CmaCh13G009560 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh13G009560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	CDT1-like protein b
Location	Cma_Chr13 : 7501639 .. 7502932 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACAAACCCCAGAACAGTTGACACCAAAGAAATCAGTGCTGCCGAGTTCGTATGTGAAAACGAGGAAACCCGCAAGCGTGGGAAGATTATGTAAAGCTGCAAAACGGGTTCACGACTTGTCTGCCATGGAAGGCGACAATGGTGCATTGAGGCTCGGCGTGGCTGAAAAGAAAGCTTTTGTTGATGTGAAGAATGTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTTAATTGCGCTTCGATTAACAAGGAAGAGCTCGTGCACAAGATTATGATGAGTAGTCCTGATATTACTGAGAGAAGTATGTATGATTTTGTTAATTTGTTTTGAAATTTTGCTTTACTTGTACTTGTTTCCTTGCAGGTGAAGTGGAAGAGCAAATTGAGCAGCTCCATGAGTTGGTTCCCAATTGGATCTCCAAGAACTTGACACCTAGTGGGGATGTTACTTTTAGGTCAGTCATTCCGAGTATCTTTTATTATCTTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCGAGAGAACTCGGTTGGTACGAAGCTTTTTGAATAAACATAAAAACGAAGTACTTTATGATCAGAGTCGACAATATCATATAATTATCTAGGTTTGTTGTTGTTAACATGTTACTAGAGTCATGTCCTTATCTAACTTAGTCATATCAATAGAATTTTCAAGTGCCTATAGAAGGAGTTGAGTTTCAACTAAGGGGAGACTGTTCGAGGGCTTTAGAGAATCGAGAATCAGGTCTTAGGGAAGGCTCTATATTGTATTTTATTTGAAGGGAGAATGGTTGGAGTCCCACTTTGACAAATTAAGGGAAAAATAGGAGTAAACAAGTAAAGAAACTCGTACGAATTCATTTAAGGAAACCAAAAACGTCTTAACACAAATGTCTGATAGAACATTTTTTTTTTCTTTTTGTTCATCGAAAATAAGGGGTTTGAGTCATCTTTTAAGTCAAAACCTACATTGAACCCATATGTAAACTGAATGTGTGACAAACCGATAACCAAAACGACCAAAACCAAATAAAATAGCCAAAAGAATGACGAAATCTTACTCAAAACCGAACCCACGAACGATTTTGAACTTAGAAAACTTAAACGATGAATGAAGGAGTATATCTTTAAGGAGACATTGGATGACTCCCTCAATGTCTATATAACTAGATGTGACCCCATGAATGCACTTCTTTTAATGCTAACAACACTGTCACTCGGTGCAGCATTGACCCGATGGAAGACTTGGAACCGGTAG

mRNA sequence

ATGACACAAACCCCAGAACAGTTGACACCAAAGAAATCAGTGCTGCCGAGTTCGTATGTGAAAACGAGGAAACCCGCAAGCGTGGGAAGATTATGTAAAGCTGCAAAACGGGTTCACGACTTGTCTGCCATGGAAGGCGACAATGGTGCATTGAGGCTCGGCGTGGCTGAAAAGAAAGCTTTTGTTGATGTGAAGAATGTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTTAATTGCGCTTCGATTAACAAGGAAGAGCTCGTGCACAAGATTATGATGAGTAGTCCTGATATTACTGAGAGAAGTGAAGTGGAAGAGCAAATTGAGCAGCTCCATGAGTTGGTTCCCAATTGGATCTCCAAGAACTTGACACCTAGTGGGGATGTTACTTTTAGGTCAGTCATTCCGACATTGACCCGATGGAAGACTTGGAACCGGTAG

Coding sequence (CDS)

ATGACACAAACCCCAGAACAGTTGACACCAAAGAAATCAGTGCTGCCGAGTTCGTATGTGAAAACGAGGAAACCCGCAAGCGTGGGAAGATTATGTAAAGCTGCAAAACGGGTTCACGACTTGTCTGCCATGGAAGGCGACAATGGTGCATTGAGGCTCGGCGTGGCTGAAAAGAAAGCTTTTGTTGATGTGAAGAATGTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTTAATTGCGCTTCGATTAACAAGGAAGAGCTCGTGCACAAGATTATGATGAGTAGTCCTGATATTACTGAGAGAAGTGAAGTGGAAGAGCAAATTGAGCAGCTCCATGAGTTGGTTCCCAATTGGATCTCCAAGAACTTGACACCTAGTGGGGATGTTACTTTTAGGTCAGTCATTCCGACATTGACCCGATGGAAGACTTGGAACCGGTAG

Protein sequence

MTQTPEQLTPKKSVLPSSYVKTRKPASVGRLCKAAKRVHDLSAMEGDNGALRLGVAEKKAFVDVKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTFRSVIPTLTRWKTWNR

Homology

[Close]

BLAST of CmaCh13G009560 vs. Swiss-Prot
Match: CDT1A_ARATH (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.9e-10
Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 1


Query: 5   PEQLTPKKSVLPSSYVKTRKPASVGRLCKAAKRVHDLSAMEGDNGALRLGVAEKKAFVDV 64
           P    P++ V     + +  P  +    K  +R     A+E  N A+ L    +K    +
Sbjct: 420 PIDQVPEEDVSSDDEILSILPDKLRHAIKEQER----KAIEDQNPAISLAKRRRKMIACL 479

Query: 65  KNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHELVPNWISKNL 124
             +  V++ + +S+    I KEELVHKI+    DIT+R EVEEQ+  L E+VP W+S+  
Sbjct: 480 PKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKK 539

Query: 125 TPSGDV 131
           + SGDV
Sbjct: 540 SSSGDV 541

[Close]

BLAST of CmaCh13G009560 vs. Swiss-Prot
Match: CDT1B_ARATH (CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 29/71 (40.85%), Postives = 48/71 (67.61%), Query Frame = 1


Query: 63  DVKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHELVPNWISK 122
           ++  +V +++ +F S N   I KEEL++KI+ +  +IT+R EVEEQ+  + +LVP+WIS+
Sbjct: 390 NLPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWISE 449

Query: 123 NLTPSGDVTFR 134
               SGD+  R
Sbjct: 450 TKASSGDLLVR 460

[Close]

BLAST of CmaCh13G009560 vs. TrEMBL
Match: A0A0A0LQM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043230 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-36
Identity = 95/161 (59.01%), Postives = 107/161 (66.46%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSVLPSSYVKTRKPASVGRLCKAAKRVHDLSAMEGDNGALRLGV----- 60
           MTQTP QLTPK+S+LPSS VKTRKPASVG +CK AKR  + S ME DNG   LGV     
Sbjct: 295 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQC 354

Query: 61  ---AEKKAFVD---------------------VKNVVRVVYNIFKSVNCASINKEELVHK 120
                KK F+D                     +  +V VVYNIFKSVNC+SI KEELVHK
Sbjct: 355 YEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHK 414

Query: 121 IMMSSPDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTF 133
           I+M+  DITER EVEE+IEQL +LVPNWISK LT SGDVTF
Sbjct: 415 IIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTF 455

[Close]

BLAST of CmaCh13G009560 vs. TrEMBL
Match: V4TSM5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023500mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.9e-13
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 1


Query: 55  VAEKKAFVDVKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHE 114
           V ++   V + N+V  +++IF++VN +SI K+ELVHKI+M++ DI ER EVEEQIE L +
Sbjct: 354 VTDEDISVCLPNLVASIHHIFQTVNYSSITKQELVHKIIMNNLDIIERREVEEQIELLEK 413

Query: 115 LVPNWISKNLTPSGDVTF 133
           LVP WISK L P GD+ +
Sbjct: 414 LVPEWISKKLVPGGDIMY 431

[Close]

BLAST of CmaCh13G009560 vs. TrEMBL
Match: A0A067DX98_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010970mg PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.5e-12
Identity = 40/78 (51.28%), Postives = 58/78 (74.36%), Query Frame = 1


Query: 55  VAEKKAFVDVKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHE 114
           V ++   V + ++V  +++IF++VN +SI K+ELVHKI+M++ DI ER EVEEQIE L +
Sbjct: 401 VIDEDISVCLPDLVASIHHIFQTVNYSSITKQELVHKIIMNNLDIIERREVEEQIELLEK 460

Query: 115 LVPNWISKNLTPSGDVTF 133
           LVP WISK L P GD+ +
Sbjct: 461 LVPEWISKKLVPGGDIMY 478

[Close]

BLAST of CmaCh13G009560 vs. TrEMBL
Match: A0A022Q2S9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006725mg PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.5e-12
Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 1


Query: 3   QTPEQLTPKKSVLPSSYV-----KTRKPASVG--RLCKAAKRVHDLSAMEGDNGALRLGV 62
           +TP Q TP +S+ P+  V     K +K AS          K+  D  +M+ D+  L    
Sbjct: 283 ETPVQSTPMRSISPTRLVLTCEDKNKKTASQNSKHSTSVVKKSLDFYSMDSDHTTLSYN- 342

Query: 63  AEKKAFVDVKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHEL 122
             +++F    ++V +++ IF+SV+  SI KEELV KI+M+S DI +  EVE QI+ L +L
Sbjct: 343 --QQSF-SPSDLVLLIHQIFRSVDFCSITKEELVQKIIMNSFDIDDHGEVETQIQNLEKL 402

Query: 123 VPNWISKNLTPSGDVTF 133
           VP+WI K + PSGD+ +
Sbjct: 403 VPDWIYKKVEPSGDLLY 415

[Close]

BLAST of CmaCh13G009560 vs. TrEMBL
Match: W9RMS0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005411 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.2e-12
Identity = 36/68 (52.94%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 66  NVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHELVPNWISKNLT 125
           ++V ++ +IFKSVNC  I KEELVHKI+M S DI ++ EVE+ I+ L +LVP+WI + L 
Sbjct: 546 DMVSLICSIFKSVNCYPITKEELVHKIIMYSLDIVDKKEVEDHIDLLEQLVPDWIYRKLA 605

Query: 126 PSGDVTFR 134
           PSGD+ ++
Sbjct: 606 PSGDIMYK 613

[Close]

BLAST of CmaCh13G009560 vs. TAIR10
Match: AT2G31270.1 (AT2G31270.1 homolog of yeast CDT1 A)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 1


Query: 5   PEQLTPKKSVLPSSYVKTRKPASVGRLCKAAKRVHDLSAMEGDNGALRLGVAEKKAFVDV 64
           P    P++ V     + +  P  +    K  +R     A+E  N A+ L    +K    +
Sbjct: 420 PIDQVPEEDVSSDDEILSILPDKLRHAIKEQER----KAIEDQNPAISLAKRRRKMIACL 479

Query: 65  KNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHELVPNWISKNL 124
             +  V++ + +S+    I KEELVHKI+    DIT+R EVEEQ+  L E+VP W+S+  
Sbjct: 480 PKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKK 539

Query: 125 TPSGDV 131
           + SGDV
Sbjct: 540 SSSGDV 541

[Close]

BLAST of CmaCh13G009560 vs. TAIR10
Match: AT3G54710.1 (AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B)

HSP 1 Score: 60.8 bits (146), Expect = 7.9e-10
Identity = 29/71 (40.85%), Postives = 48/71 (67.61%), Query Frame = 1


Query: 63  DVKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHELVPNWISK 122
           ++  +V +++ +F S N   I KEEL++KI+ +  +IT+R EVEEQ+  + +LVP+WIS+
Sbjct: 390 NLPQLVNLIHRVFHSTNRTVITKEELLYKIIANQINITDRREVEEQLSLMLQLVPDWISE 449

Query: 123 NLTPSGDVTFR 134
               SGD+  R
Sbjct: 450 TKASSGDLLVR 460

[Close]

BLAST of CmaCh13G009560 vs. NCBI nr
Match: gi|659066993|ref|XP_008437112.1| (PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-37
Identity = 96/158 (60.76%), Postives = 109/158 (68.99%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSVLPSSYVKTRKPASVGRLCKAAKRVHDLSAMEGDNGALRLGVAE--- 60
           MTQTP QLTPK+S+LPSS VKTRKPASVG +CK AKR  + S MEGDNG   LGV +   
Sbjct: 230 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQI 289

Query: 61  --KKAFVD---------------------VKNVVRVVYNIFKSVNCASINKEELVHKIMM 120
             KK F+D                     +  +V VVYNIFKSVNC+SI KEELVHKI+M
Sbjct: 290 PGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIM 349

Query: 121 SSPDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTF 133
           +  DITER EVEE+IEQL +LVPNWISK LT SGDVTF
Sbjct: 350 NCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTF 387

[Close]

BLAST of CmaCh13G009560 vs. NCBI nr
Match: gi|659066989|ref|XP_008437096.1| (PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-37
Identity = 96/158 (60.76%), Postives = 109/158 (68.99%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSVLPSSYVKTRKPASVGRLCKAAKRVHDLSAMEGDNGALRLGVAE--- 60
           MTQTP QLTPK+S+LPSS VKTRKPASVG +CK AKR  + S MEGDNG   LGV +   
Sbjct: 309 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQI 368

Query: 61  --KKAFVD---------------------VKNVVRVVYNIFKSVNCASINKEELVHKIMM 120
             KK F+D                     +  +V VVYNIFKSVNC+SI KEELVHKI+M
Sbjct: 369 PGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIM 428

Query: 121 SSPDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTF 133
           +  DITER EVEE+IEQL +LVPNWISK LT SGDVTF
Sbjct: 429 NCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTF 466

[Close]

BLAST of CmaCh13G009560 vs. NCBI nr
Match: gi|778657537|ref|XP_011651063.1| (PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 6.0e-36
Identity = 95/161 (59.01%), Postives = 107/161 (66.46%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSVLPSSYVKTRKPASVGRLCKAAKRVHDLSAMEGDNGALRLGV----- 60
           MTQTP QLTPK+S+LPSS VKTRKPASVG +CK AKR  + S ME DNG   LGV     
Sbjct: 295 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQC 354

Query: 61  ---AEKKAFVD---------------------VKNVVRVVYNIFKSVNCASINKEELVHK 120
                KK F+D                     +  +V VVYNIFKSVNC+SI KEELVHK
Sbjct: 355 YEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHK 414

Query: 121 IMMSSPDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTF 133
           I+M+  DITER EVEE+IEQL +LVPNWISK LT SGDVTF
Sbjct: 415 IIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTF 455

[Close]

BLAST of CmaCh13G009560 vs. NCBI nr
Match: gi|297737211|emb|CBI26412.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 87.8 bits (216), Expect = 1.7e-14
Identity = 60/151 (39.74%), Postives = 82/151 (54.30%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSVLPSSYVKTRKPA-SVGRLCKA-AKRVHDLSAMEGDNGALRL----- 60
           M +TP QLTPK+S +PS   K +     +G  C    KR  D S +EGD   L       
Sbjct: 281 MVETPAQLTPKRS-MPSCDNKLKTVTRQMGTSCHMPTKRSLDFSCLEGDESVLNTLDEPE 340

Query: 61  ----------GVAEKKAFVD--VKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITE 120
                        E K  V   + ++V +++ IF S+ C SI KEELVHKI+M++ DI E
Sbjct: 341 CHKVIHDTLSQTVEAKGQVSTCLVDLVALIHRIFLSLGCFSITKEELVHKIIMNNCDIIE 400

Query: 121 RSEVEEQIEQLHELVPNWISKNLTPSGDVTF 133
           R E+EEQIE L +L+P WI + L P GD+ +
Sbjct: 401 RREIEEQIELLEKLIPEWIFRKLAPCGDLLY 430

[Close]

BLAST of CmaCh13G009560 vs. NCBI nr
Match: gi|567897964|ref|XP_006441470.1| (hypothetical protein CICLE_v10023500mg [Citrus clementina])

HSP 1 Score: 83.2 bits (204), Expect = 4.2e-13
Identity = 41/78 (52.56%), Postives = 58/78 (74.36%), Query Frame = 1


Query: 55  VAEKKAFVDVKNVVRVVYNIFKSVNCASINKEELVHKIMMSSPDITERSEVEEQIEQLHE 114
           V ++   V + N+V  +++IF++VN +SI K+ELVHKI+M++ DI ER EVEEQIE L +
Sbjct: 354 VTDEDISVCLPNLVASIHHIFQTVNYSSITKQELVHKIIMNNLDIIERREVEEQIELLEK 413

Query: 115 LVPNWISKNLTPSGDVTF 133
           LVP WISK L P GD+ +
Sbjct: 414 LVPEWISKKLVPGGDIMY 431

The following BLAST results are available for this feature:

BLAST of CmaCh13G009560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CDT1A_ARATH	1.9e-10	33.33	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1	[more]
CDT1B_ARATH	1.4e-08	40.85	CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1	[more]

BLAST of CmaCh13G009560 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQM9_CUCSA	4.2e-36	59.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043230 PE=4 SV=1	[more]
V4TSM5_9ROSI	2.9e-13	52.56	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023500mg PE=4 SV=1	[more]
A0A067DX98_CITSI	1.5e-12	51.28	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010970mg PE=4 SV=1	[more]
A0A022Q2S9_ERYGU	5.5e-12	37.96	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006725mg PE=4 SV=1	[more]
W9RMS0_9ROSA	7.2e-12	52.94	Uncharacterized protein OS=Morus notabilis GN=L484_005411 PE=4 SV=1	[more]

BLAST of CmaCh13G009560 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31270.1	1.1e-11	33.33	homolog of yeast CDT1 A	[more]
AT3G54710.1	7.9e-10	40.85	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

BLAST of CmaCh13G009560 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066993\|ref\|XP_008437112.1\|	2.4e-37	60.76	PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo]	[more]
gi\|659066989\|ref\|XP_008437096.1\|	2.4e-37	60.76	PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo]	[more]
gi\|778657537\|ref\|XP_011651063.1\|	6.0e-36	59.01	PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus]	[more]
gi\|297737211\|emb\|CBI26412.3\|	1.7e-14	39.74	unnamed protein product [Vitis vinifera]	[more]
gi\|567897964\|ref\|XP_006441470.1\|	4.2e-13	52.56	hypothetical protein CICLE_v10023500mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G009560.1	CmaCh13G009560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR28637	FAMILY NOT NAMED	coord: 55..130 score: 3.6
None	No IPR available	PANTHER	PTHR28637:SF2	SUBFAMILY NOT NAMED	coord: 55..130 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh13G009560	Cucsa.122360	Cucumber (Gy14) v1	cgycmaB0317
CmaCh13G009560	Cla008373	Watermelon (97103) v1	cmawmB200
CmaCh13G009560	Csa1G043230	Cucumber (Chinese Long) v2	cmacuB217
CmaCh13G009560	MELO3C002178	Melon (DHL92) v3.5.1	cmameB193
CmaCh13G009560	ClCG01G014740	Watermelon (Charleston Gray)	cmawcgB179
CmaCh13G009560	CSPI01G07630	Wild cucumber (PI 183967)	cmacpiB218
CmaCh13G009560	CmoCh18G000810	Cucurbita moschata (Rifu)	cmacmoB224
CmaCh13G009560	CmoCh13G009910	Cucurbita moschata (Rifu)	cmacmoB218
CmaCh13G009560	Lsi02G002810	Bottle gourd (USVL1VR-Ls)	cmalsiB208
CmaCh13G009560	Cp4.1LG09g10810	Cucurbita pepo (Zucchini)	cmacpeB213
CmaCh13G009560	MELO3C002178.2	Melon (DHL92) v3.6.1	cmamedB214
CmaCh13G009560	CsaV3_1G007580	Cucumber (Chinese Long) v3	cmacucB0248
CmaCh13G009560	Cla97C01G013750	Watermelon (97103) v2	cmawmbB207
CmaCh13G009560	Bhi08G001124	Wax gourd	cmawgoB0266
CmaCh13G009560	CsGy1G007480	Cucumber (Gy14) v2	cgybcmaB073
CmaCh13G009560	Carg06660	Silver-seed gourd	carcmaB0690
CmaCh13G009560	Carg04879	Silver-seed gourd	carcmaB0540

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh13G009560	CmaCh18G001050	Cucurbita maxima (Rimu)	cmacmaB217

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh13G009560	Cucurbita pepo (Zucchini)	cmacpeB234