Csa1G714680 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G714680
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPhotosystem I reaction center subunit III; contains IPR003666 (Photosystem I PsaF, reaction centre subunit III)
LocationChr1 : 29037770 .. 29039419 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACAACTATCCAACTCAGCTTTTCCCTTACTCTCTTCATCTTATCCAAAACCACCTTCTCCACCACTAATCTCATGATCCTCTCTGAATCTAAAACCGTTCCCTCCACACTCTTTCTCCAAATCTCCATCTTCTTCTTCCTGCAATTCCCAATTCCTTCGAACCCATTTCAACAATGTCTCTCACAATCCCCACTAACCTCTCAAAACCCCTCTTGAAGCCCAAATTTAGCTCCCCACTCGCCTTGAAGCCAAAACCCTCCTCATCTATTCTCTGCTCCGCCTCCCAAAATCAAAACCAAAACACCTCTTCCTCTCTTCAAGCCTTCTCCGCTGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCTCCTCTCCCCGCCGTCGCCGACATCTCCGGTCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTGAGTCTTCTTTGAAGAACTACGCCCCGGATAGCGCCCCGGCGCTTGCCATCAAAGCCACGATCGAAAAGACAAAGAGGCGATTTGCCTTCTATGGGAAACAAGGGCTTCTTTGTGGTGCTGATGGCTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATTACTCCTGGATTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGAAAAGAAACCTACCCAAAAGGAGATTATCATTGATGTTCCTTTGGCCACTAGTTTGGTGTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAAGATGTCTAATTCTTCTACTTCAGGTACTGCTCTTCTTTTTGTTGCAGTTAAGTTGAGTGATTCAATGGAGTATTTGAATTGGTTGTTATGTCTCTGAATTGCTTTATGCTAATTTTCAAGCTCATAAGTGAATATACCATAAAAATGGATTTAGCTATGTTTCTTTAGGAGTGGTGTTTCCATGGCCAATCTGCTCCTTTGATTATTGGGTATTCCAAGTGTGGTTCATAAAGTGTTAGAGCACATAATTCTATGTCTTATTCATCATAACATCACTTACTTCTTAATTGATACTGATATTGATATTTGTTTGTTGGTATCGGTGATTTTCTAGTTAGAAGTGCAGTGAAGGTCTTACAATGTAATCGATGTACTTCAACTTCTTATAATGTAATGGATGTGATTATGTTTTTAGCTTTAATGGTGATTTAACACGAAGAACAAAAAGATGGTCTTTATTTATTATTGGTTGTCTTTTTTTTTTCTTTTTTATGAATTCTCTCTTTATGTATGTTTTACCAACGGCCAATCTTCTCATTTGTTTCATATTGTTTTGTTGTGGTATTGACAGAGATAGGGAAAGTGGAAGTGGAATTGAGTTTTGGAGGATATGGAGGGGAATGGCATGGAGTTTGTGAAATATTTGTGTATTTAATTTGGAAACTTGAGATGAGTATATGTAATGGTTGGTTTGTGTTGGATACAAGGGCAATCTATTCTTTTCACTTCCCCTTTCTTTTGTACTCAAAATTCTCTTAACATGATTGACCCATCAATCTTTTCTTAAGTAATTAATTAGAAATTTTCAT

mRNA sequence

ATGTCTCTCACAATCCCCACTAACCTCTCAAAACCCCTCTTGAAGCCCAAATTTAGCTCCCCACTCGCCTTGAAGCCAAAACCCTCCTCATCTATTCTCTGCTCCGCCTCCCAAAATCAAAACCAAAACACCTCTTCCTCTCTTCAAGCCTTCTCCGCTGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCTCCTCTCCCCGCCGTCGCCGACATCTCCGGTCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTGAGTCTTCTTTGAAGAACTACGCCCCGGATAGCGCCCCGGCGCTTGCCATCAAAGCCACGATCGAAAAGACAAAGAGGCGATTTGCCTTCTATGGGAAACAAGGGCTTCTTTGTGGTGCTGATGGCTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATTACTCCTGGATTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGAAAAGAAACCTACCCAAAAGGAGATTATCATTGATGTTCCTTTGGCCACTAGTTTGGTGTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAAGATGTCTAA

Coding sequence (CDS)

ATGTCTCTCACAATCCCCACTAACCTCTCAAAACCCCTCTTGAAGCCCAAATTTAGCTCCCCACTCGCCTTGAAGCCAAAACCCTCCTCATCTATTCTCTGCTCCGCCTCCCAAAATCAAAACCAAAACACCTCTTCCTCTCTTCAAGCCTTCTCCGCTGCCTTGGCTCTCTCCTCCATCCTCCTCTCCGCTCCTCTCCCCGCCGTCGCCGACATCTCCGGTCTCACCCCCTGCAAGGAATCCAAGCAATTCGCCAAGAGGGAGAAGCAGCAGATCAAGAAACTTGAGTCTTCTTTGAAGAACTACGCCCCGGATAGCGCCCCGGCGCTTGCCATCAAAGCCACGATCGAAAAGACAAAGAGGCGATTTGCCTTCTATGGGAAACAAGGGCTTCTTTGTGGTGCTGATGGCTTGCCTCATTTGATTGTGAGTGGTGACCAGAGGCATTGGGGTGAGTTCATTACTCCTGGATTCTTGTTCCTTTACATTGCTGGGTGGATTGGATGGGTTGGAAGGAGCTACTTAATCGCCATTAGAGATGAAAAGAAACCTACCCAAAAGGAGATTATCATTGATGTTCCTTTGGCCACTAGTTTGGTGTTTAGAGGCTTCAGCTGGCCTGTTGCTGCTTACAGAGAGCTTGTCAATGGTGAACTCATTGCCAAAGATGTCTAA

Protein sequence

MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV*
Homology
[Close]
BLAST of Csa1G714680 vs. Swiss-Prot
Match: PSAF_FLATR (Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia GN=PSAF PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.2e-89
Identity = 175/228 (76.75%), Postives = 192/228 (84.21%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPL-LKPKFSSPLALKPK-PSSSILCSASQNQNQNTS---SSLQAFSAAL 60
           MS TI T+  +PL +    SSP+  K K  S+SI+CS S ++  N +   SSL+A SAAL
Sbjct: 1   MSFTISTSFLQPLEISNLKSSPITSKSKVTSTSIVCSGSTDEKINNADGKSSLKALSAAL 60

Query: 61  ALSSILLSAPLPAV---ADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAI 120
           ALSSIL+S+ +PA+   ADISGLTPCKESKQFAKREKQ +KKLESSLK YAPDSAPALAI
Sbjct: 61  ALSSILVSSTVPALPASADISGLTPCKESKQFAKREKQSLKKLESSLKLYAPDSAPALAI 120

Query: 121 KATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 180
           KAT+EKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 121 KATMEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 180

Query: 181 SYLIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           SYLIAIRDEKKPTQKEIIIDVPLAT L+FRGFSWPVAAYRE +NGELI
Sbjct: 181 SYLIAIRDEKKPTQKEIIIDVPLATKLLFRGFSWPVAAYREYLNGELI 228

[Close]
BLAST of Csa1G714680 vs. Swiss-Prot
Match: PSAF_ARATH (Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana GN=PSAF PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.1e-88
Identity = 167/225 (74.22%), Postives = 188/225 (83.56%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALK-PKPSSSILCSASQNQNQNTSSSLQAFSAALALSS 60
           MSLTIP NL   +L P+ +  L    PK S+  +CS  ++ + +T  S++AFSAA+ALSS
Sbjct: 1   MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSS-STPQSMKAFSAAVALSS 60

Query: 61  ILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKT 120
           ILLSAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALA+ A IEKT
Sbjct: 61  ILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKT 120

Query: 121 KRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 180
           KRRF  YGK GLLCG+DGLPHLIV+GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI 
Sbjct: 121 KRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIS 180

Query: 181 DEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
            EKKP  KEIIIDVPLA+ ++FRGF WPVAAYRE +NG+LIAKDV
Sbjct: 181 GEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221

[Close]
BLAST of Csa1G714680 vs. Swiss-Prot
Match: PSAF_SPIOL (Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN=PSAF PE=1 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 2.2e-85
Identity = 168/229 (73.36%), Postives = 184/229 (80.35%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLL-KPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAF----SAAL 60
           MS TIPTNL KPL  KPK  S  +  P+  S I+C    +Q Q     L       +AAL
Sbjct: 1   MSFTIPTNLYKPLATKPKHLSSSSFAPR--SKIVCQQENDQQQPKKLELAKVGANAAAAL 60

Query: 61  ALSSILLS----APLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA 120
           ALSS+LLS    AP  A+ADI+GLTPCKESKQFAKREKQ +KKL++SLK YA DSAPALA
Sbjct: 61  ALSSVLLSSWSVAPDAAMADIAGLTPCKESKQFAKREKQALKKLQASLKLYADDSAPALA 120

Query: 121 IKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG 180
           IKAT+EKTK+RF  YGK GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVG
Sbjct: 121 IKATMEKTKKRFDNYGKYGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVG 180

Query: 181 RSYLIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELI 221
           RSYLIAIRDEKKPTQKEIIIDVPLA+SL+FRGFSWPVAAYREL+NGEL+
Sbjct: 181 RSYLIAIRDEKKPTQKEIIIDVPLASSLLFRGFSWPVAAYRELLNGELV 227

[Close]
BLAST of Csa1G714680 vs. Swiss-Prot
Match: PSAF_HORVU (Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=PSAF PE=1 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 3.9e-79
Identity = 149/215 (69.30%), Postives = 168/215 (78.14%), Query Frame = 1 

Query: 19  SSPLALKPKPSSSILCSASQNQNQNT------SSSLQAFSAALALSSILLSA----PLPA 78
           + P   +P    S+ CSAS   N N+      S+S++ FSAALALSS+LLS+    P PA
Sbjct: 16  AKPRLSRPPARLSVSCSASSGDNNNSTATPSLSASIKTFSAALALSSVLLSSAATSPPPA 75

Query: 79  VADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGK 138
            ADI+GLTPCKESK FAKREKQ +KKL SSLK YAPDSAPALAI+ATI+KTKRRF  YGK
Sbjct: 76  AADIAGLTPCKESKAFAKREKQSVKKLNSSLKKYAPDSAPALAIQATIDKTKRRFENYGK 135

Query: 139 QGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKE 198
            GLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLIA+  EKKP  +E
Sbjct: 136 FGLLCGSDGLPHLIVSGDQRHWGEFITPGVLFLYIAGWIGWVGRSYLIAVSGEKKPAMRE 195

Query: 199 IIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
           IIIDV LA  ++ RGF WPVAAYREL+NG+L+  D
Sbjct: 196 IIIDVELAARIIPRGFIWPVAAYRELINGDLVVDD 230

[Close]
BLAST of Csa1G714680 vs. Swiss-Prot
Match: PSAF_CHLRE (Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinhardtii GN=PSAF PE=1 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-52
Identity = 111/211 (52.61%), Postives = 142/211 (67.30%), Query Frame = 1 

Query: 17  KFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSILLSAPLPAVADISGLT 76
           K SS +A   + +  + C A +N+  +   +  A SA  A  ++ LSAP  A+ADI+GLT
Sbjct: 11  KASSRVAPSSRRALRVACQAQKNETASKVGTALAASALAA--AVSLSAPSAAMADIAGLT 70

Query: 77  PCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTKRRFAFYGKQGLLCGAD 136
           PC ESK +AK EK+++K LE  LK Y  DSAPA+A+KAT+E+TK RFA Y K GLLCG D
Sbjct: 71  PCSESKAYAKLEKKELKTLEKRLKQYEADSAPAVALKATMERTKARFANYAKAGLLCGND 130

Query: 137 GLPHLI----VSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIID 196
           GLPHLI    ++    H GE   P F FLY+AG+IG+VGR YLIA++ E KPT KEIIID
Sbjct: 131 GLPHLIADPGLALKYGHAGEVFIPTFGFLYVAGYIGYVGRQYLIAVKGEAKPTDKEIIID 190

Query: 197 VPLATSLVFRGFSWPVAAYRELVNGELIAKD 224
           VPLAT L ++G  WP+AA +EL  G L+ K+
Sbjct: 191 VPLATKLAWQGAGWPLAAVQELQRGTLLEKE 219

[Close]
BLAST of Csa1G714680 vs. TrEMBL
Match: A0A0A0M3X2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G714680 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-121
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

[Close]
BLAST of Csa1G714680 vs. TrEMBL
Match: M5WHJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010953mg PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.0e-102
Identity = 197/230 (85.65%), Postives = 209/230 (90.87%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQ-----NTSSSLQAFSAAL 60
           MSLTIPTNLSKP+LKPKFSSPLA K  P + + CSASQ  N      +T+S +QAFSAAL
Sbjct: 1   MSLTIPTNLSKPMLKPKFSSPLATK-LPRTVVFCSASQTPNPTPEKISTASPMQAFSAAL 60

Query: 61  ALSSILL-SAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKA 120
           ALSSILL SAP+PAVADI+GLTPCK+SKQFAKREKQQIKKLESSLK YAPDSAPALAI A
Sbjct: 61  ALSSILLGSAPMPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAINA 120

Query: 121 TIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSY 180
           TIEKT+RRFA YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSY
Sbjct: 121 TIEKTQRRFANYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSY 180

Query: 181 LIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           LIAIRD+KKPTQKEIIIDVPLATSLVFRGF WPVAAYRELVNGELIAKDV
Sbjct: 181 LIAIRDDKKPTQKEIIIDVPLATSLVFRGFIWPVAAYRELVNGELIAKDV 229

[Close]
BLAST of Csa1G714680 vs. TrEMBL
Match: A0A067KCM0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07458 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-99
Identity = 190/228 (83.33%), Postives = 200/228 (87.72%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQN----QNQNTSSSLQAFSAALA 60
           MSLTIPTNLSKP+LKPK  S L       S I+CSASQN    +  ++ S LQAFSAALA
Sbjct: 1   MSLTIPTNLSKPMLKPKLGSSLNPAKSSRSLIVCSASQNSSTQEKDSSKSPLQAFSAALA 60

Query: 61  LSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATI 120
           LSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLK YAPDSAPALAI+ATI
Sbjct: 61  LSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKLYAPDSAPALAIQATI 120

Query: 121 EKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLI 180
           EKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLI
Sbjct: 121 EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLI 180

Query: 181 AIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           AI DEKKP  KEIIIDVPLAT L+FRGFSWPVAAYREL+NGEL+ KDV
Sbjct: 181 AISDEKKPAMKEIIIDVPLATRLIFRGFSWPVAAYRELLNGELVVKDV 228

[Close]
BLAST of Csa1G714680 vs. TrEMBL
Match: B9RRQ0_RICCO (Photosystem I reaction center subunit III, chloroplast, putative OS=Ricinus communis GN=RCOM_1426230 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.6e-98
Identity = 188/228 (82.46%), Postives = 200/228 (87.72%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQN----QNQNTSSSLQAFSAALA 60
           MSLTIP+NLSKP+LKPK  S L  +   SS I+CSASQ     +  ++ S LQAFSAALA
Sbjct: 1   MSLTIPSNLSKPMLKPKLGSSLTPR---SSMIVCSASQTPSTQEKDSSKSPLQAFSAALA 60

Query: 61  LSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATI 120
           LSSILLSAPLPAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAPDSAPALAIKAT+
Sbjct: 61  LSSILLSAPLPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAIKATV 120

Query: 121 EKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLI 180
           EKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSYLI
Sbjct: 121 EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSYLI 180

Query: 181 AIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           AIR EKKP  KEIIIDVPLAT L+FRGFSWPVAAYRE VNGEL+ KDV
Sbjct: 181 AIRGEKKPAMKEIIIDVPLATGLIFRGFSWPVAAYREFVNGELVVKDV 225

[Close]
BLAST of Csa1G714680 vs. TrEMBL
Match: Q9XQB4_VIGRR (Photosystem I reaction center subunit III OS=Vigna radiata var. radiata GN=CipPsaF PE=2 SV=2)

HSP 1 Score: 361.7 bits (927), Expect = 6.5e-97
Identity = 189/229 (82.53%), Postives = 200/229 (87.34%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPL-LKPKFSSPLALKPKPSSSILCSASQNQNQ----NTSSSLQAFSAAL 60
           MSLTIPTNLSKP  L+PK  S L        +I+CSA+ N N     N SS L+AFSAAL
Sbjct: 1   MSLTIPTNLSKPAALRPKLGSKLR------PTIVCSATPNNNSDNNNNISSDLKAFSAAL 60

Query: 61  ALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKAT 120
           ALSSILLSAPLPAVADISGLTPCKESKQFAKREKQ IKKLESSLK YAPDSAPALAIKA+
Sbjct: 61  ALSSILLSAPLPAVADISGLTPCKESKQFAKREKQSIKKLESSLKLYAPDSAPALAIKAS 120

Query: 121 IEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYL 180
           +EKTKRRF  Y KQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYL
Sbjct: 121 VEKTKRRFDNYAKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYL 180

Query: 181 IAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           IAIRDEKKPT KEIIIDVPLA+ L+FRGFSWPVAAYREL+NG+LIAKDV
Sbjct: 181 IAIRDEKKPTMKEIIIDVPLASRLLFRGFSWPVAAYRELINGDLIAKDV 223

[Close]
BLAST of Csa1G714680 vs. TAIR10
Match: AT1G31330.1 (AT1G31330.1 photosystem I subunit F)

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-89
Identity = 167/225 (74.22%), Postives = 188/225 (83.56%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALK-PKPSSSILCSASQNQNQNTSSSLQAFSAALALSS 60
           MSLTIP NL   +L P+ +  L    PK S+  +CS  ++ + +T  S++AFSAA+ALSS
Sbjct: 1   MSLTIPANL---VLNPRSNKSLTQSVPKSSARFVCSDDKSSS-STPQSMKAFSAAVALSS 60

Query: 61  ILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKT 120
           ILLSAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALA+ A IEKT
Sbjct: 61  ILLSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALALNAQIEKT 120

Query: 121 KRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIR 180
           KRRF  YGK GLLCG+DGLPHLIV+GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAI 
Sbjct: 121 KRRFDNYGKYGLLCGSDGLPHLIVNGDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIS 180

Query: 181 DEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
            EKKP  KEIIIDVPLA+ ++FRGF WPVAAYRE +NG+LIAKDV
Sbjct: 181 GEKKPAMKEIIIDVPLASRIIFRGFIWPVAAYREFLNGDLIAKDV 221

[Close]
BLAST of Csa1G714680 vs. NCBI nr
Match: gi|449465832|ref|XP_004150631.1| (PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 2.4e-121
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60
           MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSSI 60

Query: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120
           LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK
Sbjct: 61  LLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEKTK 120

Query: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180
           RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD
Sbjct: 121 RRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRD 180

Query: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 224

[Close]
BLAST of Csa1G714680 vs. NCBI nr
Match: gi|659118354|ref|XP_008459076.1| (PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis melo])

HSP 1 Score: 427.6 bits (1098), Expect = 1.4e-116
Identity = 218/226 (96.46%), Postives = 222/226 (98.23%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSA--SQNQNQNTSSSLQAFSAALALS 60
           MSLTIPTNLSKPLLKPK SSPLALKPKPSSSILCSA  +QNQ+QN SSSLQAFSAALALS
Sbjct: 1   MSLTIPTNLSKPLLKPKLSSPLALKPKPSSSILCSAFPNQNQSQNPSSSLQAFSAALALS 60

Query: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKATIEK 120
           SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLES+LKNYAPDSAPALAIKATIEK
Sbjct: 61  SILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESALKNYAPDSAPALAIKATIEK 120

Query: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180
           TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI
Sbjct: 121 TKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAI 180

Query: 181 RDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           R+EKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV
Sbjct: 181 RNEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 226

[Close]
BLAST of Csa1G714680 vs. NCBI nr
Match: gi|595867592|ref|XP_007211985.1| (hypothetical protein PRUPE_ppa010953mg [Prunus persica])

HSP 1 Score: 379.4 bits (973), Expect = 4.3e-102
Identity = 197/230 (85.65%), Postives = 209/230 (90.87%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQ-----NTSSSLQAFSAAL 60
           MSLTIPTNLSKP+LKPKFSSPLA K  P + + CSASQ  N      +T+S +QAFSAAL
Sbjct: 1   MSLTIPTNLSKPMLKPKFSSPLATK-LPRTVVFCSASQTPNPTPEKISTASPMQAFSAAL 60

Query: 61  ALSSILL-SAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKA 120
           ALSSILL SAP+PAVADI+GLTPCK+SKQFAKREKQQIKKLESSLK YAPDSAPALAI A
Sbjct: 61  ALSSILLGSAPMPAVADIAGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAINA 120

Query: 121 TIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSY 180
           TIEKT+RRFA YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSY
Sbjct: 121 TIEKTQRRFANYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSY 180

Query: 181 LIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           LIAIRD+KKPTQKEIIIDVPLATSLVFRGF WPVAAYRELVNGELIAKDV
Sbjct: 181 LIAIRDDKKPTQKEIIIDVPLATSLVFRGFIWPVAAYRELVNGELIAKDV 229

[Close]
BLAST of Csa1G714680 vs. NCBI nr
Match: gi|645238531|ref|XP_008225720.1| (PREDICTED: photosystem I reaction center subunit III, chloroplastic [Prunus mume])

HSP 1 Score: 378.6 bits (971), Expect = 7.4e-102
Identity = 197/230 (85.65%), Postives = 208/230 (90.43%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQ-----NTSSSLQAFSAAL 60
           MSLTIPTNLSKP+LKPK SSPLA K  P + + CSASQ  N      +T+S +QAFSAAL
Sbjct: 1   MSLTIPTNLSKPMLKPKLSSPLATK-LPRTMVFCSASQTPNPTPEKISTASPMQAFSAAL 60

Query: 61  ALSSILL-SAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKA 120
           ALSSILL SAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAPDSAPALAI A
Sbjct: 61  ALSSILLGSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAINA 120

Query: 121 TIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSY 180
           TIEKT+RRFA YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSY
Sbjct: 121 TIEKTQRRFANYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSY 180

Query: 181 LIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           LIAIRD+KKPTQKEIIIDVPLATSLVFRGF WPVAAYRELVNGELIAKDV
Sbjct: 181 LIAIRDDKKPTQKEIIIDVPLATSLVFRGFIWPVAAYRELVNGELIAKDV 229

[Close]
BLAST of Csa1G714680 vs. NCBI nr
Match: gi|694392906|ref|XP_009371913.1| (PREDICTED: photosystem I reaction center subunit III, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 376.7 bits (966), Expect = 2.8e-101
Identity = 193/230 (83.91%), Postives = 209/230 (90.87%), Query Frame = 1 

Query: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQNQNQ-----NTSSSLQAFSAAL 60
           MSLTIPTNLSKP+ +PK SSP+A K  P + + CSASQN N      +T+S +QAFS AL
Sbjct: 1   MSLTIPTNLSKPMFQPKLSSPVATK-LPRTVVFCSASQNPNPTPEKISTASPMQAFSTAL 60

Query: 61  ALSSILL-SAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAIKA 120
           ALSSIL+ SAP+PAVADISGLTPCK+SKQFAKREKQQIKKLESSLK YAPDSAPALAIKA
Sbjct: 61  ALSSILIGSAPMPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAIKA 120

Query: 121 TIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGRSY 180
           TIEKT+RRF+ YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGRSY
Sbjct: 121 TIEKTQRRFSNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGRSY 180

Query: 181 LIAIRDEKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELIAKDV 225
           LIAIRD+KKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGEL+AKDV
Sbjct: 181 LIAIRDDKKPTQKEIIIDVPLATSLVFRGFSWPVAAYRELVNGELVAKDV 229

The following BLAST results are available for this feature:
BLAST of Csa1G714680 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PSAF_FLATR3.2e-8976.75Photosystem I reaction center subunit III, chloroplastic OS=Flaveria trinervia G... [more]
PSAF_ARATH2.1e-8874.22Photosystem I reaction center subunit III, chloroplastic OS=Arabidopsis thaliana... [more]
PSAF_SPIOL2.2e-8573.36Photosystem I reaction center subunit III, chloroplastic OS=Spinacia oleracea GN... [more]
PSAF_HORVU3.9e-7969.30Photosystem I reaction center subunit III, chloroplastic OS=Hordeum vulgare GN=P... [more]
PSAF_CHLRE1.4e-5252.61Photosystem I reaction center subunit III, chloroplastic OS=Chlamydomonas reinha... [more]
BLAST of Csa1G714680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M3X2_CUCSA1.7e-121100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G714680 PE=4 SV=1[more]
M5WHJ3_PRUPE3.0e-10285.65Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010953mg PE=4 SV=1[more]
A0A067KCM0_JATCU1.1e-9983.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07458 PE=4 SV=1[more]
B9RRQ0_RICCO2.6e-9882.46Photosystem I reaction center subunit III, chloroplast, putative OS=Ricinus comm... [more]
Q9XQB4_VIGRR6.5e-9782.53Photosystem I reaction center subunit III OS=Vigna radiata var. radiata GN=CipPs... [more]
BLAST of Csa1G714680 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G31330.11.2e-8974.22 photosystem I subunit F[more]
BLAST of Csa1G714680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465832|ref|XP_004150631.1|2.4e-121100.00PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis sat... [more]
gi|659118354|ref|XP_008459076.1|1.4e-11696.46PREDICTED: photosystem I reaction center subunit III, chloroplastic [Cucumis mel... [more]
gi|595867592|ref|XP_007211985.1|4.3e-10285.65hypothetical protein PRUPE_ppa010953mg [Prunus persica][more]
gi|645238531|ref|XP_008225720.1|7.4e-10285.65PREDICTED: photosystem I reaction center subunit III, chloroplastic [Prunus mume... [more]
gi|694392906|ref|XP_009371913.1|2.8e-10183.91PREDICTED: photosystem I reaction center subunit III, chloroplastic-like [Pyrus ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003666PSI_PsaF
Vocabulary: Cellular Component
TermDefinition
GO:0009522photosystem I
GO:0009538photosystem I reaction center
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015979 photosynthesis
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009538 photosystem I reaction center
cellular_component GO:0010287 plastoglobule
cellular_component GO:0009522 photosystem I
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU106862cucumber EST collection version 3.0transcribed_cluster
CU123159cucumber EST collection version 3.0transcribed_cluster
CU139522cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G714680.1Csa1G714680.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU106862CU106862transcribed_cluster
CU139522CU139522transcribed_cluster
CU123159CU123159transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003666Photosystem I PsaF, reaction centre subunit IIIGENE3DG3DSA:1.10.8.110coord: 71..223
score: 2.1
IPR003666Photosystem I PsaF, reaction centre subunit IIIPFAMPF02507PSI_PsaFcoord: 58..223
score: 3.2
IPR003666Photosystem I PsaF, reaction centre subunit IIIunknownSSF81536Subunit III of photosystem I reaction centre, PsaFcoord: 71..223
score: 1.83
NoneNo IPR availablePANTHERPTHR34939FAMILY NOT NAMEDcoord: 2..223
score: 1.1E
NoneNo IPR availablePANTHERPTHR34939:SF1PHOTOSYSTEM I REACTION CENTER SUBUNIT III, CHLOROPLASTICcoord: 2..223
score: 1.1E