Csa2G101090 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAGAAAAAGAAAAAATCTCTCTTCGTGTAAACCAGAGTGGGAAGGTTGTTCCCGATTTCCTTCCCAACGCCTAGCAGATTTCTGATTTGGGGATTTATGGTTCTCTCTTCCAATCTCTAAAATCTCTACCTCTTTCCCTTTTCAATGGAATTCACCATCTCCGATGATTTGTTGGGTACTTTCGTCCCTATTTTCGTTTATTGGTTCTATTCTGGCTTATACCTTCTTCTTGGTTTCTTTGACAATTATCGATTGCACTCCAAGACAGATGAGGATGAGAAGAACTTGGTTTCTAAATCAACTGTTGTTCGGGGCGTTCTTTTTCAGCAATTCATTCAGGCTATTGTCGCCATCATCCTCTTTAAGGTGACCTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTACCTATTTTTTCAATTCTTAATCGTTGCTCTTTGTTAATTTTGTTGTTATTAAGCTCATTTCTGATTCTAATTGTTTGTGAAACTTACCCTAAAATATTTCAACTGAGATTGTATTTTGCTCTAGACTTTGCCGAAACTCTTTGTTTGATCTTCCTGAATTTTTCTTGGTTTATCACCTCTTTGTGGTACAGCTTGATTATAGTTTTACTAGACTGCATACAAATTCGTTGTGGGTTTTCTTGTTTCTGGACCTATTCAGTTTGACAAAAATCTAAATAATTACTTCTCTTCTGTTTACATGTGTTTTAAATTTTGATTTTGACAAGAACAGACTAGACACTGGATGGGGGGAGTGAAGAAGCAATGTCATTGTTGACCTATTATCAACTTTCGGTTTCTTATAATTACAACTATTGTATATCTTAAACAGGATTTGTTGCTTACTTTTGTTACTTTAGTTCGAATTGATGGAGCAAAATTTTAAACCTTTTCACATCAAAATAATTTAGATGGCAATTGAATTTTTTTTAATTTGGTTCAAGAATAAGAGGAGTTAATGATTCTAAGTTAAGGAAGTTGAAGGACAAAATCTGGTTATTAGCTTTTGACTGTAAGTATGTTTTGTTTCGAACACTACAAGGAAGGCTTTTGGTGAATACTTTTAACTTCAAGATAGACGTGAACAAAATTTTTGCATATTACCCCTTTTTCATAGCTAAATATTCTCTATGAGATGATTTTTTGGACTGGAAAGTTATGGTCTAAAACATGATATTTTTGTTTTCTTTGTAAATTAAATTCCATTTCCTTTAAGTATATTGACCTTTTGATTTGTCTATTCGTTTTAGGTTACATGTTTATTCACAAGTTTTAGGACCAATCCCCATTTGTGTTCTGCATCGGCACTCGGTTGGAAGTCACCAACTTGCAAACAAAAAAATCTTGAACTTCTGTTTAATTTTGTGGTGTTTTGCTTGTATTTCCTATAATGTTGTTGCCATTGCTTCTAATCCGTGAAGTTCCTTTTCTTTTTGAGTCCCATGCTAAACTAGTTTAGCAGTTGTTCGTGTGAAATATTGTAGACTGAACTAAAACTATTGTTATTATTAACCTCATCCAAGTGCTGTTAGATGAATTGTTCAGTTTGTCGTCCCTGTGGTTAAAGTGGCAAGTCCTGAACTCAAATGTTTTGAGCATACGAGCTCAAACTAAGATGCCACCTATTTGGGGCATCTTAGAAATCCTGGTTTTGTAATATTCTAAAGTTTAGTAGTTGTCTCGTGAGATTATTCCAAATGTATGTAAACTAACTCAGAGACTTAAGTTTTTGAAATAGAGAAAAGAAAAGGAATCAATGAGAACTTTGGCATAAGTCATTGATATTATGTGGGGTGTCTCTGCACTTACGTTCGAGTTTGGTCTCTGAATTTATAATTGCATTTTGTTATGTTCAGTTGACTGGAAATGATGATGGAAGCAATGCAGTTCCAAAGTCATGGCCAATGGTTGTTTTGCAATTTTTAACTGCGATGTTCATTCTAGACACGTGGCAGTACTTTGCACACCGATACATGCATCATAACAAGTTTCTGTACAGACACATTCATTCTCAGCACCATAGGCTTGTTGTTCCATATGCATTTGGGGCTTTGTATAATCATCCAGTGGAAGGTCTACTGCTTGACACGATTGGTGGGGCGTTGTCATTTTTAGCATCTGGTATGACTCCTAGAATCTCCATCTTCTTCTTTTCCTTTGCCACTATTAAGACGGTAGACGATCACTGTGGATTATGGCTGCCTGGTAATCTCTTCCACATCTTATTTCGCAACAATACTGCATATCACGACGTCCACCATCAACTATACGGCAGCAAGTTTAATTTTTCACAGCCTTTCTTTGTTACATGGGATAGAATACTTGGTACCTATATGCCTTACTCCTTGGAGAAGAGAGCAAGCGGCGGCTTTGAAGCACGACCAAAGATTGAATAAATACCGTAAGCAGCAATCAGTTGCTTATATTATATTATTTGTATCCCACAACTATATGATTTGTATATTACTCCTATTGTTGCCATTTTTATACTTTTTCCCCCATTTTCCCTCTCTTCCCTAACATAGATTTGAAACATGAGTTCAGATGAGCTAGGTTGTGTTTTGATATATATATATTTTTTAAAAAAAATTTATAATTTTTTAG ATGGAATTCACCATCTCCGATGATTTGTTGGGTACTTTCGTCCCTATTTTCGTTTATTGGTTCTATTCTGGCTTATACCTTCTTCTTGGTTTCTTTGACAATTATCGATTGCACTCCAAGACAGATGAGGATGAGAAGAACTTGGTTTCTAAATCAACTGTTGTTCGGGGCGTTCTTTTTCAGCAATTCATTCAGGCTATTGTCGCCATCATCCTCTTTAAGTTGACTGGAAATGATGATGGAAGCAATGCAGTTCCAAAGTCATGGCCAATGGTTGTTTTGCAATTTTTAACTGCGATGTTCATTCTAGACACGTGGCAGTACTTTGCACACCGATACATGCATCATAACAAGTTTCTGTACAGACACATTCATTCTCAGCACCATAGGCTTGTTGTTCCATATGCATTTGGGGCTTTGTATAATCATCCAGTGGAAGGTCTACTGCTTGACACGATTGGTGGGGCGTTGTCATTTTTAGCATCTGGTATGACTCCTAGAATCTCCATCTTCTTCTTTTCCTTTGCCACTATTAAGACGGTAGACGATCACTGTGGATTATGGCTGCCTGGTAATCTCTTCCACATCTTATTTCGCAACAATACTGCATATCACGACGTCCACCATCAACTATACGGCAGCAAGTTTAATTTTTCACAGCCTTTCTTTGTTACATGGGATAGAATACTTGGTACCTATATGCCTTACTCCTTGGAGAAGAGAGCAAGCGGCGGCTTTGAAGCACGACCAAAGATTGAATAA ATGGAATTCACCATCTCCGATGATTTGTTGGGTACTTTCGTCCCTATTTTCGTTTATTGGTTCTATTCTGGCTTATACCTTCTTCTTGGTTTCTTTGACAATTATCGATTGCACTCCAAGACAGATGAGGATGAGAAGAACTTGGTTTCTAAATCAACTGTTGTTCGGGGCGTTCTTTTTCAGCAATTCATTCAGGCTATTGTCGCCATCATCCTCTTTAAGTTGACTGGAAATGATGATGGAAGCAATGCAGTTCCAAAGTCATGGCCAATGGTTGTTTTGCAATTTTTAACTGCGATGTTCATTCTAGACACGTGGCAGTACTTTGCACACCGATACATGCATCATAACAAGTTTCTGTACAGACACATTCATTCTCAGCACCATAGGCTTGTTGTTCCATATGCATTTGGGGCTTTGTATAATCATCCAGTGGAAGGTCTACTGCTTGACACGATTGGTGGGGCGTTGTCATTTTTAGCATCTGGTATGACTCCTAGAATCTCCATCTTCTTCTTTTCCTTTGCCACTATTAAGACGGTAGACGATCACTGTGGATTATGGCTGCCTGGTAATCTCTTCCACATCTTATTTCGCAACAATACTGCATATCACGACGTCCACCATCAACTATACGGCAGCAAGTTTAATTTTTCACAGCCTTTCTTTGTTACATGGGATAGAATACTTGGTACCTATATGCCTTACTCCTTGGAGAAGAGAGCAAGCGGCGGCTTTGAAGCACGACCAAAGATTGAATAA MEFTISDDLLGTFVPIFVYWFYSGLYLLLGFFDNYRLHSKTDEDEKNLVSKSTVVRGVLFQQFIQAIVAIILFKLTGNDDGSNAVPKSWPMVVLQFLTAMFILDTWQYFAHRYMHHNKFLYRHIHSQHHRLVVPYAFGALYNHPVEGLLLDTIGGALSFLASGMTPRISIFFFSFATIKTVDDHCGLWLPGNLFHILFRNNTAYHDVHHQLYGSKFNFSQPFFVTWDRILGTYMPYSLEKRASGGFEARPKIE*
BLAST of Csa2G101090 vs. Swiss-Prot
Match: SBH1_ARATH (Sphinganine C4-monooxygenase 1 OS=Arabidopsis thaliana GN=SBH1 PE=1 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.4e-97 Identity = 164/214 (76.64%), Postives = 189/214 (88.32%), Query Frame = 1
BLAST of Csa2G101090 vs. Swiss-Prot
Match: SBH2_ARATH (Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 5.1e-95 Identity = 160/211 (75.83%), Postives = 184/211 (87.20%), Query Frame = 1
BLAST of Csa2G101090 vs. Swiss-Prot
Match: SUR2_SCHPO (Sphingolipid C4-hydroxylase sur2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sur2 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 2.5e-49 Identity = 83/141 (58.87%), Postives = 105/141 (74.47%), Query Frame = 1
BLAST of Csa2G101090 vs. Swiss-Prot
Match: SUR2_YEAST (Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUR2 PE=1 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 4.5e-43 Identity = 90/209 (43.06%), Postives = 118/209 (56.46%), Query Frame = 1
BLAST of Csa2G101090 vs. Swiss-Prot
Match: ERG3_YEAST (Delta(7)-sterol 5(6)-desaturase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG3 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.7e-10 Identity = 45/142 (31.69%), Postives = 69/142 (48.59%), Query Frame = 1
BLAST of Csa2G101090 vs. TrEMBL
Match: A0A0A0LJX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G101090 PE=3 SV=1) HSP 1 Score: 463.0 bits (1190), Expect = 2.1e-127 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1
BLAST of Csa2G101090 vs. TrEMBL
Match: M5XMN9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010258mg PE=3 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 1.9e-101 Identity = 176/210 (83.81%), Postives = 189/210 (90.00%), Query Frame = 1
BLAST of Csa2G101090 vs. TrEMBL
Match: W9R575_9ROSA (Sphingoid base hydroxylase 2 OS=Morus notabilis GN=L484_003193 PE=3 SV=1) HSP 1 Score: 372.1 bits (954), Expect = 4.8e-100 Identity = 174/211 (82.46%), Postives = 189/211 (89.57%), Query Frame = 1
BLAST of Csa2G101090 vs. TrEMBL
Match: A0A0A0KQL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G605020 PE=3 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 8.2e-100 Identity = 172/210 (81.90%), Postives = 187/210 (89.05%), Query Frame = 1
BLAST of Csa2G101090 vs. TrEMBL
Match: B9S8V4_RICCO (Sur2 hydroxylase/desaturase, putative OS=Ricinus communis GN=RCOM_0836090 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 1.2e-98 Identity = 174/214 (81.31%), Postives = 191/214 (89.25%), Query Frame = 1
BLAST of Csa2G101090 vs. TAIR10
Match: AT1G69640.1 (AT1G69640.1 sphingoid base hydroxylase 1) HSP 1 Score: 356.3 bits (913), Expect = 1.4e-98 Identity = 164/214 (76.64%), Postives = 189/214 (88.32%), Query Frame = 1
BLAST of Csa2G101090 vs. TAIR10
Match: AT1G14290.1 (AT1G14290.1 sphingoid base hydroxylase 2) HSP 1 Score: 348.6 bits (893), Expect = 2.9e-96 Identity = 160/211 (75.83%), Postives = 184/211 (87.20%), Query Frame = 1
BLAST of Csa2G101090 vs. TAIR10
Match: AT3G02590.1 (AT3G02590.1 Fatty acid hydroxylase superfamily protein) HSP 1 Score: 52.0 bits (123), Expect = 5.5e-07 Identity = 39/157 (24.84%), Postives = 69/157 (43.95%), Query Frame = 1
BLAST of Csa2G101090 vs. NCBI nr
Match: gi|700206260|gb|KGN61379.1| (hypothetical protein Csa_2G101090 [Cucumis sativus]) HSP 1 Score: 463.0 bits (1190), Expect = 3.0e-127 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 1
BLAST of Csa2G101090 vs. NCBI nr
Match: gi|449442297|ref|XP_004138918.1| (PREDICTED: sphinganine C(4)-monooxygenase 1-like [Cucumis sativus]) HSP 1 Score: 446.8 bits (1148), Expect = 2.2e-122 Identity = 222/253 (87.75%), Postives = 222/253 (87.75%), Query Frame = 1
BLAST of Csa2G101090 vs. NCBI nr
Match: gi|659082180|ref|XP_008441706.1| (PREDICTED: sphinganine C(4)-monooxygenase 1-like [Cucumis melo]) HSP 1 Score: 442.6 bits (1137), Expect = 4.1e-121 Identity = 216/253 (85.38%), Postives = 221/253 (87.35%), Query Frame = 1
BLAST of Csa2G101090 vs. NCBI nr
Match: gi|596288798|ref|XP_007225995.1| (hypothetical protein PRUPE_ppa010258mg [Prunus persica]) HSP 1 Score: 376.7 bits (966), Expect = 2.8e-101 Identity = 176/210 (83.81%), Postives = 189/210 (90.00%), Query Frame = 1
BLAST of Csa2G101090 vs. NCBI nr
Match: gi|645229801|ref|XP_008221629.1| (PREDICTED: sphinganine C(4)-monooxygenase 1-like [Prunus mume]) HSP 1 Score: 375.2 bits (962), Expect = 8.1e-101 Identity = 175/210 (83.33%), Postives = 189/210 (90.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|