CmoCh02G003460.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh02G003460.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	SAUR-like auxin-responsive protein family
Location	Cmo_Chr02 : 1748006 .. 1748299 (-)
Sequence length	294

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA

mRNA sequence

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA

Coding sequence (CDS)

ATGGGGATTCGATTGCTATCCTTGGTTCCTCATGCCAAGCAGATCCTAAAGATGCAGTCAGGTTTTACCAAAAGTCAGTTGGATGTGCCAAAAGGCCATGTGGCTGTTTATGTAGGAGAGATTCAAAGAAAGCGGTTTTTGGTTCCAATTTCTTACTTAAACCATCCATCATTCCAAAAACTACTCAGCCATGCAGAGGAAGAGTTTGGCTTCCATCATCCACAAGGGGGTCTAACAATTCCTTGCAAGGAGGATGCCTTCATTGATCTCACCTCTAGATTGCAAGTATCTTGA

Homology

[Close]

BLAST of CmoCh02G003460.1 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 9.2e-25
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460.1 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003460.1 vs. Swiss-Prot
Match: SAU22_ARATH (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-24
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +E+EFGF HP G
Sbjct: 12 KILSRSTAAVSAAPKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEDEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCHEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460.1 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.3e-23
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVP+SYL+ PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTAAGSAAPKGFLAVYVGESQKKRYLVPLSYLSQPSFQALLSKSEEEFGFAHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSRLQ
Sbjct: 72 GLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460.1 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 53/83 (63.86%), Postives = 63/83 (75.90%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   +    +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSAAAVSAP---PKGFLAVYVGESQKKRYLVPLSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRL 95
           HP GGLTIPC ED FI++TSRL
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRL 89

[Close]

BLAST of CmoCh02G003460.1 vs. TrEMBL
Match: A0A0A0LPI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-44
Identity = 88/97 (90.72%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQSGFTK+QL+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003460.1 vs. TrEMBL
Match: A0A0A0LIZ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmoCh02G003460.1 vs. TrEMBL
Match: A0A0A0LLF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 2.3e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QSG TK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003460.1 vs. TrEMBL
Match: A0A0A0LJ99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.2e-41
Identity = 82/97 (84.54%), Postives = 91/97 (93.81%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MG+ LL LVPHAK+ILKMQS FTK+QLDVPKGHVAVYVGEIQRKRF+VP+SYLN PSFQ+
Sbjct: 1  MGVPLLCLVPHAKKILKMQSSFTKNQLDVPKGHVAVYVGEIQRKRFVVPVSYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS AEEEFGFHHP GGLTIPCKEDAF+DLTSRL+V+
Sbjct: 61 LLSRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLKVA 97

[Close]

BLAST of CmoCh02G003460.1 vs. TrEMBL
Match: A0A0A0LJA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 4.9e-41
Identity = 84/97 (86.60%), Postives = 89/97 (91.75%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIR LSLVPH KQILKMQSG TK QL VPKGHVAVYVGEIQ KRF+VPISYLN  SFQ+
Sbjct: 1  MGIRFLSLVPHVKQILKMQSGLTKKQLGVPKGHVAVYVGEIQMKRFVVPISYLNDLSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPCKEDAF+DLTS+LQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDAFVDLTSKLQVS 97

[Close]

BLAST of CmoCh02G003460.1 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 118.2 bits (295), Expect = 2.7e-27
Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEI-QRKRFLVPISYLNHPSFQ 60
          M IR+  ++  +KQ+LK  S  + + + +PKGH+AVYVGE+ Q++RF+VP++YL+HP FQ
Sbjct: 1  MAIRISRVLQSSKQLLKSLS-HSSNNVAIPKGHLAVYVGEMMQKRRFVVPVTYLSHPCFQ 60

Query: 61 KLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          KLL  AEEEFGF HP GGLTIPC E  FIDL SRL  S
Sbjct: 61 KLLRKAEEEFGFDHPMGGLTIPCTEQIFIDLASRLSTS 97

[Close]

BLAST of CmoCh02G003460.1 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 117.9 bits (294), Expect = 3.6e-27
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILK----MQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHP 60
          M IR+  ++  +KQIL+    + S  + S LDVPKG++AVYVGE   KRF+VP+SYL+ P
Sbjct: 1  MAIRIPRVLQSSKQILRQAKLLSSSSSSSSLDVPKGYLAVYVGEQNMKRFVVPVSYLDQP 60

Query: 61 SFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSR 94
          SFQ LL  AEEEFGF HP GGLTIPC E+ FIDL SR
Sbjct: 61 SFQDLLRKAEEEFGFDHPMGGLTIPCSEEIFIDLASR 97

[Close]

BLAST of CmoCh02G003460.1 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 1.8e-26
Identity = 59/105 (56.19%), Postives = 77/105 (73.33%), Query Frame = 1


Query: 1   MGIRLLSLVPHAKQILKMQSGFTKSQLD------VPKGHVAVYVGE---IQRKRFLVPIS 60
           MG+   ++    KQILK+ S   +++        VPKGHVAVYVGE   +++KRF+VPIS
Sbjct: 1   MGLSRFAISNATKQILKLNSLANRNRTSSSSSDHVPKGHVAVYVGEQIEMEKKRFVVPIS 60

Query: 61  YLNHPSFQKLLSHAEEEFGFHHPQGGLTIPCKEDAFIDL-TSRLQ 96
           +LNHPSF++ LS AEEEFGF+HP GGLTIPC+E+ F+DL  SRLQ
Sbjct: 61  FLNHPSFKEFLSRAEEEFGFNHPMGGLTIPCREEVFLDLIASRLQ 105

[Close]

BLAST of CmoCh02G003460.1 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26
Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 1


Query: 12 AKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGF 71
          AK+IL   +G   +    PKG +AVYVGE Q+KR+LVP+SYLN PSFQ LLS +EEEFGF
Sbjct: 10 AKKILSRSTGAGSA---APKGFLAVYVGESQKKRYLVPVSYLNQPSFQALLSKSEEEFGF 69

Query: 72 HHPQGGLTIPCKEDAFIDLTSRLQ 96
           HP GGLTIPC ED FI++TSRLQ
Sbjct: 70 DHPMGGLTIPCPEDTFINVTSRLQ 90

[Close]

BLAST of CmoCh02G003460.1 vs. TAIR10
Match: AT5G18020.1 (AT5G18020.1 SAUR-like auxin-responsive protein family )

HSP 1 Score: 112.1 bits (279), Expect = 2.0e-25
Identity = 53/79 (67.09%), Postives = 61/79 (77.22%), Query Frame = 1


Query: 17 KMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQKLLSHAEEEFGFHHPQG 76
          K+ S  T +    PKG +AVYVGE Q+KR+LVPISYLN PSFQ LLS +EEEFGF HP G
Sbjct: 12 KILSRSTTAASAAPKGFLAVYVGESQKKRYLVPISYLNQPSFQALLSKSEEEFGFDHPMG 71

Query: 77 GLTIPCKEDAFIDLTSRLQ 96
          GLTIPC ED FI++TSR Q
Sbjct: 72 GLTIPCPEDTFINVTSRFQ 90

[Close]

BLAST of CmoCh02G003460.1 vs. NCBI nr
Match: gi|659115596|ref|XP_008457635.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 3.6e-45
Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQ+LKMQSGFTK+QLDVPKGHVAVYVGEIQ KRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPHAKQLLKMQSGFTKNQLDVPKGHVAVYVGEIQSKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLS+AEEEFGFHHPQGGLTIPCKED F+DLTSRLQVS
Sbjct: 61 LLSYAEEEFGFHHPQGGLTIPCKEDTFLDLTSRLQVS 97

[Close]

BLAST of CmoCh02G003460.1 vs. NCBI nr
Match: gi|700206757|gb|KGN61876.1| (hypothetical protein Csa_2G258720 [Cucumis sativus])

HSP 1 Score: 186.4 bits (472), Expect = 2.3e-44
Identity = 88/97 (90.72%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MG RLLSLVPHAKQILKMQSGFTK+QL+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ+
Sbjct: 1  MGFRLLSLVPHAKQILKMQSGFTKNQLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LLSHAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLSHAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

[Close]

BLAST of CmoCh02G003460.1 vs. NCBI nr
Match: gi|700206761|gb|KGN61880.1| (hypothetical protein Csa_2G258760 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVP+ KQILK+QSGF K QLDVPKGHVA+YVGEIQRKRF+VPISYLNHPSFQ+
Sbjct: 1  MGIRLLSLVPYGKQILKIQSGFIKGQLDVPKGHVAIYVGEIQRKRFVVPISYLNHPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+H+EEEFGFHHPQG LTIPCKEDAFIDLTSRLQ+S
Sbjct: 61 LLNHSEEEFGFHHPQGALTIPCKEDAFIDLTSRLQIS 97

[Close]

BLAST of CmoCh02G003460.1 vs. NCBI nr
Match: gi|778674175|ref|XP_011650154.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 3.4e-43
Identity = 85/97 (87.63%), Postives = 93/97 (95.88%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILK+QSG TK+QLDVPKGHVAVYVGEIQRKRF+VPISYLNHPSF++
Sbjct: 1  MGIRLLSLVPHAKQILKIQSGLTKNQLDVPKGHVAVYVGEIQRKRFVVPISYLNHPSFKQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL HAEEEFGFHHPQGGLTIPCKEDAF ++TS+LQ S
Sbjct: 61 LLCHAEEEFGFHHPQGGLTIPCKEDAFTEITSKLQAS 97

[Close]

BLAST of CmoCh02G003460.1 vs. NCBI nr
Match: gi|659115592|ref|XP_008457632.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 4.4e-43
Identity = 86/97 (88.66%), Postives = 94/97 (96.91%), Query Frame = 1


Query: 1  MGIRLLSLVPHAKQILKMQSGFTKSQLDVPKGHVAVYVGEIQRKRFLVPISYLNHPSFQK 60
          MGIRLLSLVPHAKQILKMQSGFTK++L+VPKGHVAVYVGEIQRKRF+VPISYLN PSFQ+
Sbjct: 1  MGIRLLSLVPHAKQILKMQSGFTKNRLNVPKGHVAVYVGEIQRKRFVVPISYLNDPSFQQ 60

Query: 61 LLSHAEEEFGFHHPQGGLTIPCKEDAFIDLTSRLQVS 98
          LL+ AEEEFGFHHP GGLTIPCKEDAF+DLTSRLQV+
Sbjct: 61 LLNRAEEEFGFHHPHGGLTIPCKEDAFVDLTSRLQVA 97

The following BLAST results are available for this feature:

BLAST of CmoCh02G003460.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SAU24_ARATH	9.2e-25	65.48	Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1	[more]
SAU20_ARATH	3.5e-24	67.09	Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1	[more]
SAU22_ARATH	5.9e-24	65.82	Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana GN=SAUR22 PE=2 SV=1	[more]
SAU19_ARATH	1.3e-23	65.82	Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1	[more]
SAU23_ARATH	1.7e-23	63.86	Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1	[more]

BLAST of CmoCh02G003460.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPI0_CUCSA	1.6e-44	90.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258720 PE=4 SV=1	[more]
A0A0A0LIZ9_CUCSA	1.4e-43	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258760 PE=4 SV=1	[more]
A0A0A0LLF1_CUCSA	2.3e-43	87.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258700 PE=4 SV=1	[more]
A0A0A0LJ99_CUCSA	2.2e-41	84.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258740 PE=4 SV=1	[more]
A0A0A0LJA3_CUCSA	4.9e-41	86.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258790 PE=4 SV=1	[more]

BLAST of CmoCh02G003460.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G21210.1	2.7e-27	58.16	SAUR-like auxin-responsive protein family	[more]
AT4G38840.1	3.6e-27	59.79	SAUR-like auxin-responsive protein family	[more]
AT4G34810.1	1.8e-26	56.19	SAUR-like auxin-responsive protein family	[more]
AT5G18080.1	5.2e-26	65.48	SAUR-like auxin-responsive protein family	[more]
AT5G18020.1	2.0e-25	67.09	SAUR-like auxin-responsive protein family	[more]

BLAST of CmoCh02G003460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115596\|ref\|XP_008457635.1\|	3.6e-45	91.75	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]
gi\|700206757\|gb\|KGN61876.1\|	2.3e-44	90.72	hypothetical protein Csa_2G258720 [Cucumis sativus]	[more]
gi\|700206761\|gb\|KGN61880.1\|	2.0e-43	87.63	hypothetical protein Csa_2G258760 [Cucumis sativus]	[more]
gi\|778674175\|ref\|XP_011650154.1\|	3.4e-43	87.63	PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]	[more]
gi\|659115592\|ref\|XP_008457632.1\|	4.4e-43	88.66	PREDICTED: auxin-induced protein 15A-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh02G003460	CmoCh02G003460	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003460.1	CmoCh02G003460.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003460.1.CDS.1	CmoCh02G003460.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh02G003460.1.exon.1	CmoCh02G003460.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 13..93 score: 8.5
None	No IPR available	PANTHER	PTHR31929	FAMILY NOT NAMED	coord: 2..97 score: 1.7
None	No IPR available	PANTHER	PTHR31929:SF13	SUBFAMILY NOT NAMED	coord: 2..97 score: 1.7