CsGy1G013500 (gene) Cucumber (Gy14) v2

NameCsGy1G013500
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionVacuolar protein sorting-associated protein 24 homolog 1
LocationChr1 : 8870518 .. 8874535 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATAAAACATTTTTTGAAAACTACATAATCGTGTATTATTTTCTATATGATTGCTTTTCACGATCGGTTAAAAGAACAAGTATTCACTTTTATTATTTGTTTGAGAATGATTTGAAATGTTTTGAATATTAAGTTACATAAAATGATTTGAAGAACCCTTCACGGGACGCCTCCTTCTCACTCTCGGGAATCTCTCTCCCATAAATCTTCTCCCGTCCACCAAATCGACGTCAACTGTCACCGCCGCCGGACATCCCCTCCTCTAGACTTTGATCCTAAGCTTCTCGAGGCTACTAATTTCACTTTGATTCCATTGATCTTAAGCAAGTTCGCAATTCTTTGATCTTCAAAATTTTTGGTAGTCAAAAGGAGAGAGATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGGTAACGGATCGTATTTTCGTATCTTCCGTTTCAATCTTTTTCGTGTTTTCTTTTATGTATCTGTTCCTTGCGAGGTTAAAATTCTGATCATGCCATCCATTCTTCTTCTACGGTTAGGGATTCTTTAATTCTTCATGTGTCTTTTATTTGATTTCTCCTTCTTTGATTGATTTGGGTCAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGTATGTTAAGAACTTGAGGTTATCTCTATTTAATTTTCTTATTAGGGGTTTCATAATGAAAGACAAATTTCGATCTGGGAAATTTTCTACAAGTTAAGAATATTTAGGGGTATTGAGGTGAAAAATGGGAGAATCTGAAAAATATTAACCAAAGATGTTATATGAAAAATTATTTTCCCTAATGTTCTTTTAATTCGGGAACAAAACGAGGGGACTATTCTGTTCCCTCCCTTGTTTGTTCTTGTGTTTTTGTATAAATCTTATGCCTTGAGGGCAAAGCATGACTTGAAAGTTGGGGGTGGGGTTTGGTTGTGAGAGAATGTGCAGGTTTGCCTATAGCTATTACTACTGTTGCTAAGGCATTACGAAATAAGCCTTCCGACATTTGGAATGATGCCTTAGATCAACTTAAAAGTGGATAACCATCTTATTCATTAATGCACAACGTTTACAACTCTAGAATGAAAAAGGAGACCTTTGTTAGATAACATGCCCTAGATATGATAGTTCATTTTTTAGTTTTGCTGTAAAAAAGGAAAAAAAATTAGGTTCAGAGTAATAGAATCTCATTTTTCTCTCATCCTTCGTAAATCTTTTTTAAAACTTTAATGATAAGTATCTACCACTAATTAAGAATATATTTATGGAATGTCCTACAGCCCCTGCTCGTAATGCATACCAAGCTGTTAGGGATACTGCTGAATAAAGGCCAATGATAAAGCTCGAGTCTATATCTTCGCAAGTCTGTCTGCAGGGTTTTGGTTTTGTTGACAGGAAAACTAAATTGCATGAAATTAAAGTGCACAATAAACTATTGACTATAGTATGAATGCTTGAATTTCATGTAGTGATGTGAGAGTCGATCAAGTTCAAGTTGATAGTCTAAATGGTCTACAGTATAGGAATAGGTAATCACTTTGGGCTGAGGTTTTTTTTTTTCTTAATTTTATAAAAGCTACATCTTTCATGGACAAATATTGCAAGGCTATACACAAAAAGCCAAGCCCCCTAAAAGAGGAACCAAACTTCACTAGGCTCCTTATCCTAAACACTGTTATTCCACTCGTCCAAAAATACTCCAAATTATTATGCACCCAGCAAATCATAAAAGTTGGTCCTTATCACGCAGAAGTGGATGGGATGAACTCTCCAATCAACTATAATCATTTACATTGCTGAGTTTCTTTTTGTTCCACTGGTACCTTAGATGGCTGGGTTCAGTTTGATATTGAGGTTTCCTATATATCTGGAATGTATTTATGTGATATTATCTAAATTCTCAGTGGACTAGGGAAAATGATCTATGAATTAGTACACTGGACTAGGGAAAATGATCTATGAATTAGTACACTGGACCTAATCTCTAATTGTTTCAGCATGGGGTTATGTTCTATCTCTTGCTTAATATTGCCATTTATATGTGTTTCAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTTCATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGGTATGATGTTTTCCATATTTTAAAGCTTGAAAATTCTTCTTGGTCCCTTTGCTGTTTTATCTTCTACAACCTAACTAAATGCTTTGTGGAGTCTGAGAGATAATTTGGTGATTATGAATCCATGACAAACTCTGTAATATAGCTAAAGTTTATTGTAAACAATAGTTTGCTGAAGATATACATGCATGCATGCATATATATATGTAAAGATATATTTTTTGCTTATGTTATCAATTGAATACGATAGAAAAGTTTGAATACAGATAGAAAAGCTTGAATTGGTATGAAATTTAGAAGTACAAGGATGGAAGGCGGCGGAAGGGATTCTTACTTAGCTCAATTTACAACTACTTTTTATATCGTAGCACAACATAATATTACCATTGTTGAAAGTCTACCAATTTTGCAGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGTATCTTTTTTAAGAATATAAACAATTTCTTACTTTCTCCTTGGTCAAGGCTATGAATTTAGAGGCTTGGAGCTGACATAAGACTTGATTGAACATTATTTGTTCGGTTCTTTTTTGTGTGGGTAGAAATCTTTTTTTATCAAGTTACAATGTGTTTATCCCGGTTCCATAACTTGGTTTATCTTTTATTGTCATTGGGAGAATGAGGAAATAATTTTATCTTTTATTTATAGAAACATAGTTAACTTTGTTCAACACCAAAAGGAAAAAGCCTAAGGTTTGAGGTGGAGAGAACCTCCTCCCAAAGAGACTATAAGAGAGCCTACTAATTGTACAAAATTATGAGGAGTCTATAATTACAAAAGGATGTTTTGTGGTTGGAGCTCCAACACAACTTTGTGTACGACCCATTTGTTAAATCCTCATGCTCCTTTGTTTGTAAACATTTATCGAAAGGATACTTGCTTGTAGCCTTATTGTCAAGTTTTTGTTCTCTGTTTAACTTACCAATTGCCACTAAATTTATATGTTTTCTTTAGAAAGTGTTATAATACCATTATTAATGTAGCTAGTTTTTTATATACTGTATCTATAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGTATCTATTGCATAATTTTGAGCACCCACGTTCTAGTCCTACGATGGTTATGTACAGGAAAAGTATTGTGACATTTATTTCTTTTGCAGGAAGCAATAGCTGAGGGCGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAAATTCAATATTTCACATAAAAATGTAAAATTGGCTGTAGCTCAATTTGAGTGTCAACGGTACTTGTCCTGGCATATAATGAGAGAAAATAAGCGACATACCAAACTTTCTCTTGCTCATGTTTGTGTGATCTGAGATTATATTTATCAAATAGATAGGGAGAGGGTGGAGGTGGAGACGGAAACTAACCGTTTGATGTATATTGTATCTAATCTCTTATTTAAATGAAAATGATGCATTGTTCTATCATCACA

mRNA sequence

AGATAAAACATTTTTTGAAAACTACATAATCGTGTATTATTTTCTATATGATTGCTTTTCACGATCGGTTAAAAGAACAAGTATTCACTTTTATTATTTGTTTGAGAATGATTTGAAATGTTTTGAATATTAAGTTACATAAAATGATTTGAAGAACCCTTCACGGGACGCCTCCTTCTCACTCTCGGGAATCTCTCTCCCATAAATCTTCTCCCGTCCACCAAATCGACGTCAACTGTCACCGCCGCCGGACATCCCCTCCTCTAGACTTTGATCCTAAGCTTCTCGAGGCTACTAATTTCACTTTGATTCCATTGATCTTAAGCAAGTTCGCAATTCTTTGATCTTCAAAATTTTTGGTAGTCAAAAGGAGAGAGATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTTCATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGAAGCAATAGCTGAGGGCGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAAATTCAATATTTCACATAAAAATGTAAAATTGGCTGTAGCTCAATTTGAGTGTCAACGGTACTTGTCCTGGCATATAATGAGAGAAAATAAGCGACATACCAAACTTTCTCTTGCTCATGTTTGTGTGATCTGAGATTATATTTATCAAATAGATAGGGAGAGGGTGGAGGTGGAGACGGAAACTAACCGTTTGATGTATATTGTATCTAATCTCTTATTTAAATGAAAATGATGCATTGTTCTATCATCACA

Coding sequence (CDS)

ATGGAAAAAGTGATGAACATCTTGAAGCCCAAACCAAATCCTCAACAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGATATACAGCGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGGAATGATATGGTCTCTGCAAAGGCACTGGCTAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGCCTTCATGAAAACAAGGCACAGCTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCCATTGCGAGAACGGTGGGACATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCAAAAACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCCGGTGAGACTGCGGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAAGATGAAACAACCGGCTCATGTGCAGGAAGTCCGGGAAGAGGAAGCAATAGCTGAGGGCGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCGAAAGTTAGATCATAA

Protein sequence

MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS
BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_004147294.1 (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sativus] >KGN64811.1 hypothetical protein Csa_1G109340 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPAHVQEVREEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 228

BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_008463000.1 (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis melo])

HSP 1 Score: 188.0 bits (476), Expect = 3.7e-44
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+MNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRNDMV
Sbjct: 1   MEKMMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 228

BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_022152871.1 (vacuolar protein sorting-associated protein 24 homolog 1 [Momordica charantia])

HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39
Identity = 208/229 (90.83%), Postives = 214/229 (93.45%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+M++LKPK NPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KRNDMV
Sbjct: 1   MEKMMSMLKPKANPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKE+VRS+KTVNRLHENKAQLNSISMHLGESVAIARTV  XXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GETAA
Sbjct: 121 XXXXMAITMQEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVR-EEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKE+MKQPAHVQEVR EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERMKQPAHVQEVREEEEAIAEGVDDEEELEEIRARLAKVRS 229

BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_022964906.1 (vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39
Identity = 207/229 (90.39%), Postives = 213/229 (93.01%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+MN+LKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNDMV
Sbjct: 1   MEKMMNVLKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRS+KTVNRLHENKAQ+NSISMHLGES+AIARTV            XXXXX
Sbjct: 61  SAKALAKEIVRSRKTVNRLHENKAQVNSISMHLGESIAIARTVGHLSKSAEVMKLXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEV-REEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKE+MKQPA VQEV REEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERMKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS 229

BLAST of CsGy1G013500 vs. NCBI nr
Match: XP_022970267.1 (vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 171.8 bits (434), Expect = 2.7e-39
Identity = 190/229 (82.97%), Postives = 196/229 (85.59%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+MN+LKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNDMV
Sbjct: 1   MEKMMNVLKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQ+NSISMHLGES+AIARTV                 
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQVNSISMHLGESIAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GETAA
Sbjct: 121 KAPEMETTMREFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEV-REEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKE+MKQP+ VQEV REEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERMKQPSRVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS 229

BLAST of CsGy1G013500 vs. TAIR10
Match: AT5G22950.1 (SNF7 family protein)

HSP 1 Score: 147.9 bits (372), Expect = 7.6e-36
Identity = 202/229 (88.21%), Postives = 214/229 (93.45%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           ME+VMNI+KPKP+P+Q LRDW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIV S++TVNRL+ENKAQ+NSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAH-VQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           +LP AVRKE++K PA      REEEA+AEGVDDEEELEEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

BLAST of CsGy1G013500 vs. TAIR10
Match: AT3G45000.1 (SNF7 family protein)

HSP 1 Score: 88.6 bits (218), Expect = 5.5e-18
Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0

Query: 55  KRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXX 114
           KRND+V+AKALA+EIV S++TV RL+ENKAQ+NSISMHLGES+A A TV           
Sbjct: 26  KRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMK 85

Query: 115 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 86  LVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 145

Query: 175 AGETAAQLPEAVRKEKMKQPAHVQE-VREEEAIAEGVDDEEELEEIRARLAKVRS 229
                 +LPEAVRK+KM  PA   E +  E+AI EGVD EEELE IR RLA VRS
Sbjct: 146 XXXXXXELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIRYRLANVRS 200

BLAST of CsGy1G013500 vs. Swiss-Prot
Match: sp|Q9FFB3|VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS24-1 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-34
Identity = 202/229 (88.21%), Postives = 214/229 (93.45%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           ME+VMNI+KPKP+P+Q LRDW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIV S++TVNRL+ENKAQ+NSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAH-VQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           +LP AVRKE++K PA      REEEA+AEGVDDEEELEEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

BLAST of CsGy1G013500 vs. Swiss-Prot
Match: sp|Q9LXH5|VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS24-2 PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.9e-17
Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0

Query: 55  KRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXX 114
           KRND+V+AKALA+EIV S++TV RL+ENKAQ+NSISMHLGES+A A TV           
Sbjct: 26  KRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMK 85

Query: 115 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 86  LVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 145

Query: 175 AGETAAQLPEAVRKEKMKQPAHVQE-VREEEAIAEGVDDEEELEEIRARLAKVRS 229
                 +LPEAVRK+KM  PA   E +  E+AI EGVD EEELE IR RLA VRS
Sbjct: 146 XXXXXXELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIRYRLANVRS 200

BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A0A0LXU7|A0A0A0LXU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109340 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44
Identity = 227/228 (99.56%), Postives = 228/228 (100.00%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPAHVQEVREEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 228

BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A1S3CIN5|A0A1S3CIN5_CUCME (vacuolar protein sorting-associated protein 24 homolog 1 OS=Cucumis melo OX=3656 GN=LOC103501246 PE=3 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 2.4e-44
Identity = 225/228 (98.68%), Postives = 226/228 (99.12%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+MNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRNDMV
Sbjct: 1   MEKMMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 228

BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|F6GW93|F6GW93_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00540 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.5e-38
Identity = 204/228 (89.47%), Postives = 209/228 (91.67%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    KRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAK LA EIVRS++TVNRLHENKAQLNSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKTLAMEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXTMQEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKE++KQPA   E  +EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERVKQPAQTAEADDEEAIAEGADDEEELEEIRARLAKVRS 228

BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A2P5FTM2|A0A2P5FTM2_9ROSA (Snf7 family OS=Trema orientalis OX=63057 GN=TorRG33x02_028950 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 9.8e-38
Identity = 210/229 (91.70%), Postives = 216/229 (94.32%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRS+KTVNRLHENKAQ+NSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSRKTVNRLHENKAQMNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGET A
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAGETTA 180

Query: 181 QLPEAVRKEKMKQPAHVQEV-REEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAV+KE++KQPA   E  REEE IAEGVDDEEELEE+RARLAKVRS
Sbjct: 181 QLPEAVKKERLKQPAQPSEAGREEEPIAEGVDDEEELEELRARLAKVRS 229

BLAST of CsGy1G013500 vs. TrEMBL
Match: tr|A0A2P6QGT6|A0A2P6QGT6_ROSCH (Putative Snf7 family protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0057111 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.7e-37
Identity = 210/228 (92.11%), Postives = 215/228 (94.30%), Query Frame = 0

Query: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKVMNI+KPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNDM 
Sbjct: 1   MEKVMNIIKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNDMG 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120
           SAK+LA EIVRS+KTVNRLHENKAQLNSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKSLAVEIVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 229
           QLPEAVRKEK+KQPA  Q  +EEEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKLKQPASAQAAQEEEAIAEGADDEEELEEIRARLAKVRS 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004147294.12.1e-4499.56PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sat... [more]
XP_008463000.13.7e-4498.68PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis mel... [more]
XP_022152871.12.1e-3990.83vacuolar protein sorting-associated protein 24 homolog 1 [Momordica charantia][more]
XP_022964906.12.7e-3990.39vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita m... [more]
XP_022970267.12.7e-3982.97vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita m... [more]
Match NameE-valueIdentityDescription
AT5G22950.17.6e-3688.21SNF7 family protein[more]
AT3G45000.15.5e-1856.00SNF7 family protein[more]
Match NameE-valueIdentityDescription
sp|Q9FFB3|VP241_ARATH1.4e-3488.21Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana... [more]
sp|Q9LXH5|VP242_ARATH9.9e-1756.00Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0LXU7|A0A0A0LXU7_CUCSA1.4e-4499.56Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109340 PE=3 SV=1[more]
tr|A0A1S3CIN5|A0A1S3CIN5_CUCME2.4e-4498.68vacuolar protein sorting-associated protein 24 homolog 1 OS=Cucumis melo OX=3656... [more]
tr|F6GW93|F6GW93_VITVI7.5e-3889.47Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00540 PE=3 SV=... [more]
tr|A0A2P5FTM2|A0A2P5FTM2_9ROSA9.8e-3891.70Snf7 family OS=Trema orientalis OX=63057 GN=TorRG33x02_028950 PE=3 SV=1[more]
tr|A0A2P6QGT6|A0A2P6QGT6_ROSCH1.7e-3792.11Putative Snf7 family protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0057111... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G013500.1CsGy1G013500.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..209
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 1..228
NoneNo IPR availablePANTHERPTHR10476:SF36VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-RELATEDcoord: 1..228
IPR005024Snf7 familyPFAMPF03357Snf7coord: 21..188
e-value: 2.0E-29
score: 102.3