Lsi10G004400 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi10G004400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	SAUR-like auxin-responsive protein family
Location	chr10 : 6582113 .. 6582406 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGGTTGCTATCTTTGGTTCCTAATGCCAAGCAAATCCTGAAGATTCAGTCAGGATTTACCAAAAACCATTTGGATGTTCCAAAAGGGCATGTGGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCGTCATTCCAGCAACTACTCCGCCATGCTGAAGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAACTGACTTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGGTTGCTATCTTTGGTTCCTAATGCCAAGCAAATCCTGAAGATTCAGTCAGGATTTACCAAAAACCATTTGGATGTTCCAAAAGGGCATGTGGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCGTCATTCCAGCAACTACTCCGCCATGCTGAAGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAACTGACTTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGGTTGCTATCTTTGGTTCCTAATGCCAAGCAAATCCTGAAGATTCAGTCAGGATTTACCAAAAACCATTTGGATGTTCCAAAAGGGCATGTGGCAGTTTATGTGGGAGAGATTCAAAGGAAACGGTTCGTGGTTCCGATATCTTACTTAAACCATCCGTCATTCCAGCAACTACTCCGCCATGCTGAAGAAGAGTTTGGTTTCCATCATCCTCAAGGGGGCCTAACAATTCCTTGCAAAGAAGATGCCTTTACTGAACTGACTTCTAGATTGCAAGTATCTTGA

Protein sequence

MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS

Homology

[Close]

BLAST of Lsi10G004400 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-22
Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 1


Query: 17 KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTGAGSAAPKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFTELTSRLQ 96
          GLTIPC ED F  +TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004400 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 2.5e-22
Identity = 51/79 (64.56%), Postives = 57/79 (72.15%), Query Frame = 1


Query: 17 KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFTELTSRLQ 96
          GLTIPC ED F  +TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of Lsi10G004400 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-22
Identity = 52/90 (57.78%), Postives = 63/90 (70.00%), Query Frame = 1


Query: 6  LSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHA 65
          ++LV +     KI S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +
Sbjct: 1  MALVRSLLGAKKILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKS 60

Query: 66 EEEFGFHHPQGGLTIPCKEDAFTELTSRLQ 96
          E+EFGF HP GGLTIPC ED F  +TSRLQ
Sbjct: 61 EDEFGFDHPMGGLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004400 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 7.3e-22
Identity = 50/79 (63.29%), Postives = 58/79 (73.42%), Query Frame = 1


Query: 17 KIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQG 76
          KI S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFTELTSRLQ 96
          GLTIPC ED F  +TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of Lsi10G004400 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-21
Identity = 46/66 (69.70%), Postives = 54/66 (81.82%), Query Frame = 1


Query: 30 PKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTE 89
          PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED F  
Sbjct: 23 PKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFDHPMGGLTIPCPEDTFIN 82

Query: 90 LTSRLQ 96
          +TSRLQ
Sbjct: 83 VTSRLQ 88

[Close]

BLAST of Lsi10G004400 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+AKQILKIQSG TKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAFTE+TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Lsi10G004400 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG RLLSLVP+AKQILK+QSGFTKN L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL HAEEEFGFHHP GGLTIPCKEDAF +LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Lsi10G004400 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-42
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP  KQILKIQSGF K  LDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL H+EEEFGFHHPQG LTIPCKEDAF +LTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Lsi10G004400 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.0e-39
Identity = 80/97 (82.47%), Postives = 88/97 (90.72%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG+ LL LVP+AK+ILK+QS FTKN LDVPKGHVAVYVGEIQRKRFVVP+SYLN PSFQQ
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL  AEEEFGFHHP GGLTIPCKEDAF +LTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of Lsi10G004400 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-38
Identity = 81/97 (83.51%), Postives = 86/97 (88.66%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIR LSLVP+ KQILK+QSG TK  L VPKGHVAVYVGEIQ KRFVVPISYLN  SFQQ
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL +AEEEFGFHHPQGGLTIPCKEDAF +LTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of Lsi10G004400 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 119.0 bits (297), Expect = 1.6e-27
Identity = 57/98 (58.16%), Postives = 76/98 (77.55%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEI-QRKRFVVPISYLNHPSFQ 60
          M IR+  ++ ++KQ+LK  S  + N++ +PKGH+AVYVGE+ Q++RFVVP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 QLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          +LLR AEEEFGF HP GGLTIPC E  F +L SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of Lsi10G004400 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.1 bits (292), Expect = 6.1e-27
Identity = 57/97 (58.76%), Postives = 72/97 (74.23%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILK----IQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHP 60
          M IR+  ++ ++KQIL+    + S  + + LDVPKG++AVYVGE   KRFVVP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSR 94
          SFQ LLR AEEEFGF HP GGLTIPC E+ F +L SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of Lsi10G004400 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 113.6 bits (283), Expect = 6.8e-26
Identity = 59/105 (56.19%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 1   MGIRLLSLVPNAKQILKIQSGFTKNHLD------VPKGHVAVYVGE---IQRKRFVVPIS 60
           MG+   ++    KQILK+ S   +N         VPKGHVAVYVGE   +++KRFVVPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTEL-TSRLQ 96
           +LNHPSF++ L  AEEEFGF+HP GGLTIPC+E+ F +L  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of Lsi10G004400 vs. TAIR10
Match: AT4G34790.1 (AT4G34790.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25
Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 1


Query: 1   MGIRLLSLVPNAKQILKIQSGFTKNHLD-----------VPKGHVAVYVGE-IQRKRFVV 60
           MG+ + S++PNAKQI K QS   KN              VPKGHVAVYVGE +++KRFVV
Sbjct: 1   MGL-MRSMLPNAKQIFKSQSMRNKNGSSSPSTTTTTSGLVPKGHVAVYVGEQMEKKRFVV 60

Query: 61  PISYLNHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQV 97
           PISYLNHP F++ L  AEEE GFHH  GGLTIPC+E++F  L +  Q+
Sbjct: 61  PISYLNHPLFREFLNRAEEECGFHHSMGGLTIPCREESFLYLITSHQL 107

[Close]

BLAST of Lsi10G004400 vs. TAIR10
Match: AT4G34770.1 (AT4G34770.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-24
Identity = 60/104 (57.69%), Postives = 68/104 (65.38%), Query Frame = 1


Query: 1   MGIRLLSLVPNAKQILKIQSG------FTKNHLDVPKGHVAVYVGEI-QRKRFVVPISYL 60
           MGI+L+ L    +++ +  S        T    +VPKGHVAVYVGE   RKRFV+PISYL
Sbjct: 1   MGIQLIGLSQAKQKLQRSLSARIASLLATSGTNNVPKGHVAVYVGETYHRKRFVIPISYL 60

Query: 61  NHPSFQQLLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
           NHP FQ LL  AEEEFGF HP GGLTIPC ED FT L S L  S
Sbjct: 61  NHPLFQGLLNLAEEEFGFDHPMGGLTIPCTEDYFTALASILSGS 104

[Close]

BLAST of Lsi10G004400 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-44
Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+AKQILKIQSG TKN LDVPKGHVAVYVGEIQRKRFVVPISYLNHPSF+Q
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAFTE+TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of Lsi10G004400 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 3.4e-43
Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+AKQ+LK+QSGFTKN LDVPKGHVAVYVGEIQ KRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL +AEEEFGFHHPQGGLTIPCKED F +LTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of Lsi10G004400 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 2.2e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MG RLLSLVP+AKQILK+QSGFTKN L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL HAEEEFGFHHP GGLTIPCKEDAF +LTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of Lsi10G004400 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42
Identity = 85/97 (87.63%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP  KQILKIQSGF K  LDVPKGHVA+YVGEIQRKRFVVPISYLNHPSFQQ
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL H+EEEFGFHHPQG LTIPCKEDAF +LTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of Lsi10G004400 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 4.8e-42
Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPNAKQILKIQSGFTKNHLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQ 60
          MGIRLLSLVP+AKQILK+QSGFTKN L+VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQ
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLRHAEEEFGFHHPQGGLTIPCKEDAFTELTSRLQVS 98
          LL  AEEEFGFHHP GGLTIPCKEDAF +LTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

The following BLAST results are available for this feature:

BLAST of Lsi10G004400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	1.5e-22	64.56	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	2.5e-22	64.56	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	3.3e-22	57.78	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	7.3e-22	63.29	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU21_ARATH	2.1e-21	69.70	Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1	[more]

BLAST of Lsi10G004400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLF1_CUCSA	2.1e-44	91.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LPI0_CUCSA	1.5e-42	88.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	2.0e-42	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	2.0e-39	82.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	1.7e-38	83.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]

BLAST of Lsi10G004400 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	1.6e-27	58.16	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	6.1e-27	58.76	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	6.8e-26	56.19	SAUR-like auxin-responsive protein family	[more]
AT4G34790.1	2.6e-25	55.56	SAUR-like auxin-responsive protein family	[more]
AT4G34770.1	2.8e-24	57.69	SAUR-like auxin-responsive protein family	[more]

BLAST of Lsi10G004400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674175\|ref\|XP_011650154.1\|	3.0e-44	91.75	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115596\|ref\|XP_008457635.1\|	3.4e-43	89.69	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	2.2e-42	88.66	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	2.8e-42	87.63	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	4.8e-42	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi10G004400.1	Lsi10G004400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 14..93 score: 1.1
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 8.7
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi10G004400	Csa2G258700	Cucumber (Chinese Long) v2	culsiB093
Lsi10G004400	CSPI02G12930	Wild cucumber (PI 183967)	cpilsiB091
Lsi10G004400	CmaCh02G003470	Cucurbita maxima (Rimu)	cmalsiB548
Lsi10G004400	CmoCh02G003450	Cucurbita moschata (Rifu)	cmolsiB533
Lsi10G004400	CmoCh20G007830	Cucurbita moschata (Rifu)	cmolsiB489
Lsi10G004400	Cla016626	Watermelon (97103) v1	lsiwmB084
Lsi10G004400	MELO3C020768.2	Melon (DHL92) v3.6.1	lsimedB056

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi10G004400	Bottle gourd (USVL1VR-Ls)	lsilsiB021
Lsi10G004400	Cucumber (Gy14) v1	cgylsiB281
Lsi10G004400	Cucumber (Gy14) v1	cgylsiB617
Lsi10G004400	Cucurbita maxima (Rimu)	cmalsiB089
Lsi10G004400	Cucurbita maxima (Rimu)	cmalsiB466
Lsi10G004400	Cucurbita maxima (Rimu)	cmalsiB507
Lsi10G004400	Cucurbita moschata (Rifu)	cmolsiB073
Lsi10G004400	Cucurbita moschata (Rifu)	cmolsiB451
Lsi10G004400	Cucurbita moschata (Rifu)	cmolsiB491
Lsi10G004400	Cucurbita pepo (Zucchini)	cpelsiB220
Lsi10G004400	Cucurbita pepo (Zucchini)	cpelsiB436
Lsi10G004400	Cucurbita pepo (Zucchini)	cpelsiB589
Lsi10G004400	Wild cucumber (PI 183967)	cpilsiB497
Lsi10G004400	Cucumber (Chinese Long) v2	culsiB489
Lsi10G004400	Melon (DHL92) v3.5.1	lsimeB054
Lsi10G004400	Melon (DHL92) v3.5.1	lsimeB064
Lsi10G004400	Watermelon (Charleston Gray)	lsiwcgB039
Lsi10G004400	Watermelon (Charleston Gray)	lsiwcgB057
Lsi10G004400	Watermelon (97103) v1	lsiwmB079
Lsi10G004400	Cucumber (Gy14) v2	cgyblsiB086
Lsi10G004400	Cucumber (Gy14) v2	cgyblsiB456
Lsi10G004400	Cucumber (Chinese Long) v3	cuclsiB104
Lsi10G004400	Watermelon (97103) v2	lsiwmbB043
Lsi10G004400	Wax gourd	lsiwgoB080