Cla97C03G053850 (gene) Watermelon (97103) v2

Overview
NameCla97C03G053850
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionvacuolar protein sorting-associated protein 24 homolog 1
LocationCla97Chr03 : 3052284 .. 3054911 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAAATGATGAGCATCTTGAAGCCCAAACCAAATCCGCAGCAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGGTAACGGATCGTATTTTGCTATTATCAATTTTAATCTCGTTCGTATTTTGCAATTTCAATTTCAATCTGATTTGTTCTTGTTCGATTGATTTGGGCCAGACATACAGAGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGAAATGATATGGTCTCTGCAAAGGTATGTTTAGAACTTCAGATTTTCTCTGTTTAATTTTCTGATTTAGAGGTTTCATAATGAAGAAACGAATTCTGATCTGGGGAAATTTTCCCTAATCCACTTCGGAGTGAGGGGGAGGGAGACTCTGTTAATCATCATTTTTTTTTTTTTTTTTTTTTTTTTAATTTTTTAACCAACAACTTTCATTGACAAAATTTACAAGGGCATACAAATAGCAAGCCCCAACTATACAAAATAACATCAAAATAATAATTACAAAAAGATCTTCAAGGCAAAGCCCATAAAGAAACATGATATTAACGAGGGACCAAGCCTCACTAAGCTCCTTCTCCAACCCTGTAAACACTACGTTCTTCCGTTTGCCCCAAAGATCCCACAAAATATATAACACCAAGCAAACCATAAAAATTGGGCGATGATATCATCATTTACATTGCTGAATTTCTTTTTTTCACTGCAAACTTAGGCACCTAAGATGGCTGGGTTCTGTTTGAGGCTTCCTATTTTTGTGCTACCCATTAGCATGAGGGTTCATTTGGGTCTGGACACTGGAATGTATTTGTGTGATATGATCTATATTCTCAGTGGACTAGAGGAAAAAATGGTCTATAATTCAGTACATGAGATCTAATTCAGTACACTGGAATGTTTTATTTTCTGCATGGAATTATGTCTTTCTATGTCTTGTTTAATGTTGCTCTGTACTTGTGTTTCAGGCACTGGCCAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGTCTTCATGAAAACAAGGCACAACTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGGTATGATGTTTTGCATATTCTAAAACTTGATGAAACTTTTAGGTCTCTTTGCTGTCTTATCTGCTTACAACCTAATTAAATGCTGAGTTTTTCTTACCTTGTTGAGTCCGGGGAGTTAATTTGATGATTGTGTCTATGAAAAGCTCTATAGTATAACTGAAGTTTATTGTAAACAATAGTTTGTTGAAGGTATACATAATATATATATGTATACATACATACATATATATATATGTAAAGATATATATGTTGCTTATGTTATCAATTATATACAGATAGAAAATTCACCATTGTTATTTATATTTTCTTGAGTGTTAAAGTGGGGGGGAAAATCTCTAAGAGCTTTGAATGTGGTCAAACATCTTGGATTCTGGATACATTTGTTGAAAGCCTACCAAATTTGCAGCTATTGCGAGAACGGTGGGGCATCTTTCCAAGAGCGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCGACTACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGTATCTTTTTCAATAGGAACAATTTCCAACTTTCTCTTTGGTTATGAATTTAGAGGCTTAGAGCTGACGTTGACTTGATGGAACATTATTATTAATTAGGTTCTTTTTTACATGTAGATAAGAATCTTTTTTTCATCAAGTTACAATGTGTTCATCCTGGTTTCTCATAACTTGTTTTACTTTTATTTTCATTTGGGAGGATGAGGAAATAATTCTATGATTAAACTACCTTTTTGTTTTTAGAAACATTGATTAACTTGTTTAACACCAAAAGGAAAATACGTAAGGCTTGAGGTAGAGAGAACCTCCTCCCAAAGAGACTATAAGAGAGCCTTCTAATCATACAAAATTATGAGGAGGCTATAGTTACAAAAGAATGTTTTGTGGTTGGAACACCACCACGACATTGTTTAAGAATGTATGACCCTTTGTAAAAACTTCATGCTCTTCTTCTGTTGTGAACATTTATTGAAAGGACACTTGCTTATAGTCCTATTGTCAAGTGTTTGTTCTCTGTTTAACTTGCCAAACGCTATCGAATTTATATATTTTCTTTAGAAAGTGCTCCAATACCATCATTAATGTAACTGCTTTTTATATCCTATATCTATAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCTGGTGAGACTGCTGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAGGATGAAGCAACCGGCTCATGTGCAGGAAGTCCAGGAAGAGGTATATGTTGGATAATTTTGAGTACCCACGAAATTTGATCCTGTTCTAGTTCTACCGTGAAAATGTAAAGGAATAAAATATGATGATGCTTATTTCTTTTGCAGGAAGAAGCAATAGCTGAGGGGGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCAAAAGTTAGATCATAA

mRNA sequence

ATGGAGAAAATGATGAGCATCTTGAAGCCCAAACCAAATCCGCAGCAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGACATACAGAGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGAAATGATATGGTCTCTGCAAAGGCACTGGCCAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGTCTTCATGAAAACAAGGCACAACTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCTATTGCGAGAACGGTGGGGCATCTTTCCAAGAGCGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCGACTACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCTGGTGAGACTGCTGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAGGATGAAGCAACCGGCTCATGTGCAGGAAGTCCAGGAAGAGGAAGAAGCAATAGCTGAGGGGGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCAAAAGTTAGATCATAA

Coding sequence (CDS)

ATGGAGAAAATGATGAGCATCTTGAAGCCCAAACCAAATCCGCAGCAACAGCTGAGGGATTGGCAGCGTAGGCTCCGACAAGAGTGCCGCAACGTCGAACGCCAAATTCGAGACATACAGAGAGAAGAGAAAAATGTGCAGAAAGCCATTAGGGATGCTGCCAAGAGAAATGATATGGTCTCTGCAAAGGCACTGGCCAAAGAAATTGTGAGGTCTAAAAAAACTGTGAACCGTCTTCATGAAAACAAGGCACAACTTAATTCGATATCCATGCACCTTGGCGAAAGTGTTGCTATTGCGAGAACGGTGGGGCATCTTTCCAAGAGCGCTGAAGTTATGAAGCTTGTTAATAATCTGATGAAGGCCCCAGAAATGGCGACTACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAATTTGTAAATGATGCGGTGGATTCAGCACTAGATTCTGAGGATATTGAAGAGGAGATTGAAGAGGAAGTTGACAAAGTTTTGACTGCCATTGCTGGTGAGACTGCTGCACAGCTTCCAGAAGCTGTCAGGAAGGAAAGGATGAAGCAACCGGCTCATGTGCAGGAAGTCCAGGAAGAGGAAGAAGCAATAGCTGAGGGGGTTGATGACGAGGAAGAACTAGAAGAGATAAGGGCTCGACTTGCAAAAGTTAGATCATAA

Protein sequence

MEKMMSILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETAAQLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS
Homology
[Close]
BLAST of Cla97C03G053850 vs. NCBI nr
Match: XP_022152871.1 (vacuolar protein sorting-associated protein 24 homolog 1 [Momordica charantia])

HSP 1 Score: 181.4 bits (459), Expect = 3.4e-42
Identity = 212/229 (92.58%), Postives = 216/229 (94.32%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKMMS+LKPK NPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX KRNDMV
Sbjct: 1   MEKMMSMLKPKANPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKE+VRS+KTVNRLHENKAQLNSISMHLGESVAIARTVG XXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKELVRSRKTVNRLHENKAQLNSISMHLGESVAIARTVGHXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GETAA
Sbjct: 121 XXXXMAITMQEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKERMKQPAHVQEV+EEEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERMKQPAHVQEVREEEEAIAEGVDDEEELEEIRARLAKVRS 229

[Close]
BLAST of Cla97C03G053850 vs. NCBI nr
Match: XP_008463000.1 (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 2.2e-41
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKMM+ILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRNDMV
Sbjct: 1   MEKMMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKE+MKQPAHVQEV+ EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVR-EEEAIAEGVDDEEELEEIRARLAKVRS 228

[Close]
BLAST of Cla97C03G053850 vs. NCBI nr
Match: XP_004147294.1 (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sativus] >KGN64811.1 hypothetical protein Csa_1G109340 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 8.5e-41
Identity = 222/229 (96.94%), Postives = 227/229 (99.13%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+M+ILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKE+MKQPAHVQEV+ EEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVR-EEEAIAEGIDDEEELEEIRARLAKVRS 228

[Close]
BLAST of Cla97C03G053850 vs. NCBI nr
Match: XP_022964906.1 (vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 176.0 bits (445), Expect = 1.4e-40
Identity = 208/229 (90.83%), Postives = 214/229 (93.45%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKMM++LKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNDMV
Sbjct: 1   MEKMMNVLKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRS+KTVNRLHENKAQ+NSISMHLGES+AIARTVG           XXXXX
Sbjct: 61  SAKALAKEIVRSRKTVNRLHENKAQVNSISMHLGESIAIARTVGHLSKSAEVMKLXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKERMKQPA VQEV+ EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERMKQPARVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS 229

[Close]
BLAST of Cla97C03G053850 vs. NCBI nr
Match: XP_022970267.1 (vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 1.4e-40
Identity = 191/229 (83.41%), Postives = 197/229 (86.03%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKMM++LKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RNDMV
Sbjct: 1   MEKMMNVLKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQ+NSISMHLGES+AIARTVG                
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQVNSISMHLGESIAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GETAA
Sbjct: 121 KAPEMETTMREFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKERMKQP+ VQEV+ EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERMKQPSRVQEVRREEEAIAEGVDDEEELEEIRARLAKVRS 229

[Close]
BLAST of Cla97C03G053850 vs. TrEMBL
Match: tr|A0A1S3CIN5|A0A1S3CIN5_CUCME (vacuolar protein sorting-associated protein 24 homolog 1 OS=Cucumis melo OX=3656 GN=LOC103501246 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.5e-41
Identity = 222/229 (96.94%), Postives = 225/229 (98.25%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEKMM+ILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRNDMV
Sbjct: 1   MEKMMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKE+MKQPAHVQEV+ EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVR-EEEAIAEGVDDEEELEEIRARLAKVRS 228

[Close]
BLAST of Cla97C03G053850 vs. TrEMBL
Match: tr|A0A0A0LXU7|A0A0A0LXU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109340 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 5.6e-41
Identity = 222/229 (96.94%), Postives = 227/229 (99.13%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+M+ILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTV XXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKE+MKQPAHVQEV+ EEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAHVQEVR-EEEAIAEGIDDEEELEEIRARLAKVRS 228

[Close]
BLAST of Cla97C03G053850 vs. TrEMBL
Match: tr|A0A2P5CZM1|A0A2P5CZM1_PARAD (Snf7 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109050 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 3.4e-38
Identity = 193/229 (84.28%), Postives = 199/229 (86.90%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+MSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRNDMV
Sbjct: 1   MEKVMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRS+KTVNRLHENKAQ+NSISMHLGESVAIARTVG           XXXXX
Sbjct: 61  SAKALAKEIVRSRKTVNRLHENKAQMNSISMHLGESVAIARTVGHISKSSEVMKLXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXX       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AGET A
Sbjct: 121 XXXXXAATMQEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIAGETTA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAV+KER+KQPA   E   EEE IAEGVDDEEELEE+RARLAKVRS
Sbjct: 181 QLPEAVKKERLKQPAQPSEAGREEEPIAEGVDDEEELEELRARLAKVRS 229

[Close]
BLAST of Cla97C03G053850 vs. TrEMBL
Match: tr|A0A2P5FTM2|A0A2P5FTM2_9ROSA (Snf7 family OS=Trema orientalis OX=63057 GN=TorRG33x02_028950 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 7.6e-38
Identity = 209/229 (91.27%), Postives = 216/229 (94.32%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+M+ILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  KRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIVRS+KTVNRLHENKAQ+NSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVRSRKTVNRLHENKAQMNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGET A
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAGETTA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAV+KER+KQPA   E   EEE IAEGVDDEEELEE+RARLAKVRS
Sbjct: 181 QLPEAVKKERLKQPAQPSEAGREEEPIAEGVDDEEELEELRARLAKVRS 229

[Close]
BLAST of Cla97C03G053850 vs. TrEMBL
Match: tr|F6GW93|F6GW93_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00540 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36
Identity = 204/229 (89.08%), Postives = 211/229 (92.14%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           MEK+M+ILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    KRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAAKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAK LA EIVRS++TVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX
Sbjct: 61  SAKTLAMEIVRSRRTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA
Sbjct: 121 XXXXXXXTMQEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           QLPEAVRKER+KQPA   E  ++EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKERVKQPAQTAEA-DDEEAIAEGADDEEELEEIRARLAKVRS 228

[Close]
BLAST of Cla97C03G053850 vs. Swiss-Prot
Match: sp|Q9FFB3|VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=VPS24-1 PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 6.2e-35
Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           ME++M+I+KPKP+P+Q LRDW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIV S++TVNRL+ENKAQ+NSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           +LP AVRKER+K PA       EEEA+AEGVDDEEELEEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

[Close]
BLAST of Cla97C03G053850 vs. Swiss-Prot
Match: sp|Q9LXH5|VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=VPS24-2 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0 

Query: 55  KRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXX 114
           KRND+V+AKALA+EIV S++TV RL+ENKAQ+NSISMHLGES+A A TVG          
Sbjct: 26  KRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMK 85

Query: 115 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 86  LVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 145

Query: 175 AGETAAQLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
                 +LPEAVRK++M  PA   E    E+AI EGVD EEELE IR RLA VRS
Sbjct: 146 XXXXXXELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIRYRLANVRS 200

[Close]
BLAST of Cla97C03G053850 vs. TAIR10
Match: AT5G22950.1 (SNF7 family protein)

HSP 1 Score: 149.1 bits (375), Expect = 3.4e-36
Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 0 

Query: 1   MEKMMSILKPKPNPQQQLRDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60
           ME++M+I+KPKP+P+Q LRDW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRNDMV 60

Query: 61  SAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120
           SAKALAKEIV S++TVNRL+ENKAQ+NSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX
Sbjct: 61  SAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGETAA 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   AGETAA
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAIAGETAA 180

Query: 181 QLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
           +LP AVRKER+K PA       EEEA+AEGVDDEEELEEIRARLAKVRS
Sbjct: 181 ELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

[Close]
BLAST of Cla97C03G053850 vs. TAIR10
Match: AT3G45000.1 (SNF7 family protein)

HSP 1 Score: 91.7 bits (226), Expect = 6.5e-19
Identity = 98/175 (56.00%), Postives = 110/175 (62.86%), Query Frame = 0 

Query: 55  KRNDMVSAKALAKEIVRSKKTVNRLHENKAQLNSISMHLGESVAIARTVGXXXXXXXXXX 114
           KRND+V+AKALA+EIV S++TV RL+ENKAQ+NSISMHLGES+A A TVG          
Sbjct: 26  KRNDLVTAKALAREIVSSRRTVKRLYENKAQVNSISMHLGESIATAVTVGNLSKSGEVMK 85

Query: 115 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 174
                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 86  LVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 145

Query: 175 AGETAAQLPEAVRKERMKQPAHVQEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 230
                 +LPEAVRK++M  PA   E    E+AI EGVD EEELE IR RLA VRS
Sbjct: 146 XXXXXXELPEAVRKQKMNVPAQKAETLHGEDAIVEGVDAEEELEAIRYRLANVRS 200

The following BLAST results are available for this feature:
BLAST of Cla97C03G053850 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152871.13.4e-4292.58vacuolar protein sorting-associated protein 24 homolog 1 [Momordica charantia][more]
XP_008463000.12.2e-4196.94PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis mel... [more]
XP_004147294.18.5e-4196.94PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sat... [more]
XP_022964906.11.4e-4090.83vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita m... [more]
XP_022970267.11.4e-4083.41vacuolar protein sorting-associated protein 24 homolog 1 isoform X1 [Cucurbita m... [more]
BLAST of Cla97C03G053850 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CIN5|A0A1S3CIN5_CUCME1.5e-4196.94vacuolar protein sorting-associated protein 24 homolog 1 OS=Cucumis melo OX=3656... [more]
tr|A0A0A0LXU7|A0A0A0LXU7_CUCSA5.6e-4196.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G109340 PE=3 SV=1[more]
tr|A0A2P5CZM1|A0A2P5CZM1_PARAD3.4e-3884.28Snf7 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_109050 PE=3 SV=1[more]
tr|A0A2P5FTM2|A0A2P5FTM2_9ROSA7.6e-3891.27Snf7 family OS=Trema orientalis OX=63057 GN=TorRG33x02_028950 PE=3 SV=1[more]
tr|F6GW93|F6GW93_VITVI1.4e-3689.08Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0061g00540 PE=3 SV=... [more]
BLAST of Cla97C03G053850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FFB3|VP241_ARATH6.2e-3587.77Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana... [more]
sp|Q9LXH5|VP242_ARATH1.2e-1756.00Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis... [more]
BLAST of Cla97C03G053850 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G22950.13.4e-3687.77SNF7 family protein[more]
AT3G45000.16.5e-1956.00SNF7 family protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
biological_process GO:0032509 endosome transport via multivesicular body sorting pathway
biological_process GO:0045324 late endosome to vacuole transport
biological_process GO:0015031 protein transport
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
cellular_component GO:0000815 ESCRT III complex
cellular_component GO:0005771 multivesicular body
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C03G053850.1Cla97C03G053850.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 200..229
NoneNo IPR availableCOILSCoilCoilcoord: 22..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..213
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 1..229
NoneNo IPR availablePANTHERPTHR10476:SF36VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-RELATEDcoord: 1..229
IPR005024Snf7 familyPFAMPF03357Snf7coord: 21..188
e-value: 4.1E-29
score: 101.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C03G053850Cla005095Watermelon (97103) v1wmwmbB124
Cla97C03G053850Csa1G109340Cucumber (Chinese Long) v2cuwmbB034
Cla97C03G053850MELO3C004945Melon (DHL92) v3.5.1mewmbB153
Cla97C03G053850ClCG03G002800Watermelon (Charleston Gray)wcgwmbB186
Cla97C03G053850CSPI01G13390Wild cucumber (PI 183967)cpiwmbB034
Cla97C03G053850CmaCh13G002410Cucurbita maxima (Rimu)cmawmbB225
Cla97C03G053850CmoCh13G002420Cucurbita moschata (Rifu)cmowmbB209
Cla97C03G053850Lsi03G000140Bottle gourd (USVL1VR-Ls)lsiwmbB232
Cla97C03G053850CsGy1G013500Cucumber (Gy14) v2cgybwmbB034
Cla97C03G053850MELO3C004945.2Melon (DHL92) v3.6.1medwmbB142
Cla97C03G053850CsaV3_1G013580Cucumber (Chinese Long) v3cucwmbB032
Cla97C03G053850Bhi08G000204Wax gourdwgowmbB481
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C03G053850Silver-seed gourdcarwmbB0467
Cla97C03G053850Silver-seed gourdcarwmbB1127
Cla97C03G053850Cucumber (Gy14) v1cgywmbB509
Cla97C03G053850Cucurbita maxima (Rimu)cmawmbB467
Cla97C03G053850Cucurbita moschata (Rifu)cmowmbB448