Csa1G043230 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G043230
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCDT1-like protein a, chloroplastic; contains IPR014939 (CDT1 Geminin-binding domain-like)
LocationChr1 : 4798417 .. 4801657 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGCAAAATTTCCCTCTAATTCACTAGTGGCAATCTCCCCTTTTCCTCATCAGCTCACTTGCTAGTAATCCAGGTTTTTCTTGTTCTTCCAATTTCTTCCCTTCAGTTGCTTCTCTGATTCTTCTTTTTACCATTACTTAATCTGCCGTTTTGTAGATCTTATACGGTATTTAATTAAAGGGTTAAATATTGTTGTAATTTATTGTGTTCATTCACTTTCTTTGACCATCAACTGTTCATTTCTCCCTTGTATGCCATGGTAATTAGGGGTTTATTGAAAAGAAAATTAATCTATTGATTTACTGGCTTTTTCTTGATTACATTTGTTGTTACTTTAATTTCTGGGAGATTTTGTCGTAGGCCACATTGTTGAGGAAATGATCAAAACGCTCTTTGAAGTCATTGTTTTTTTTTCTAATCTTTATGATGTTCCATGGTATTAAAGTTCTATTAATTTTTTTTTTTTGTAGGGGACACTTGTTGAGTTGCGTTCTAGAATGGGTGAAAAAACATTTGAAGATGGTGGCCAAAATCTTTCAGCCATTGAAACTAATCCTTCTAAAGGGATTTATGGTAATGAGAATTCAGAAAGTAACATTGCATGTATGACACCGGAGAAAGCTGATGAGTATTTGAAAGGAAAATTGAAAGAAGATGGAATCAAACTTCAAGAAAAGTGAGTGTCTAAAACGTTTAGGGTATAAAATTTGTGTTGGTTGCTAAGCTTTGTTCACAAGCATTTCATAACGTTTATGTTAGTTTTTTGTTAGATAATTTACTTAAAAAGTTGAAATGGTTTTTTAATGATAAGTTTGTGGATTTAAACATAATGGAAAATGAAATTATCTTGAATATTTATGGAAGAAAATAAGAATTTTAACAACATTTTGTCACTATAAATTTGACTTTACTTGAACTCAATTGGATTATATGCAGATGCCGGGCAATTGTAGAGTTCTTTACTTGCTTTACTTCCTCGTTGAGGCTGCTTAAAATGAGAAAAAGGATGTCTACCTTTCACAATGTGTCCGGCCAGGTGTCGATTATGACAAAAAGGTATGTCGTAGCATTTGTTTAACTTAATAGTTTCGTTGCATAGATAAAATGAAATGAAATGTTTAGGTTAAGACAGAAAAATAAGCAGGTGTGCAAAAGTAAACTACTTATACTAAATAATGAATATAATCTTAACATTTCTCCTTGGCAGTCATAATTGGAAAAGGAATTCTACTAAGTTTTTTAGAAAATTTTCGTCAGGTTTAAAATCACTCCCAAATGTTTGTTAACTAAAATTTGTGTTCTTTGTTCTTTTTCTGTTCCAGAATGTTTTTGGACAAACATCTAGCACAGATATTATATATCATTCCCGAAGCAGTGAATATTGATAAAGTGATGATTCACGACAAGAAGACATTGTGCATGAAACCGGAAATGATAATCAATCTTCAGTTAGATGTTGTAAAAGGTCACTCTGAGCATTCTGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTATCAAAATACTTTGCAATGCATCCGGAGGTACTTTTGTACATTATTAGAAACTGATTACGCTATAATTCAAACGAAACCACACAAAGTTATACCAAAACGAGCATGTTTTTTGGGTTTTTGACGAGTTTAGAAGCTTAATTCTAAAAAAAACAAAACGGTTACCAAATGTAACCGTAGTTATTTTTCTTATTTGGACCTAAATCAGATCCTTTCATGCTCATATTTTGATTATATTCTTCCAGAAAAGTGAAGTTCCGGAAGGGGAATTACCATGGCCCTTCAACCGAAGAAAAATATTCTCTCTCGATCAATTGTTTGATAATTCTTCAGCTAGATCTCGGCCAATATCCATAGATTCCGATTCCGATTTGACTTTAGAAGAACTTTGTCCACATTTATCTTTCAAGCGACATTTTTCTAAGAAATTCATTTCTAGCATAGAGATATCAGAACTAGTTGCATCTTCTATTGTTGTTTCACCATCCATTCCAGCTAAGTTGCTTGAAGATATTCCGACGATCTCTCCTCAAGTTGCTACTGCTAATTCTTCGGACAGTCCTCTTGTTAAGTCTGTCATGTCTTCTGCTTCTAGCAGCATAATGACACAAACACCGGTACAGTTAACACCAAAGAGATCAATGCTGCCAAGTTCAGAGGTGAAAACAAGGAAACCTGCAAGTGTAGGAAGTGTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAAGTGATAATGGCAAGTCGAGTCTAGGTGTGGATGGTTTGCAATGCTATGAAATCCCTGGAAAGAAGAACTTTCTCGACGAGCATATCCAAAAGAAGAATTATACCAGTAAAGAAGTAATTAGTCAAGAATCATCTTCTTGCTTGCCTGAACTTGTTTGTGTTGTCTACAACATTTTCAAGTCTGTGAATTGCTCTTCAATTACCAAGGAGGAGCTCGTGCACAAGATTATAATGAATTGCCTTGATATTACTGAGAGAAGTATGTATGGGTTTTTTAAGTAATTAATCCTAATTTGATATGAATTTTTGTTTGACGTACTTGATTGCTTGCAGGAGAAGTGGAAGAGAGAATCGAGCAGCTCGAAAAGTTGGTTCCGAATTGGATCTCCAAGAAATTGACAATTAGTGGGGATGTTACTTTTAGGTGAGTGATTCAAGTGTCCTCTACAGGCCTTTTTTAAAAAAGTATCTGAGGTTAAATATTTGTGGAAGTTCATTTATAATTTTTTTTTTTCAATAATCGACTATGAAATATTAGCTTTAGTGACTGACATTCTCAATAGAAATATAACTAGATGTGACTCCTTGAATGCATTTGTGTATACATGCTAACAACAGTGTCACTTGCTGCAGCATCAACACAAAGGAAGACTTGGAATCGGTTGTGGCGAAAACAGCTCGCATTTGAGAAGTTCCCAAAATGGGGTCTCCACGTAACATATTGTCTTGAGTCTCTTATATTTTTACAGTTAAATTGATTTTGGTCCTTATGGTTTGGAAAAAAGTTGGAATTTGGTCTCTACTAGAGTATTTATGAAACCATGGAGACTTGGAAAATTCTTTCCATGGCAATTTTTTTGAACAAGTTTTCATAGGGCTAATCAAATGAGAGTTGTTTGATTTCTCTATTTCCATTGTTTTGTATAGTATCTTGATTGGTGAAATGTGCAAAATTGCCAGTGATCTTACCCAATTATTCAGCTG

mRNA sequence

ATGGGTGAAAAAACATTTGAAGATGGTGGCCAAAATCTTTCAGCCATTGAAACTAATCCTTCTAAAGGGATTTATGGTAATGAGAATTCAGAAAGTAACATTGCATGTATGACACCGGAGAAAGCTGATGAGTATTTGAAAGGAAAATTGAAAGAAGATGGAATCAAACTTCAAGAAAAATGCCGGGCAATTGTAGAGTTCTTTACTTGCTTTACTTCCTCGTTGAGGCTGCTTAAAATGAGAAAAAGGATGTCTACCTTTCACAATGTGTCCGGCCAGGTGTCGATTATGACAAAAAGAATGTTTTTGGACAAACATCTAGCACAGATATTATATATCATTCCCGAAGCAGTGAATATTGATAAAGTGATGATTCACGACAAGAAGACATTGTGCATGAAACCGGAAATGATAATCAATCTTCAGTTAGATGTTGTAAAAGGTCACTCTGAGCATTCTGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTATCAAAATACTTTGCAATGCATCCGGAGAAAAGTGAAGTTCCGGAAGGGGAATTACCATGGCCCTTCAACCGAAGAAAAATATTCTCTCTCGATCAATTGTTTGATAATTCTTCAGCTAGATCTCGGCCAATATCCATAGATTCCGATTCCGATTTGACTTTAGAAGAACTTTGTCCACATTTATCTTTCAAGCGACATTTTTCTAAGAAATTCATTTCTAGCATAGAGATATCAGAACTAGTTGCATCTTCTATTGTTGTTTCACCATCCATTCCAGCTAAGTTGCTTGAAGATATTCCGACGATCTCTCCTCAAGTTGCTACTGCTAATTCTTCGGACAGTCCTCTTGTTAAGTCTGTCATGTCTTCTGCTTCTAGCAGCATAATGACACAAACACCGGTACAGTTAACACCAAAGAGATCAATGCTGCCAAGTTCAGAGGTGAAAACAAGGAAACCTGCAAGTGTAGGAAGTGTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAAGTGATAATGGCAAGTCGAGTCTAGGTGTGGATGGTTTGCAATGCTATGAAATCCCTGGAAAGAAGAACTTTCTCGACGAGCATATCCAAAAGAAGAATTATACCAGTAAAGAAGTAATTAGTCAAGAATCATCTTCTTGCTTGCCTGAACTTGTTTGTGTTGTCTACAACATTTTCAAGTCTGTGAATTGCTCTTCAATTACCAAGGAGGAGCTCGTGCACAAGATTATAATGAATTGCCTTGATATTACTGAGAGAAGAGAAGTGGAAGAGAGAATCGAGCAGCTCGAAAAGTTGGTTCCGAATTGGATCTCCAAGAAATTGACAATTAGTGGGGATGTTACTTTTAGCATCAACACAAAGGAAGACTTGGAATCGGTTGTGGCGAAAACAGCTCGCATTTGA

Coding sequence (CDS)

ATGGGTGAAAAAACATTTGAAGATGGTGGCCAAAATCTTTCAGCCATTGAAACTAATCCTTCTAAAGGGATTTATGGTAATGAGAATTCAGAAAGTAACATTGCATGTATGACACCGGAGAAAGCTGATGAGTATTTGAAAGGAAAATTGAAAGAAGATGGAATCAAACTTCAAGAAAAATGCCGGGCAATTGTAGAGTTCTTTACTTGCTTTACTTCCTCGTTGAGGCTGCTTAAAATGAGAAAAAGGATGTCTACCTTTCACAATGTGTCCGGCCAGGTGTCGATTATGACAAAAAGAATGTTTTTGGACAAACATCTAGCACAGATATTATATATCATTCCCGAAGCAGTGAATATTGATAAAGTGATGATTCACGACAAGAAGACATTGTGCATGAAACCGGAAATGATAATCAATCTTCAGTTAGATGTTGTAAAAGGTCACTCTGAGCATTCTGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTATCAAAATACTTTGCAATGCATCCGGAGAAAAGTGAAGTTCCGGAAGGGGAATTACCATGGCCCTTCAACCGAAGAAAAATATTCTCTCTCGATCAATTGTTTGATAATTCTTCAGCTAGATCTCGGCCAATATCCATAGATTCCGATTCCGATTTGACTTTAGAAGAACTTTGTCCACATTTATCTTTCAAGCGACATTTTTCTAAGAAATTCATTTCTAGCATAGAGATATCAGAACTAGTTGCATCTTCTATTGTTGTTTCACCATCCATTCCAGCTAAGTTGCTTGAAGATATTCCGACGATCTCTCCTCAAGTTGCTACTGCTAATTCTTCGGACAGTCCTCTTGTTAAGTCTGTCATGTCTTCTGCTTCTAGCAGCATAATGACACAAACACCGGTACAGTTAACACCAAAGAGATCAATGCTGCCAAGTTCAGAGGTGAAAACAAGGAAACCTGCAAGTGTAGGAAGTGTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAAGTGATAATGGCAAGTCGAGTCTAGGTGTGGATGGTTTGCAATGCTATGAAATCCCTGGAAAGAAGAACTTTCTCGACGAGCATATCCAAAAGAAGAATTATACCAGTAAAGAAGTAATTAGTCAAGAATCATCTTCTTGCTTGCCTGAACTTGTTTGTGTTGTCTACAACATTTTCAAGTCTGTGAATTGCTCTTCAATTACCAAGGAGGAGCTCGTGCACAAGATTATAATGAATTGCCTTGATATTACTGAGAGAAGAGAAGTGGAAGAGAGAATCGAGCAGCTCGAAAAGTTGGTTCCGAATTGGATCTCCAAGAAATTGACAATTAGTGGGGATGTTACTTTTAGCATCAACACAAAGGAAGACTTGGAATCGGTTGTGGCGAAAACAGCTCGCATTTGA

Protein sequence

MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSPSIPAKLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI*
Homology
[Close]
BLAST of Csa1G043230 vs. Swiss-Prot
Match: CDT1B_ARATH (CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 6.7e-36
Identity = 132/471 (28.03%), Postives = 222/471 (47.13%), Query Frame = 1 

Query: 30  SESNIACMTPEKADE---YLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKRMST 89
           SES  +  TP K  +   +      E  IKL E+   + EFF    +++RLLK++   +T
Sbjct: 16  SESLFSTKTPIKTVKRQIFSSSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTT 75

Query: 90  FHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLD-- 149
           + N+  ++  +T R+F   HLAQ+ +I PEA+ + +V+   + T CMKP + I L  D  
Sbjct: 76  YANICPKIEYLTNRIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAI 135

Query: 150 VVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKIFSLDQLFDNSS 209
           VV+     + ++ L KVF S++  +   HP K E+P+  LP PFN  +  S   +   S 
Sbjct: 136 VVEDTICGTKYMELRKVFHSKLVDFRKAHP-KDEIPKELLPEPFNSPQRDSYSGIV--SV 195

Query: 210 ARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSP--------- 269
               P       D+ +EE+      +     K I    +S  + S IV +P         
Sbjct: 196 GLGEPKLEVGGFDVHMEEI----EQEEQDVNKVIPDSTLSH-IESRIVETPVKDLSTPSK 255

Query: 270 --SIPAKLLEDIPTI---------SPQVATANS--SDSPLVKSVMSSASSSIMTQTPVQL 329
             S P +L+   PT+         +P+    NS  S + L +    S +     +  ++ 
Sbjct: 256 DLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEK 315

Query: 330 TPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGKKN 389
               +      +   +   + SV  P+ R LNF  +E +    ++  D +       K N
Sbjct: 316 DDIGNESDDKGINYEEDGLLQSVKGPS-RSLNFDTLEEE----TIVKDDISNESGDEKSN 375

Query: 390 FLDEHIQKKNYTSKEVISQESSSC----LPELVCVVYNIFKSVNCSSITKEELVHKIIMN 449
           +  ++    +   + +I +  +      LP+LV +++ +F S N + ITKEEL++KII N
Sbjct: 376 YEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKIIAN 435

Query: 450 CLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK 470
            ++IT+RREVEE++  + +LVP+WIS+    SGD+   IN     E+V A+
Sbjct: 436 QINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVRINKMSTAETVRAR 473

[Close]
BLAST of Csa1G043230 vs. Swiss-Prot
Match: CDT1A_ARATH (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.6e-26
Identity = 92/280 (32.86%), Postives = 135/280 (48.21%), Query Frame = 1 

Query: 38  TPEKADEYLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIM 97
           +P K     K   KE   KL EK   + +FF    +S+ L K+R    TF N+S Q+  +
Sbjct: 95  SPSKRKSSNKNAEKE---KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHL 154

Query: 98  TKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGHSE---HSD 157
           T+R F   HLAQI +I+PEA+ I +V+IHD+ T CMKP++ + L  D V+ + +    S 
Sbjct: 155 TERRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESK 214

Query: 158 FLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKIFSLDQLFDNSSARSRPISIDS 217
            +AL KVF +R++ +   HP+  EVPE  LP PFNRRK        +NS+   + +S   
Sbjct: 215 KIALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRK------PVENSNVEVKRVS--- 274

Query: 218 DSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSPSIPAKLLEDI--PTISPQV 277
                +EE+               +SI  S+L +S I    S P K    +  PT S Q+
Sbjct: 275 ---SLMEEM---------------ASIPASKLFSSPIT---STPVKTTSSLAKPT-SSQI 334

Query: 278 ATANSSDSPLVKSVMSSASSSIMTQTPVQLTPKRSMLPSS 313
             A +   P       + S   +  TPV+     +  PS+
Sbjct: 335 NIAPTPTKPTSTPAKQTLSEINILPTPVKPVSTLAKFPST 340


HSP 2 Score: 75.9 bits (185), Expect = 1.4e-12
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1 

Query: 385 SCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWIS 444
           +CLP+L  V++ + +S+    ITKEELVHKII    DIT+R+EVEE++  L+++VP W+S
Sbjct: 473 ACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMS 532

Query: 445 KKLTISGDVTFSIN 459
           +K + SGDV   IN
Sbjct: 533 EKKSSSGDVLVCIN 546

[Close]
BLAST of Csa1G043230 vs. TrEMBL
Match: A0A0A0LQM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043230 PE=4 SV=1)

HSP 1 Score: 930.2 bits (2403), Expect = 9.7e-268
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 1 

Query: 1   MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEK 60
           MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEK
Sbjct: 1   MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEK 60

Query: 61  CRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNI 120
           CRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNI
Sbjct: 61  CRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNI 120

Query: 121 DKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVP 180
           DKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVP
Sbjct: 121 DKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVP 180

Query: 181 EGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISS 240
           EGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISS
Sbjct: 181 EGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISS 240

Query: 241 IEISELVASSIVVSPSIPAKLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPV 300
           IEISELVASSIVVSPSIPAKLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPV
Sbjct: 241 IEISELVASSIVVSPSIPAKLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPV 300

Query: 301 QLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGK 360
           QLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGK
Sbjct: 301 QLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGK 360

Query: 361 KNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCL 420
           KNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCL
Sbjct: 361 KNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCL 420

Query: 421 DITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI 474
           DITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI
Sbjct: 421 DITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI 473

[Close]
BLAST of Csa1G043230 vs. TrEMBL
Match: A0A166BN76_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011408 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69
Identity = 182/476 (38.24%), Postives = 263/476 (55.25%), Query Frame = 1 

Query: 31  ESNIACMTPEKADEYLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNV 90
           +S++   TP KA+E L  + + +  +L +K + + E F   TSSLRLL +RK+  TF NV
Sbjct: 29  QSDVLSRTPAKANETLPSRDRREATELPQKYKTMAEVFNRMTSSLRLLSLRKKSPTFKNV 88

Query: 91  SGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGHS 150
           S QV I+ +R F  KHLAQI+YI+PEAV  D+++IH++KT+CM+PEM I L  D+VKGH 
Sbjct: 89  SSQVQILARREFSYKHLAQIMYILPEAVKTDRILIHNEKTMCMEPEMKITLLFDIVKGHD 148

Query: 151 EHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKI-FSLDQLFDNSSARSRP 210
           E SD+LAL  +F SR+  + + + E  E+PE ELP PFN++ I  + D L  +SS    P
Sbjct: 149 EGSDYLALFVLFTSRLFDFLSANTEGCEIPEAELPEPFNKQSINITEDSLTLDSSTVPTP 208

Query: 211 ISIDSDSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSPS------------- 270
                +++L+     P  SF RHFS+K I+  E ++L+AS+  + P+             
Sbjct: 209 TL--GEAELSNASNLPS-SFSRHFSQKAIT--ERTQLLASADPLLPTKCDSLTQEDTEPQ 268

Query: 271 --IPAKLLEDIPTISPQVATANSSDSPLVKS----VMSSASSSIMTQTPVQLTPKRSMLP 330
              PA  ++   + +P   T     +P+         +S   ++M +TP Q+TP+RS LP
Sbjct: 269 KQSPASCVDSTISTNPVELTKPPCFNPITCENTPIKFTSEKENLMVETPAQMTPQRS-LP 328

Query: 331 SSEVKTRKPASVGSVCKP------AKRFLNFSGMESDN---------------------G 390
           S +VK +     GSV +       AKR L+FS  E                        G
Sbjct: 329 SCDVKLK----TGSVLQKTTSSLSAKRTLDFSYSEGKGRILDFGDDITEHGEVAHNTRPG 388

Query: 391 KSSLGV--DGLQCYEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSV 450
           + +  V  +   C  +P  K             S     ++  SCLP++V VV NIF+  
Sbjct: 389 RETTDVVENETACLAVPPVKVHSCTSDNSIFNQSGSTSRKQILSCLPDIVVVVNNIFQCA 448

Query: 451 NCSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSI 458
           + +SITKEELVHKIIMN LDI ERR VEE+I+ LEKLVP+WI KKL  SGD+ + +
Sbjct: 449 DRTSITKEELVHKIIMNNLDIVERRVVEEQIDLLEKLVPDWIGKKLAPSGDILYKL 494

[Close]
BLAST of Csa1G043230 vs. TrEMBL
Match: M5WF26_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025414mg PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.3e-67
Identity = 175/452 (38.72%), Postives = 260/452 (57.52%), Query Frame = 1 

Query: 62  RAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNID 121
           R + +FF     SLRLL++RKR  TF N+S QV ++ KR FL KHLAQ+ +I+PEA+ ID
Sbjct: 2   RIMADFFDHMNCSLRLLRLRKRSPTFQNISTQVEVLAKRKFLYKHLAQMKFILPEAIKID 61

Query: 122 KVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPE------ 181
           ++++ D KT CMK +M I L  D+V+GH E SDF+A+ +VFASR+  +FAMHPE      
Sbjct: 62  RILVQDNKTPCMKTDMNITLLFDIVEGHGEVSDFIAVRQVFASRLINFFAMHPEIKAMNS 121

Query: 182 --------KSEVPEGELPWPFN-RRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPH 241
                     +VPE  LP PF+ RR+I  L++L  NSS   +  S  +++ L LE++ P+
Sbjct: 122 CICISSVKACDVPEAILPEPFSQRREIPVLEKLPINSSMEFKATS--NETKLFLEKVHPY 181

Query: 242 LSFKRHFSKK-FISSIEISELVASSIVVSPS-------IPAKLLEDIPTIS--PQVAT-- 301
               RHFS+   ++  E ++L+AS + +  S       I  +  ++ P +S  P   T  
Sbjct: 182 PYVSRHFSRNAVVAEAEKAQLLASPVPLPSSGGMNNQGIKNEQKKEFPVLSSKPDSITEL 241

Query: 302 --------------------------ANSSDSPLVKSVM---SSASSSIMTQTPVQLTPK 361
                                       SS S + +S +   +S++ SIMT+TP  LTP+
Sbjct: 242 DIKKGQQNKPCSKFSIINHSVQLNHPQRSSASSVSESPLVKLTSSADSIMTETPTPLTPR 301

Query: 362 RSMLPSSEVKTRKPASVGSVC-KPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGK-KNF 421
           RSM PS + K     S  + C KPAKR L+FS +E D        D   CY++  +    
Sbjct: 302 RSM-PSCDAKHVTMNSQSASCHKPAKRILDFSHLEGDKISLDCTADESDCYKVVEQILGC 361

Query: 422 LDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDIT 456
            +E ++K   ++  ++ Q+ S+CL +LV ++++IFKS+N S ITKEELVHKIIMN  D+ 
Sbjct: 362 GNEDLEKSQKSA--LLCQQMSACLADLVTIIHSIFKSLNWSPITKEELVHKIIMNNFDVV 421

[Close]
BLAST of Csa1G043230 vs. TrEMBL
Match: A0A103YDV7_CYNCS (CDT1 Geminin-binding domain-like protein OS=Cynara cardunculus var. scolymus GN=Ccrd_014296 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.5e-66
Identity = 170/464 (36.64%), Postives = 257/464 (55.39%), Query Frame = 1 

Query: 24  IYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKR 83
           I+ +++ ++N    TPEK +E L  + K++  KL EK   + EFF   T+SLRLL + K+
Sbjct: 137 IHASQHLDANFVTPTPEKTEETLNIRCKKEPAKLPEKYGTLSEFFDRMTTSLRLLNLHKQ 196

Query: 84  MSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQL 143
           + TF N+  QV  +TKR F  +HLAQI +I PEAV  DK+++H+KKTL M+PE+ + L  
Sbjct: 197 LPTFQNICRQVETLTKRKFSYRHLAQIKFIFPEAVQADKILLHNKKTLSMEPELKVTLLF 256

Query: 144 DVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKI-FSLDQLFDN 203
           DV++GH EHS ++AL   F  R+ K+   HPE  +VPE ELP PFN+R I  S + L  +
Sbjct: 257 DVIEGHIEHSPYIALCHTFFHRLIKFVNTHPEGCDVPEAELPEPFNQRDITISANSLPVD 316

Query: 204 SSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSPSIPAKLL 263
           SS  + P +ID    L    L P  SF RHFS+K   SI+ +EL  +S+      P+ + 
Sbjct: 317 SSVETLP-NIDEAELLNPSHLQP--SFSRHFSRKDEESIK-TELSPTSV-----SPSSIT 376

Query: 264 EDIPTISPQVATANSSDSPLVKSVMSSAS-----------SSIMTQTPVQLTPKRSMLPS 323
            D  T   ++  ++ SD       +  A+           + + T+TP   TPKRS+   
Sbjct: 377 SD-TTNDRKIGYSSCSDPVKHDKALQVANEETPMKPPLVLAEVTTETPDLSTPKRSVPTE 436

Query: 324 SEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGKKNFLDEHIQKK 383
           +++K+       +    AKR L+FS  + +              E   +K    + ++ +
Sbjct: 437 NKIKSVISQKGMASNLFAKRSLDFSTADDEG-------------EFLDEKTTCAKKVEDR 496

Query: 384 NYTSKEV------ISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITER 443
              +  +      + Q++SSCL +LV  ++NIF S   SSITK ELVHK+++N  DI E 
Sbjct: 497 TSKNDSIAQSGLKVHQDTSSCLSDLVETIHNIFCSAQWSSITKGELVHKVLVNNFDIIES 556

Query: 444 REVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK 470
            E+EE+IE L   VP+WISKK+   GD  ++IN   DL+S+  K
Sbjct: 557 GEIEEQIELLVNKVPDWISKKVDPCGDFLYNINKGSDLKSITEK 577

[Close]
BLAST of Csa1G043230 vs. TrEMBL
Match: A0A072UBJ2_MEDTR (DNA replication factor CDT1-like protein OS=Medicago truncatula GN=MTR_6g477680 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.8e-62
Identity = 168/454 (37.00%), Postives = 259/454 (57.05%), Query Frame = 1 

Query: 31  ESNIACMTPEKADE-YLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHN 90
           + +IAC TPEK  E  L   LK+   +L EK + I + F+  + +LRLL +RK+  TF N
Sbjct: 11  DKSIACPTPEKKTEPLLATNLKDSNTQLPEKYKNIGDLFSDMSCALRLLHLRKKSPTFQN 70

Query: 91  VSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGH 150
           +  +V ++ KR F   HLAQ+ YI+P+ + I+KV++ DKK+LCMKP++ I L  DVV+ H
Sbjct: 71  ICNKVEVLAKRNFSYAHLAQMKYILPKGIEIEKVVVVDKKSLCMKPDLKITLVFDVVEDH 130

Query: 151 SEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKIFSLDQLFDNSSARSRP 210
           SE S  LAL + F S++  +F +HPE +++PE  LP PF++R    + +  D +   S+ 
Sbjct: 131 SEQSADLALIRYFNSKLINFFNLHPEVTDIPEAALPEPFSQRPYNLIFK--DGTVNLSKE 190

Query: 211 ISIDSDS-DLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSPSIPAKLLEDIPTI 270
           +S  S+  +L+L  L    SFKRHFS+K +++   +ELV S                   
Sbjct: 191 LSSTSNEIELSLNNLHLSPSFKRHFSQKNVAN--ETELVQS------------------F 250

Query: 271 SPQVATANSSDSPLVKSVMSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPAS--VGSVC 330
           S    + +S +S  + +       +++T TP Q  P+R +L  S+VK +K  +   GS  
Sbjct: 251 SSSENSMSSHESDWLDN-----QRNLLTHTPAQSAPERLLL-GSDVKLQKMTAQKSGSCF 310

Query: 331 KPAKRFLNFSGMES--------DNGKSSLGV-DGLQCYEIPGKKNFLDEHI----QKKNY 390
           KPAKR L+F+  E         D  K S G  +  + ++       +DE++    QK N 
Sbjct: 311 KPAKRVLDFTLTEGSDAFDSRVDMSKPSRGCSEDFKSFDSVSPPQEVDENLSHSFQKINV 370

Query: 391 TSKEVISQESS-SCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEERI 450
               +++ +++ S L ELV V+ +IF SV  +S+TKEEL+ KI+MNCLD  + RE EE+I
Sbjct: 371 DQHCLVASDNNPSSLVELVNVIDSIFDSVKRTSMTKEELLQKIMMNCLDFVKIREAEEQI 430

Query: 451 EQLEKLVPNWISKKLTISGDVTFSINTKEDLESV 467
           E LEK VP+W+ KK+  SGD  + +    DL+SV
Sbjct: 431 EILEKTVPDWLCKKVVSSGDTMYCVKNALDLDSV 436

[Close]
BLAST of Csa1G043230 vs. TAIR10
Match: AT3G54710.1 (AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B)

HSP 1 Score: 153.3 bits (386), Expect = 3.8e-37
Identity = 132/471 (28.03%), Postives = 222/471 (47.13%), Query Frame = 1 

Query: 30  SESNIACMTPEKADE---YLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKRMST 89
           SES  +  TP K  +   +      E  IKL E+   + EFF    +++RLLK++   +T
Sbjct: 16  SESLFSTKTPIKTVKRQIFSSSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTT 75

Query: 90  FHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLD-- 149
           + N+  ++  +T R+F   HLAQ+ +I PEA+ + +V+   + T CMKP + I L  D  
Sbjct: 76  YANICPKIEYLTNRIFSYDHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAI 135

Query: 150 VVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKIFSLDQLFDNSS 209
           VV+     + ++ L KVF S++  +   HP K E+P+  LP PFN  +  S   +   S 
Sbjct: 136 VVEDTICGTKYMELRKVFHSKLVDFRKAHP-KDEIPKELLPEPFNSPQRDSYSGIV--SV 195

Query: 210 ARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSP--------- 269
               P       D+ +EE+      +     K I    +S  + S IV +P         
Sbjct: 196 GLGEPKLEVGGFDVHMEEI----EQEEQDVNKVIPDSTLSH-IESRIVETPVKDLSTPSK 255

Query: 270 --SIPAKLLEDIPTI---------SPQVATANS--SDSPLVKSVMSSASSSIMTQTPVQL 329
             S P +L+   PT+         +P+    NS  S + L +    S +     +  ++ 
Sbjct: 256 DLSTPIRLMSATPTLQLSKRCIELTPEGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEK 315

Query: 330 TPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGKKN 389
               +      +   +   + SV  P+ R LNF  +E +    ++  D +       K N
Sbjct: 316 DDIGNESDDKGINYEEDGLLQSVKGPS-RSLNFDTLEEE----TIVKDDISNESGDEKSN 375

Query: 390 FLDEHIQKKNYTSKEVISQESSSC----LPELVCVVYNIFKSVNCSSITKEELVHKIIMN 449
           +  ++    +   + +I +  +      LP+LV +++ +F S N + ITKEEL++KII N
Sbjct: 376 YEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKIIAN 435

Query: 450 CLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAK 470
            ++IT+RREVEE++  + +LVP+WIS+    SGD+   IN     E+V A+
Sbjct: 436 QINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVRINKMSTAETVRAR 473

[Close]
BLAST of Csa1G043230 vs. TAIR10
Match: AT2G31270.1 (AT2G31270.1 homolog of yeast CDT1 A)

HSP 1 Score: 122.1 bits (305), Expect = 9.3e-28
Identity = 92/280 (32.86%), Postives = 135/280 (48.21%), Query Frame = 1 

Query: 38  TPEKADEYLKGKLKEDGIKLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIM 97
           +P K     K   KE   KL EK   + +FF    +S+ L K+R    TF N+S Q+  +
Sbjct: 95  SPSKRKSSNKNAEKE---KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHL 154

Query: 98  TKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGHSE---HSD 157
           T+R F   HLAQI +I+PEA+ I +V+IHD+ T CMKP++ + L  D V+ + +    S 
Sbjct: 155 TERRFCYSHLAQIKHILPEAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESK 214

Query: 158 FLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKIFSLDQLFDNSSARSRPISIDS 217
            +AL KVF +R++ +   HP+  EVPE  LP PFNRRK        +NS+   + +S   
Sbjct: 215 KIALRKVFRARLADFVKAHPQGDEVPEEPLPEPFNRRK------PVENSNVEVKRVS--- 274

Query: 218 DSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVSPSIPAKLLEDI--PTISPQV 277
                +EE+               +SI  S+L +S I    S P K    +  PT S Q+
Sbjct: 275 ---SLMEEM---------------ASIPASKLFSSPIT---STPVKTTSSLAKPT-SSQI 334

Query: 278 ATANSSDSPLVKSVMSSASSSIMTQTPVQLTPKRSMLPSS 313
             A +   P       + S   +  TPV+     +  PS+
Sbjct: 335 NIAPTPTKPTSTPAKQTLSEINILPTPVKPVSTLAKFPST 340


HSP 2 Score: 75.9 bits (185), Expect = 7.6e-14
Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 1 

Query: 385 SCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWIS 444
           +CLP+L  V++ + +S+    ITKEELVHKII    DIT+R+EVEE++  L+++VP W+S
Sbjct: 473 ACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMS 532

Query: 445 KKLTISGDVTFSIN 459
           +K + SGDV   IN
Sbjct: 533 EKKSSSGDVLVCIN 546

[Close]
BLAST of Csa1G043230 vs. NCBI nr
Match: gi|778657537|ref|XP_011651063.1| (PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus])

HSP 1 Score: 930.2 bits (2403), Expect = 1.4e-267
Identity = 473/473 (100.00%), Postives = 473/473 (100.00%), Query Frame = 1 

Query: 1   MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEK 60
           MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEK
Sbjct: 1   MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEK 60

Query: 61  CRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNI 120
           CRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNI
Sbjct: 61  CRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNI 120

Query: 121 DKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVP 180
           DKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVP
Sbjct: 121 DKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVP 180

Query: 181 EGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISS 240
           EGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISS
Sbjct: 181 EGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISS 240

Query: 241 IEISELVASSIVVSPSIPAKLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPV 300
           IEISELVASSIVVSPSIPAKLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPV
Sbjct: 241 IEISELVASSIVVSPSIPAKLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPV 300

Query: 301 QLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGK 360
           QLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGK
Sbjct: 301 QLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGK 360

Query: 361 KNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCL 420
           KNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCL
Sbjct: 361 KNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCL 420

Query: 421 DITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI 474
           DITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI
Sbjct: 421 DITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI 473

[Close]
BLAST of Csa1G043230 vs. NCBI nr
Match: gi|659066989|ref|XP_008437096.1| (PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 811.2 bits (2094), Expect = 9.4e-232
Identity = 425/489 (86.91%), Postives = 444/489 (90.80%), Query Frame = 1 

Query: 1   MGEKTFEDGGQNLSAIETNPS-----KGIYGNENSESNIACMTPEKADEYLKGKLKEDGI 60
           MGEKTF+DGG N+SAIETNPS     +GI+GN+NSESNIACMTPEKADEYLKGKLKE+ I
Sbjct: 1   MGEKTFDDGGLNVSAIETNPSMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEEI 60

Query: 61  KLQEKCRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIP 120
           KLQEKC+ IVEFFTC TSS+RLLKMRK+MSTFHNVS QVS+MTKRMFLDKHLAQI+YIIP
Sbjct: 61  KLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIP 120

Query: 121 EAVNIDKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPE 180
           EAVNIDKVMIHDKKT CMKPEMII+LQLDVVKGHSEHSDFLALHKVFASRV KYFA+H E
Sbjct: 121 EAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTE 180

Query: 181 KSEVPEGELPWPFNRRKIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSK 240
           K+EVPEG LP PFNRRKIFSLDQL DNS  RSRP SI  DSDLTLEELCPH S KRHFSK
Sbjct: 181 KNEVPEGALPKPFNRRKIFSLDQLSDNSPERSRPTSI--DSDLTLEELCPHSSLKRHFSK 240

Query: 241 KFISSIEISELVASSIVVSPSIPA-----------KLLEDIPTISPQVATANSSDSPLVK 300
           K ISS+EISE VASSIV SPSIPA           KLLEDIPT+ PQVA ANSS+SPLVK
Sbjct: 241 KSISSVEISEPVASSIVFSPSIPACSSLKEEDTNDKLLEDIPTLPPQVAAANSSESPLVK 300

Query: 301 SVMSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGK 360
           SV+SSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGME DNGK
Sbjct: 301 SVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGK 360

Query: 361 SSLGVDGLQCYEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCS 420
           SSLGVD LQ   IPGKKNFLDEH +KKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCS
Sbjct: 361 SSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCS 420

Query: 421 SITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLE 474
           SITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLE
Sbjct: 421 SITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLE 480

[Close]
BLAST of Csa1G043230 vs. NCBI nr
Match: gi|659066993|ref|XP_008437112.1| (PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 687.2 bits (1772), Expect = 2.0e-194
Identity = 362/410 (88.29%), Postives = 374/410 (91.22%), Query Frame = 1 

Query: 75  LRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIHDKKTLCMK 134
           +RLLKMRK+MSTFHNVS QVS+MTKRMFLDKHLAQI+YIIPEAVNIDKVMIHDKKT CMK
Sbjct: 1   MRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIPEAVNIDKVMIHDKKTSCMK 60

Query: 135 PEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPWPFNRRKIF 194
           PEMII+LQLDVVKGHSEHSDFLALHKVFASRV KYFA+H EK+EVPEG LP PFNRRKIF
Sbjct: 61  PEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTEKNEVPEGALPKPFNRRKIF 120

Query: 195 SLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISSIEISELVASSIVVS 254
           SLDQL DNS  RSRP SI  DSDLTLEELCPH S KRHFSKK ISS+EISE VASSIV S
Sbjct: 121 SLDQLSDNSPERSRPTSI--DSDLTLEELCPHSSLKRHFSKKSISSVEISEPVASSIVFS 180

Query: 255 PSIPA-----------KLLEDIPTISPQVATANSSDSPLVKSVMSSASSSIMTQTPVQLT 314
           PSIPA           KLLEDIPT+ PQVA ANSS+SPLVKSV+SSASSSIMTQTPVQLT
Sbjct: 181 PSIPACSSLKEEDTNDKLLEDIPTLPPQVAAANSSESPLVKSVLSSASSSIMTQTPVQLT 240

Query: 315 PKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQCYEIPGKKNF 374
           PKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGME DNGKSSLGVD LQ   IPGKKNF
Sbjct: 241 PKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQ---IPGKKNF 300

Query: 375 LDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDIT 434
           LDEH +KKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDIT
Sbjct: 301 LDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDIT 360

Query: 435 ERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI 474
           ERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI
Sbjct: 361 ERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI 405

[Close]
BLAST of Csa1G043230 vs. NCBI nr
Match: gi|731422210|ref|XP_002267629.3| (PREDICTED: CDT1-like protein a, chloroplastic [Vitis vinifera])

HSP 1 Score: 310.8 bits (795), Expect = 4.0e-81
Identity = 206/531 (38.79%), Postives = 292/531 (54.99%), Query Frame = 1 

Query: 9   GGQNLSAIETNPSK--GIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEKCRAIVE 68
           G +   A+  +P K  GI GN NSE+ IA +TP+K  E L    KE  I L +K + I E
Sbjct: 24  GVEKSDALSPSPVKTSGIVGNLNSETEIASLTPQKTSEPLHANFKEKEINLPDKYKTIAE 83

Query: 69  FFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMIH 128
           FF     SLRLL +RK+ +TF N+  QV I+TKR F  +HLAQI YI+PE V ID ++IH
Sbjct: 84  FFDRMNCSLRLLGLRKKPTTFQNICTQVEILTKRKFSYRHLAQIKYILPEVVQIDYILIH 143

Query: 129 DKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELPW 188
           D K+LCMKP+M I+L  DV++GH E S F+AL +VFA R+  +F +HPE  ++PE  LP 
Sbjct: 144 DVKSLCMKPDMKISLLFDVIEGHQEKSTFMALRQVFAYRLLDFFNIHPEGCDIPEAILPE 203

Query: 189 PFNRRKIFSLDQLFD-NSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFI------- 248
           PFN+R    + +    +SS  S+P S   + +L       + SF+RHFS+K +       
Sbjct: 204 PFNQRTQNIIPKSLPVDSSIESQPTS---EVELLANSCHLNPSFRRHFSEKAVVAETGKT 263

Query: 249 -----------SSIEI--------------SELVASSIVVSPSIPAKLLEDIPTISPQVA 308
                      SS +I              SEL + S ++ P +          I PQ +
Sbjct: 264 QLLASLVPLLSSSSDIVTNKEIKSEQHKESSELYSESTIIKPPVGL--------ICPQSS 323

Query: 309 TANSS-DSPLVKSVMSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPA-SVGSVCK-PAK 368
            ++S+ +SP +K  M   S  +M +TP QLTPKRSM PS + K +     +G+ C  P K
Sbjct: 324 VSSSACESPYLKHPM--VSDCLMVETPAQLTPKRSM-PSCDNKLKTVTRQMGTSCHMPTK 383

Query: 369 RFLNFSGMESDNGKSSLGVDGLQCYEI--------------------PGKKNFLDEHIQK 428
           R L+FS +E D    +  +D  +C+++                     G    L +  + 
Sbjct: 384 RSLDFSCLEGDESVLNT-LDEPECHKVIHDTLSQTVEAKGVHVEEEASGSAELLQKVEES 443

Query: 429 KNYTSKE--------VISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDI 474
            + TS          V SQ+ S+CL +LV +++ IF S+ C SITKEELVHKIIMN  DI
Sbjct: 444 NDCTSNAHEMKQRVLVTSQQVSTCLVDLVALIHRIFLSLGCFSITKEELVHKIIMNNCDI 503

[Close]
BLAST of Csa1G043230 vs. NCBI nr
Match: gi|1009131519|ref|XP_015882885.1| (PREDICTED: CDT1-like protein b [Ziziphus jujuba])

HSP 1 Score: 307.4 bits (786), Expect = 4.4e-80
Identity = 212/511 (41.49%), Postives = 294/511 (57.53%), Query Frame = 1 

Query: 9   GGQNLSAIETNPSK--GIYGNENSESN-IACMTPEKADEYLKGKLKEDGIKLQEKCRAIV 68
           GG+  +A+   P K  GI  N+  ESN IAC TPEK +E L  K++E  IK+ +K R I 
Sbjct: 24  GGEKSTALSPAPVKKLGIIENKILESNKIACQTPEKINETLHHKVQEGEIKIPDKYRIIA 83

Query: 69  EFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNIDKVMI 128
           E F     SLRLL + KR++TF N+S QV +++KR F  KHLAQ+ YI PEA  I+K+++
Sbjct: 84  ELFDYMNFSLRLLGLFKRIATFQNISTQVEVLSKRNFSYKHLAQMKYIFPEAFQIEKILL 143

Query: 129 HDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVPEGELP 188
           HDK+TLCMKP M I L  DVV+GH E SDF+AL +VF+ R+ K+F M+PE S+VPE  LP
Sbjct: 144 HDKQTLCMKPYMKITLLFDVVEGHCEVSDFVALRRVFSLRLYKFFMMNPEASDVPEAILP 203

Query: 189 WPFNRR-KIFSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFISSIEIS 248
             F +R +I    +L  +S   S+P SI   +++  E++ P      +FSK F  S  +S
Sbjct: 204 ELFTQRCQIPVPAKLPVDSLLESQPTSI--RTEIFAEKVLP------YFSKNFSQSAAVS 263

Query: 249 EL----VASSIVVSPSIPAKLLEDIPTIS------PQVATANSSD-------SPLVKSVM 308
           E     V++SI        +L E   T S      P+V   N          SPLVK  +
Sbjct: 264 ETGICSVSNSISDEDKWTGQLKETPGTGSESTHRNPEVENHNQCSVGPSTYGSPLVK--L 323

Query: 309 SSASSSIMTQTPVQLTPKRSMLPSSE-----VKTRKPASVGSVCKPAKRFLNFSGMESDN 368
           +S+  S  T+TP Q  P R ++PS +     + +RKP    S  KPAKR L+FS  E D 
Sbjct: 324 TSSDDSFRTETPAQSIPSR-LVPSCDNKQKLISSRKPT---SCLKPAKRVLDFSHSEGDK 383

Query: 369 GKSSLGVDGLQCY-----EIP-------------GKKNFLDEHIQ------KKNYTSKEV 428
              S   D  +CY     +IP             G  + L E  +      +    + E+
Sbjct: 384 SALSYSDDESKCYKSVHQDIPRTYEGFFGDENAIGSSSSLQEMAESFCCPNEDCNQTHEL 443

Query: 429 ISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDITERREVEERIEQLEKL 470
            SQ+SS C+ ++V ++++IFKSV  + ITKEELVHKIIMN  DI ++REV+E I+ LEKL
Sbjct: 444 NSQDSSGCMGDMVGLIHSIFKSVKYTPITKEELVHKIIMNNFDIVDKREVQEHIDHLEKL 503

The following BLAST results are available for this feature:
BLAST of Csa1G043230 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CDT1B_ARATH6.7e-3628.03CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1[more]
CDT1A_ARATH1.6e-2632.86CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1[more]
BLAST of Csa1G043230 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQM9_CUCSA9.7e-268100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043230 PE=4 SV=1[more]
A0A166BN76_DAUCA3.2e-6938.24Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_011408 PE=4 SV=1[more]
M5WF26_PRUPE2.3e-6738.72Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025414mg PE=4 S... [more]
A0A103YDV7_CYNCS2.5e-6636.64CDT1 Geminin-binding domain-like protein OS=Cynara cardunculus var. scolymus GN=... [more]
A0A072UBJ2_MEDTR3.8e-6237.00DNA replication factor CDT1-like protein OS=Medicago truncatula GN=MTR_6g477680 ... [more]
BLAST of Csa1G043230 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54710.13.8e-3728.03 homolog of yeast CDT1 B homolog of yeast CDT1 B[more]
AT2G31270.19.3e-2832.86 homolog of yeast CDT1 A[more]
BLAST of Csa1G043230 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778657537|ref|XP_011651063.1|1.4e-267100.00PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus][more]
gi|659066989|ref|XP_008437096.1|9.4e-23286.91PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo][more]
gi|659066993|ref|XP_008437112.1|2.0e-19488.29PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo][more]
gi|731422210|ref|XP_002267629.3|4.0e-8138.79PREDICTED: CDT1-like protein a, chloroplastic [Vitis vinifera][more]
gi|1009131519|ref|XP_015882885.1|4.4e-8041.49PREDICTED: CDT1-like protein b [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011991Winged helix-turn-helix DNA-binding domain
IPR014939CDT1_Gemini-bd-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU085630cucumber EST collection version 3.0transcribed_cluster
CU110639cucumber EST collection version 3.0transcribed_cluster
CU119568cucumber EST collection version 3.0transcribed_cluster
CU157746cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G043230.1Csa1G043230.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU119568CU119568transcribed_cluster
CU110639CU110639transcribed_cluster
CU157746CU157746transcribed_cluster
CU085630CU085630transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011991Winged helix-turn-helix DNA-binding domainunknownSSF46785"Winged helix" DNA-binding domaincoord: 53..188
score: 2.2
IPR014939CDT1 Geminin-binding domain-likePFAMPF08839CDT1coord: 61..121
score: 1.
IPR014939CDT1 Geminin-binding domain-likeSMARTSM01075CDT1_2coord: 57..186
score: 7.
NoneNo IPR availableunknownCoilCoilcoord: 425..445
scor
NoneNo IPR availablePANTHERPTHR28637FAMILY NOT NAMEDcoord: 25..466
score: 3.2E
NoneNo IPR availablePANTHERPTHR28637:SF2SUBFAMILY NOT NAMEDcoord: 25..466
score: 3.2E