Csa1G109340 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G109340
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Charged multivesicular body protein 3; contains IPR005024 (Snf7)
Location	Chr1 : 8828396 .. 8832268 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTTGAGAATGATTTGAAATGTTTTGAATATTAAGTTACATAAAATGATTTGAAGAACCCTTCACGGGACGCCTCCTTCTCACTCTCGGGAATCTCTCTCCCATAAATCTTCTCCCGTCCACCAAATCGACGTCAACTGTCACCGCCGCCGGACATCCCCTCCTCTAGACTTTGATCCTAAGCTTCTCGAGGCTACTAATTTCACTTTGATTCCATTGATCTTAAGCAAGTTCGCAATTCTTTGATCTTCAAAATTTTTGGTAGTCAAAAGGAGAGAGATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGGTAACGGATCGTATTTTCGTATCTTCCGTTTCAATCTTTTTCGTGTTTTCTTTTATGTATCTGTTCCTTGCGAGGTTAAAATTCTGATCATGCCATCCATTCTTCTTCTACCGTTAGGGATTCTTTAATTCTTCATGTGTCTTTTATTTGATTTCTTCTTCTTTGATTGATTTGGGTCAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGTATGTTAAGAACTTGAGGTTATCTCTGTTTAATTTTCTTATTAGGGGTTTCATAATGAAAGACAAATTTCGATCTGGGAAATTTTCTACAAGTTAAGAATATTTAGGGGTATTGAGGTGAAAAATGGGAGAATCTGAAAAATATTAACCAAAGATGTTATATGAAAAATTATTTTCCCTAATGTTCTTTTAATTCGGGAACAAAACGAGGGGACTATTCTGTTCCCTCCCTTGTTTGTTCTTGTGTTTTTGTATAAATCTTATGCCTTGAGGGCAAAGCATGACTTGAAAGTTGGGGGTGGGGTTTGGTTGTGAGAGAATGTGCAGGTTTGCCTATAGCTATTACTACTGTTGCTAAGGCATTACGAAATAAGCCTTCCGACATTTGGAATGATGCCTTAGATCAACTTAAAAGTGGATAACCATCTTATTCATTAATGCACAACGTTTACAACTCTAGAATGAAAAAGGAGACCTTTGTTAGATAACATGCCCTAGATATGATAGTTCATTTTTTAGTTTTGCTGTAAAAAAGGAAAAAAAATTAGGTTCAGAGTAATAGAATCTCATTTTTCTCTCATCCTTCGTAAATCTTTTTTAAAACTTTAATGATAAGTATCTACCACTAATTAAGAATATATTTATGGAATGTCCTACAGCCCCTGCTCGTAATGCATACCAAGCTGTTAGGTATACTGCTGAATAAAGGCCAATGATAAAGCTCGAGTCTACATCTTCGCAAGTCTGTCTGCAGGGTTTTGGTTTTGTTGACAGGAAAACTAAATTGCATGAAATTAAAGTGCACAATAAACTATTGACTATAGTATGAATGCTTGAATTTCATGTAGTGATGTGAGAGTCGATCAAGTTCAAGTTGATAGTCTAAATGGTCTACAGTATAGGAATAGGTAATCACTTTGGGCTGAGGTTTTTTTTTCTCTTAATTTTATAAAAGCTACATCTTTCATGGACAAATATTGCAAGGCTATACACAAAAAGCCAAGCCCCCTAAAAGAGGAACCAAACTTCACTAGGCTCCTTATCCTAAACACTGTTATTCCACTCGTCCAAAAATACTCCAAATTATTATGCACCCAGCAAATCATAAAAGTTGGTCCTTATCACGCAGAAGTGGATGGGATGAACTCTCCAATCAACTATAATCATTTACATTGCTGAGTTTCTTTTTGTTCCACTGGTACCTTAGATGGCTGGGTTCAGTTTGACATTGAGGTTTCCTATATATCTGGAATGTATTTATGTGATATTATCTAAATTCTCAGTGGACTAGGGAAAATGATCTATGAATTAGTACACTGGACCTAATCTCTAATTGTTTCAGCATGGGGTTATGTTCTATCTCTTGCTTAATATTGCCATTTATGTGTTTCAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTACATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGGTACGATGTTTTCCATATTTTAAAGCTTGAAAATTCTTCTTGGTCCCTTTGCTGTTTTATCTTCTACAACCTAACTAAATGCTTTGTGGAGTCTGAGAGATAATTTGGTGATTATGAATCCATGACAAACTCTGTAATATAGCTAAAGTTTATTGTAAACAATAGTTTGCTGAAGATATACATGCATGCATGCATATATATATGTAAAGATATATTTTTTGCTTATGTTATCAATTGAATACGATAGAAAAGCTTGAATACAGATAGAAAAGCTTGAATTGGTATGAAATTTAGAAGTATAAGGACGGAAGGTGGCGGAAGGGATTCTTACTTAGCTCAATTTACAACAACTTTTTATATCGTAGCACAACATAATATTACCATTGTTGAAAGTCTACCAATTTTGCAGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGTATCTTTTTTAAGAATATAAACAATTTCTTACTTTCTCCTTGGTCAAGGCTATGAATTTAGAGGCTTGGAGCTGACACAAGACTTGATTGAACATTATTTGTTCGGTTCTTTTTTGTGTGGGTAGAAATCTTTTTTTATCAAGTTACAATGTGTTTATCCCGGTTCCATAACTTGGTTTATCTTTTATTGTCATTGGGAGAATGAGGAAATAATTTTATCTTTTATTTATAGAAACATAGTTAACTTTGTTCAACACCAAAAGGAAAAAGCCTAAGGTTTGAGGTGGAGAGAACCTCCTCCAAAGAGACTATAAGAGAGAGCCTACTAATTGTACAAAATTATGAGGAGTCTATAATTACAAAAGGATGTTTTGTGGTTGGAGCTCCAACACAACTTTGTGTACGACCCGTTTGTTAAATCCTCATGCTCCTTTGTTTGTAAACATTTATCGAAAGGATACTTGCTTGTAGCCTTATTGTCAAGTTTTTGTTCTCTGTTTAACTTACCAATTGCCACTAAATTTATATGTTTTCTTTAGAAAGTGTTATAATACAATTATTAATGTAGCTAGTTTTTTATATACTGTATCTATAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGTATCTATTGCATAATTTTGAGCACCCACGTTCTATTCCTACGATGGTTATGTACAGGAAAAGTATTGTGACATTTATTTCTTTTGCAGGAAGCAATAGCTGAGGGCATTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAAATTCAATATTTCACATAAAAATGTAAAATTGGCTGTAGCTCAATTTGAGTGTCAACGGTACTTGTCCTGGCATATAATGAGAGAAAATAAGCGACATACCAAACTTTCTCTTGCTCATGTTTGTGTGATCTGAGATTATATTTATCAAATAGATAGGGAGAGGGTGGAGGTGGAGACGGAAACTAACCGTTTGATGTATATTGTATCTAATCTCTTATTTAAATGAAAATGATGCATT

mRNA sequence

ATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTACATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGAAGCAATAGCTGAGGGCATTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAA

Coding sequence (CDS)

ATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTACATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGAAGCAATAGCTGAGGGCATTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAA

Protein sequence

MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS*

Homology

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BLAST of Csa1G109340 vs. Swiss-Prot
Match: VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana GN=VPS24-1 PE=1 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.7e-104
Identity = 193/229 (84.28%), Postives = 216/229 (94.32%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           ME+VMNI+KPKP+P+Q LRDWQR+LRQECRN+ERQIRDIQ+EE+NVQKAI++AAKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKEIV S++TVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAP+MA TMQEFSKEMTKAGVIEEFVN+A+D+ALDSED+EEEI+EEVDKVLTAIAGETAA
Sbjct: 121 KAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAH-VQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           +LP AVRKE++K PA      REEEA+AEG+DDEEELEEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

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BLAST of Csa1G109340 vs. Swiss-Prot
Match: VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana GN=VPS24-2 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73
Identity = 147/198 (74.24%), Postives = 170/198 (85.86%), Query Frame = 1


Query: 32  VERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISM 91
           ++  + DI+REE+NV KAI+D+ KRND+V+AKALA+EIV S++TV RL+ENKAQ+NSISM
Sbjct: 3   IKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISM 62

Query: 92  HLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVD 151
           HLGES+A A TVG+LSKS EVMKLVN+LMKAPE+A TMQ FSKEMTK GVIEEFV+DAVD
Sbjct: 63  HLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVD 122

Query: 152 SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMKQPAHVQE-VREEEAIAEGI 211
           +ALDSEDIEEEIEEEVDKVLTAIAGETAA+LPEAVRK+KM  PA   E +  E+AI EG+
Sbjct: 123 NALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGV 182

Query: 212 DDEEELEEIRARLAKVRS 229
           D EEELE IR RLA VRS
Sbjct: 183 DAEEELEAIRYRLANVRS 200

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BLAST of Csa1G109340 vs. Swiss-Prot
Match: CHMP3_RAT (Charged multivesicular body protein 3 OS=Rattus norvegicus GN=Chmp3 PE=1 SV=3)

HSP 1 Score: 172.2 bits (435), Expect = 6.7e-42
Identity = 89/215 (41.40%), Postives = 137/215 (63.72%), Query Frame = 1


Query: 14  PQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSK 73
           P++ + +W  ++R+E R V+RQIRDIQREE+ V+++++DAAK+        LAKE++RS+
Sbjct: 12  PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSR 71

Query: 74  KTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFS 133
           K V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK + +L+K PE+  TM+E S
Sbjct: 72  KAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELS 131

Query: 134 KEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMKQ 193
           KEM KAG+IEE + D  +S  D E++EE  E E+D++L  I      + P  V  + + +
Sbjct: 132 KEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKV-TDALPE 191

Query: 194 PAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           P     +   E   E  DDEE+LE +++RLA +RS
Sbjct: 192 PEPAGAMAASEGDEE--DDEEDLEAMQSRLATLRS 223

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BLAST of Csa1G109340 vs. Swiss-Prot
Match: CHMP3_MOUSE (Charged multivesicular body protein 3 OS=Mus musculus GN=Chmp3 PE=1 SV=3)

HSP 1 Score: 171.8 bits (434), Expect = 8.8e-42
Identity = 90/216 (41.67%), Postives = 137/216 (63.43%), Query Frame = 1


Query: 14  PQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSK 73
           P++ + +W  ++R+E R V+RQIRDIQREE+ V+++++DAAK+        LAKE++RS+
Sbjct: 12  PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSR 71

Query: 74  KTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFS 133
           K V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK + +L+K PE+  TM+E S
Sbjct: 72  KAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELS 131

Query: 134 KEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMK- 193
           KEM KAG+IEE + D  +S  D E++EE  E E+D++L  I      + P  V     + 
Sbjct: 132 KEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEP 191

Query: 194 QPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           +PA      EE    E  +DEE+LE +++RLA +RS
Sbjct: 192 EPAGAMAASEE---GEEEEDEEDLEAMQSRLATLRS 224

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BLAST of Csa1G109340 vs. Swiss-Prot
Match: CHMP3_PONAB (Charged multivesicular body protein 3 OS=Pongo abelii GN=CHMP3 PE=2 SV=3)

HSP 1 Score: 169.5 bits (428), Expect = 4.3e-41
Identity = 88/216 (40.74%), Postives = 137/216 (63.43%), Query Frame = 1


Query: 14  PQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSK 73
           P++ + +W  ++R+E R V+RQIRDIQREE+ V+++++DAAK+        LAKE++RS+
Sbjct: 12  PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCVVLAKEMIRSR 71

Query: 74  KTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFS 133
           K V++L+ +KA +NS+ M +   +A+ R  G L KS EVMK + +L+K PE+  TM+E S
Sbjct: 72  KAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELS 131

Query: 134 KEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMK- 193
           KEM KAG+IEE + D  +S  D E++EEE E E+D++L  I      + P  V     + 
Sbjct: 132 KEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEP 191

Query: 194 QPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           +P+      E+E      ++EE LE +++RLA +RS
Sbjct: 192 EPSGAMAASEDEE-----EEEEALEAMQSRLATLRS 222

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BLAST of Csa1G109340 vs. TrEMBL
Match: A0A0A0LXU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109340 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 3.6e-119
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA
Sbjct: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 228

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BLAST of Csa1G109340 vs. TrEMBL
Match: F6GW93_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00540 PE=3 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 2.9e-108
Identity = 207/228 (90.79%), Postives = 217/228 (95.18%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWQR+LRQECRN+ERQIRDIQREEK VQKAIR+AAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAK LA EIVRS++TVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKTLAMEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEE VNDAVD+ALDSEDIEEEIEEEVDKVLTAIAGETAA
Sbjct: 121 KAPEVAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEEEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKE++KQPA   E  +EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERVKQPAQTAEADDEEAIAEGADDEEELEEIRARLAKVRS 228

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BLAST of Csa1G109340 vs. TrEMBL
Match: A0A061GYA2_THECC (SNF7 family protein isoform 2 OS=Theobroma cacao GN=TCM_042150 PE=3 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 1.9e-107
Identity = 206/228 (90.35%), Postives = 221/228 (96.93%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNI+KPKPNPQQQLRDWQRRLRQECRN+ERQIRDIQREE+NVQKAIR+AAKRNDMV
Sbjct: 1   MEKVMNIIKPKPNPQQQLRDWQRRLRQECRNIERQIRDIQREERNVQKAIREAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKEIVRS++TVNRL+ENKAQ+NSISMHLGESVAIA TVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKEIVRSRRTVNRLYENKAQMNSISMHLGESVAIALTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEEFV+DA+D+ALDSEDIEEEIEEEVDKVLT+IAGETAA
Sbjct: 121 KAPEVAVTMQEFSKEMTKAGVIEEFVDDALDNALDSEDIEEEIEEEVDKVLTSIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPA     +EEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAQTTP-QEEEAIAEGVDDEEELEEIRARLAKVRS 227

[Close]

BLAST of Csa1G109340 vs. TrEMBL
Match: V7AFF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G085100g PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-107
Identity = 205/228 (89.91%), Postives = 217/228 (95.18%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNILKPKPNPQQ LRDWQRRLRQECRN+ERQIRDIQREEKNVQKAIR+AAKRNDM 
Sbjct: 1   MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMG 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKE+VRS+KTVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPEMA TMQEFSKEMTKAGVIEE VNDAVDSALDSEDIE+EIEEEVDKVLTAIAGETAA
Sbjct: 121 KAPEMAVTMQEFSKEMTKAGVIEEMVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVR+E++KQP       EEEAIAEG+DDEEE+EEIRARLAKVRS
Sbjct: 181 QLPEAVRRERVKQPGQSVGASEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Csa1G109340 vs. TrEMBL
Match: A0A0D2RMP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G145500 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 4.1e-107
Identity = 206/228 (90.35%), Postives = 219/228 (96.05%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMN++KPKPNPQQ LRDWQRRLRQECRN+ERQIRDIQREEKNVQKAI+DAAKRNDMV
Sbjct: 1   MEKVMNMIKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAK+LA EIVRS++TVNRL+ENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKSLAMEIVRSRRTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEEFVNDA+D+ALDSEDIEEE EEEVDKVLTAIAGETAA
Sbjct: 121 KAPEVAVTMQEFSKEMTKAGVIEEFVNDALDNALDSEDIEEETEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPA     +EEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAQ-PAAQEEEAIAEGVDDEEELEEIRARLAKVRS 227

[Close]

BLAST of Csa1G109340 vs. TAIR10
Match: AT5G22950.1 (AT5G22950.1 SNF7 family protein)

HSP 1 Score: 378.6 bits (971), Expect = 2.7e-105
Identity = 193/229 (84.28%), Postives = 216/229 (94.32%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           ME+VMNI+KPKP+P+Q LRDWQR+LRQECRN+ERQIRDIQ+EE+NVQKAI++AAKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKEIV S++TVNRL+ENKAQ+NSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAP+MA TMQEFSKEMTKAGVIEEFVN+A+D+ALDSED+EEEI+EEVDKVLTAIAGETAA
Sbjct: 121 KAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAH-VQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           +LP AVRKE++K PA      REEEA+AEG+DDEEELEEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

[Close]

BLAST of Csa1G109340 vs. TAIR10
Match: AT3G45000.1 (AT3G45000.1 SNF7 family protein)

HSP 1 Score: 277.7 bits (709), Expect = 6.4e-75
Identity = 147/198 (74.24%), Postives = 170/198 (85.86%), Query Frame = 1


Query: 32  VERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISM 91
           ++  + DI+REE+NV KAI+D+ KRND+V+AKALA+EIV S++TV RL+ENKAQ+NSISM
Sbjct: 3   IKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISM 62

Query: 92  HLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVD 151
           HLGES+A A TVG+LSKS EVMKLVN+LMKAPE+A TMQ FSKEMTK GVIEEFV+DAVD
Sbjct: 63  HLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAVD 122

Query: 152 SALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMKQPAHVQE-VREEEAIAEGI 211
           +ALDSEDIEEEIEEEVDKVLTAIAGETAA+LPEAVRK+KM  PA   E +  E+AI EG+
Sbjct: 123 NALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEGV 182

Query: 212 DDEEELEEIRARLAKVRS 229
           D EEELE IR RLA VRS
Sbjct: 183 DAEEELEAIRYRLANVRS 200

[Close]

BLAST of Csa1G109340 vs. TAIR10
Match: AT1G03950.1 (AT1G03950.1 vacuolar protein sorting-associated protein 2.3)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 64/223 (28.70%), Postives = 116/223 (52.02%), Query Frame = 1


Query: 5   MNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKA 64
           MNI   KPNP++ LR+ +R + Q  R +E++I  +Q EEK +   I+  AK  +  + K 
Sbjct: 1   MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKI 60

Query: 65  LAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPE 124
           LA++++R ++ +  L  ++AQ+  I+ H     A       +  + + M  ++  M   +
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAK 120

Query: 125 MAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPE 184
            AK M+EF K+  +  +  E ++D++D ALD+++ E+E E+  ++VL  I  + A+QL  
Sbjct: 121 QAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSS 180

Query: 185 AVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVR 228
           A +         +   + E+  + GID      E+  RLA +R
Sbjct: 181 APK-------GKIGGKKAEDVGSSGID------ELEKRLAALR 210

[Close]

BLAST of Csa1G109340 vs. TAIR10
Match: AT5G44560.1 (AT5G44560.1 SNF7 family protein)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-22
Identity = 61/223 (27.35%), Postives = 107/223 (47.98%), Query Frame = 1


Query: 5   MNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKA 64
           MNI K K  P+  LR  +R +    R +ER+I  +Q EEK +   I+  AK  +  + K 
Sbjct: 1   MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKI 60

Query: 65  LAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPE 124
           LA+++VR ++ +  L  ++AQ+  ++ H     A       +  + + M  +N  M   +
Sbjct: 61  LARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTK 120

Query: 125 MAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPE 184
            AK +++F K+  +  +  E +++A+D  LD ++ EEE E+  ++VL  I    A+QL  
Sbjct: 121 QAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSS 180

Query: 185 AVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVR 228
           A    K +            A      +  E++E+  RLA +R
Sbjct: 181 A---PKGRIATKTAAPPASTAATNKNSESSEVDELEKRLASLR 220

[Close]

BLAST of Csa1G109340 vs. TAIR10
Match: AT2G06530.1 (AT2G06530.1 SNF7 family protein)

HSP 1 Score: 101.3 bits (251), Expect = 8.2e-22
Identity = 63/224 (28.12%), Postives = 121/224 (54.02%), Query Frame = 1


Query: 6   NILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKAL 65
           +I   +  P + LR+ +R L +  R +ER+ + +Q +EK +   I+  AK+  M + K +
Sbjct: 4   SIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVM 63

Query: 66  AKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPE 125
           AK+++R++  + + ++ K+QL  +S+ + +++   + +G   K   + M  +N  M  P 
Sbjct: 64  AKDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 123

Query: 126 MAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPE 185
           + K MQEF ++  K  ++ E + DA+D AL+ ++ EEE E+ V +VL  I  +   +L  
Sbjct: 124 LQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVN 183

Query: 186 AVRKEKMKQPAHVQEVREEEAIAEGIDDEEELE-EIRARLAKVR 228
           A     +  PA   +V + E  A G +D   ++ +++ARL  +R
Sbjct: 184 A-PSGAVAVPAAKNKVVQAE--ATGAEDSGGIDSDLQARLDNLR 223

[Close]

BLAST of Csa1G109340 vs. NCBI nr
Match: gi|449459120|ref|XP_004147294.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sativus])

HSP 1 Score: 435.6 bits (1119), Expect = 5.2e-119
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA
Sbjct: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 228

[Close]

BLAST of Csa1G109340 vs. NCBI nr
Match: gi|659072004|ref|XP_008463000.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 5.7e-118
Identity = 225/228 (98.68%), Postives = 227/228 (99.56%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEK+MNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNV KAIRDAAKRNDMV
Sbjct: 1   MEKMMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVHKAIRDAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA
Sbjct: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPAHVQEVREEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 228

[Close]

BLAST of Csa1G109340 vs. NCBI nr
Match: gi|225436486|ref|XP_002275903.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Vitis vinifera])

HSP 1 Score: 399.4 bits (1025), Expect = 4.1e-108
Identity = 207/228 (90.79%), Postives = 217/228 (95.18%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWQR+LRQECRN+ERQIRDIQREEK VQKAIR+AAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAK LA EIVRS++TVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKTLAMEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEE VNDAVD+ALDSEDIEEEIEEEVDKVLTAIAGETAA
Sbjct: 121 KAPEVAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEEEIEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKE++KQPA   E  +EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERVKQPAQTAEADDEEAIAEGADDEEELEEIRARLAKVRS 228

[Close]

BLAST of Csa1G109340 vs. NCBI nr
Match: gi|297734917|emb|CBI17151.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 399.4 bits (1025), Expect = 4.1e-108
Identity = 207/228 (90.79%), Postives = 217/228 (95.18%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWQR+LRQECRN+ERQIRDIQREEK VQKAIR+AAKRNDMV
Sbjct: 32  MEKVMNILKPKPNPQQQLRDWQRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMV 91

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAK LA EIVRS++TVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM
Sbjct: 92  SAKTLAMEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 151

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEE VNDAVD+ALDSEDIEEEIEEEVDKVLTAIAGETAA
Sbjct: 152 KAPEVAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEEEIEEEVDKVLTAIAGETAA 211

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKE++KQPA   E  +EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 212 QLPEAVRKERVKQPAQTAEADDEEAIAEGADDEEELEEIRARLAKVRS 259

[Close]

BLAST of Csa1G109340 vs. NCBI nr
Match: gi|590590886|ref|XP_007016862.1| (SNF7 family protein isoform 2 [Theobroma cacao])

HSP 1 Score: 396.7 bits (1018), Expect = 2.7e-107
Identity = 206/228 (90.35%), Postives = 221/228 (96.93%), Query Frame = 1


Query: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60
           MEKVMNI+KPKPNPQQQLRDWQRRLRQECRN+ERQIRDIQREE+NVQKAIR+AAKRNDMV
Sbjct: 1   MEKVMNIIKPKPNPQQQLRDWQRRLRQECRNIERQIRDIQREERNVQKAIREAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120
           SAKALAKEIVRS++TVNRL+ENKAQ+NSISMHLGESVAIA TVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKALAKEIVRSRRTVNRLYENKAQMNSISMHLGESVAIALTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEEFV+DA+D+ALDSEDIEEEIEEEVDKVLT+IAGETAA
Sbjct: 121 KAPEVAVTMQEFSKEMTKAGVIEEFVDDALDNALDSEDIEEEIEEEVDKVLTSIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPA     +EEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAQTTP-QEEEAIAEGVDDEEELEEIRARLAKVRS 227

The following BLAST results are available for this feature:

BLAST of Csa1G109340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VP241_ARATH	4.7e-104	84.28	Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana...	[more]
VP242_ARATH	1.1e-73	74.24	Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis...	[more]
CHMP3_RAT	6.7e-42	41.40	Charged multivesicular body protein 3 OS=Rattus norvegicus GN=Chmp3 PE=1 SV=3	[more]
CHMP3_MOUSE	8.8e-42	41.67	Charged multivesicular body protein 3 OS=Mus musculus GN=Chmp3 PE=1 SV=3	[more]
CHMP3_PONAB	4.3e-41	40.74	Charged multivesicular body protein 3 OS=Pongo abelii GN=CHMP3 PE=2 SV=3	[more]

BLAST of Csa1G109340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXU7_CUCSA	3.6e-119	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109340 PE=3 SV=1	[more]
F6GW93_VITVI	2.9e-108	90.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00540 PE=3 SV=...	[more]
A0A061GYA2_THECC	1.9e-107	90.35	SNF7 family protein isoform 2 OS=Theobroma cacao GN=TCM_042150 PE=3 SV=1	[more]
V7AFF3_PHAVU	3.2e-107	89.91	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G085100g PE=3 SV=1	[more]
A0A0D2RMP1_GOSRA	4.1e-107	90.35	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G145500 PE=3 SV=1	[more]

BLAST of Csa1G109340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22950.1	2.7e-105	84.28	SNF7 family protein	[more]
AT3G45000.1	6.4e-75	74.24	SNF7 family protein	[more]
AT1G03950.1	3.0e-24	28.70	vacuolar protein sorting-associated protein 2.3	[more]
AT5G44560.1	2.2e-22	27.35	SNF7 family protein	[more]
AT2G06530.1	8.2e-22	28.13	SNF7 family protein	[more]

BLAST of Csa1G109340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459120\|ref\|XP_004147294.1\|	5.2e-119	100.00	PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sat...	[more]
gi\|659072004\|ref\|XP_008463000.1\|	5.7e-118	98.68	PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis mel...	[more]
gi\|225436486\|ref\|XP_002275903.1\|	4.1e-108	90.79	PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Vitis vinif...	[more]
gi\|297734917\|emb\|CBI17151.3\|	4.1e-108	90.79	unnamed protein product [Vitis vinifera]	[more]
gi\|590590886\|ref\|XP_007016862.1\|	2.7e-107	90.35	SNF7 family protein isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005024	Snf7_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0007034	vacuolar transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU102025	cucumber EST collection version 3.0	transcribed_cluster
CU102412	cucumber EST collection version 3.0	transcribed_cluster
CU111692	cucumber EST collection version 3.0	transcribed_cluster
CU138870	cucumber EST collection version 3.0	transcribed_cluster
CU158205	cucumber EST collection version 3.0	transcribed_cluster
CU174956	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G109340.1	Csa1G109340.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU158205	CU158205	transcribed_cluster
CU102025	CU102025	transcribed_cluster
CU138870	CU138870	transcribed_cluster
CU111692	CU111692	transcribed_cluster
CU102412	CU102412	transcribed_cluster
CU174956	CU174956	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 21..188 score: 1.9
None	No IPR available	unknown	Coil	Coil	coord: 22..56 scor
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 3..228 score: 1.6E
None	No IPR available	PANTHER	PTHR10476:SF10	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 2-RELATED	coord: 3..228 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G109340	Cla005095	Watermelon (97103) v1	cuwmB010
Csa1G109340	MELO3C004945	Melon (DHL92) v3.5.1	cumeB015
Csa1G109340	ClCG03G002800	Watermelon (Charleston Gray)	cuwcgB037
Csa1G109340	Lsi03G000140	Bottle gourd (USVL1VR-Ls)	culsiB044
Csa1G109340	MELO3C004945.2	Melon (DHL92) v3.6.1	cumedB010
Csa1G109340	Cla97C03G053850	Watermelon (97103) v2	cuwmbB034
Csa1G109340	Bhi08G000204	Wax gourd	cuwgoB049
Csa1G109340	CSPI01G13390	Wild cucumber (PI 183967)	cpicuB000
Csa1G109340	CmaCh13G002410	Cucurbita maxima (Rimu)	cmacuB203
Csa1G109340	CmoCh13G002420	Cucurbita moschata (Rifu)	cmocuB188
Csa1G109340	Cp4.1LG02g12500	Cucurbita pepo (Zucchini)	cpecuB528
Csa1G109340	CsGy1G013500	Cucumber (Gy14) v2	cgybcuB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G109340	Cucumber (Chinese Long) v2	cucuB018
Csa1G109340	Cucumber (Gy14) v1	cgycuB419
Csa1G109340	Cucurbita maxima (Rimu)	cmacuB431
Csa1G109340	Cucurbita moschata (Rifu)	cmocuB421
Csa1G109340	Cucurbita pepo (Zucchini)	cpecuB516
Csa1G109340	Cucumber (Gy14) v2	cgybcuB097
Csa1G109340	Silver-seed gourd	carcuB0360
Csa1G109340	Silver-seed gourd	carcuB0472
Csa1G109340	Silver-seed gourd	carcuB1083
Csa1G109340	Wax gourd	cuwgoB016