CSPI02G12930 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G12930
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	SAUR-like auxin-responsive protein family
Location	Chr2 : 13131032 .. 13131630 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCTCTTCTAGTTGGTTTGGAACCAATCCAATCGAAATCTAAGATATTTTCATAGTCTTTCATCTTAAACAAATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCCAAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCAATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGAAGGATGAAGAAAAAATGGCAATATTTCATTTTTTGACCATTTGTTTTTCAAAATTTTCTCTATTCACTTGCCTTTTGACTTGCAAGAGAATATACTCCATTGTTAGCCATAGACTATAAATGAGTAGCATTGTAAAGTACTGTTTACCAACAAAAGTAGATGTATGCACATACAGCAACAATTCAGAATCAATTCCCATGTAGCTTATTCTTGTCTATACTCTATAGATCC

mRNA sequence

ATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCCAAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCAATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGA

Coding sequence (CDS)

ATGGGGATTCGCTTGCTATCTTTGGTTCCCCATGCCAAGCAAATCCTGAAGATTCAGTCAGGACTTACCAAAAACCAGTTGGATGTTCCAAAAGGGCATGTAGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCAATATCTTACTTAAACCATCCGTCATTCAAACAACTGCTCTGCCACGCAGAAGAAGAGTTCGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAAATCACTTCTAAATTGCAAGCATCTTGA

Homology

[Close]

BLAST of CSPI02G12930 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 1


Query: 12 AKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGF 71
          AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSF+ LL  +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFTEITSKLQ 96
           HP GGLTIPC ED F  +TS+LQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12930 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.3e-22
Identity = 49/79 (62.03%), Postives = 57/79 (72.15%), Query Frame = 1


Query: 17 KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VPISYLN PSF+ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFTEITSKLQ 96
          GLTIPC ED F  +TS+ Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CSPI02G12930 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.3e-22
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 1


Query: 17 KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VP+SYLN PSF+ LL  +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFTEITSKLQ 96
          GLTIPC ED F  +TS+LQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12930 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.3e-21
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG RL    P  ++ L  ++  +   LD PKG++AVYVGE   KRFV+P+S+LN P F+ 
Sbjct: 1  MGFRL----PGIRKTLSARNEASSKVLDAPKGYLAVYVGE-NMKRFVIPVSHLNQPLFQD 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQA 97
          LL  AEEEFG+ HP GGLTIPC ED F  ITS L A
Sbjct: 61 LLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSA 91

[Close]

BLAST of CSPI02G12930 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-21
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 1


Query: 17 KIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQLLCHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSF+ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFTEITSKLQ 96
          GLTIPC ED F  +TS+LQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CSPI02G12930 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CSPI02G12930 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.6e-42
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG RLLSLVPHAKQILK+QSG TKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+Q
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL HAEEEFGFHHP GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12930 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.9e-41
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVP+ KQILKIQSG  K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL H+EEEFGFHHPQG LTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CSPI02G12930 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.2e-39
Identity = 82/97 (84.54%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIR LSLVPH KQILK+QSGLTK QL VPKGHVAVYVGEIQ KRFVVPISYLN  SF+Q
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL +AEEEFGFHHPQGGLTIPCKEDAF ++TSKLQ S
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CSPI02G12930 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-38
Identity = 77/97 (79.38%), Postives = 87/97 (89.69%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG+ LL LVPHAK+ILK+QS  TKNQLDVPKGHVAVYVGEIQRKRFVVP+SYLN PSF+Q
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL  AEEEFGFHHP GGLTIPCKEDAF ++TS+L+ +
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CSPI02G12930 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.2 bits (287), Expect = 2.3e-26
Identity = 59/105 (56.19%), Postives = 75/105 (71.43%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKIQSGLTKNQLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N+        VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTE-ITSKLQ 96
           +LNHPSFK+ L  AEEEFGF+HP GGLTIPC+E+ F + I S+LQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CSPI02G12930 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFK 60
          M IR+  ++  +KQ+LK  S  + N + +PKGH+AVYVGE+ Q++RFVVP++YL+HP F+
Sbjct: 1  MAIRISRVLQSSKQLLKSLSH-SSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          +LL  AEEEFGF HP GGLTIPC E  F ++ S+L  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CSPI02G12930 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 110.5 bits (275), Expect = 5.8e-25
Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILK----IQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSK 94
          SF+ LL  AEEEFGF HP GGLTIPC E+ F ++ S+
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CSPI02G12930 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 109.0 bits (271), Expect = 1.7e-24
Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKIQSGLTKNQLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++P+AKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQ 96
           PISYLNHP F++ L  AEEE GFHH  GGLTIPC+E++F  + +  Q
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQ 106

[Close]

BLAST of CSPI02G12930 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.6 bits (270), Expect = 2.2e-24
Identity = 63/107 (58.88%), Postives = 70/107 (65.42%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKIQSGL---------TKNQLDVPKGHVAVYVGEI-QRKRFVVPI 60
           MGI+L+ L   AKQ  K+Q  L         T    +VPKGHVAVYVGE   RKRFV+PI
Sbjct: 1   MGIQLIGL-SQAKQ--KLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPI 60

Query: 61  SYLNHPSFKQLLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
           SYLNHP F+ LL  AEEEFGF HP GGLTIPC ED FT + S L  S
Sbjct: 61  SYLNHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of CSPI02G12930 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 202.2 bits (513), Expect = 4.1e-49
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CSPI02G12930 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-42
Identity = 84/97 (86.60%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQ+LK+QSG TKNQLDVPKGHVAVYVGEIQ KRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL +AEEEFGFHHPQGGLTIPCKED F ++TS+LQ S
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CSPI02G12930 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 83/97 (85.57%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MG RLLSLVPHAKQILK+QSG TKNQL+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+Q
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL HAEEEFGFHHP GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CSPI02G12930 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 7.1e-41
Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVP+ KQILKIQSG  K QLDVPKGHVA+YVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL H+EEEFGFHHPQG LTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CSPI02G12930 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-40
Identity = 82/97 (84.54%), Postives = 90/97 (92.78%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60
          MGIRLLSLVPHAKQILK+QSG TKN+L+VPKGHVAVYVGEIQRKRFVVPISYLN PSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 98
          LL  AEEEFGFHHP GGLTIPCKEDAF ++TS+LQ +
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

The following BLAST results are available for this feature:

BLAST of CSPI02G12930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	3.3e-22	59.52	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	4.3e-22	62.03	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	7.3e-22	60.76	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
ARG7_VIGRR	1.3e-21	54.17	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 ...	[more]
SAU19_ARATH	1.6e-21	60.76	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]

BLAST of CSPI02G12930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLF1_CUCSA	2.9e-49	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	7.6e-42	85.57	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	4.9e-41	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.2e-39	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	1.0e-38	79.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]

BLAST of CSPI02G12930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34810.1	2.3e-26	56.19	SAUR-like auxin-responsive protein family	[more]
AT2G21210.1	2.6e-25	54.08	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	5.8e-25	54.64	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	1.7e-24	54.21	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	2.2e-24	58.88	SAUR-like auxin-responsive protein family	[more]

BLAST of CSPI02G12930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674175\|ref\|XP_011650154.1\|	4.1e-49	100.00	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	1.7e-42	86.60	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	1.1e-41	85.57	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	7.1e-41	84.54	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	1.6e-40	84.54	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G12930.1	CSPI02G12930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..92 score: 2.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 6.6
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 6.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G12930	Lsi10G004400	Bottle gourd (USVL1VR-Ls)	cpilsiB091
CSPI02G12930	MELO3C034603.2	Melon (DHL92) v3.6.1	cpimedB087
CSPI02G12930	CsaV3_2G015490	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G12930	Cla97C11G210300	Watermelon (97103) v2	cpiwmbB112
CSPI02G12930	CmaCh02G003470	Cucurbita maxima (Rimu)	cmacpiB593
CSPI02G12930	Cp4.1LG02g08030	Cucurbita pepo (Zucchini)	cpecpiB542
CSPI02G12930	Carg19375	Silver-seed gourd	carcpiB0347

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G12930	Wax gourd	cpiwgoB181
CSPI02G12930	Wild cucumber (PI 183967)	cpicpiB089
CSPI02G12930	Cucumber (Gy14) v1	cgycpiB265
CSPI02G12930	Cucurbita maxima (Rimu)	cmacpiB441
CSPI02G12930	Cucurbita maxima (Rimu)	cmacpiB547
CSPI02G12930	Cucurbita moschata (Rifu)	cmocpiB429
CSPI02G12930	Cucurbita moschata (Rifu)	cmocpiB500
CSPI02G12930	Cucurbita moschata (Rifu)	cmocpiB536
CSPI02G12930	Cucurbita moschata (Rifu)	cmocpiB582
CSPI02G12930	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G12930	Cucumber (Chinese Long) v2	cpicuB094
CSPI02G12930	Melon (DHL92) v3.5.1	cpimeB097
CSPI02G12930	Melon (DHL92) v3.5.1	cpimeB102
CSPI02G12930	Melon (DHL92) v3.5.1	cpimeB123
CSPI02G12930	Watermelon (Charleston Gray)	cpiwcgB111
CSPI02G12930	Watermelon (Charleston Gray)	cpiwcgB131
CSPI02G12930	Watermelon (97103) v1	cpiwmB150
CSPI02G12930	Watermelon (97103) v1	cpiwmB157
CSPI02G12930	Cucurbita pepo (Zucchini)	cpecpiB269
CSPI02G12930	Cucurbita pepo (Zucchini)	cpecpiB668
CSPI02G12930	Cucurbita pepo (Zucchini)	cpecpiB706
CSPI02G12930	Melon (DHL92) v3.6.1	cpimedB089
CSPI02G12930	Cucumber (Gy14) v2	cgybcpiB056
CSPI02G12930	Cucumber (Gy14) v2	cgybcpiB062
CSPI02G12930	Cucumber (Gy14) v2	cgybcpiB303