Carg06660 (gene) Silver-seed gourd

NameCarg06660
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionCDT1-like protein a, chloroplastic isoform X1
LocationCucurbita_argyrosperma_scaffold_012 : 255610 .. 259385 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATTTCTTCATTATTGTCGAACTGTTAGTTTAATTTCTCATAGTTTTCTGTCGTCTGATGATCCTGAAGTGATTTTAATTATGTGGTAGGATTAGGATAAGTTGGGGTAAATTCATATTAATCTTGGTTAATTCCTCGATTAATCCTTTATAATTTTAGTTTTCCTATTAGGATTTTTCGTTAATTCTCGAATCCGTGTGATGTATTCGATAGCTTTGATCGATTCTCGGAGCGAATTTTGATCTTTTATCGGTTTTGGCTATGCCAGTTTTTGATTCGATCGGTTGAAGAATGGGTGAAAAAACATGTGAAGATGGTAGCCATGATGTTTCAGCCATTGAAGCTAATCCGGTTCCATTTCCGCCACATAAGGAAGGAGTTTCCGGTAACGTCGTATGTATGACACCGGAGAAGGGAGATGAGTACTCGAAAGAAAAGTCGAAGGAAGGAGGGATCAAACATCAAGAAAAGTGCGTATACTTTTACTAGATGCAATGCCTAAAACATTCGATGTTTAGATCTTGTTTCGATTCCCGAGCTTTGTTAGGCCTACTTCGTTTTTCTTCCTAAACGTTCAAATGTTTTGTTTTAGTTCTTAAAATTTTATATTAAAAACTATTATAGTATGATCGATCATGTCAAACTTGAATGATTCTTAAAACGAACATTTTGTTGCTATAGATTTGACTTAAACTCGATTTGATTGTATGCAGATATCAAAGCATTGTAGAGTTCTTTACTTGCTTGATTTCCTCACTAAGGCTGCTTGGAATGCGCAAGAAGCTATCTACGTTTCACAATGTATCCGGTCAGGTGTCGGTTATGAGTAAAAGGTATATCGTAGCGTTCGCTAATGAATCTACTGAGCTTTTTTACTGCTATCTCGTCGCATTTAACCGATCAACGACGATCAATTTATTAATGTTGTGTCTGAACTAATAGTTTCATTGGGTAGGTGAAACAAAACGGTAGGTTGAAAGAAAATAACTCGAAAACGTGTAAAAACTTTTACTAGATTTCGATGCAAATCGAAATTGGAACGATCGAGGAAATGGACCGAATAGGTTCAATTTGATTAGTTTTGTTCGTTCTTGGTTGATCTAAGTTGATTCGTTTCGTTTCTTTCGCAGAAAGTTTTTACACAGACATCTAGCACAAATAGTGTATATCATTCCAGAAGTTGTGACTATTGATAAAGTGACGATTCATGACAAGAAAACGTCATGCATGAAGTCGGAAATGATAATCAGTCTTCGATTAGATACCGTAGAAGGTCACTCCGAGCATTCCGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTAGCAAAATTCTTTGTCATGCATCCAGAGGTACTTTCTACGTTATAATAAATTGTTCGAGTTTAGAGTTATTTTTCTAGCGACCTAGAGATTAGACGGTTTAGATGTCTTCCATGGTCATGAAAATTTCATAGCTTAAACCTTTGCCTCTTAGCTTTGGGGTCGGAAAAAGGGAAGCAGCACGGATGGACTATGAGTCATTCCAGGAATGGGCTGCATAGAGATGCCTATTTAACCCTCGGAACCCTGGCCCCGTTCAGGAAATGAGTGAGAGAGTGGAGAGAGATTTCTTTCTATTAGCTAAACAAGAACGGGGATTATATTCTTTGACCCTTCTCCCAACCTCGACCCCACCAAATCCCTACCCCGTTCATTTTTTATATCTAAGGTATAAAAATAACTTATATTATATTATTTTCTCCTTAAATATTAGATTGGAATATGGAAATTATCCATTAAAAAATTCTTCGAAATGTTTTTTTATTTTAAAAAAAATTCCTCGTGGGATCCTGATCCTCGTTAATTCTCTATGGAGAATCTCCGTTTTGATTCCCACGTAAATAAATGGAGAATTTTGCGGAGATGAGAATCATTATTTTGTTACATTTGTGACCGTTTTACTAGTAAGCCTCTCGTAATTTAACTATTTTTCTCATTTGGTTTGGCAACCAGAAAAGTGAAGTTCCGGAGGCGGCGCTACCGGAGCCCTTCAACCGGAGAAACATTACGTTCTCTCTCGATCAATCGACCGATGATTCTTCAGAAAAATCTGAGCCAATATCCGTACAAACCGAGTTGTCCTTTGAAGACCTTTATCCAGAGTCAACCTTCAAGAGACATTTCTCTAAGAAAGCTGTCCCTAAAACAGAGCTATCAGAGCCTATTACATCTTCTGTTGTTGGTTTGCCATCTGCTCCAGCTTGTAGTCTGAAAGAGGAGGAAGATAAAAACGATAATTTGCTCGAAGATCTTCCCGTGCAGTCGATCTCGCCTCGAGCCACTGCTAATTCTTCTGAGAGTCCTGTCGTCAAGCCTGCAACGTCTGGTTCTAGCAATATAATTACACAAACCCCGGTACAGTCGACACCGAAAAGATCGATGCTACCGAGCTCTGATGTGAAAATGAGGAAAACTGCAAGTGTAGGAAGTTTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAGGTGATAATGGTCCATTGAGTTTCAGTGTGGATGATTTGCAATGCTATGATATCCCGGAAAAGAGAGATTTCCATTACGAGCGTTACCGAAAGGATTCTTCGAGTGGACGTGTAACTTGTGAAGAATCGTCTTGCTTGCCCGAACTTGTTCGTGTTATCTACAACGTTTTCAAGTCTGTAAATTGCGCTTCGATTACCAAGGAGGAGCTGGTGCACAAGATCATAATGAATAGTCTTGATATTACAGAGCGAAGTATGTATGGTTTTTGTACGTGATTTTGGACGTGAATTTGGTTTGAATTTTTGCTCGACTTTTACGTGTTTTCTTGTAGGAGAGGTGGAAGAGCGGATTGAGCAGCTCGAAAAGTCGGTCCCGAGTTGGATCTCCAAGAAATTGACACCGAGCGGCGATGTTACTTTCAGGTGAATCATTCAAATAACTTTTGTAACCTATAGATATGATTCCCAAGTGGTCTTCTTTGATACAAGATTTGCCTGATTAGGATTTGTGCATATATAGGAAAAATGCTTCATATAGGTTTCTATTTTGCTGTACATGGGTACTAAGAGGGGTGTAAGTGGATCGGATCGGTTTTTTGAGTCGAAACCTACATTGAACCAACCCGAGGGCAGCCGAGTTTTTAGGAAATAAAAAACCGGTATCCAAACCTACATTGAACCAACCCGAGGGCAGCCGTGCTTTTGGAAAGTAAAAAACCGGTTTCCAAACCTACATTGAACCAACCCGAGGGCAGCCGTGCTTTCGGAAAGTAAAAAACCAGTTTCCAATCCTACATTGAACCAACCCGAGGGCAGCCGAGTTTTTAGGAAATAAACAACCGGTCTCCAAACCTACATTGAACCAACCCGAGGGCAGCCGTGCTTTCGGAAAGTAAAAAACCAGTTTCCAAACCTACGTCGAACCAACCCGAGGGCAGCCGAATCGACAAAAGATGTATAGCTTTACTCAAACCGAACCCCACAAACTATTTTTTTCGATTTCGTAATCGAACGAACCATGAATGCATTTGTATAGCTTCTAACAACGGTATCACTCTCTGCAGCATTAGCGCCAAAGAAGACCTAGAATCAGTGGTGGCAAAGACTGCTCCAGTTTGAGAAGCTCCCAACAAAAGGGTCACCACATTGTGTTGTTATGTTTTGTCTGTAATGCTAATTTCAGCGATTGTTCTTTAGAAGTTATTAAAGGCACCTATGTTTTACACATCTTACCTTAGAAAATACATTCAAATC

mRNA sequence

CTCATTTCTTCATTATTGTCGAACTGTTAGTTTAATTTCTCATAGTTTTCTGTCGTCTGATGATCCTGAAGTGATTTTAATTATGTGGTAGGATTAGGATAAGTTGGGGTAAATTCATATTAATCTTGGTTAATTCCTCGATTAATCCTTTATAATTTTAGTTTTCCTATTAGGATTTTTCGTTAATTCTCGAATCCGTGTGATGTATTCGATAGCTTTGATCGATTCTCGGAGCGAATTTTGATCTTTTATCGGTTTTGGCTATGCCAGTTTTTGATTCGATCGGTTGAAGAATGGGTGAAAAAACATGTGAAGATGGTAGCCATGATGTTTCAGCCATTGAAGCTAATCCGGTTCCATTTCCGCCACATAAGGAAGGAGTTTCCGGTAACGTCGTATGTATGACACCGGAGAAGGGAGATGAGTACTCGAAAGAAAAGTCGAAGGAAGGAGGGATCAAACATCAAGAAAAATATCAAAGCATTGTAGAGTTCTTTACTTGCTTGATTTCCTCACTAAGGCTGCTTGGAATGCGCAAGAAGCTATCTACGTTTCACAATGTATCCGGTCAGGTGTCGGTTATGAGTAAAAGAAAGTTTTTACACAGACATCTAGCACAAATAGTGTATATCATTCCAGAAGTTGTGACTATTGATAAAGTGACGATTCATGACAAGAAAACGTCATGCATGAAGTCGGAAATGATAATCAGTCTTCGATTAGATACCGTAGAAGGTCACTCCGAGCATTCCGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTAGCAAAATTCTTTGTCATGCATCCAGAGAAAAGTGAAGTTCCGGAGGCGGCGCTACCGGAGCCCTTCAACCGGAGAAACATTACGTTCTCTCTCGATCAATCGACCGATGATTCTTCAGAAAAATCTGAGCCAATATCCGTACAAACCGAGTTGTCCTTTGAAGACCTTTATCCAGAGTCAACCTTCAAGAGACATTTCTCTAAGAAAGCTGTCCCTAAAACAGAGCTATCAGAGCCTATTACATCTTCTGTTGTTGGTTTGCCATCTGCTCCAGCTTGTAGTCTGAAAGAGGAGGAAGATAAAAACGATAATTTGCTCGAAGATCTTCCCGTGCAGTCGATCTCGCCTCGAGCCACTGCTAATTCTTCTGAGAGTCCTGTCGTCAAGCCTGCAACGTCTGGTTCTAGCAATATAATTACACAAACCCCGGTACAGTCGACACCGAAAAGATCGATGCTACCGAGCTCTGATGTGAAAATGAGGAAAACTGCAAGTGTAGGAAGTTTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAGGTGATAATGGTCCATTGAGTTTCAGTGTGGATGATTTGCAATGCTATGATATCCCGGAAAAGAGAGATTTCCATTACGAGCGTTACCGAAAGGATTCTTCGAGTGGACGTGTAACTTGTGAAGAATCGTCTTGCTTGCCCGAACTTGTTCGTGTTATCTACAACGTTTTCAAGTCTGTAAATTGCGCTTCGATTACCAAGGAGGAGCTGGTGCACAAGATCATAATGAATAGTCTTGATATTACAGAGCGAAGAGAGGTGGAAGAGCGGATTGAGCAGCTCGAAAAGTCGGTCCCGAGTTGGATCTCCAAGAAATTGACACCGAGCGGCGATGTTACTTTCAGCATTAGCGCCAAAGAAGACCTAGAATCAGTGGTGGCAAAGACTGCTCCAGTTTGAGAAGCTCCCAACAAAAGGGTCACCACATTGTGTTGTTATGTTTTGTCTGTAATGCTAATTTCAGCGATTGTTCTTTAGAAGTTATTAAAGGCACCTATGTTTTACACATCTTACCTTAGAAAATACATTCAAATC

Coding sequence (CDS)

ATGGGTGAAAAAACATGTGAAGATGGTAGCCATGATGTTTCAGCCATTGAAGCTAATCCGGTTCCATTTCCGCCACATAAGGAAGGAGTTTCCGGTAACGTCGTATGTATGACACCGGAGAAGGGAGATGAGTACTCGAAAGAAAAGTCGAAGGAAGGAGGGATCAAACATCAAGAAAAATATCAAAGCATTGTAGAGTTCTTTACTTGCTTGATTTCCTCACTAAGGCTGCTTGGAATGCGCAAGAAGCTATCTACGTTTCACAATGTATCCGGTCAGGTGTCGGTTATGAGTAAAAGAAAGTTTTTACACAGACATCTAGCACAAATAGTGTATATCATTCCAGAAGTTGTGACTATTGATAAAGTGACGATTCATGACAAGAAAACGTCATGCATGAAGTCGGAAATGATAATCAGTCTTCGATTAGATACCGTAGAAGGTCACTCCGAGCATTCCGATTTTCTGGCATTACACAAAGTTTTCGCTTCAAGGGTAGCAAAATTCTTTGTCATGCATCCAGAGAAAAGTGAAGTTCCGGAGGCGGCGCTACCGGAGCCCTTCAACCGGAGAAACATTACGTTCTCTCTCGATCAATCGACCGATGATTCTTCAGAAAAATCTGAGCCAATATCCGTACAAACCGAGTTGTCCTTTGAAGACCTTTATCCAGAGTCAACCTTCAAGAGACATTTCTCTAAGAAAGCTGTCCCTAAAACAGAGCTATCAGAGCCTATTACATCTTCTGTTGTTGGTTTGCCATCTGCTCCAGCTTGTAGTCTGAAAGAGGAGGAAGATAAAAACGATAATTTGCTCGAAGATCTTCCCGTGCAGTCGATCTCGCCTCGAGCCACTGCTAATTCTTCTGAGAGTCCTGTCGTCAAGCCTGCAACGTCTGGTTCTAGCAATATAATTACACAAACCCCGGTACAGTCGACACCGAAAAGATCGATGCTACCGAGCTCTGATGTGAAAATGAGGAAAACTGCAAGTGTAGGAAGTTTATGTAAACCTGCAAAAAGGTTTCTCAACTTTTCTGGCATGGAAGGTGATAATGGTCCATTGAGTTTCAGTGTGGATGATTTGCAATGCTATGATATCCCGGAAAAGAGAGATTTCCATTACGAGCGTTACCGAAAGGATTCTTCGAGTGGACGTGTAACTTGTGAAGAATCGTCTTGCTTGCCCGAACTTGTTCGTGTTATCTACAACGTTTTCAAGTCTGTAAATTGCGCTTCGATTACCAAGGAGGAGCTGGTGCACAAGATCATAATGAATAGTCTTGATATTACAGAGCGAAGAGAGGTGGAAGAGCGGATTGAGCAGCTCGAAAAGTCGGTCCCGAGTTGGATCTCCAAGAAATTGACACCGAGCGGCGATGTTACTTTCAGCATTAGCGCCAAAGAAGACCTAGAATCAGTGGTGGCAAAGACTGCTCCAGTTTGA

Protein sequence

MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKEKSKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSKKAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATSGSSNIITQTPVQSTPKRSMLPSSDVKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAPV
BLAST of Carg06660 vs. NCBI nr
Match: XP_022954488.1 (CDT1-like protein a, chloroplastic [Cucurbita moschata])

HSP 1 Score: 847.8 bits (2189), Expect = 1.8e-242
Identity = 475/481 (98.75%), Postives = 477/481 (99.17%), Query Frame = 0

Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKEKSKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSK K KEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKGKLKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120
           YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVY IPEVVTI
Sbjct: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYFIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLRLDTV+GHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFED YP+STFKRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDPYPQSTFKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATXX 300
           ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATXX
Sbjct: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480

Query: 481 V 482
           V
Sbjct: 481 V 481

BLAST of Carg06660 vs. NCBI nr
Match: XP_023541265.1 (CDT1-like protein a, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 802.7 bits (2072), Expect = 6.6e-229
Identity = 453/481 (94.18%), Postives = 459/481 (95.43%), Query Frame = 0

Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKEKSKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEA  VPFPPHKEGVSGNVVCMTPEKGDEYSK KSKEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEAKRVPFPPHKEGVSGNVVCMTPEKGDEYSKGKSKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120
           YQSIVEFFTCLISSLRLLGMRKK STFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI
Sbjct: 61  YQSIVEFFTCLISSLRLLGMRKKPSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLRLDTV+GHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRLDTVKGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSL+QSTD+SSEKSEPISVQTELSFEDLYP+STFKRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLEQSTDNSSEKSEPISVQTELSFEDLYPQSTFKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATXX 300
           ELSEPITSSVVGLPSAPAC +KEEED NDNLLEDLPVQSIS RATANS          XX
Sbjct: 241 ELSEPITSSVVGLPSAPAC-VKEEEDNNDNLLEDLPVQSISSRATANSXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDIPEKRDFH+E YRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIPEKRDFHHEPYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480

Query: 481 V 482
           V
Sbjct: 481 V 480

BLAST of Carg06660 vs. NCBI nr
Match: XP_022994693.1 (CDT1-like protein a, chloroplastic [Cucurbita maxima])

HSP 1 Score: 793.9 bits (2049), Expect = 3.1e-226
Identity = 442/481 (91.89%), Postives = 449/481 (93.35%), Query Frame = 0

Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKEKSKEGGIKHQEK 60
           MGEKTCEDGSHDVSAIEANPVPFPP KEGVSGNV CMTPEKGDEY K K KEGGIKHQEK
Sbjct: 1   MGEKTCEDGSHDVSAIEANPVPFPPQKEGVSGNVGCMTPEKGDEYLKGKLKEGGIKHQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120
           YQSIVE FTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI
Sbjct: 61  YQSIVELFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKVTIHDKKTSCMKSEMIISLR DTV+GHSE+SDFLALHKVFASRVAKFFVMHPEKSEVP
Sbjct: 121 DKVTIHDKKTSCMKSEMIISLRFDTVKGHSEYSDFLALHKVFASRVAKFFVMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSKKAVPKT 240
           EAALPEPFNRRNITFSL+QST +SS  S PISVQTELSFEDL P+ST KRHFSKKAVPKT
Sbjct: 181 EAALPEPFNRRNITFSLEQSTYNSS--SVPISVQTELSFEDLCPQSTCKRHFSKKAVPKT 240

Query: 241 ELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSESPVVKPATXX 300
           ELSEPITSSV GLPSAPACSLKEEED NDNLLEDLPVQSISPRATANSSESPVVKPAT  
Sbjct: 241 ELSEPITSSVAGLPSAPACSLKEEEDNNDNLLEDLPVQSISPRATANSSESPVVKPATSA 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVD 360
           XXXXXXXXXXXXXXXXXXXXXXXX          LCKPAKRFLNFSGMEGDNGPLSFSVD
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXKMRKTASVGSLCKPAKRFLNFSGMEGDNGPLSFSVD 360

Query: 361 DLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420
           DLQCYDI EKR+FHYERYR DSSSG VTCEESSCLPELVRVIYNVFKSVNCASITKEELV
Sbjct: 361 DLQCYDIREKRNFHYERYRTDSSSGGVTCEESSCLPELVRVIYNVFKSVNCASITKEELV 420

Query: 421 HKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAP 480
           HKIIMNSLDITE+REVEERIEQLEKSVPSWISKK TPSGDVTFSIS KEDLESVVAKTAP
Sbjct: 421 HKIIMNSLDITEQREVEERIEQLEKSVPSWISKKSTPSGDVTFSISGKEDLESVVAKTAP 479

Query: 481 V 482
           V
Sbjct: 481 V 479

BLAST of Carg06660 vs. NCBI nr
Match: XP_022137627.1 (CDT1-like protein a, chloroplastic [Momordica charantia])

HSP 1 Score: 567.4 bits (1461), Expect = 4.7e-158
Identity = 303/492 (61.59%), Postives = 358/492 (72.76%), Query Frame = 0

Query: 1   MGEKTCEDGSHDVSAIEANP------VPF--PPHKEGVSG------NVVCMTPEKGDEYS 60
           MGEKT ED   +VSAIE NP      +PF  PP K G+SG      N+ CMTPEK DEY 
Sbjct: 1   MGEKTFEDDGQNVSAIETNPSTDKSKIPFNVPPQKGGISGVQNSDCNIACMTPEKADEYL 60

Query: 61  KEKSKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRH 120
           K K KE  IK QEK Q+IV  F+C+ISSLRLLG+RKKLSTF N+S  VS M+KRKF HRH
Sbjct: 61  KGKLKEEEIKVQEKCQTIVRLFSCMISSLRLLGLRKKLSTFKNISCMVSAMTKRKFFHRH 120

Query: 121 LAQIVYIIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRV 180
           LAQIVYIIPE V I+K+ IHD +T CMK EM+ISL+LD VEGHSEHSDFLAL  +F SRV
Sbjct: 121 LAQIVYIIPEAVNIEKMMIHDMRTLCMKPEMVISLQLDIVEGHSEHSDFLALGTLFTSRV 180

Query: 181 AKFFVMHPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPES 240
            K+FV+HPEKSEVPE  LPEPFN+RN+  SL QS+D SSEKS+ ISV+T   FE+ YP S
Sbjct: 181 KKYFVLHPEKSEVPEGPLPEPFNQRNLMLSLYQSSDSSSEKSQQISVETNSYFEESYPPS 240

Query: 241 TFKRHFSKKAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATA 300
           +FKR+FSK+AVPK E+SEP+  S V LPS  AC L  E+D ND+LLED P QS+SP+A  
Sbjct: 241 SFKRYFSKQAVPKAEISEPVAPSAVDLPSTAACGL-TEQDSNDHLLEDFPAQSVSPQAAD 300

Query: 301 NSSESPVVKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFS 360
            SSES + KP T                                    L KPAKRFLNFS
Sbjct: 301 ESSESSLAKPVTSASSSTMTQTPAQSTPKRSMLPSSDVKMKIVKSTGSLSKPAKRFLNFS 360

Query: 361 GMEGDNGPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVF 420
           GMEGD G  SFS+DD QCYDI  K+DFH++ + + + +  V C+ESSCLPELVRVIY++F
Sbjct: 361 GMEGDIGTSSFSLDDFQCYDIHRKKDFHHDGHCQKNRTSGVICQESSCLPELVRVIYDIF 420

Query: 421 KSVNCASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSIS 479
           KSVNC++ITKEELVHK+IMNSLD+TERREVEE+IE+LEK VP WIS+KLT SGD+TFSI+
Sbjct: 421 KSVNCSNITKEELVHKVIMNSLDVTERREVEEQIERLEKLVPDWISRKLTASGDITFSIN 480

BLAST of Carg06660 vs. NCBI nr
Match: XP_008437096.1 (PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 548.5 bits (1412), Expect = 2.2e-152
Identity = 308/491 (62.73%), Postives = 359/491 (73.12%), Query Frame = 0

Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSG------NVVCMTPEKGDEYSKEKSKEGG 60
           MGEKT +DG  +VSAIE NP       EG+ G      N+ CMTPEK DEY K K KE  
Sbjct: 1   MGEKTFDDGGLNVSAIETNP-SMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEE 60

Query: 61  IKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYII 120
           IK QEK Q+IVEFFTCL SS+RLL MRKK+STFHNVS QVSVM+KR FL +HLAQIVYII
Sbjct: 61  IKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYII 120

Query: 121 PEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHP 180
           PE V IDKV IHDKKTSCMK EMIISL+LD V+GHSEHSDFLALHKVFASRV K+F +H 
Sbjct: 121 PEAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHT 180

Query: 181 EKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSK 240
           EK+EVPE ALP+PFNRR I FSLDQ +D+S E+S P S+ ++L+ E+L P S+ KRHFSK
Sbjct: 181 EKNEVPEGALPKPFNRRKI-FSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSK 240

Query: 241 KAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPV 300
           K++   E+SEP+ SS+V  PS PACS  +EED ND LLED+P  ++ P+ A ANSSESP+
Sbjct: 241 KSISSVEISEPVASSIVFSPSIPACSSLKEEDTNDKLLEDIP--TLPPQVAAANSSESPL 300

Query: 301 VKPA-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDN 360
           VK   +                                    +CKPAKRFLNFSGMEGDN
Sbjct: 301 VKSVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDN 360

Query: 361 GPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGR--VTCEESSCLPELVRVIYNVFKSVN 420
           G  S  VDDLQ   IP K++F  E + K + + +  ++ E SSCLPELV V+YN+FKSVN
Sbjct: 361 GKSSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVN 420

Query: 421 CASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKED 480
           C+SITKEELVHKIIMN LDITERREVEERIEQLEK VP+WISKKLT SGDVTFSI+ KED
Sbjct: 421 CSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKED 480

Query: 481 LESVVAKTAPV 482
           LESVVAKTA +
Sbjct: 481 LESVVAKTARI 484

BLAST of Carg06660 vs. TAIR10
Match: AT2G31270.1 (homolog of yeast CDT1 A)

HSP 1 Score: 141.0 bits (354), Expect = 2.0e-33
Identity = 159/461 (34.49%), Postives = 230/461 (49.89%), Query Frame = 0

Query: 56  KHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIP 115
           K  EKY+++ +FF  L +S+ L  +R    TF N+S Q+  +++R+F + HLAQI +I+P
Sbjct: 110 KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILP 169

Query: 116 EVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHSE---HSDFLALHKVFASRVAKFFVM 175
           E + I +V IHD+ T CMK ++ ++L  D VE + +    S  +AL KVF +R+A F   
Sbjct: 170 EAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKA 229

Query: 176 HPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHF 235
           HP+  EVPE  LPEPFNRR       +  ++S+ + + +S   E                
Sbjct: 230 HPQGDEVPEEPLPEPFNRR-------KPVENSNVEVKRVSSLME---------------- 289

Query: 236 SKKAVPKTEL-SEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSES 295
              ++P ++L S PITS+ V   S+ A     +                           
Sbjct: 290 EMASIPASKLFSSPITSTPVKTTSSLAKPTSSQIXXXXXXXXXXXXXXXXXXXXXXXXXX 349

Query: 296 PVVKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKR---------- 355
                  XXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +P KR          
Sbjct: 350 XXXXXXXXXXFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAARPLKRSNGHTNPDDI 409

Query: 356 -------------FLNFSGMEGDNGPLSFSVDDLQCYDIPEK----------------RD 415
                         LNF     D   + F+ DD+    +PE+                R 
Sbjct: 410 SADPPTKLVRRSLSLNFDSYPEDERTMDFT-DDIPIDQVPEEDVSSDDEILSILPDKLRH 469

Query: 416 FHYERYRK--DSSSGRVTCEES-----SCLPELVRVIYNVFKSVNCASITKEELVHKIIM 467
              E+ RK  +  +  ++  +      +CLP+L  VI+ + +S+    ITKEELVHKII 
Sbjct: 470 AIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIA 529

BLAST of Carg06660 vs. TAIR10
Match: AT3G54710.1 (homolog of yeast CDT1 B homolog of yeast CDT1 B)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-23
Identity = 133/463 (28.73%), Postives = 201/463 (43.41%), Query Frame = 0

Query: 45  YSKEKSKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLH 104
           +S     E  IK  E+++ + EFF  L +++RLL ++   +T+ N+  ++  ++ R F +
Sbjct: 34  FSSSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSY 93

Query: 105 RHLAQIVYIIPEVVTIDKVTIHDKKTSCMKSEMIISLRLD--TVEGHSEHSDFLALHKVF 164
            HLAQ+ +I PE + + +V    + T CMK  + I L  D   VE     + ++ L KVF
Sbjct: 94  DHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYMELRKVF 153

Query: 165 ASRVAKFFVMHPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDL 224
            S++  F   HP K E+P+  LPEPFN          S   S    EP   + E+   D+
Sbjct: 154 HSKLVDFRKAHP-KDEIPKELLPEPFNSPQRD---SYSGIVSVGLGEP---KLEVGGFDV 213

Query: 225 YPESTFKRHFS-KKAVPKTELSEPITSSVVGLP-------------------------SA 284
           + E   +      K +P + LS  I S +V  P                          +
Sbjct: 214 HMEEIEQEEQDVNKVIPDSTLSH-IESRIVETPVXXXXXXXXXXXXXXXXXXXXXXXXLS 273

Query: 285 PACSLKEEEDKNDNLLEDLPVQSISPRATAN--SSESPVVKPATXXXXXXXXXXXXXXXX 344
             C     E  +DN L      +  P  + N  + E   ++                   
Sbjct: 274 KRCIELTPEGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEKDDIGNESDDKGINYEEDG 333

Query: 345 XXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDIPEKRDFH 404
               XXXXXXXXXXXXXXXX                       S DD     + E+    
Sbjct: 334 LLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDDDSLLQSMIERPKTE 393

Query: 405 YERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELVHKIIMNSLDITERR 464
            E++                LP+LV +I+ VF S N   ITKEEL++KII N ++IT+RR
Sbjct: 394 PEKHN---------------LPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRR 453

Query: 465 EVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAK 478
           EVEE++  + + VP WIS+    SGD+   I+     E+V A+
Sbjct: 454 EVEEQLSLMLQLVPDWISETKASSGDLLVRINKMSTAETVRAR 473

BLAST of Carg06660 vs. Swiss-Prot
Match: sp|Q9SJW9|CDT1A_ARATH (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.5e-32
Identity = 159/461 (34.49%), Postives = 230/461 (49.89%), Query Frame = 0

Query: 56  KHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIP 115
           K  EKY+++ +FF  L +S+ L  +R    TF N+S Q+  +++R+F + HLAQI +I+P
Sbjct: 110 KLPEKYENLGKFFEALDNSMLLSKLRGSKPTFSNISKQIEHLTERRFCYSHLAQIKHILP 169

Query: 116 EVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHSE---HSDFLALHKVFASRVAKFFVM 175
           E + I +V IHD+ T CMK ++ ++L  D VE + +    S  +AL KVF +R+A F   
Sbjct: 170 EAIEIKRVLIHDETTCCMKPDLHVTLNADAVEYNDKSKSESKKIALRKVFRARLADFVKA 229

Query: 176 HPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHF 235
           HP+  EVPE  LPEPFNRR       +  ++S+ + + +S   E                
Sbjct: 230 HPQGDEVPEEPLPEPFNRR-------KPVENSNVEVKRVSSLME---------------- 289

Query: 236 SKKAVPKTEL-SEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPRATANSSES 295
              ++P ++L S PITS+ V   S+ A     +                           
Sbjct: 290 EMASIPASKLFSSPITSTPVKTTSSLAKPTSSQIXXXXXXXXXXXXXXXXXXXXXXXXXX 349

Query: 296 PVVKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKR---------- 355
                  XXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +P KR          
Sbjct: 350 XXXXXXXXXXFPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLAARPLKRSNGHTNPDDI 409

Query: 356 -------------FLNFSGMEGDNGPLSFSVDDLQCYDIPEK----------------RD 415
                         LNF     D   + F+ DD+    +PE+                R 
Sbjct: 410 SADPPTKLVRRSLSLNFDSYPEDERTMDFT-DDIPIDQVPEEDVSSDDEILSILPDKLRH 469

Query: 416 FHYERYRK--DSSSGRVTCEES-----SCLPELVRVIYNVFKSVNCASITKEELVHKIIM 467
              E+ RK  +  +  ++  +      +CLP+L  VI+ + +S+    ITKEELVHKII 
Sbjct: 470 AIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIA 529

BLAST of Carg06660 vs. Swiss-Prot
Match: sp|Q9M1S9|CDT1B_ARATH (CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 7.4e-22
Identity = 133/463 (28.73%), Postives = 201/463 (43.41%), Query Frame = 0

Query: 45  YSKEKSKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLH 104
           +S     E  IK  E+++ + EFF  L +++RLL ++   +T+ N+  ++  ++ R F +
Sbjct: 34  FSSSPKPESVIKLPERFEILEEFFNGLDTAIRLLKLKGSSTTYANICPKIEYLTNRIFSY 93

Query: 105 RHLAQIVYIIPEVVTIDKVTIHDKKTSCMKSEMIISLRLD--TVEGHSEHSDFLALHKVF 164
            HLAQ+ +I PE + + +V    + T CMK  + I L  D   VE     + ++ L KVF
Sbjct: 94  DHLAQMKHIYPEAIELKRVLKFVEDTCCMKPRLHIKLNTDAIVVEDTICGTKYMELRKVF 153

Query: 165 ASRVAKFFVMHPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDL 224
            S++  F   HP K E+P+  LPEPFN          S   S    EP   + E+   D+
Sbjct: 154 HSKLVDFRKAHP-KDEIPKELLPEPFNSPQRD---SYSGIVSVGLGEP---KLEVGGFDV 213

Query: 225 YPESTFKRHFS-KKAVPKTELSEPITSSVVGLP-------------------------SA 284
           + E   +      K +P + LS  I S +V  P                          +
Sbjct: 214 HMEEIEQEEQDVNKVIPDSTLSH-IESRIVETPVXXXXXXXXXXXXXXXXXXXXXXXXLS 273

Query: 285 PACSLKEEEDKNDNLLEDLPVQSISPRATAN--SSESPVVKPATXXXXXXXXXXXXXXXX 344
             C     E  +DN L      +  P  + N  + E   ++                   
Sbjct: 274 KRCIELTPEGGDDNSLRSTNSLARGPSRSLNFDTFEEDAIEKDDIGNESDDKGINYEEDG 333

Query: 345 XXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDIPEKRDFH 404
               XXXXXXXXXXXXXXXX                       S DD     + E+    
Sbjct: 334 LLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASDDDSLLQSMIERPKTE 393

Query: 405 YERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEELVHKIIMNSLDITERR 464
            E++                LP+LV +I+ VF S N   ITKEEL++KII N ++IT+RR
Sbjct: 394 PEKHN---------------LPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRR 453

Query: 465 EVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAK 478
           EVEE++  + + VP WIS+    SGD+   I+     E+V A+
Sbjct: 454 EVEEQLSLMLQLVPDWISETKASSGDLLVRINKMSTAETVRAR 473

BLAST of Carg06660 vs. TrEMBL
Match: tr|A0A1S3ATS0|A0A1S3ATS0_CUCME (CDT1-like protein a, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482615 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 1.5e-152
Identity = 308/491 (62.73%), Postives = 359/491 (73.12%), Query Frame = 0

Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSG------NVVCMTPEKGDEYSKEKSKEGG 60
           MGEKT +DG  +VSAIE NP       EG+ G      N+ CMTPEK DEY K K KE  
Sbjct: 1   MGEKTFDDGGLNVSAIETNP-SMDKQIEGIHGNQNSESNIACMTPEKADEYLKGKLKEEE 60

Query: 61  IKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYII 120
           IK QEK Q+IVEFFTCL SS+RLL MRKK+STFHNVS QVSVM+KR FL +HLAQIVYII
Sbjct: 61  IKLQEKCQTIVEFFTCLTSSMRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYII 120

Query: 121 PEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHP 180
           PE V IDKV IHDKKTSCMK EMIISL+LD V+GHSEHSDFLALHKVFASRV K+F +H 
Sbjct: 121 PEAVNIDKVMIHDKKTSCMKPEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHT 180

Query: 181 EKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSK 240
           EK+EVPE ALP+PFNRR I FSLDQ +D+S E+S P S+ ++L+ E+L P S+ KRHFSK
Sbjct: 181 EKNEVPEGALPKPFNRRKI-FSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSK 240

Query: 241 KAVPKTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPV 300
           K++   E+SEP+ SS+V  PS PACS  +EED ND LLED+P  ++ P+ A ANSSESP+
Sbjct: 241 KSISSVEISEPVASSIVFSPSIPACSSLKEEDTNDKLLEDIP--TLPPQVAAANSSESPL 300

Query: 301 VKPA-TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDN 360
           VK   +                                    +CKPAKRFLNFSGMEGDN
Sbjct: 301 VKSVLSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDN 360

Query: 361 GPLSFSVDDLQCYDIPEKRDFHYERYRKDSSSGR--VTCEESSCLPELVRVIYNVFKSVN 420
           G  S  VDDLQ   IP K++F  E + K + + +  ++ E SSCLPELV V+YN+FKSVN
Sbjct: 361 GKSSLGVDDLQ---IPGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVN 420

Query: 421 CASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKED 480
           C+SITKEELVHKIIMN LDITERREVEERIEQLEK VP+WISKKLT SGDVTFSI+ KED
Sbjct: 421 CSSITKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKED 480

Query: 481 LESVVAKTAPV 482
           LESVVAKTA +
Sbjct: 481 LESVVAKTARI 484

BLAST of Carg06660 vs. TrEMBL
Match: tr|A0A0A0LQM9|A0A0A0LQM9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043230 PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 4.2e-147
Identity = 299/487 (61.40%), Postives = 349/487 (71.66%), Query Frame = 0

Query: 1   MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGNVVCMTPEKGDEYSKEKSKEGGIKHQEK 60
           MGEKT EDG  ++SAIE NP       E    N+ CMTPEK DEY K K KE GIK QEK
Sbjct: 1   MGEKTFEDGGQNLSAIETNPSKGIYGNENSESNIACMTPEKADEYLKGKLKEDGIKLQEK 60

Query: 61  YQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTI 120
            ++IVEFFTC  SSLRLL MRK++STFHNVSGQVS+M+KR FL +HLAQI+YIIPE V I
Sbjct: 61  CRAIVEFFTCFTSSLRLLKMRKRMSTFHNVSGQVSIMTKRMFLDKHLAQILYIIPEAVNI 120

Query: 121 DKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVP 180
           DKV IHDKKT CMK EMII+L+LD V+GHSEHSDFLALHKVFASRV+K+F MHPEKSEVP
Sbjct: 121 DKVMIHDKKTLCMKPEMIINLQLDVVKGHSEHSDFLALHKVFASRVSKYFAMHPEKSEVP 180

Query: 181 EAALPEPFNRRNITFSLDQSTDDSSEKSEPISV--QTELSFEDLYPESTFKRHFSKKAVP 240
           E  LP PFNRR I FSLDQ  D+SS +S PIS+   ++L+ E+L P  +FKRHFSKK + 
Sbjct: 181 EGELPWPFNRRKI-FSLDQLFDNSSARSRPISIDSDSDLTLEELCPHLSFKRHFSKKFIS 240

Query: 241 KTELSEPITSSVVGLPSAPACSLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPVVKPA 300
             E+SE + SS+V  PS PA            LLED+P  +ISP+ ATANSS+SP+VK  
Sbjct: 241 SIEISELVASSIVVSPSIPA-----------KLLEDIP--TISPQVATANSSDSPLVKSV 300

Query: 301 -TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLS 360
            +                                    +CKPAKRFLNFSGME DNG  S
Sbjct: 301 MSSASSSIMTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSS 360

Query: 361 FSVDDLQCYDIPEKRDFHYERYRKDSSSGR--VTCEESSCLPELVRVIYNVFKSVNCASI 420
             VD LQCY+IP K++F  E  +K + + +  ++ E SSCLPELV V+YN+FKSVNC+SI
Sbjct: 361 LGVDGLQCYEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSI 420

Query: 421 TKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESV 480
           TKEELVHKIIMN LDITERREVEERIEQLEK VP+WISKKLT SGDVTFSI+ KEDLESV
Sbjct: 421 TKEELVHKIIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESV 473

Query: 481 VAKTAPV 482
           VAKTA +
Sbjct: 481 VAKTARI 473

BLAST of Carg06660 vs. TrEMBL
Match: tr|A0A1S3AT80|A0A1S3AT80_CUCME (CDT1-like protein a, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482615 PE=4 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 261/411 (63.50%), Postives = 307/411 (74.70%), Query Frame = 0

Query: 75  LRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYIIPEVVTIDKVTIHDKKTSCMK 134
           +RLL MRKK+STFHNVS QVSVM+KR FL +HLAQIVYIIPE V IDKV IHDKKTSCMK
Sbjct: 1   MRLLKMRKKMSTFHNVSRQVSVMTKRMFLDKHLAQIVYIIPEAVNIDKVMIHDKKTSCMK 60

Query: 135 SEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHPEKSEVPEAALPEPFNRRNIT 194
            EMIISL+LD V+GHSEHSDFLALHKVFASRV K+F +H EK+EVPE ALP+PFNRR I 
Sbjct: 61  PEMIISLQLDVVKGHSEHSDFLALHKVFASRVLKYFAVHTEKNEVPEGALPKPFNRRKI- 120

Query: 195 FSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSKKAVPKTELSEPITSSVVGLP 254
           FSLDQ +D+S E+S P S+ ++L+ E+L P S+ KRHFSKK++   E+SEP+ SS+V  P
Sbjct: 121 FSLDQLSDNSPERSRPTSIDSDLTLEELCPHSSLKRHFSKKSISSVEISEPVASSIVFSP 180

Query: 255 SAPACSLKEEEDKNDNLLEDLPVQSISPR-ATANSSESPVVKPA-TXXXXXXXXXXXXXX 314
           S PACS  +EED ND LLED+P  ++ P+ A ANSSESP+VK   +              
Sbjct: 181 SIPACSSLKEEDTNDKLLEDIP--TLPPQVAAANSSESPLVKSVLSSASSSIMTQTPVQL 240

Query: 315 XXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDIPEKRD 374
                                 +CKPAKRFLNFSGMEGDNG  S  VDDLQ   IP K++
Sbjct: 241 TPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQ---IPGKKN 300

Query: 375 FHYERYRKDSSSGR--VTCEESSCLPELVRVIYNVFKSVNCASITKEELVHKIIMNSLDI 434
           F  E + K + + +  ++ E SSCLPELV V+YN+FKSVNC+SITKEELVHKIIMN LDI
Sbjct: 301 FLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIMNCLDI 360

Query: 435 TERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAKEDLESVVAKTAPV 482
           TERREVEERIEQLEK VP+WISKKLT SGDVTFSI+ KEDLESVVAKTA +
Sbjct: 361 TERREVEERIEQLEKLVPNWISKKLTISGDVTFSINTKEDLESVVAKTARI 405

BLAST of Carg06660 vs. TrEMBL
Match: tr|A0A2P4JTZ8|A0A2P4JTZ8_QUESU (Hsp-interacting protein OS=Quercus suber OX=58331 GN=CFP56_50757 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.7e-76
Identity = 201/538 (37.36%), Postives = 271/538 (50.37%), Query Frame = 0

Query: 1    MGEKTCEDGSHDVSAIEANPVPFPPHKEGVSGN------VVCMTPEKGDEYSKEKSKEGG 60
            M + TC   S  VS       P P  K G+  N        C TPEK +E S  K KEG 
Sbjct: 717  MDQSTCPGNSTAVS-------PAPVQKLGIIPNQNLELKPACQTPEKTNEPS-HKIKEGE 776

Query: 61   IKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNVSGQVSVMSKRKFLHRHLAQIVYII 120
            ++  +KY++I EFF  +I S RLL + KKL TF N+S QV +++KRKF + HLAQI YI+
Sbjct: 777  VELPDKYKNISEFFDRMICSFRLLILCKKLPTFQNISAQVEILTKRKFTYSHLAQIKYIL 836

Query: 121  PEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHSEHSDFLALHKVFASRVAKFFVMHP 180
            PE + I+K+ +HDKKT CMK +M ISL  D +EGH E SDFLALH++FASR+  FF   P
Sbjct: 837  PEAIQIEKILVHDKKTLCMKPDMKISLLFDVIEGHCEQSDFLALHQLFASRLISFFTKQP 896

Query: 181  EKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEPISVQTELSFEDLYPESTFKRHFSK 240
            +  +VPEA LPEPF+ R  T S +Q   DS  +S+  S++ E   E+  P  +  RHFS+
Sbjct: 897  KACDVPEAILPEPFSERKQTLSAEQLIADSVIESQSTSIECEPLSENFDPYPSISRHFSQ 956

Query: 241  KAVPKTELSEPITSSVVGLPSAPACSLKEEE-------------DKNDNLL--------- 300
            KAV        +  S + L SA + +L  ++              K+D ++         
Sbjct: 957  KAVGAETEKTQLLESPIALLSARSDNLINQDSTSVQQVENSGLGSKSDGVMNPNIKGGQQ 1016

Query: 301  -EDLPVQSI-----SPRATANSSESPVVKPATXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
             E     SI     SP    N   +P+ K A+                            
Sbjct: 1017 KESPSTSSISSTFNSPAQQTNPLSTPLGKLASSDDPLILETPAQLTPKISMPSCEDKLKT 1076

Query: 361  XXXXXXXXLCKPAKRFLNFSGMEGDNGPLSFSVDDLQCYDI------------------- 420
                       PAKRFL+FS +EG+     + VD+  C ++                   
Sbjct: 1077 STSQKLTSCDTPAKRFLDFSHLEGEKAAFDYIVDEPGCNNVVIDNIQHTTEVTFKGVNAT 1136

Query: 421  --------PEKRDFHYERYRKDSSSGRVTCEESSCLPELVRVIYNVFKSVNCASITKEEL 478
                     +   F  E   K ++      + SS LP+LV +IY +FKSVNC +ITKEEL
Sbjct: 1137 GSPPPLQEVKSLGFLDEVCEKSTAGVTAVQQMSSSLPDLVALIYQIFKSVNCCAITKEEL 1196

BLAST of Carg06660 vs. TrEMBL
Match: tr|A0A2P5BXU7|A0A2P5BXU7_9ROSA (DNA replication factor OS=Trema orientalis OX=63057 GN=TorRG33x02_304860 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 2.0e-72
Identity = 189/489 (38.65%), Postives = 267/489 (54.60%), Query Frame = 0

Query: 33  NVVCMTPEKGD--EYSKEKSKEGGIKHQEKYQSIVEFFTCLISSLRLLGMRKKLSTFHNV 92
           NV C TP+K +   ++K     G +K  EKY++IVEF+  +  SL+LLG+ K+L TF NV
Sbjct: 53  NVACQTPQKTNVLSHNKVPVPVGQLKLPEKYKTIVEFYDSMCCSLKLLGLCKRLPTFENV 112

Query: 93  SGQVSVMSKRKFLHRHLAQIVYIIPEVVTIDKVTIHDKKTSCMKSEMIISLRLDTVEGHS 152
           S Q+ V++KR F +RHLAQI YI+PE + I+K+ IHDKKT  MKS+M I+L  DTVEGHS
Sbjct: 113 STQIGVLTKRNFSYRHLAQIKYILPEALQIEKILIHDKKTLSMKSDMKITLLFDTVEGHS 172

Query: 153 EHSDFLALHKVFASRVAKFFVMHPEKSEVPEAALPEPFNRRNITFSLDQSTDDSSEKSEP 212
           E SDF+AL +VF+ R+  F   HPE S+VPEA LPEPF +RN     ++   D   KSEP
Sbjct: 173 EVSDFIALSQVFSLRLYNFCSTHPEASDVPEAVLPEPFIQRNQINIPNKLLSDCYVKSEP 232

Query: 213 ISVQTELSFEDLYPESTFKRHFSKKAVPKTELSEPITSSV----VGLPSAPA-------- 272
             ++ EL  E  YP + F RHFS+ AV + E ++ + S V     GL             
Sbjct: 233 DLIEPELLSEKDYPNAHFSRHFSQNAVVENEKTQDLVSIVHPPLNGLDKQDCKKEQQGES 292

Query: 273 -CSLKEEEDKNDNLLEDLP------------VQSISPRATA--NSSESPVVKPATXXXXX 332
            C   ++ +    + +  P            +Q  SP+++   +++E+P+    +     
Sbjct: 293 NCITSQDTNNGHGMPKKFPGTCCKSVSIHPQLQPDSPQSSVGISTAENPLADLTSGTLMI 352

Query: 333 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCKPAKRFLNFSGMEGDNGPLS------F 392
                                           CKPAKR LNF  +EGD    S       
Sbjct: 353 ETPSQSIPRRLVSSYDVSHKIMSSQSSTPG--CKPAKRVLNFFHVEGDESASSEESADKS 412

Query: 393 SVDDLQCYDIPEKRD-FHYERYRKDSSSG---RVTCEE-----SSCLPELVRVIYNVFKS 452
             D+  C+ I    + F  +     SSS    R  C+      SS L +++ +I+++FKS
Sbjct: 413 KCDENVCHGISHTSEGFSEDGDTLGSSSAPQERQVCDSMCQNISSSLVDMIALIHSIFKS 472

Query: 453 VNCASITKEELVHKIIMNSLDITERREVEERIEQLEKSVPSWISKKLTPSGDVTFSISAK 478
            NC  ITKEELVHKII+N+LDI E+REVEE+I+ LE+ VP WI K+L PSGD+ ++I   
Sbjct: 473 ANCFPITKEELVHKIIINNLDIVEKREVEEQIDLLERLVPDWIYKELAPSGDIMYNIKDV 532

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022954488.11.8e-24298.75CDT1-like protein a, chloroplastic [Cucurbita moschata][more]
XP_023541265.16.6e-22994.18CDT1-like protein a, chloroplastic [Cucurbita pepo subsp. pepo][more]
XP_022994693.13.1e-22691.89CDT1-like protein a, chloroplastic [Cucurbita maxima][more]
XP_022137627.14.7e-15861.59CDT1-like protein a, chloroplastic [Momordica charantia][more]
XP_008437096.12.2e-15262.73PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT2G31270.12.0e-3334.49homolog of yeast CDT1 A[more]
AT3G54710.14.1e-2328.73homolog of yeast CDT1 B homolog of yeast CDT1 B[more]
Match NameE-valueIdentityDescription
sp|Q9SJW9|CDT1A_ARATH3.5e-3234.49CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CDT1A PE=1... [more]
sp|Q9M1S9|CDT1B_ARATH7.4e-2228.73CDT1-like protein b OS=Arabidopsis thaliana OX=3702 GN=CDT1B PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A1S3ATS0|A0A1S3ATS0_CUCME1.5e-15262.73CDT1-like protein a, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A0A0LQM9|A0A0A0LQM9_CUCSA4.2e-14761.40Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G043230 PE=4 SV=1[more]
tr|A0A1S3AT80|A0A1S3AT80_CUCME1.4e-12963.50CDT1-like protein a, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034... [more]
tr|A0A2P4JTZ8|A0A2P4JTZ8_QUESU1.7e-7637.36Hsp-interacting protein OS=Quercus suber OX=58331 GN=CFP56_50757 PE=4 SV=1[more]
tr|A0A2P5BXU7|A0A2P5BXU7_9ROSA2.0e-7238.65DNA replication factor OS=Trema orientalis OX=63057 GN=TorRG33x02_304860 PE=4 SV... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR032054Cdt1_C
IPR014939CDT1_Gemini-bd-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg06660-RACarg06660-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014939CDT1 Geminin-binding domain-likeSMARTSM01075CDT1_2coord: 59..186
e-value: 8.2E-6
score: 35.3
IPR014939CDT1 Geminin-binding domain-likePFAMPF08839CDT1coord: 60..126
e-value: 4.8E-10
score: 39.9
NoneNo IPR availableGENE3DG3DSA:1.10.10.1420coord: 380..480
e-value: 8.3E-9
score: 37.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 281..324
NoneNo IPR availablePANTHERPTHR28637FAMILY NOT NAMEDcoord: 49..477
NoneNo IPR availableCDDcd08674Cdt1_mcoord: 49..202
e-value: 4.00106E-34
score: 125.885
IPR032054DNA replication factor Cdt1, C-terminalPFAMPF16679CDT1_Ccoord: 392..452
e-value: 2.4E-8
score: 34.2
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILYSSF46785"Winged helix" DNA-binding domaincoord: 58..188