CmoCh02G003460 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003460
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr02 : 1748006 .. 1748299 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA

Homology

[Close]

BLAST of CmoCh02G003460 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.2e-25
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003460 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-24
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   +    +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRL 95
           HP GGLTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh02G003460 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-44
Identity = 88/97 (90.72%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQSGFTK+QL+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003460 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmoCh02G003460 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.3e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QSG TK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003460 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-41
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MG+ LL LVPHAK+ILKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VP+SYLN PSFQ+
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS AEEEFGFHHP GGLTIPCKEDAF+DLTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CmoCh02G003460 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.9e-41
Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIR LSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRF+VPISYLN  SFQ+
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CmoCh02G003460 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27
Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEI-QRKRFLVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE+ Q++RF+VP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 KLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          KLL  AEEEFGF HP GGLTIPC E  FIDL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh02G003460 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRF+VP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh02G003460 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-26
Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVGE---IQRKRFLVPIS 60
           MG+   ++    KQILK+ S   +++        VPKGHVAVYVGE   +++KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh02G003460 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003460 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-45
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQ+LKMQSGFTK+QLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CmoCh02G003460 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-44
Identity = 88/97 (90.72%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQSGFTK+QL+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003460 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmoCh02G003460 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 3.4e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QSG TK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003460 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 4.4e-43
Identity = 86/97 (88.66%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQSGFTK++L+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+ AEEEFGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

The following BLAST results are available for this feature:

BLAST of CmoCh02G003460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	9.2e-25	65.48	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	3.5e-24	67.09	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	5.9e-24	65.82	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	1.3e-23	65.82	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU23_ARATH	1.7e-23	63.86	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of CmoCh02G003460 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	1.6e-44	90.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	1.4e-43	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	2.3e-43	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	2.2e-41	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	4.9e-41	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]

BLAST of CmoCh02G003460 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	2.7e-27	58.16	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	3.6e-27	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.8e-26	56.19	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.2e-26	65.48	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	2.0e-25	67.09	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh02G003460 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115596\|ref\|XP_008457635.1\|	3.6e-45	91.75	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	2.3e-44	90.72	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	2.0e-43	87.63	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	3.4e-43	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	4.4e-43	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh02G003460.1	CmoCh02G003460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 8.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.7
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh02G003460	Csa2G258700	Cucumber (Chinese Long) v2	cmocuB577
CmoCh02G003460	MELO3C020768	Melon (DHL92) v3.5.1	cmomeB527

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh02G003460	CmoCh20G007900	Cucurbita moschata (Rifu)	cmocmoB416

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh02G003460	Cucurbita pepo (Zucchini)	cmocpeB575
CmoCh02G003460	Cucurbita pepo (Zucchini)	cmocpeB595
CmoCh02G003460	Bottle gourd (USVL1VR-Ls)	cmolsiB533
CmoCh02G003460	Cucumber (Gy14) v2	cgybcmoB220
CmoCh02G003460	Cucumber (Gy14) v2	cgybcmoB944
CmoCh02G003460	Melon (DHL92) v3.6.1	cmomedB606
CmoCh02G003460	Silver-seed gourd	carcmoB0436
CmoCh02G003460	Cucumber (Chinese Long) v3	cmocucB0687
CmoCh02G003460	Watermelon (97103) v2	cmowmbB587
CmoCh02G003460	Wax gourd	cmowgoB0736
CmoCh02G003460	Cucurbita moschata (Rifu)	cmocmoB388
CmoCh02G003460	Cucurbita moschata (Rifu)	cmocmoB404
CmoCh02G003460	Cucumber (Gy14) v1	cgycmoB0483
CmoCh02G003460	Cucumber (Gy14) v1	cgycmoB1053
CmoCh02G003460	Cucurbita maxima (Rimu)	cmacmoB554
CmoCh02G003460	Cucurbita maxima (Rimu)	cmacmoB619
CmoCh02G003460	Wild cucumber (PI 183967)	cmocpiB582
CmoCh02G003460	Wild cucumber (PI 183967)	cmocpiB644
CmoCh02G003460	Cucumber (Chinese Long) v2	cmocuB633
CmoCh02G003460	Melon (DHL92) v3.5.1	cmomeB552
CmoCh02G003460	Watermelon (Charleston Gray)	cmowcgB515
CmoCh02G003460	Watermelon (Charleston Gray)	cmowcgB530
CmoCh02G003460	Watermelon (97103) v1	cmowmB580
CmoCh02G003460	Watermelon (97103) v1	cmowmB603