCGCTCCGCCGGTGATACTCCGTCGGATGTTCCGGCCGGCCATGTCGCCGTCTGCGTCGGAAGTAGTTGTAGACGGTTCGTTGTTCGAGCGACGTACTTGAACCATCCGATCTTCAAGAAGCTTCTGTTGCAAGCCGAAGAAGAGTACGGATTCGCGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAAGAGGTTCTTCGAACCGTTTCCCGGTCCGAGTCTGGTCGGTTCTTGAATCTCCCCGATTTTTGCCGCCGCTGTCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAATCTCGGCCGTTGCTTTTTGACTTCGCCGATAAATCAGTCTGCTAA

mRNA sequence

ATGTCCACTGGAATCGCTAAATCCAACAACATCCGCCGCATCGTCAGTATCCGCCAGATGCTGCAGCGGTGGCGGAGGAAAGCTCGCGTCACCGCCTCTTCTCGCTCCGCCGGTGATACTCCGTCGGATGTTCCGGCCGGCCATGTCGCCGTCTGCGTCGGAAGTAGTTGTAGACGGTTCGTTGTTCGAGCGACGTACTTGAACCATCCGATCTTCAAGAAGCTTCTGTTGCAAGCCGAAGAAGAGTACGGATTCGCGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAAGAGGTTCTTCGAACCGTTTCCCGGTCCGAGTCTGGTCGGTTCTTGAATCTCCCCGATTTTTGCCGCCGCTGTCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAATCTCGGCCGTTGCTTTTTGACTTCGCCGATAAATCAGTCTGCTAA

Coding sequence (CDS)

ATGTCCACTGGAATCGCTAAATCCAACAACATCCGCCGCATCGTCAGTATCCGCCAGATGCTGCAGCGGTGGCGGAGGAAAGCTCGCGTCACCGCCTCTTCTCGCTCCGCCGGTGATACTCCGTCGGATGTTCCGGCCGGCCATGTCGCCGTCTGCGTCGGAAGTAGTTGTAGACGGTTCGTTGTTCGAGCGACGTACTTGAACCATCCGATCTTCAAGAAGCTTCTGTTGCAAGCCGAAGAAGAGTACGGATTCGCGAACCAAGGTCCTCTTGCGATTCCTTGTGACGAGTCGGTTTTCGAAGAGGTTCTTCGAACCGTTTCCCGGTCCGAGTCTGGTCGGTTCTTGAATCTCCCCGATTTTTGCCGCCGCTGTCACGTCGACTCTCCGAGTAGTCTCCTCCGTGAATCTCGGCCGTTGCTTTTTGACTTCGCCGATAAATCAGTCTGCTAA

Protein sequence

MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC

Homology

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BLAST of Carg19375 vs. NCBI nr
Match: XP_023554734.1 (auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 8.7e-79
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSR AGDTPSDVPAGHVAVCVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRCAGDTPSDVPAGHVAVCVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD
Sbjct: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120

Query: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 151
           FCRRCHVDSPSSLLRESRPLLFDFADKSVC
Sbjct: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 150

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BLAST of Carg19375 vs. NCBI nr
Match: XP_022952621.1 (auxin-induced protein 6B-like [Cucurbita moschata])

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLR VSRSESGRFLNLPD
Sbjct: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRIVSRSESGRFLNLPD 120

Query: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 151
           FCRRCHVDSPSSLLRESRPLLFDFADKSVC
Sbjct: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 150

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BLAST of Carg19375 vs. NCBI nr
Match: XP_022969444.1 (auxin-induced protein 6B-like [Cucurbita maxima] >XP_022975447.1 auxin-induced protein 6B-like [Cucurbita maxima])

HSP 1 Score: 301.6 bits (771), Expect = 1.5e-78
Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF
Sbjct: 1   MSTGIVKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD
Sbjct: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120

Query: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSVC 151
           FCRRCHVDSP+SLLRESRPLLFDFADKSVC
Sbjct: 121 FCRRCHVDSPTSLLRESRPLLFDFADKSVC 150

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BLAST of Carg19375 vs. NCBI nr
Match: XP_004144827.1 (PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Cucumis sativus] >KGN43195.1 hypothetical protein Csa_7G007930 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 1.5e-70
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR AGD PSDVPAGHVA+CVGSSCRRF
Sbjct: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VVRATYLNHPIF+KLL QAEEEYGF NQGPLAIPC+ESVFEEVLRTVSRSESGRFLNL D
Sbjct: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120

Query: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSV 150
             RRCHVDSPS LLRESRPLLFDFADKSV
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSV 149

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BLAST of Carg19375 vs. NCBI nr
Match: XP_008448020.1 (PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo])

HSP 1 Score: 271.6 bits (693), Expect = 1.7e-69
Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR A D P+DVPAGHVA+CVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRASDAPTDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VVRAT+LNHPIF+KLLLQAEEEYGF NQGPLAIPC+ESVFEEVLR+VSRSESGRF+NL D
Sbjct: 61  VVRATFLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 120

Query: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSV 150
             RRCHVDSPS LLRESRPLLFDFADKSV
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSV 149

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BLAST of Carg19375 vs. TAIR10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 174.1 bits (440), Expect = 6.5e-44
Identity = 89/155 (57.42%), Postives = 113/155 (72.90%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           M+  + K + IR IV +RQML+RWR KAR+++ SR     PSDVP+GHVAVCVGS CRRF
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRC---VPSDVPSGHVAVCVGSGCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRF--LNL 120
           VVRA+YLNHPI   LL+QAEEE+GFANQGPL IPC+ESVFEE +R +SRS+S R      
Sbjct: 61  VVRASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTC 120

Query: 121 PDFCRRCH----VDSPSSLLRESRPLLFDFADKSV 150
           PD  ++C+    + S   L+ ESRPLL   A+K++
Sbjct: 121 PDDLQKCNGGIKIKSKLDLMIESRPLLHGVAEKAI 152

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BLAST of Carg19375 vs. TAIR10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 168.3 bits (425), Expect = 3.6e-42
Identity = 90/155 (58.06%), Postives = 111/155 (71.61%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           M+ G+ K + IR IV +RQML+RWR +AR+++S       PSDVP+GHVAV VGSSCRRF
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRC--VPSDVPSGHVAVYVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSE---SGRFLN 120
           VVRATYLNHP+ + LL+QAEEE+GF NQGPL IPC+ESVFEE +R +SRS+   S RF  
Sbjct: 61  VVRATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTC 120

Query: 121 LPDFCRRCHV---DSPSSLLRESRPLLFDFADKSV 150
             DF + CHV    S   L  ESRPLL    +K+V
Sbjct: 121 PDDFQKNCHVVGIRSKLDLWIESRPLLHGVTEKAV 153

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BLAST of Carg19375 vs. TAIR10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 161.4 bits (407), Expect = 4.4e-40
Identity = 86/151 (56.95%), Postives = 108/151 (71.52%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           M+ GI K + IR IV +RQML++WR KAR+++  RS    PSDVP+GHVAV VG SCRRF
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRS---VPSDVPSGHVAVYVGRSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VV ATYLNHPI   LL++AEEE+GFANQGPL IPC+ESVFEE +R ++R  S RF    D
Sbjct: 61  VVLATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR--SSRFTCTDD 120

Query: 121 FCRRCH--VDSPSSLLRESRPLLFDFADKSV 150
             +  H  + S   LL ESRPLL   ++K++
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSEKAI 146

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BLAST of Carg19375 vs. TAIR10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-35
Identity = 82/154 (53.25%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 5   IAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRA 64
           + K+N I  +V IRQML++W++KA + +S+    D  SDVP GHVAV VG + RR+VVRA
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSN---NDPVSDVPPGHVAVSVGENRRRYVVRA 60

Query: 65  TYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSR----SESGR----FL 124
            +LNHPIF++LL +AEEEYGFAN GPLAIPCDES+FE+++  V+R    S SGR      
Sbjct: 61  KHLNHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAA 120

Query: 125 NLPDFCRRCHVDSPSSLLRESRPLLFDFADKSVC 151
            L D  R  HV    + + ESRPLL   A+KSVC
Sbjct: 121 TLEDLRRCSHVGLAKNNV-ESRPLLPGIAEKSVC 150

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BLAST of Carg19375 vs. TAIR10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 75.1 bits (183), Expect = 4.1e-14
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 39  DTPSDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDES 98
           + P DVP G++AV VG   RRF++   +L+H +FK LL +AEEEYGF + G L IPC+  
Sbjct: 74  EPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDHSGALTIPCEVE 133

Query: 99  VFEEVLRTV 108
            F+ +L+ +
Sbjct: 134 TFKYLLKCI 142

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BLAST of Carg19375 vs. Swiss-Prot
Match: sp|Q9SA49|SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.8e-12
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 44  VPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEV 103
           VPAGHV V VG    RFVV A  +NHPIF  LL ++ +EYG+A +G L IPC   VFE V
Sbjct: 54  VPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERV 113

Query: 104 LRTV 108
           + T+
Sbjct: 114 VETL 117

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BLAST of Carg19375 vs. Swiss-Prot
Match: sp|O22150|SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.8e-12
Identity = 42/121 (34.71%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 11  IRRIVSIRQMLQRWRRKARVTASSRSA-----GDTPSDVPAGHVAVCVG---SSCRRFVV 70
           +R +  ++   QR ++  R  ++ RSA           VP GH+A+ VG     C R +V
Sbjct: 41  MRPLAKLKSWGQRLKQSFRRRSTRRSAYIPVDHKKADPVPRGHLAIYVGQKDGDCHRVLV 100

Query: 71  RATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPDFC 124
              Y NHP+F +LL +AE+EYGF ++G + IPC  S FE V   ++   S R       C
Sbjct: 101 PIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDFERVKTRIASGSSSRVFPWGRHC 160

[Close]

BLAST of Carg19375 vs. Swiss-Prot
Match: sp|Q9SGU2|SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.3e-12
Identity = 42/101 (41.58%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 17  IRQMLQRWRRKARVT-----ASSRSAGDTPSD-----VPAGHVAVCVGSSCRRFVVRATY 76
           ++Q+++R  R A  T      S    G T  +     VP GHV V VG    RFVV A  
Sbjct: 1   MKQLIRRLSRVADSTQYSLLRSESQRGRTKKEKHKSWVPEGHVPVYVGHEMERFVVNAEL 60

Query: 77  LNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTV 108
           LNHP+F  LL Q+ +EYG+  QG L IPC   VFE +L ++
Sbjct: 61  LNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILESL 101

[Close]

BLAST of Carg19375 vs. Swiss-Prot
Match: sp|O64538|SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.1e-11
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 0


Query: 42  SDVPAGHVAVCVGSSCRRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFE 101
           S VP+GHV V VG    RFVV A  LNHP+F  LL ++ +EYG+  +G L IPC+  VFE
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 102 EVLRTV 108
           +V+ ++
Sbjct: 106 QVVESL 111

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BLAST of Carg19375 vs. Swiss-Prot
Match: sp|O65695|SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 7   KSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRFVVRATY 66
           K++ + +   ++Q+L+R     +           P DVP GH  V VG +  R++V  ++
Sbjct: 6   KTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIVPISF 65

Query: 67  LNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFE 102
           L HP F+ LL +AEEE+GF +   L IPCDE VF+
Sbjct: 66  LTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQ 100

[Close]

BLAST of Carg19375 vs. TrEMBL
Match: tr|A0A0A0K0H1|A0A0A0K0H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 9.9e-71
Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MSTGI KSNNIRRIVSIRQMLQRWR+KARVTASSR AGD PSDVPAGHVA+CVGSSCRRF
Sbjct: 1   MSTGIGKSNNIRRIVSIRQMLQRWRKKARVTASSRRAGDAPSDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VVRATYLNHPIF+KLL QAEEEYGF NQGPLAIPC+ESVFEEVLRTVSRSESGRFLNL D
Sbjct: 61  VVRATYLNHPIFQKLLSQAEEEYGFRNQGPLAIPCEESVFEEVLRTVSRSESGRFLNLQD 120

Query: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSV 150
             RRCHVDSPS LLRESRPLLFDFADKSV
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSV 149

[Close]

BLAST of Carg19375 vs. TrEMBL
Match: tr|A0A1S3BJN8|A0A1S3BJN8_CUCME (auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.1e-69
Identity = 133/149 (89.26%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MSTGIAKSNNIRRIVSIRQMLQRWR+KARVTASSR A D P+DVPAGHVA+CVGSSCRRF
Sbjct: 1   MSTGIAKSNNIRRIVSIRQMLQRWRKKARVTASSRRASDAPTDVPAGHVAICVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           VVRAT+LNHPIF+KLLLQAEEEYGF NQGPLAIPC+ESVFEEVLR+VSRSESGRF+NL D
Sbjct: 61  VVRATFLNHPIFQKLLLQAEEEYGFRNQGPLAIPCEESVFEEVLRSVSRSESGRFMNLQD 120

Query: 121 FCRRCHVDSPSSLLRESRPLLFDFADKSV 150
             RRCHVDSPS LLRESRPLLFDFADKSV
Sbjct: 121 IRRRCHVDSPSGLLRESRPLLFDFADKSV 149

[Close]

BLAST of Carg19375 vs. TrEMBL
Match: tr|A0A2I4E7C7|A0A2I4E7C7_9ROSI (indole-3-acetic acid-induced protein ARG7-like OS=Juglans regia OX=51240 GN=LOC108986945 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.4e-54
Identity = 110/152 (72.37%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MS G+ K NNIRRIV +RQMLQRWR K+R+TAS       PSDVPAGHVAVCVG+SC+RF
Sbjct: 1   MSPGLGKCNNIRRIVRVRQMLQRWRLKSRITASR-----APSDVPAGHVAVCVGTSCKRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSESGRFLNLPD 120
           +VRAT+LNHPIFK+LL+QAEEEYGF+NQGPLAIPCDES+FEE+LR VSRSES RF +L D
Sbjct: 61  IVRATHLNHPIFKRLLVQAEEEYGFSNQGPLAIPCDESLFEEILRVVSRSESARFSSLED 120

Query: 121 FCRRCHVDSPSSL--LRESRPLLFDFADKSVC 151
           F RRCHVD  S L  L ESRPLL   +DKS+C
Sbjct: 121 FQRRCHVDIRSHLDFLGESRPLLRVSSDKSIC 147

[Close]

BLAST of Carg19375 vs. TrEMBL
Match: tr|M5VP66|M5VP66_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G082200 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.0e-52
Identity = 112/155 (72.26%), Postives = 122/155 (78.71%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRSAGDTPSDVPAGHVAVCVGSSCRRF 60
           MS  I+K N IRRIV IRQMLQ W +KAR+ A+       PSDVPAGHVAVCVGSSCRRF
Sbjct: 1   MSPAISKCNKIRRIVRIRQMLQSWHKKARLAAAR-----APSDVPAGHVAVCVGSSCRRF 60

Query: 61  VVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSE---SGRFLN 120
           +VRATYLNHPIF+KLL+QAEEEYGFANQGPL IPCDES FEEVLR V+RSE   SGRFL+
Sbjct: 61  IVRATYLNHPIFQKLLVQAEEEYGFANQGPLTIPCDESFFEEVLRVVARSESSNSGRFLS 120

Query: 121 LPDFCRRCHVDSPSSL--LRESRPLLFDFADKSVC 151
           + D  RRCHVD  S L  L ESRPLL   ADKSVC
Sbjct: 121 IDDLQRRCHVDVLSQLEYLGESRPLLHGLADKSVC 150

[Close]

BLAST of Carg19375 vs. TrEMBL
Match: tr|A0A2R6RHJ7|A0A2R6RHJ7_ACTCH (Auxin-responsive protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc07103 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 109/158 (68.99%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 1   MSTGIAKSNNIRRIVSIRQMLQRWRRKARVTASSRS---AGDTPSDVPAGHVAVCVGSSC 60
           M+  I K N IR IV IRQML+RWR+KA  +AS+     AG  PSDVPAGHVA+CVGS C
Sbjct: 1   MAPAIEKHNKIRHIVRIRQMLRRWRKKASASASASGRIPAGRVPSDVPAGHVAICVGSEC 60

Query: 61  RRFVVRATYLNHPIFKKLLLQAEEEYGFANQGPLAIPCDESVFEEVLRTVSRSE---SGR 120
           RRFVVRATYLNHPIFK+LL QAEEEYGFAN+GPLA+PCDESVFEE+LR VSR+E   SGR
Sbjct: 61  RRFVVRATYLNHPIFKRLLAQAEEEYGFANRGPLALPCDESVFEEILRVVSRAESSNSGR 120

Query: 121 FLNLPDFCRRCHVDSPSSL--LRESRPLLFDFADKSVC 151
           F+NL DF R CHV   ++L  L ES PLL  F+DKSVC
Sbjct: 121 FVNLEDFQRCCHVGHRNNLDGLGESGPLLGVFSDKSVC 158

The following BLAST results are available for this feature:

BLAST of Carg19375 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023554734.1	8.7e-79	99.33	auxin-induced protein 6B-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952621.1	1.1e-78	99.33	auxin-induced protein 6B-like [Cucurbita moschata]	[more]
XP_022969444.1	1.5e-78	98.67	auxin-induced protein 6B-like [Cucurbita maxima] >XP_022975447.1 auxin-induced p...	[more]
XP_004144827.1	1.5e-70	91.28	PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Cucumis sativus] >KGN...	[more]
XP_008448020.1	1.7e-69	89.26	PREDICTED: auxin-responsive protein SAUR36-like [Cucumis melo]	[more]

BLAST of Carg19375 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19840.1	6.5e-44	57.42	SAUR-like auxin-responsive protein family	[more]
AT1G75590.1	3.6e-42	58.06	SAUR-like auxin-responsive protein family	[more]
AT5G10990.1	4.4e-40	56.95	SAUR-like auxin-responsive protein family	[more]
AT4G34750.1	1.1e-35	53.25	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	4.1e-14	46.38	SAUR-like auxin-responsive protein family	[more]

BLAST of Carg19375 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SA49\|SAU41_ARATH	2.8e-12	54.69	Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S...	[more]
sp\|O22150\|SAU36_ARATH	4.8e-12	34.71	Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 S...	[more]
sp\|Q9SGU2\|SAU71_ARATH	6.3e-12	41.58	Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S...	[more]
sp\|O64538\|SAU40_ARATH	1.1e-11	50.00	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]
sp\|O65695\|SAU50_ARATH	1.8e-11	36.84	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]

BLAST of Carg19375 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K0H1\|A0A0A0K0H1_CUCSA	9.9e-71	91.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007930 PE=4 SV=1	[more]
tr\|A0A1S3BJN8\|A0A1S3BJN8_CUCME	1.1e-69	89.26	auxin-responsive protein SAUR36-like OS=Cucumis melo OX=3656 GN=LOC103490329 PE=...	[more]
tr\|A0A2I4E7C7\|A0A2I4E7C7_9ROSI	6.4e-54	72.37	indole-3-acetic acid-induced protein ARG7-like OS=Juglans regia OX=51240 GN=LOC1...	[more]
tr\|M5VP66\|M5VP66_PRUPE	6.0e-52	72.26	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G082200 PE=4 SV=1	[more]
tr\|A0A2R6RHJ7\|A0A2R6RHJ7_ACTCH	1.5e-50	68.99	Auxin-responsive protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg19375-RA	Carg19375-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 18..106 e-value: 7.8E-31 score: 106.0
None	No IPR available	PANTHER	PTHR31374:SF40	F6F9.11 PROTEIN-RELATED	coord: 5..142
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 5..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg19375	Cla015871	Watermelon (97103) v1	carwmB0305
Carg19375	Cla016616	Watermelon (97103) v1	carwmB0307
Carg19375	Csa2G258700	Cucumber (Chinese Long) v2	carcuB0341
Carg19375	Csa7G007930	Cucumber (Chinese Long) v2	carcuB0342
Carg19375	MELO3C013403	Melon (DHL92) v3.5.1	carmeB0321
Carg19375	MELO3C020761	Melon (DHL92) v3.5.1	carmeB0319
Carg19375	ClCG11G003760	Watermelon (Charleston Gray)	carwcgB0307
Carg19375	ClCG02G004420	Watermelon (Charleston Gray)	carwcgB0308
Carg19375	CSPI02G12930	Wild cucumber (PI 183967)	carcpiB0347
Carg19375	CSPI07G00540	Wild cucumber (PI 183967)	carcpiB0348
Carg19375	Cucsa.382140	Cucumber (Gy14) v1	carcgyB0373
Carg19375	CmaCh20G008000	Cucurbita maxima (Rimu)	carcmaB0441
Carg19375	CmaCh02G003550	Cucurbita maxima (Rimu)	carcmaB0442
Carg19375	CmaCh19G007070	Cucurbita maxima (Rimu)	carcmaB0440
Carg19375	CmoCh02G003580	Cucurbita moschata (Rifu)	carcmoB0436
Carg19375	CmoCh19G007160	Cucurbita moschata (Rifu)	carcmoB0433
Carg19375	CmoCh20G008080	Cucurbita moschata (Rifu)	carcmoB0434
Carg19375	Lsi10G004270	Bottle gourd (USVL1VR-Ls)	carlsiB288
Carg19375	Lsi10G004490	Bottle gourd (USVL1VR-Ls)	carlsiB289
Carg19375	Lsi11G011540	Bottle gourd (USVL1VR-Ls)	carlsiB290
Carg19375	Cp4.1LG05g12980	Cucurbita pepo (Zucchini)	carcpeB0440
Carg19375	Cp4.1LG16g02710	Cucurbita pepo (Zucchini)	carcpeB0437
Carg19375	CsGy7G000460	Cucumber (Gy14) v2	carcgybB0326
Carg19375	CsGy2G012900	Cucumber (Gy14) v2	carcgybB0325
Carg19375	MELO3C020761.2	Melon (DHL92) v3.6.1	carmedB0328
Carg19375	MELO3C013403.2	Melon (DHL92) v3.6.1	carmedB0330
Carg19375	CsaV3_7G000560	Cucumber (Chinese Long) v3	carcucB0347
Carg19375	CsaV3_2G015490	Cucumber (Chinese Long) v3	carcucB0346
Carg19375	Cla97C11G210540	Watermelon (97103) v2	carwmbB0323
Carg19375	Cla97C02G031370	Watermelon (97103) v2	carwmbB0324
Carg19375	Bhi05G001528	Wax gourd	carwgoB0397
Carg19375	Bhi10G001540	Wax gourd	carwgoB0401

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg19375	Silver-seed gourd	carcarB342
Carg19375	Cucurbita maxima (Rimu)	carcmaB0443
Carg19375	Cucurbita pepo (Zucchini)	carcpeB0436