CsGy1G013500 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGATAAAACATTTTTTGAAAACTACATAATCGTGTATTATTTTCTATATGATTGCTTTTCACGATCGGTTAAAAGAACAAGTATTCACTTTTATTATTTGTTTGAGAATGATTTGAAATGTTTTGAATATTAAGTTACATAAAATGATTTGAAGAACCCTTCACGGGACGCCTCCTTCTCACTCTCGGGAATCTCTCTCCCATAAATCTTCTCCCGTCCACCAAATCGACGTCAACTGTCACCGCCGCCGGACATCCCCTCCTCTAGACTTTGATCCTAAGCTTCTCGAGGCTACTAATTTCACTTTGATTCCATTGATCTTAAGCAAGTTCGCAATTCTTTGATCTTCAAAATTTTTGGTAGTCAAAAGGAGAGAGATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGGTAACGGATCGTATTTTCGTATCTTCCGTTTCAATCTTTTTCGTGTTTTCTTTTATGTATCTGTTCCTTGCGAGGTTAAAATTCTGATCATGCCATCCATTCTTCTTCTACGGTTAGGGATTCTTTAATTCTTCATGTGTCTTTTATTTGATTTCTCCTTCTTTGATTGATTTGGGTCAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGTATGTTAAGAACTTGAGGTTATCTCTATTTAATTTTCTTATTAGGGGTTTCATAATGAAAGACAAATTTCGATCTGGGAAATTTTCTACAAGTTAAGAATATTTAGGGGTATTGAGGTGAAAAATGGGAGAATCTGAAAAATATTAACCAAAGATGTTATATGAAAAATTATTTTCCCTAATGTTCTTTTAATTCGGGAACAAAACGAGGGGACTATTCTGTTCCCTCCCTTGTTTGTTCTTGTGTTTTTGTATAAATCTTATGCCTTGAGGGCAAAGCATGACTTGAAAGTTGGGGGTGGGGTTTGGTTGTGAGAGAATGTGCAGGTTTGCCTATAGCTATTACTACTGTTGCTAAGGCATTACGAAATAAGCCTTCCGACATTTGGAATGATGCCTTAGATCAACTTAAAAGTGGATAACCATCTTATTCATTAATGCACAACGTTTACAACTCTAGAATGAAAAAGGAGACCTTTGTTAGATAACATGCCCTAGATATGATAGTTCATTTTTTAGTTTTGCTGTAAAAAAGGAAAAAAAATTAGGTTCAGAGTAATAGAATCTCATTTTTCTCTCATCCTTCGTAAATCTTTTTTAAAACTTTAATGATAAGTATCTACCACTAATTAAGAATATATTTATGGAATGTCCTACAGCCCCTGCTCGTAATGCATACCAAGCTGTTAGGGATACTGCTGAATAAAGGCCAATGATAAAGCTCGAGTCTATATCTTCGCAAGTCTGTCTGCAGGGTTTTGGTTTTGTTGACAGGAAAACTAAATTGCATGAAATTAAAGTGCACAATAAACTATTGACTATAGTATGAATGCTTGAATTTCATGTAGTGATGTGAGAGTCGATCAAGTTCAAGTTGATAGTCTAAATGGTCTACAGTATAGGAATAGGTAATCACTTTGGGCTGAGGTTTTTTTTTTTCTTAATTTTATAAAAGCTACATCTTTCATGGACAAATATTGCAAGGCTATACACAAAAAGCCAAGCCCCCTAAAAGAGGAACCAAACTTCACTAGGCTCCTTATCCTAAACACTGTTATTCCACTCGTCCAAAAATACTCCAAATTATTATGCACCCAGCAAATCATAAAAGTTGGTCCTTATCACGCAGAAGTGGATGGGATGAACTCTCCAATCAACTATAATCATTTACATTGCTGAGTTTCTTTTTGTTCCACTGGTACCTTAGATGGCTGGGTTCAGTTTGATATTGAGGTTTCCTATATATCTGGAATGTATTTATGTGATATTATCTAAATTCTCAGTGGACTAGGGAAAATGATCTATGAATTAGTACACTGGACTAGGGAAAATGATCTATGAATTAGTACACTGGACCTAATCTCTAATTGTTTCAGCATGGGGTTATGTTCTATCTCTTGCTTAATATTGCCATTTATATGTGTTTCAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTTCATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGGTATGATGTTTTCCATATTTTAAAGCTTGAAAATTCTTCTTGGTCCCTTTGCTGTTTTATCTTCTACAACCTAACTAAATGCTTTGTGGAGTCTGAGAGATAATTTGGTGATTATGAATCCATGACAAACTCTGTAATATAGCTAAAGTTTATTGTAAACAATAGTTTGCTGAAGATATACATGCATGCATGCATATATATATGTAAAGATATATTTTTTGCTTATGTTATCAATTGAATACGATAGAAAAGTTTGAATACAGATAGAAAAGCTTGAATTGGTATGAAATTTAGAAGTACAAGGATGGAAGGCGGCGGAAGGGATTCTTACTTAGCTCAATTTACAACTACTTTTTATATCGTAGCACAACATAATATTACCATTGTTGAAAGTCTACCAATTTTGCAGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGTATCTTTTTTAAGAATATAAACAATTTCTTACTTTCTCCTTGGTCAAGGCTATGAATTTAGAGGCTTGGAGCTGACATAAGACTTGATTGAACATTATTTGTTCGGTTCTTTTTTGTGTGGGTAGAAATCTTTTTTTATCAAGTTACAATGTGTTTATCCCGGTTCCATAACTTGGTTTATCTTTTATTGTCATTGGGAGAATGAGGAAATAATTTTATCTTTTATTTATAGAAACATAGTTAACTTTGTTCAACACCAAAAGGAAAAAGCCTAAGGTTTGAGGTGGAGAGAACCTCCTCCCAAAGAGACTATAAGAGAGCCTACTAATTGTACAAAATTATGAGGAGTCTATAATTACAAAAGGATGTTTTGTGGTTGGAGCTCCAACACAACTTTGTGTACGACCCATTTGTTAAATCCTCATGCTCCTTTGTTTGTAAACATTTATCGAAAGGATACTTGCTTGTAGCCTTATTGTCAAGTTTTTGTTCTCTGTTTAACTTACCAATTGCCACTAAATTTATATGTTTTCTTTAGAAAGTGTTATAATACCATTATTAATGTAGCTAGTTTTTTATATACTGTATCTATAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGTATCTATTGCATAATTTTGAGCACCCACGTTCTAGTCCTACGATGGTTATGTACAGGAAAAGTATTGTGACATTTATTTCTTTTGCAGGAAGCAATAGCTGAGGGCGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAAATTCAATATTTCACATAAAAATGTAAAATTGGCTGTAGCTCAATTTGAGTGTCAACGGTACTTGTCCTGGCATATAATGAGAGAAAATAAGCGACATACCAAACTTTCTCTTGCTCATGTTTGTGTGATCTGAGATTATATTTATCAAATAGATAGGGAGAGGGTGGAGGTGGAGACGGAAACTAACCGTTTGATGTATATTGTATCTAATCTCTTATTTAAATGAAAATGATGCATTGTTCTATCATCACA AGATAAAACATTTTTTGAAAACTACATAATCGTGTATTATTTTCTATATGATTGCTTTTCACGATCGGTTAAAAGAACAAGTATTCACTTTTATTATTTGTTTGAGAATGATTTGAAATGTTTTGAATATTAAGTTACATAAAATGATTTGAAGAACCCTTCACGGGACGCCTCCTTCTCACTCTCGGGAATCTCTCTCCCATAAATCTTCTCCCGTCCACCAAATCGACGTCAACTGTCACCGCCGCCGGACATCCCCTCCTCTAGACTTTGATCCTAAGCTTCTCGAGGCTACTAATTTCACTTTGATTCCATTGATCTTAAGCAAGTTCGCAATTCTTTGATCTTCAAAATTTTTGGTAGTCAAAAGGAGAGAGATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTTCATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGAAGCAATAGCTGAGGGCGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAAATTCAATATTTCACATAAAAATGTAAAATTGGCTGTAGCTCAATTTGAGTGTCAACGGTACTTGTCCTGGCATATAATGAGAGAAAATAAGCGACATACCAAACTTTCTCTTGCTCATGTTTGTGTGATCTGAGATTATATTTATCAAATAGATAGGGAGAGGGTGGAGGTGGAGACGGAAACTAACCGTTTGATGTATATTGTATCTAATCTCTTATTTAAATGAAAATGATGCATTGTTCTATCATCACA ATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTTCATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGAAGCAATAGCTGAGGGCGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAA MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS
BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_004147294.1 (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sativus] >KGN64811.1 hypothetical protein Csa_1G109340 [Cucumis sativus]) HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44 Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_008463000.1 (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis melo]) HSP 1 Score: 188.0 bits (476), Expect = 3.7e-44 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_022152871.1 (vacuolar protein sorting-associated protein 24 homolog 1 [Momordica charantia]) HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39 Identity = 208/229 (90.83%), Postives = 214/229 (93.45%), Query Frame = 0
BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_022964906.1 (vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita moschata]) HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39 Identity = 207/229 (90.39%), Postives = 213/229 (93.01%), Query Frame = 0
BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_022970267.1 (vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita maxima]) HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39 Identity = 190/229 (82.97%), Postives = 196/229 (85.59%), Query Frame = 0
BLAST of CsGy1G013500 vs. TAIR10
Match: AT5G22950.1 (SNF7 family protein) HSP 1 Score: 147.9 bits (372), Expect = 7.6e-36 Identity = 202/229 (88.21%), Postives = 214/229 (93.45%), Query Frame = 0
BLAST of CsGy1G013500 vs. TAIR10
Match: AT3G45000.1 (SNF7 family protein) HSP 1 Score: 88.6 bits (218), Expect = 5.5e-18 Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0
BLAST of CsGy1G013500 vs. Swiss-Prot
Match: sp|Q9FFB3|VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS24-1 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34 Identity = 202/229 (88.21%), Postives = 214/229 (93.45%), Query Frame = 0
BLAST of CsGy1G013500 vs. Swiss-Prot
Match: sp|Q9LXH5|VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS24-2 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 9.9e-17 Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0
BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A0A0LXU7|A0A0A0LXU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109340 PE=3 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44 Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0
BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A1S3CIN5|A0A1S3CIN5_CUCME (vacuolar protein sorting-associated protein 24 homolog 1 OS=Cucumis melo OX=3656 GN=LOC103501246 PE=3 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.4e-44 Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0
BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|F6GW93|F6GW93_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00540 PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 7.5e-38 Identity = 204/228 (89.47%), Postives = 209/228 (91.67%), Query Frame = 0
BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A2P5FTM2|A0A2P5FTM2_9ROSA (Snf7 family OS=Trema orientalis OX=63057 GN=TorRG33x02_028950 PE=3 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 9.8e-38 Identity = 210/229 (91.70%), Postives = 216/229 (94.32%), Query Frame = 0
BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A2P6QGT6|A0A2P6QGT6_ROSCH (Putative Snf7 family protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0057111 PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.7e-37 Identity = 210/228 (92.11%), Postives = 215/228 (94.30%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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