Cp4.1LG02g12500 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g12500
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Charged multivesicular body protein 3
Location	Cp4.1LG02 : 11695631 .. 11698609 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCTCTCATGGGCCGACATGTCGTCTACCTTCAGATTCTTTCATATTGGCCGATAATCGCCCGTCGACAGAAAACTTGGAATCATCAGCCCTGACTCTATCTTGACGGAATAATTCCCATTTTCTGAGGTTTTTCAATTCACTTCGATTCCATTGATCTTGAGAACGCATCGAATTCTTTGATTTCCCAAAATTTCTGTTAGTCTAACGGAGGGATGGAGAAAATGATTAGCATGTTGAAGCCCAAGCCAAATCCGCAGCAGCAGCTGCGGGAATGGCAGCGAAAGCTCCGACAAGAGTGCCGCAACGTCGAACGTCAAATTCGAGGTAATGGATCTGTTTTCGTCTTTTCGATTTCAATCTGGTTCGTGTTTTTATGTATCTTTGCATTACTGGGTTGAAATTTTGATCATCTACCTTTAGGGATTCTTTAATTCTTAATGTTCTTTGATTTGGTTTGGTTTGGTTTATTTTTGCTCGATGGGTTTGGTCCAGATATACAGAGAGAGGAGAAAAATGTTCAGAAAGCTATTAAGGAAGCTGCTAAGAGGAATGATATGGTCTCTGCAAAGGTATGTTAAAAAACTTCAGATTATCTCTGTTTAATTCTCTAATCAGGGGTTTCATCAGAAAGAAAAAAAGTTCTAATATGGGGAAATTTTCCCTAATCCACTTTGGGGTGAGAGAGAGGGAGATTCTAGTAATGGTTGCTTGATTGGAACAATCCATCGTTTGCATTTACCGTGCTGAACTTCTTTTTGTTCTGCTGAGAACTTTGCCTAGGATGGCTGGTTTCATTTTGATCTTAAGGGTTCATATTTTCTTGCTTGCCATTAGGGTTCATCTTGGATATGGACAGTAATGGGATCGTGTGATATGATTCATAATTTAGTACACTGTGTCTAATCCCTTGTTGTTTCTGCATGGTATTATACCCTTTTATCTCTTGTTGTTTAATACTGCCCTGCAATTGTTTTTCAGGCACTTGCCATAGAAATTGTGAGGTCTAAAAAGACTGTGAACCGTCTTCATGAAAATAAGGCGCAGCTTAACTCGATATCCATGCACCTTGGCGAAAGTGTTGGTATGATGCTTTGCATTTCCTAAAGCTTGAAAACTTCTTGGTTTTTTTGCTGTCTTATCTTCTCCCACAACATACTTAAATGTTGAGGTTTTCATACTTTTGAGGAGTCAGGGAGGGATGATTTGATGATCATAGCAAGCTGTATAGTCTAGCTTGAGTTTTTGATAAACAATAGTATGCTGAAATTTTTGTTTTTGTTTTTGTTTATTATTTTTTGATTGTTATAAGTTGTTGAATATGAATAGCAAAGCTTGATGTGGTGTTAAATTTAAAAGTATAGGGAGGGAAGGCGAAGGGGAAGGGCCTCTTATTTAGCACATAATTAATGGCACAACTTTTTATATCGAAGTGTAACATAGTATGATCATTGAGCAATCACCATCTTTATTGATATTTTTCTCAAGTATGTTGAAGTGCGAAATTTGTATTTCTCTAAGAGCTTTGAATGTGATCACACATCTGGGATTCTGGATACCTTTGATCGAATGCCTGCCAATTTTGCAGCCATTGCGAGAACGGTGGGGCATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAACCTGATGAAGGCGCCAGAAATGGCAACTACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGTATCTTTTCTTAAAAATAGAAACAATTTCTAACTTTCTCTTTGGTCGAGGTTATGAATTTAAAGCTGATGTACCCTTGGTCGAACATTATTATTAGTTAGCTCCTTTTTACATGTAAATCAGAATTCTTTTTAATCAGGTTACAGTTTTTTTCATCCTGGTTCTTCATAACTGGGTTGATCTTTTCTTTTCATTTGGTAAAATAAGGACAAGTTCTTACTATTATACTACTACCCTTACTTTGGATTAACACAAAAATGAAACAATCTAATGGTCTGGCCACAGAACACCTCGTCCTAAAGAAAGTATAAGAGAACCTTCCATTCATATAAATTACGAGGAGGCTATAATTACAAAAGAAATTTTGTGGTTTGACCACCACGACGATGTTGTATACTCCCTTGCTCAAATCCTTATGCTCATCTTCTATTTATGGAGATTTATTGAAAGGATGTTTCGTTATAGTCCTTCTGTCAAGTCTTTGTTCTCTGTTTAATTTCCAAACACTACTGAATTTATATGTTCTCTTTGGAAAGTACTACAATGGCCTCGATAATATAGTTGTTATTGATATCTGTAGGCTGGGGTGATCGAGGAAATCGTGAATGATGCAGTGGATTCAGCACTAGATTCTGAGGATATAGAAGAGGAGATTGAAGAGGAAGTCGACAAAGTTTTGTCAGCCCTTGCTGGCGAGACTGCTGCACAGCTTCCAGAAGCAGTCAGGAAGGAAAAGATGAAGCAACCAGCTCGTGCCGAAGTCCAGGAAGAGGTATATAATGCATAGTTTTTAGTCCCCATGAAACTTGATGATGTTCTTGTTCTTTCCATGGAAATGTGAAAAAGAAACGTCATGACATATTTATTCCTTTGCAGGAAGAAGCAATTGCTGAGGGTGTTGACGATGAGGAAGAACTAGAAGAAATAAGGGCTCGGCTTGCAAAAGTTAGATCATAAATTTGATATTTCACATAAGAATTTCAAAACAGTCATAACTCGATTCGAGCCACAACATTACTTCCCTGGTATTTTATGAGAGAGAAAATGAGCGACATATTGAACTTTCTCTTGTGCATGTATGTTTGATCAAAATTCATAAACCGAGAGTATATTTGTCAAATAGATAGGAAGAGGGACGAGATGAAGGTGGAGATGGAGATGGAGACTAACCGTTTGATGTATATTATATCTAATCTGCTCAACAGAATGCAAATGATGCATTGTTCTATCTTCTTATATCTGTATGAATGCATTATGTTTCTTTCTATA

mRNA sequence

TCCCTCTCATGGGCCGACATGTCGTCTACCTTCAGATTCTTTCATATTGGCCGATAATCGCCCGTCGACAGAAAACTTGGAATCATCAGCCCTGACTCTATCTTGACGGAATAATTCCCATTTTCTGAGGTTTTTCAATTCACTTCGATTCCATTGATCTTGAGAACGCATCGAATTCTTTGATTTCCCAAAATTTCTGTTAGTCTAACGGAGGGATGGAGAAAATGATTAGCATGTTGAAGCCCAAGCCAAATCCGCAGCAGCAGCTGCGGGAATGGCAGCGAAAGCTCCGACAAGAGTGCCGCAACGTCGAACGTCAAATTCGAGATATACAGAGAGAGGAGAAAAATGTTCAGAAAGCTATTAAGGAAGCTGCTAAGAGGAATGATATGGTCTCTGCAAAGAGCTTTGAATGTGATCACACATCTGGGATTCTGGATACCTTTGATCGAATGCCTGCCAATTTTGCAGCCATTGCGAGAACGGTGGGGCATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAACCTGATGAAGGCGCCAGAAATGGCAACTACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAAATCGTGAATGATGCAGTGGATTCAGCACTAGATTCTGAGGATATAGAAGAGGAGATTGAAGAGGAAGTCGACAAAGTTTTGTCAGCCCTTGCTGGCGAGACTGCTGCACAGCTTCCAGAAGCAGTCAGGAAGGAAAAGATGAAGCAACCAGCTCGTGCCGAAGTCCAGGAAGAGGAAGAAGCAATTGCTGAGGGTGTTGACGATGAGGAAGAACTAGAAGAAATAAGGGCTCGGCTTGCAAAAGTTAGATCATAAATTTGATATTTCACATAAGAATTTCAAAACAGTCATAACTCGATTCGAGCCACAACATTACTTCCCTGGTATTTTATGAGAGAGAAAATGAGCGACATATTGAACTTTCTCTTGTGCATGTATGTTTGATCAAAATTCATAAACCGAGAGTATATTTGTCAAATAGATAGGAAGAGGGACGAGATGAAGGTGGAGATGGAGATGGAGACTAACCGTTTGATGTATATTATATCTAATCTGCTCAACAGAATGCAAATGATGCATTGTTCTATCTTCTTATATCTGTATGAATGCATTATGTTTCTTTCTATA

Coding sequence (CDS)

ATGGAGAAAATGATTAGCATGTTGAAGCCCAAGCCAAATCCGCAGCAGCAGCTGCGGGAATGGCAGCGAAAGCTCCGACAAGAGTGCCGCAACGTCGAACGTCAAATTCGAGATATACAGAGAGAGGAGAAAAATGTTCAGAAAGCTATTAAGGAAGCTGCTAAGAGGAATGATATGGTCTCTGCAAAGAGCTTTGAATGTGATCACACATCTGGGATTCTGGATACCTTTGATCGAATGCCTGCCAATTTTGCAGCCATTGCGAGAACGGTGGGGCATCTTTCCAAGAGTGCTGAAGTTATGAAGCTTGTTAATAACCTGATGAAGGCGCCAGAAATGGCAACTACAATGCAAGAGTTTAGCAAGGAGATGACCAAGGCTGGGGTGATCGAGGAAATCGTGAATGATGCAGTGGATTCAGCACTAGATTCTGAGGATATAGAAGAGGAGATTGAAGAGGAAGTCGACAAAGTTTTGTCAGCCCTTGCTGGCGAGACTGCTGCACAGCTTCCAGAAGCAGTCAGGAAGGAAAAGATGAAGCAACCAGCTCGTGCCGAAGTCCAGGAAGAGGAAGAAGCAATTGCTGAGGGTGTTGACGATGAGGAAGAACTAGAAGAAATAAGGGCTCGGCTTGCAAAAGTTAGATCATAA

Protein sequence

MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMVSAKSFECDHTSGILDTFDRMPANFAAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAAQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS

Homology

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BLAST of Cp4.1LG02g12500 vs. Swiss-Prot
Match: VP241_ARATH (Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana GN=VPS24-1 PE=1 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-73
Identity = 165/230 (71.74%), Postives = 194/230 (84.35%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           ME++++++KPKP+P+Q LR+WQRKLRQECRN+ERQIRDIQ+EE+NVQKAIKEAAKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +  S    T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKALAKEIVSS-RRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAP+MA TMQEFSKEMTKAGVIEE VN+A+D+ALDSED+EEEI+EEVDKVL+A+AGETA
Sbjct: 121 MKAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPA-RAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           A+LP AVRKE++K PA +A    EEEA+AEGVDDEEELEEIRARLAKVRS
Sbjct: 181 AELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

[Close]

BLAST of Cp4.1LG02g12500 vs. Swiss-Prot
Match: VP242_ARATH (Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis thaliana GN=VPS24-2 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.3e-47
Identity = 125/199 (62.81%), Postives = 148/199 (74.37%), Query Frame = 1


Query: 32  VERQIRDIQREEKNVQKAIKEAAKRNDMVSAKSFECDHTSGILDTFDRMPANFA------ 91
           ++  + DI+REE+NV KAIK++ KRND+V+AK+   +  S    T  R+  N A      
Sbjct: 3   IKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSS-RRTVKRLYENKAQVNSIS 62

Query: 92  -------AIARTVGHLSKSAEVMKLVNNLMKAPEMATTMQEFSKEMTKAGVIEEIVNDAV 151
                  A A TVG+LSKS EVMKLVN+LMKAPE+A TMQ FSKEMTK GVIEE V+DAV
Sbjct: 63  MHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAV 122

Query: 152 DSALDSEDIEEEIEEEVDKVLSALAGETAAQLPEAVRKEKMKQPA-RAEVQEEEEAIAEG 211
           D+ALDSEDIEEEIEEEVDKVL+A+AGETAA+LPEAVRK+KM  PA +AE    E+AI EG
Sbjct: 123 DNALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEG 182

Query: 212 VDDEEELEEIRARLAKVRS 217
           VD EEELE IR RLA VRS
Sbjct: 183 VDAEEELEAIRYRLANVRS 200

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BLAST of Cp4.1LG02g12500 vs. Swiss-Prot
Match: CHMP3_MOUSE (Charged multivesicular body protein 3 OS=Mus musculus GN=Chmp3 PE=1 SV=3)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22
Identity = 82/216 (37.96%), Postives = 126/216 (58.33%), Query Frame = 1


Query: 14  PQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRND----MVSAKSF---- 73
           P++ + EW  K+R+E R V+RQIRDIQREE+ V++++K+AAK+      +V AK      
Sbjct: 12  PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSR 71

Query: 74  ----ECDHTSGILDTFDRMPANFAAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMQEFS 133
               +   +   +++      N  A+ R  G L KS EVMK + +L+K PE+  TM+E S
Sbjct: 72  KAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELS 131

Query: 134 KEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAAQLPEAVRKEKMK- 193
           KEM KAG+IEE++ D  +S  D E++EE  E E+D++L  +      + P  V     + 
Sbjct: 132 KEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKVTDALPEP 191

Query: 194 QPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           +PA A    EE    E  +DEE+LE +++RLA +RS
Sbjct: 192 EPAGAMAASEE---GEEEEDEEDLEAMQSRLATLRS 224

[Close]

BLAST of Cp4.1LG02g12500 vs. Swiss-Prot
Match: CHMP3_RAT (Charged multivesicular body protein 3 OS=Rattus norvegicus GN=Chmp3 PE=1 SV=3)

HSP 1 Score: 107.1 bits (266), Expect = 2.5e-22
Identity = 81/215 (37.67%), Postives = 125/215 (58.14%), Query Frame = 1


Query: 14  PQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRND----MVSAKSF---- 73
           P++ + EW  K+R+E R V+RQIRDIQREE+ V++++K+AAK+      +V AK      
Sbjct: 12  PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKEVCVVLAKEMIRSR 71

Query: 74  ----ECDHTSGILDTFDRMPANFAAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMQEFS 133
               +   +   +++      N  A+ R  G L KS EVMK + +L+K PE+  TM+E S
Sbjct: 72  KAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELS 131

Query: 134 KEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAAQLPEAVRKEKMKQ 193
           KEM KAG+IEE++ D  +S  D E++EE  E E+D++L  +      + P  V  + + +
Sbjct: 132 KEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDRILFEITAGALGKAPSKV-TDALPE 191

Query: 194 PARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           P  A      E   E  DDEE+LE +++RLA +RS
Sbjct: 192 PEPAGAMAASEGDEE--DDEEDLEAMQSRLATLRS 223

[Close]

BLAST of Cp4.1LG02g12500 vs. Swiss-Prot
Match: CHMP3_HUMAN (Charged multivesicular body protein 3 OS=Homo sapiens GN=CHMP3 PE=1 SV=3)

HSP 1 Score: 105.1 bits (261), Expect = 9.5e-22
Identity = 80/217 (36.87%), Postives = 125/217 (57.60%), Query Frame = 1


Query: 14  PQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRND----MVSAKSF---- 73
           P++ + EW  K+R+E R V+RQIRDIQREE+ V++++K+AAK+      +V AK      
Sbjct: 12  PKELVNEWSLKIRKEMRVVDRQIRDIQREEEKVKRSVKDAAKKGQKDVCIVLAKEMIRSR 71

Query: 74  ----ECDHTSGILDTFDRMPANFAAIARTVGHLSKSAEVMKLVNNLMKAPEMATTMQEFS 133
               +   +   +++      N  A+ R  G L KS EVMK + +L+K PE+  TM+E S
Sbjct: 72  KAVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRELS 131

Query: 134 KEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAAQLPEAVRK--EKM 193
           KEM KAG+IEE++ D  +S  D E++EEE E E+D++L  +      + P  V     + 
Sbjct: 132 KEMMKAGIIEEMLEDTFESMDDQEEMEEEAEMEIDRILFEITAGALGKAPSKVTDALPEP 191

Query: 194 KQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           + P      E+EE      ++EE LE +++RLA +RS
Sbjct: 192 EPPGAMAASEDEE------EEEEALEAMQSRLATLRS 222

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BLAST of Cp4.1LG02g12500 vs. TrEMBL
Match: A0A0A0LXU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109340 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-78
Identity = 179/229 (78.17%), Postives = 195/229 (85.15%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK++++LKPKPNPQQQLR+WQR+LRQECRNVERQIRDIQREEKNVQKAI++AAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +       T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKALAKEIVRS-KKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPEMA TMQEFSKEMTKAGVIEE VNDAVDSALDSEDIEEEIEEEVDKVL+A+AGETA
Sbjct: 121 MKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVRKEKMKQPA  +   EEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 AQLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 228

[Close]

BLAST of Cp4.1LG02g12500 vs. TrEMBL
Match: F6GW93_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00540 PE=3 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 5.5e-77
Identity = 175/229 (76.42%), Postives = 195/229 (85.15%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK++++LKPKPNPQQQLR+WQRKLRQECRN+ERQIRDIQREEK VQKAI+EAAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMV 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +       T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKTLAMEIVRS-RRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPE+A TMQEFSKEMTKAGVIEEIVNDAVD+ALDSEDIEEEIEEEVDKVL+A+AGETA
Sbjct: 121 MKAPEVAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEEEIEEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVRKE++KQPA+    ++EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 AQLPEAVRKERVKQPAQTAEADDEEAIAEGADDEEELEEIRARLAKVRS 228

[Close]

BLAST of Cp4.1LG02g12500 vs. TrEMBL
Match: A0A0D2RMP1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G145500 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 9.4e-77
Identity = 174/228 (76.32%), Postives = 191/228 (83.77%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK+++M+KPKPNPQQ LR+WQR+LRQECRN+ERQIRDIQREEKNVQKAIK+AAKRNDMV
Sbjct: 1   MEKVMNMIKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMV 60

Query: 61  SAKSFECD------------HTSGILDTFDRMPANFAAIARTVGHLSKSAEVMKLVNNLM 120
           SAKS   +                 L++         AIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKSLAMEIVRSRRTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEE VNDA+D+ALDSEDIEEE EEEVDKVL+A+AGETAA
Sbjct: 121 KAPEVAVTMQEFSKEMTKAGVIEEFVNDALDNALDSEDIEEETEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           QLPEAVRKEKMKQPA+   Q EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAQPAAQ-EEEAIAEGVDDEEELEEIRARLAKVRS 227

[Close]

BLAST of Cp4.1LG02g12500 vs. TrEMBL
Match: M5WCL6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010967mg PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.7e-76
Identity = 172/229 (75.11%), Postives = 196/229 (85.59%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEKM++M+KPKPNPQQQLR+WQRKLRQECRN+ERQIRDIQREEK+VQKAIK+AAKRNDM 
Sbjct: 1   MEKMMNMIKPKPNPQQQLRDWQRKLRQECRNIERQIRDIQREEKSVQKAIKDAAKRNDMG 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAKS   +       T +R+  N A             AIARTVGHLSKS+EVMKLVNNL
Sbjct: 61  SAKSLAKEIVRS-RRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSSEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPE+A TMQEFSKEMTKAGVIEE+VND++D+ALDSEDIE+EIEEEVDKVL+++AGETA
Sbjct: 121 MKAPEVAVTMQEFSKEMTKAGVIEEMVNDSLDTALDSEDIEDEIEEEVDKVLTSIAGETA 180

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVRKE++KQPA A+  +EEEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 AQLPEAVRKERLKQPATAQAAQEEEAIAEGADDEEELEEIRARLAKVRS 228

[Close]

BLAST of Cp4.1LG02g12500 vs. TrEMBL
Match: V7AFF3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G085100g PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 5.2e-75
Identity = 172/229 (75.11%), Postives = 194/229 (84.72%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK++++LKPKPNPQQ LR+WQR+LRQECRN+ERQIRDIQREEKNVQKAI+EAAKRNDM 
Sbjct: 1   MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMG 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +       T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKALAKELVRS-RKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPEMA TMQEFSKEMTKAGVIEE+VNDAVDSALDSEDIE+EIEEEVDKVL+A+AGETA
Sbjct: 121 MKAPEMAVTMQEFSKEMTKAGVIEEMVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVR+E++KQP ++    EEEAIAEGVDDEEE+EEIRARLAKVRS
Sbjct: 181 AQLPEAVRRERVKQPGQSVGASEEEAIAEGVDDEEEMEEIRARLAKVRS 228

[Close]

BLAST of Cp4.1LG02g12500 vs. TAIR10
Match: AT5G22950.1 (AT5G22950.1 SNF7 family protein)

HSP 1 Score: 277.7 bits (709), Expect = 6.0e-75
Identity = 165/230 (71.74%), Postives = 194/230 (84.35%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           ME++++++KPKP+P+Q LR+WQRKLRQECRN+ERQIRDIQ+EE+NVQKAIKEAAKRNDMV
Sbjct: 1   MERVMNIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMV 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +  S    T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKALAKEIVSS-RRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAP+MA TMQEFSKEMTKAGVIEE VN+A+D+ALDSED+EEEI+EEVDKVL+A+AGETA
Sbjct: 121 MKAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPA-RAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           A+LP AVRKE++K PA +A    EEEA+AEGVDDEEELEEIRARLAKVRS
Sbjct: 181 AELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIRARLAKVRS 229

[Close]

BLAST of Cp4.1LG02g12500 vs. TAIR10
Match: AT3G45000.1 (AT3G45000.1 SNF7 family protein)

HSP 1 Score: 191.0 bits (484), Expect = 7.4e-49
Identity = 125/199 (62.81%), Postives = 148/199 (74.37%), Query Frame = 1


Query: 32  VERQIRDIQREEKNVQKAIKEAAKRNDMVSAKSFECDHTSGILDTFDRMPANFA------ 91
           ++  + DI+REE+NV KAIK++ KRND+V+AK+   +  S    T  R+  N A      
Sbjct: 3   IKSLLSDIEREERNVHKAIKDSVKRNDLVTAKALAREIVSS-RRTVKRLYENKAQVNSIS 62

Query: 92  -------AIARTVGHLSKSAEVMKLVNNLMKAPEMATTMQEFSKEMTKAGVIEEIVNDAV 151
                  A A TVG+LSKS EVMKLVN+LMKAPE+A TMQ FSKEMTK GVIEE V+DAV
Sbjct: 63  MHLGESIATAVTVGNLSKSGEVMKLVNSLMKAPEIAVTMQAFSKEMTKTGVIEEFVSDAV 122

Query: 152 DSALDSEDIEEEIEEEVDKVLSALAGETAAQLPEAVRKEKMKQPA-RAEVQEEEEAIAEG 211
           D+ALDSEDIEEEIEEEVDKVL+A+AGETAA+LPEAVRK+KM  PA +AE    E+AI EG
Sbjct: 123 DNALDSEDIEEEIEEEVDKVLTAIAGETAAELPEAVRKQKMNVPAQKAETLHGEDAIVEG 182

Query: 212 VDDEEELEEIRARLAKVRS 217
           VD EEELE IR RLA VRS
Sbjct: 183 VDAEEELEAIRYRLANVRS 200

[Close]

BLAST of Cp4.1LG02g12500 vs. TAIR10
Match: AT2G06530.1 (AT2G06530.1 SNF7 family protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-07
Identity = 61/225 (27.11%), Postives = 110/225 (48.89%), Query Frame = 1


Query: 4   MISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMVSAK 63
           M S+   +  P + LRE +R L +  R +ER+ + +Q +EK +   IK+ AK+  M + K
Sbjct: 2   MNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAVK 61

Query: 64  SFECD--HTSGILDTFDRMPANFAAIARTVGHLSKS---AEVMKLV-------NNLMKAP 123
               D   T   ++ F ++ +    ++  +  L  +    E MK V       N  M  P
Sbjct: 62  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 121

Query: 124 EMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAAQLP 183
            +   MQEF ++  K  ++ E++ DA+D AL+ ++ EEE E+ V +VL  +  +   +L 
Sbjct: 122 SLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELV 181

Query: 184 EAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELE-EIRARLAKVR 216
            A         A+ +V + E   A G +D   ++ +++ARL  +R
Sbjct: 182 NAPSGAVAVPAAKNKVVQAE---ATGAEDSGGIDSDLQARLDNLR 223

[Close]

BLAST of Cp4.1LG02g12500 vs. TAIR10
Match: AT1G03950.1 (AT1G03950.1 vacuolar protein sorting-associated protein 2.3)

HSP 1 Score: 51.2 bits (121), Expect = 9.2e-07
Identity = 57/227 (25.11%), Postives = 107/227 (47.14%), Query Frame = 1


Query: 5   ISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMVSAKS 64
           +++   KPNP++ LRE +R++ Q  R +E++I  +Q EEK +   IK  AK  +  + K 
Sbjct: 1   MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKI 60

Query: 65  FECD----------------HTSGILDTFDRMPANFAAIARTVGHLSKSAEVMKLVNNLM 124
                                  GI      M A+ +  A   G    + + M  ++  M
Sbjct: 61  LARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQG----ATKAMAAMSKNM 120

Query: 125 KAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAA 184
              + A  M+EF K+  +  +  E+++D++D ALD+++ E+E E+  ++VL  +  + A+
Sbjct: 121 DPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIAS 180

Query: 185 QLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVR 216
           QL  A +        +   ++ E+  + G+D      E+  RLA +R
Sbjct: 181 QLSSAPK-------GKIGGKKAEDVGSSGID------ELEKRLAALR 210

[Close]

BLAST of Cp4.1LG02g12500 vs. NCBI nr
Match: gi|449459120|ref|XP_004147294.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sativus])

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-78
Identity = 179/229 (78.17%), Postives = 195/229 (85.15%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK++++LKPKPNPQQQLR+WQR+LRQECRNVERQIRDIQREEKNVQKAI++AAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVQKAIRDAAKRNDMV 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +       T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKALAKEIVRS-KKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPEMA TMQEFSKEMTKAGVIEE VNDAVDSALDSEDIEEEIEEEVDKVL+A+AGETA
Sbjct: 121 MKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVRKEKMKQPA  +   EEEAIAEG+DDEEELEEIRARLAKVRS
Sbjct: 181 AQLPEAVRKEKMKQPAHVQEVREEEAIAEGIDDEEELEEIRARLAKVRS 228

[Close]

BLAST of Cp4.1LG02g12500 vs. NCBI nr
Match: gi|659072004|ref|XP_008463000.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis melo])

HSP 1 Score: 300.8 bits (769), Expect = 1.9e-78
Identity = 180/229 (78.60%), Postives = 194/229 (84.72%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEKM+++LKPKPNPQQQLR+WQR+LRQECRNVERQIRDIQREEKNV KAI++AAKRNDMV
Sbjct: 1   MEKMMNILKPKPNPQQQLRDWQRRLRQECRNVERQIRDIQREEKNVHKAIRDAAKRNDMV 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +       T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKALAKEIVRS-KKTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPEMA TMQEFSKEMTKAGVIEE VNDAVDSALDSEDIEEEIEEEVDKVL+A+AGETA
Sbjct: 121 MKAPEMAKTMQEFSKEMTKAGVIEEFVNDAVDSALDSEDIEEEIEEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVRKEKMKQPA  +   EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 AQLPEAVRKEKMKQPAHVQEVREEEAIAEGVDDEEELEEIRARLAKVRS 228

[Close]

BLAST of Cp4.1LG02g12500 vs. NCBI nr
Match: gi|297734917|emb|CBI17151.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 295.4 bits (755), Expect = 7.9e-77
Identity = 175/229 (76.42%), Postives = 195/229 (85.15%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK++++LKPKPNPQQQLR+WQRKLRQECRN+ERQIRDIQREEK VQKAI+EAAKRNDMV
Sbjct: 32  MEKVMNILKPKPNPQQQLRDWQRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMV 91

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +       T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 92  SAKTLAMEIVRS-RRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 151

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPE+A TMQEFSKEMTKAGVIEEIVNDAVD+ALDSEDIEEEIEEEVDKVL+A+AGETA
Sbjct: 152 MKAPEVAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEEEIEEEVDKVLTAIAGETA 211

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVRKE++KQPA+    ++EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 212 AQLPEAVRKERVKQPAQTAEADDEEAIAEGADDEEELEEIRARLAKVRS 259

[Close]

BLAST of Cp4.1LG02g12500 vs. NCBI nr
Match: gi|225436486|ref|XP_002275903.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Vitis vinifera])

HSP 1 Score: 295.4 bits (755), Expect = 7.9e-77
Identity = 175/229 (76.42%), Postives = 195/229 (85.15%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK++++LKPKPNPQQQLR+WQRKLRQECRN+ERQIRDIQREEK VQKAI+EAAKRNDMV
Sbjct: 1   MEKVMNILKPKPNPQQQLRDWQRKLRQECRNIERQIRDIQREEKGVQKAIREAAKRNDMV 60

Query: 61  SAKSFECDHTSGILDTFDRMPANFA-------------AIARTVGHLSKSAEVMKLVNNL 120
           SAK+   +       T +R+  N A             AIARTVGHLSKSAEVMKLVNNL
Sbjct: 61  SAKTLAMEIVRS-RRTVNRLHENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNL 120

Query: 121 MKAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETA 180
           MKAPE+A TMQEFSKEMTKAGVIEEIVNDAVD+ALDSEDIEEEIEEEVDKVL+A+AGETA
Sbjct: 121 MKAPEVAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEEEIEEEVDKVLTAIAGETA 180

Query: 181 AQLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           AQLPEAVRKE++KQPA+    ++EEAIAEG DDEEELEEIRARLAKVRS
Sbjct: 181 AQLPEAVRKERVKQPAQTAEADDEEAIAEGADDEEELEEIRARLAKVRS 228

[Close]

BLAST of Cp4.1LG02g12500 vs. NCBI nr
Match: gi|823143608|ref|XP_012471612.1| (PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Gossypium raimondii])

HSP 1 Score: 294.7 bits (753), Expect = 1.3e-76
Identity = 174/228 (76.32%), Postives = 191/228 (83.77%), Query Frame = 1


Query: 1   MEKMISMLKPKPNPQQQLREWQRKLRQECRNVERQIRDIQREEKNVQKAIKEAAKRNDMV 60
           MEK+++M+KPKPNPQQ LR+WQR+LRQECRN+ERQIRDIQREEKNVQKAIK+AAKRNDMV
Sbjct: 1   MEKVMNMIKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIKDAAKRNDMV 60

Query: 61  SAKSFECD------------HTSGILDTFDRMPANFAAIARTVGHLSKSAEVMKLVNNLM 120
           SAKS   +                 L++         AIARTVGHLSKSAEVMKLVNNLM
Sbjct: 61  SAKSLAMEIVRSRRTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLM 120

Query: 121 KAPEMATTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEEEIEEEVDKVLSALAGETAA 180
           KAPE+A TMQEFSKEMTKAGVIEE VNDA+D+ALDSEDIEEE EEEVDKVL+A+AGETAA
Sbjct: 121 KAPEVAVTMQEFSKEMTKAGVIEEFVNDALDNALDSEDIEEETEEEVDKVLTAIAGETAA 180

Query: 181 QLPEAVRKEKMKQPARAEVQEEEEAIAEGVDDEEELEEIRARLAKVRS 217
           QLPEAVRKEKMKQPA+   Q EEEAIAEGVDDEEELEEIRARLAKVRS
Sbjct: 181 QLPEAVRKEKMKQPAQPAAQ-EEEAIAEGVDDEEELEEIRARLAKVRS 227

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g12500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VP241_ARATH	1.1e-73	71.74	Vacuolar protein sorting-associated protein 24 homolog 1 OS=Arabidopsis thaliana...	[more]
VP242_ARATH	1.3e-47	62.81	Putative vacuolar protein sorting-associated protein 24 homolog 2 OS=Arabidopsis...	[more]
CHMP3_MOUSE	1.9e-22	37.96	Charged multivesicular body protein 3 OS=Mus musculus GN=Chmp3 PE=1 SV=3	[more]
CHMP3_RAT	2.5e-22	37.67	Charged multivesicular body protein 3 OS=Rattus norvegicus GN=Chmp3 PE=1 SV=3	[more]
CHMP3_HUMAN	9.5e-22	36.87	Charged multivesicular body protein 3 OS=Homo sapiens GN=CHMP3 PE=1 SV=3	[more]

BLAST of Cp4.1LG02g12500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXU7_CUCSA	1.3e-78	78.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G109340 PE=3 SV=1	[more]
F6GW93_VITVI	5.5e-77	76.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0061g00540 PE=3 SV=...	[more]
A0A0D2RMP1_GOSRA	9.4e-77	76.32	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G145500 PE=3 SV=1	[more]
M5WCL6_PRUPE	2.7e-76	75.11	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010967mg PE=3 SV=1	[more]
V7AFF3_PHAVU	5.2e-75	75.11	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G085100g PE=3 SV=1	[more]

BLAST of Cp4.1LG02g12500 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22950.1	6.0e-75	71.74	SNF7 family protein	[more]
AT3G45000.1	7.4e-49	62.81	SNF7 family protein	[more]
AT2G06530.1	3.1e-07	27.11	SNF7 family protein	[more]
AT1G03950.1	9.2e-07	25.11	vacuolar protein sorting-associated protein 2.3	[more]

BLAST of Cp4.1LG02g12500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449459120\|ref\|XP_004147294.1\|	1.9e-78	78.17	PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis sat...	[more]
gi\|659072004\|ref\|XP_008463000.1\|	1.9e-78	78.60	PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Cucumis mel...	[more]
gi\|297734917\|emb\|CBI17151.3\|	7.9e-77	76.42	unnamed protein product [Vitis vinifera]	[more]
gi\|225436486\|ref\|XP_002275903.1\|	7.9e-77	76.42	PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Vitis vinif...	[more]
gi\|823143608\|ref\|XP_012471612.1\|	1.3e-76	76.32	PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1 [Gossypium r...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007034	vacuolar transport

Vocabulary: **INTERPRO**
Term	Definition
IPR005024	Snf7_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007034	vacuolar transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g12500.1	Cp4.1LG02g12500.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005024	Snf7 family	PFAM	PF03357	Snf7	coord: 88..176 score: 1.3
None	No IPR available	unknown	Coil	Coil	coord: 187..207 score: -coord: 18..56 scor
None	No IPR available	GENE3D	G3DSA:1.10.1660.10		coord: 3..58 score: 6.
None	No IPR available	PANTHER	PTHR10476	CHARGED MULTIVESICULAR BODY PROTEIN	coord: 3..216 score: 1.8E
None	No IPR available	PANTHER	PTHR10476:SF10	VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 2-RELATED	coord: 3..216 score: 1.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG02g12500	CmaCh13G002410	Cucurbita maxima (Rimu)	cmacpeB238
Cp4.1LG02g12500	CmoCh13G002420	Cucurbita moschata (Rifu)	cmocpeB205
Cp4.1LG02g12500	Cla005095	Watermelon (97103) v1	cpewmB548
Cp4.1LG02g12500	Csa1G109340	Cucumber (Chinese Long) v2	cpecuB528
Cp4.1LG02g12500	MELO3C004945	Melon (DHL92) v3.5.1	cpemeB490
Cp4.1LG02g12500	ClCG03G002800	Watermelon (Charleston Gray)	cpewcgB500
Cp4.1LG02g12500	CSPI01G13390	Wild cucumber (PI 183967)	cpecpiB530
Cp4.1LG02g12500	Lsi03G000140	Bottle gourd (USVL1VR-Ls)	cpelsiB453
Cp4.1LG02g12500	MELO3C004945.2	Melon (DHL92) v3.6.1	cpemedB583
Cp4.1LG02g12500	CsaV3_1G013580	Cucumber (Chinese Long) v3	cpecucB0657
Cp4.1LG02g12500	Bhi08G000204	Wax gourd	cpewgoB0707
Cp4.1LG02g12500	CsGy1G013500	Cucumber (Gy14) v2	cgybcpeB090

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG02g12500	Cucurbita pepo (Zucchini)	cpecpeB432
Cp4.1LG02g12500	Cucumber (Gy14) v1	cgycpeB0774
Cp4.1LG02g12500	Cucurbita maxima (Rimu)	cmacpeB491
Cp4.1LG02g12500	Cucurbita moschata (Rifu)	cmocpeB449
Cp4.1LG02g12500	Cucumber (Gy14) v2	cgybcpeB386
Cp4.1LG02g12500	Silver-seed gourd	carcpeB0622
Cp4.1LG02g12500	Silver-seed gourd	carcpeB1489
Cp4.1LG02g12500	Wax gourd	cpewgoB0695