Csa1G075010 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G075010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 7712842 .. 7713240 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATCCACAGGAAGAAGCCTCATATGAGTAGCACCACAAGCACTTGGCTCAACTCTCTTTCCTTTTCTGGCTACTTGAATTCCAAAGACCGAGACGATCCTAGTTTGGGTTCGATTGAAACACACGATAGGAAGATCAAAGTAGTTGACCATGGATTCGAGTTCAGTCCAACGTGTGGAGGTTCAAGTGTGAGCGATTATGGAGAGAGATCATCGGCATACATTGTAAGAAACAACAGTATAAAAAGAGGAAGCAAAAAGATATGGGAGGAAAAGGATGAATCAAGGTGGTCAGGGTGGAGGATTTTCTGGTTGTTTGTTTTGCCGTGTAGGGAGTGCCGAGCTAGGAAGCCCAGTGTGGTTCAACCACGACCCATTCAAGTGCCTTCCCCGTGA

mRNA sequence

ATGAGAATCCACAGGAAGAAGCCTCATATGAGTAGCACCACAAGCACTTGGCTCAACTCTCTTTCCTTTTCTGGCTACTTGAATTCCAAAGACCGAGACGATCCTAGTTTGGGTTCGATTGAAACACACGATAGGAAGATCAAAGTAGTTGACCATGGATTCGAGTTCAGTCCAACGTGTGGAGGTTCAAGTGTGAGCGATTATGGAGAGAGATCATCGGCATACATTGTAAGAAACAACAGTATAAAAAGAGGAAGCAAAAAGATATGGGAGGAAAAGGATGAATCAAGGTGGTCAGGGTGGAGGATTTTCTGGTTGTTTGTTTTGCCGTGTAGGGAGTGCCGAGCTAGGAAGCCCAGTGTGGTTCAACCACGACCCATTCAAGTGCCTTCCCCGTGA

Coding sequence (CDS)

ATGAGAATCCACAGGAAGAAGCCTCATATGAGTAGCACCACAAGCACTTGGCTCAACTCTCTTTCCTTTTCTGGCTACTTGAATTCCAAAGACCGAGACGATCCTAGTTTGGGTTCGATTGAAACACACGATAGGAAGATCAAAGTAGTTGACCATGGATTCGAGTTCAGTCCAACGTGTGGAGGTTCAAGTGTGAGCGATTATGGAGAGAGATCATCGGCATACATTGTAAGAAACAACAGTATAAAAAGAGGAAGCAAAAAGATATGGGAGGAAAAGGATGAATCAAGGTGGTCAGGGTGGAGGATTTTCTGGTTGTTTGTTTTGCCGTGTAGGGAGTGCCGAGCTAGGAAGCCCAGTGTGGTTCAACCACGACCCATTCAAGTGCCTTCCCCGTGA

Protein sequence

MRIHRKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPTCGGSSVSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRARKPSVVQPRPIQVPSP*
Homology
[Close]
BLAST of Csa1G075010 vs. TrEMBL
Match: A0A0A0LXF9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075010 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 8.7e-73
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 

Query: 1   MRIHRKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPTC 60
           MRIHRKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPTC
Sbjct: 1   MRIHRKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPTC 60

Query: 61  GGSSVSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRARKPS 120
           GGSSVSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRARKPS
Sbjct: 61  GGSSVSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRARKPS 120

Query: 121 VVQPRPIQVPSP 133
           VVQPRPIQVPSP
Sbjct: 121 VVQPRPIQVPSP 132

[Close]
BLAST of Csa1G075010 vs. NCBI nr
Match: gi|700209600|gb|KGN64696.1| (hypothetical protein Csa_1G075010 [Cucumis sativus])

HSP 1 Score: 280.8 bits (717), Expect = 1.2e-72
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1 

Query: 1   MRIHRKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPTC 60
           MRIHRKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPTC
Sbjct: 1   MRIHRKKPHMSSTTSTWLNSLSFSGYLNSKDRDDPSLGSIETHDRKIKVVDHGFEFSPTC 60

Query: 61  GGSSVSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRARKPS 120
           GGSSVSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRARKPS
Sbjct: 61  GGSSVSDYGERSSAYIVRNNSIKRGSKKIWEEKDESRWSGWRIFWLFVLPCRECRARKPS 120

Query: 121 VVQPRPIQVPSP 133
           VVQPRPIQVPSP
Sbjct: 121 VVQPRPIQVPSP 132

The following BLAST results are available for this feature:
BLAST of Csa1G075010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXF9_CUCSA8.7e-73100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G075010 PE=4 SV=1[more]
BLAST of Csa1G075010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209600|gb|KGN64696.1|1.2e-72100.00hypothetical protein Csa_1G075010 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G075010.1Csa1G075010.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G075010MELO3C002621Melon (DHL92) v3.5.1cumeB027
Csa1G075010ClCG03G008080Watermelon (Charleston Gray)cuwcgB048
Csa1G075010Lsi02G007720Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G075010MELO3C002621.2Melon (DHL92) v3.6.1cumedB022
Csa1G075010Cla97C03G059370Watermelon (97103) v2cuwmbB044
Csa1G075010Bhi08G001869Wax gourdcuwgoB052
Csa1G075010CSPI01G12280Wild cucumber (PI 183967)cpicuB000
Csa1G075010CsGy1G012310Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G075010Watermelon (97103) v2cuwmbB000
Csa1G075010Watermelon (97103) v2cuwmbB023
Csa1G075010Wax gourdcuwgoB023
Csa1G075010Wax gourdcuwgoB073
Csa1G075010Cucumber (Chinese Long) v2cucuB026
Csa1G075010Cucumber (Chinese Long) v2cucuB035
Csa1G075010Cucumber (Chinese Long) v2cucuB045
Csa1G075010Cucumber (Gy14) v1cgycuB015
Csa1G075010Cucumber (Gy14) v1cgycuB161
Csa1G075010Cucumber (Gy14) v1cgycuB170
Csa1G075010Cucurbita maxima (Rimu)cmacuB010
Csa1G075010Cucurbita maxima (Rimu)cmacuB218
Csa1G075010Cucurbita maxima (Rimu)cmacuB391
Csa1G075010Cucurbita maxima (Rimu)cmacuB648
Csa1G075010Cucurbita maxima (Rimu)cmacuB848
Csa1G075010Cucurbita moschata (Rifu)cmocuB000
Csa1G075010Cucurbita moschata (Rifu)cmocuB203
Csa1G075010Cucurbita moschata (Rifu)cmocuB380
Csa1G075010Cucurbita moschata (Rifu)cmocuB419
Csa1G075010Cucurbita moschata (Rifu)cmocuB636
Csa1G075010Cucurbita moschata (Rifu)cmocuB836
Csa1G075010Melon (DHL92) v3.5.1cumeB083
Csa1G075010Watermelon (Charleston Gray)cuwcgB009
Csa1G075010Watermelon (Charleston Gray)cuwcgB012
Csa1G075010Watermelon (97103) v1cuwmB023
Csa1G075010Watermelon (97103) v1cuwmB043
Csa1G075010Watermelon (97103) v1cuwmB075
Csa1G075010Cucurbita pepo (Zucchini)cpecuB029
Csa1G075010Cucurbita pepo (Zucchini)cpecuB058
Csa1G075010Cucurbita pepo (Zucchini)cpecuB474
Csa1G075010Cucurbita pepo (Zucchini)cpecuB506
Csa1G075010Cucurbita pepo (Zucchini)cpecuB770
Csa1G075010Bottle gourd (USVL1VR-Ls)culsiB019
Csa1G075010Cucumber (Gy14) v2cgybcuB158
Csa1G075010Cucumber (Gy14) v2cgybcuB239
Csa1G075010Melon (DHL92) v3.6.1cumedB077
Csa1G075010Silver-seed gourdcarcuB0163
Csa1G075010Silver-seed gourdcarcuB0186
Csa1G075010Silver-seed gourdcarcuB0575
Csa1G075010Silver-seed gourdcarcuB0661
Csa1G075010Silver-seed gourdcarcuB0963