CmoCh13G009910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh13G009910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	CDT1-like protein b
Location	Cmo_Chr13 : 8486865 .. 8488228 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACACAAACCCCAGAACAGTTGACACCAAAGAAATCAATGCTGCCGAGTTCGTACGTGAAAACGAGGAAACCCGCAAATGTGGGAAGATTATGTAAAGCTGCAAAACGGGTTCACGACTTGTCTGCCATGGAAGGCGACAATGGTGCATTGAGGCTCGGCGTGGCTGAAAAGAAAGCTTCTGTTGATGTGAAGAATGTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTTAATTGCGCTTCGATTAACAAGGAAGAACTCGTGCACGAGATTATGATGAGTAGTCTTGATATTACTGAGAGAAGTATGTATGATTTTGTCAATTTGATTTGAAATTTTGCTTTACTTAGACTTGTTTCCTTGCAGGTGAAGTGGAAGAGCAAATTGAGCAGCTCCATGAGTTGGTTCCCAATTGGATCTCCAAGAACTTGACACCTAGTGGGGATGTTACTTTTAGGTCAGTCATTCCAATATCTTTTATTATCTTTTTATTTTTATATTTATATAAATATATACATATATCGTGAGAACTCCGTTGGTACGAAGTTTTTTTGAAGAAACATAAAAACGAAGCACTTTATGATCAAAGTGGACAATATCATATAATTGTTGAGGTTTGTTGTTGTTAACATGGTACTAGAGTCATGTTCTTATCTAACTTAGTCATATCAATAGAATTCTCAAGTGTCGAATAAAAAAGTTGTGAGTCTCGAGAGTGTAACTTTAATGACTTAGGTGTTGAATAGAAATGGTACTTTGTTTGAAGGCTTCAGAGAAGGAGTTGAGTCTCAATTAAGGGGAGACTTCGAGGGCTTTAGAGAATCGAGAATTAGGTCTTAGGGAAGGCTCTATAATGTATTTTATTTGAAGGGAGAACTATTGGAGTCCCACATTGACAAATTGAGGGAAAGACAGGAGTAAATAAGTAAAGAAACTCGGTACGAAGTCATTTAGTTTTGTTCATCGAAACTAAGGGGATTGAGTCTCTTTTAAGTCAAACCTACATGGAACCCATATGCAAACTGAATGCGTGAGAAACCGATAACCAAATCGAGTCGGCAAAAGAATACACAATCTTATTCAACCGAACCCATGAACTACTTTTTTCGATTTTGAACCTAGAAAACTTAAACGATTAATGAACGAGTATAGCTTTAAGGAGACATTGGATGAATCCCTCAATGTCTATATTAACTAGATGTGACCCCCATGAATGCACGTCTATACATGCTAATAACACTGTCACTCGGTGCAGCATCGACTCGATGGAAGACTTGGAATCGGTAGTGGCAAGGACTGCTCGCATTTGAGAAGCTGTCAAAGGTCACCACATCGTCTTGCTTGTTAGATTACATCTGTAG

mRNA sequence

ATGACACAAACCCCAGAACAGTTGACACCAAAGAAATCAATGCTGCCGAGTTCGTACGTGAAAACGAGGAAACCCGCAAATGTGGGAAGATTATGTAAAGCTGCAAAACGGGTTCACGACTTGTCTGCCATGGAAGGCGACAATGGTGCATTGAGGCTCGGCGTGGCTGAAAAGAAAGCTTCTGTTGATGTGAAGAATGTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTTAATTGCGCTTCGATTAACAAGGAAGAACTCGTGCACGAGATTATGATGAGTAGTCTTGATATTACTGAGAGAAGTGAAGTGGAAGAGCAAATTGAGCAGCTCCATGAGTTGGTTCCCAATTGGATCTCCAAGAACTTGACACCTAGTGGGGATGTTACTTTTAGATTACATCTGTAG

Coding sequence (CDS)

ATGACACAAACCCCAGAACAGTTGACACCAAAGAAATCAATGCTGCCGAGTTCGTACGTGAAAACGAGGAAACCCGCAAATGTGGGAAGATTATGTAAAGCTGCAAAACGGGTTCACGACTTGTCTGCCATGGAAGGCGACAATGGTGCATTGAGGCTCGGCGTGGCTGAAAAGAAAGCTTCTGTTGATGTGAAGAATGTTGTTCGTGTTGTCTACAACATTTTCAAGTCTGTTAATTGCGCTTCGATTAACAAGGAAGAACTCGTGCACGAGATTATGATGAGTAGTCTTGATATTACTGAGAGAAGTGAAGTGGAAGAGCAAATTGAGCAGCTCCATGAGTTGGTTCCCAATTGGATCTCCAAGAACTTGACACCTAGTGGGGATGTTACTTTTAGATTACATCTGTAG

Homology

[Close]

BLAST of CmoCh13G009910 vs. Swiss-Prot
Match: CDT1A_ARATH (CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.1e-10
Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 1


Query: 35  AKRVHDLSAMEGDNGALRLGVAEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHEIMM 94
           A +  +  A+E  N A+ L    +K    +  +  V++ + +S+    I KEELVH+I+ 
Sbjct: 446 AIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIA 505

Query: 95  SSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDV 131
              DIT+R EVEEQ+  L E+VP W+S+  + SGDV
Sbjct: 506 GHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDV 541

[Close]

BLAST of CmoCh13G009910 vs. Swiss-Prot
Match: CDT1B_ARATH (CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-09
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 1


Query: 42  SAMEGDNGA-----LRLGVAEKKASVDVKNV---VRVVYNIFKSVNCASINKEELVHEIM 101
           S  EGDN +     L+  +   K   +  N+   V +++ +F S N   I KEEL+++I+
Sbjct: 361 SNYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKII 420

Query: 102 MSSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTFRLH 136
            + ++IT+R EVEEQ+  + +LVP+WIS+    SGD+  R++
Sbjct: 421 ANQINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVRIN 462

[Close]

BLAST of CmoCh13G009910 vs. TrEMBL
Match: A0A0A0LQM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043230 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.9e-36
Identity = 92/164 (56.10%), Postives = 109/164 (66.46%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSMLPSSYVKTRKPANVGRLCKAAKRVHDLSAMEGDNGALRLGV----- 60
           MTQTP QLTPK+SMLPSS VKTRKPA+VG +CK AKR  + S ME DNG   LGV     
Sbjct: 295 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQC 354

Query: 61  ------------------------AEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHE 120
                                     +++S  +  +V VVYNIFKSVNC+SI KEELVH+
Sbjct: 355 YEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHK 414

Query: 121 IMMSSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTFRLH 136
           I+M+ LDITER EVEE+IEQL +LVPNWISK LT SGDVTF ++
Sbjct: 415 IIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSIN 458

[Close]

BLAST of CmoCh13G009910 vs. TrEMBL
Match: V4TSM5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023500mg PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-14
Identity = 42/81 (51.85%), Postives = 62/81 (76.54%), Query Frame = 1


Query: 55  VAEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHEIMMSSLDITERSEVEEQIEQLHE 114
           V ++  SV + N+V  +++IF++VN +SI K+ELVH+I+M++LDI ER EVEEQIE L +
Sbjct: 354 VTDEDISVCLPNLVASIHHIFQTVNYSSITKQELVHKIIMNNLDIIERREVEEQIELLEK 413

Query: 115 LVPNWISKNLTPSGDVTFRLH 136
           LVP WISK L P GD+ + ++
Sbjct: 414 LVPEWISKKLVPGGDIMYDIN 434

[Close]

BLAST of CmoCh13G009910 vs. TrEMBL
Match: A0A067DX98_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010970mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.3e-14
Identity = 41/81 (50.62%), Postives = 62/81 (76.54%), Query Frame = 1


Query: 55  VAEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHEIMMSSLDITERSEVEEQIEQLHE 114
           V ++  SV + ++V  +++IF++VN +SI K+ELVH+I+M++LDI ER EVEEQIE L +
Sbjct: 401 VIDEDISVCLPDLVASIHHIFQTVNYSSITKQELVHKIIMNNLDIIERREVEEQIELLEK 460

Query: 115 LVPNWISKNLTPSGDVTFRLH 136
           LVP WISK L P GD+ + ++
Sbjct: 461 LVPEWISKKLVPGGDIMYDIN 481

[Close]

BLAST of CmoCh13G009910 vs. TrEMBL
Match: A0A067LBH1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17428 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-13
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 1


Query: 1   MTQTPEQLTPKKS--MLPSSYVKTRKPANVGRLCKAAKRVHDLSAMEGDNGA-------- 60
           M +TP Q TPK++  +   ++            C AAKR  D S +EG+  A        
Sbjct: 373 MVETPAQSTPKRATPLSDDNHKSVASQKQASSSCTAAKRSLDFSLLEGNESACCEFLPDN 432

Query: 61  -------------------------LRLGVAE---KKASVDVKNVVRVVYNIFKSVNCAS 120
                                    L++  ++   ++ SV +  +V +++ IF+SVN ++
Sbjct: 433 ISQTVDGSSAILQKVDESFGCDTEELKMSPSDFLHQQISVYLPRLVSLIHRIFQSVNYST 492

Query: 121 INKEELVHEIMMSSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTF 133
           I KEELVH+I+++S D  ER +VEEQIE L +LVP+WI   L PSGDV +
Sbjct: 493 ITKEELVHKIIVNSFDFDERRQVEEQIEILEKLVPDWICMKLAPSGDVLY 542

[Close]

BLAST of CmoCh13G009910 vs. TrEMBL
Match: A0A022Q2S9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006725mg PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-12
Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 1


Query: 3   QTPEQLTPKKSMLPSSYV-----KTRKPA--NVGRLCKAAKRVHDLSAMEGDNGALRLGV 62
           +TP Q TP +S+ P+  V     K +K A  N        K+  D  +M+ D+  L    
Sbjct: 283 ETPVQSTPMRSISPTRLVLTCEDKNKKTASQNSKHSTSVVKKSLDFYSMDSDHTTL---- 342

Query: 63  AEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHEIMMSSLDITERSEVEEQIEQLHEL 122
           +  + S    ++V +++ IF+SV+  SI KEELV +I+M+S DI +  EVE QI+ L +L
Sbjct: 343 SYNQQSFSPSDLVLLIHQIFRSVDFCSITKEELVQKIIMNSFDIDDHGEVETQIQNLEKL 402

Query: 123 VPNWISKNLTPSGDVTFRL 135
           VP+WI K + PSGD+ + +
Sbjct: 403 VPDWIYKKVEPSGDLLYNV 417

[Close]

BLAST of CmoCh13G009910 vs. TAIR10
Match: AT2G31270.1 (AT2G31270.1 homolog of yeast CDT1 A)

HSP 1 Score: 66.2 bits (160), Expect = 1.7e-11
Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = 1


Query: 35  AKRVHDLSAMEGDNGALRLGVAEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHEIMM 94
           A +  +  A+E  N A+ L    +K    +  +  V++ + +S+    I KEELVH+I+ 
Sbjct: 446 AIKEQERKAIEDQNPAISLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIA 505

Query: 95  SSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDV 131
              DIT+R EVEEQ+  L E+VP W+S+  + SGDV
Sbjct: 506 GHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDV 541

[Close]

BLAST of CmoCh13G009910 vs. TAIR10
Match: AT3G54710.1 (AT3G54710.1 homolog of yeast CDT1 B homolog of yeast CDT1 B)

HSP 1 Score: 63.5 bits (153), Expect = 1.1e-10
Identity = 36/102 (35.29%), Postives = 61/102 (59.80%), Query Frame = 1


Query: 42  SAMEGDNGA-----LRLGVAEKKASVDVKNV---VRVVYNIFKSVNCASINKEELVHEIM 101
           S  EGDN +     L+  +   K   +  N+   V +++ +F S N   I KEEL+++I+
Sbjct: 361 SNYEGDNASDDDSLLQSMIERPKTEPEKHNLPQLVNLIHRVFHSTNRTVITKEELLYKII 420

Query: 102 MSSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTFRLH 136
            + ++IT+R EVEEQ+  + +LVP+WIS+    SGD+  R++
Sbjct: 421 ANQINITDRREVEEQLSLMLQLVPDWISETKASSGDLLVRIN 462

[Close]

BLAST of CmoCh13G009910 vs. NCBI nr
Match: gi|659066993|ref|XP_008437112.1| (PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 3.9e-37
Identity = 95/161 (59.01%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSMLPSSYVKTRKPANVGRLCKAAKRVHDLSAMEGDNGALRLGVAE--- 60
           MTQTP QLTPK+SMLPSS VKTRKPA+VG +CK AKR  + S MEGDNG   LGV +   
Sbjct: 230 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQI 289

Query: 61  --KKASVD---------------------VKNVVRVVYNIFKSVNCASINKEELVHEIMM 120
             KK  +D                     +  +V VVYNIFKSVNC+SI KEELVH+I+M
Sbjct: 290 PGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIM 349

Query: 121 SSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTFRLH 136
           + LDITER EVEE+IEQL +LVPNWISK LT SGDVTF ++
Sbjct: 350 NCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSIN 390

[Close]

BLAST of CmoCh13G009910 vs. NCBI nr
Match: gi|659066989|ref|XP_008437096.1| (PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 162.9 bits (411), Expect = 3.9e-37
Identity = 95/161 (59.01%), Postives = 111/161 (68.94%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSMLPSSYVKTRKPANVGRLCKAAKRVHDLSAMEGDNGALRLGVAE--- 60
           MTQTP QLTPK+SMLPSS VKTRKPA+VG +CK AKR  + S MEGDNG   LGV +   
Sbjct: 309 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMEGDNGKSSLGVDDLQI 368

Query: 61  --KKASVD---------------------VKNVVRVVYNIFKSVNCASINKEELVHEIMM 120
             KK  +D                     +  +V VVYNIFKSVNC+SI KEELVH+I+M
Sbjct: 369 PGKKNFLDEHFEKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHKIIM 428

Query: 121 SSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTFRLH 136
           + LDITER EVEE+IEQL +LVPNWISK LT SGDVTF ++
Sbjct: 429 NCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSIN 469

[Close]

BLAST of CmoCh13G009910 vs. NCBI nr
Match: gi|778657537|ref|XP_011651063.1| (PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-36
Identity = 92/164 (56.10%), Postives = 109/164 (66.46%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSMLPSSYVKTRKPANVGRLCKAAKRVHDLSAMEGDNGALRLGV----- 60
           MTQTP QLTPK+SMLPSS VKTRKPA+VG +CK AKR  + S ME DNG   LGV     
Sbjct: 295 MTQTPVQLTPKRSMLPSSEVKTRKPASVGSVCKPAKRFLNFSGMESDNGKSSLGVDGLQC 354

Query: 61  ------------------------AEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHE 120
                                     +++S  +  +V VVYNIFKSVNC+SI KEELVH+
Sbjct: 355 YEIPGKKNFLDEHIQKKNYTSKEVISQESSSCLPELVCVVYNIFKSVNCSSITKEELVHK 414

Query: 121 IMMSSLDITERSEVEEQIEQLHELVPNWISKNLTPSGDVTFRLH 136
           I+M+ LDITER EVEE+IEQL +LVPNWISK LT SGDVTF ++
Sbjct: 415 IIMNCLDITERREVEERIEQLEKLVPNWISKKLTISGDVTFSIN 458

[Close]

BLAST of CmoCh13G009910 vs. NCBI nr
Match: gi|297737211|emb|CBI26412.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 89.7 bits (221), Expect = 4.2e-15
Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 1


Query: 1   MTQTPEQLTPKKSMLPSSYVKTRKPANVGRLCKA-AKRVHDLSAMEGDNGAL-------- 60
           M +TP QLTPK+SM             +G  C    KR  D S +EGD   L        
Sbjct: 281 MVETPAQLTPKRSMPSCDNKLKTVTRQMGTSCHMPTKRSLDFSCLEGDESVLNTLDEPEC 340

Query: 61  ---------RLGVAEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHEIMMSSLDITER 120
                    +   A+ + S  + ++V +++ IF S+ C SI KEELVH+I+M++ DI ER
Sbjct: 341 HKVIHDTLSQTVEAKGQVSTCLVDLVALIHRIFLSLGCFSITKEELVHKIIMNNCDIIER 400

Query: 121 SEVEEQIEQLHELVPNWISKNLTPSGDVTFRL 135
            E+EEQIE L +L+P WI + L P GD+ + +
Sbjct: 401 REIEEQIELLEKLIPEWIFRKLAPCGDLLYSI 432

[Close]

BLAST of CmoCh13G009910 vs. NCBI nr
Match: gi|567897964|ref|XP_006441470.1| (hypothetical protein CICLE_v10023500mg [Citrus clementina])

HSP 1 Score: 87.0 bits (214), Expect = 2.7e-14
Identity = 42/81 (51.85%), Postives = 62/81 (76.54%), Query Frame = 1


Query: 55  VAEKKASVDVKNVVRVVYNIFKSVNCASINKEELVHEIMMSSLDITERSEVEEQIEQLHE 114
           V ++  SV + N+V  +++IF++VN +SI K+ELVH+I+M++LDI ER EVEEQIE L +
Sbjct: 354 VTDEDISVCLPNLVASIHHIFQTVNYSSITKQELVHKIIMNNLDIIERREVEEQIELLEK 413

Query: 115 LVPNWISKNLTPSGDVTFRLH 136
           LVP WISK L P GD+ + ++
Sbjct: 414 LVPEWISKKLVPGGDIMYDIN 434

The following BLAST results are available for this feature:

BLAST of CmoCh13G009910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CDT1A_ARATH	3.1e-10	37.50	CDT1-like protein a, chloroplastic OS=Arabidopsis thaliana GN=CDT1A PE=1 SV=1	[more]
CDT1B_ARATH	2.0e-09	35.29	CDT1-like protein b OS=Arabidopsis thaliana GN=CDT1B PE=1 SV=1	[more]

BLAST of CmoCh13G009910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQM9_CUCSA	3.9e-36	56.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043230 PE=4 SV=1	[more]
V4TSM5_9ROSI	1.9e-14	51.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023500mg PE=4 SV=1	[more]
A0A067DX98_CITSI	9.3e-14	50.62	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010970mg PE=4 SV=1	[more]
A0A067LBH1_JATCU	4.6e-13	32.94	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17428 PE=4 SV=1	[more]
A0A022Q2S9_ERYGU	1.3e-12	36.69	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a006725mg PE=4 SV=1	[more]

BLAST of CmoCh13G009910 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G31270.1	1.7e-11	37.50	homolog of yeast CDT1 A	[more]
AT3G54710.1	1.1e-10	35.29	homolog of yeast CDT1 B homolog of yeast CDT1 B	[more]

BLAST of CmoCh13G009910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066993\|ref\|XP_008437112.1\|	3.9e-37	59.01	PREDICTED: CDT1-like protein a, chloroplastic isoform X2 [Cucumis melo]	[more]
gi\|659066989\|ref\|XP_008437096.1\|	3.9e-37	59.01	PREDICTED: CDT1-like protein a, chloroplastic isoform X1 [Cucumis melo]	[more]
gi\|778657537\|ref\|XP_011651063.1\|	5.6e-36	56.10	PREDICTED: CDT1-like protein a, chloroplastic [Cucumis sativus]	[more]
gi\|297737211\|emb\|CBI26412.3\|	4.2e-15	36.84	unnamed protein product [Vitis vinifera]	[more]
gi\|567897964\|ref\|XP_006441470.1\|	2.7e-14	51.85	hypothetical protein CICLE_v10023500mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh13G009910.1	CmoCh13G009910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR28637	FAMILY NOT NAMED	coord: 55..130 score: 2.9
None	No IPR available	PANTHER	PTHR28637:SF2	SUBFAMILY NOT NAMED	coord: 55..130 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh13G009910	Cucsa.122360	Cucumber (Gy14) v1	cgycmoB0314
CmoCh13G009910	CmaCh13G009560	Cucurbita maxima (Rimu)	cmacmoB218
CmoCh13G009910	CmaCh18G001050	Cucurbita maxima (Rimu)	cmacmoB399
CmoCh13G009910	Cla008373	Watermelon (97103) v1	cmowmB187
CmoCh13G009910	Csa1G043230	Cucumber (Chinese Long) v2	cmocuB202
CmoCh13G009910	MELO3C002178	Melon (DHL92) v3.5.1	cmomeB180
CmoCh13G009910	ClCG01G014740	Watermelon (Charleston Gray)	cmowcgB170
CmoCh13G009910	CSPI01G07630	Wild cucumber (PI 183967)	cmocpiB204
CmoCh13G009910	Lsi02G002810	Bottle gourd (USVL1VR-Ls)	cmolsiB198
CmoCh13G009910	Cp4.1LG09g10810	Cucurbita pepo (Zucchini)	cmocpeB183
CmoCh13G009910	MELO3C002178.2	Melon (DHL92) v3.6.1	cmomedB202
CmoCh13G009910	CsaV3_1G007580	Cucumber (Chinese Long) v3	cmocucB0234
CmoCh13G009910	Cla97C01G013750	Watermelon (97103) v2	cmowmbB191
CmoCh13G009910	Bhi08G001124	Wax gourd	cmowgoB0258
CmoCh13G009910	CsGy1G007480	Cucumber (Gy14) v2	cgybcmoB067
CmoCh13G009910	Carg06660	Silver-seed gourd	carcmoB0671
CmoCh13G009910	Carg04879	Silver-seed gourd	carcmoB0526

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh13G009910	CmoCh18G000810	Cucurbita moschata (Rifu)	cmocmoB171

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh13G009910	Cucurbita pepo (Zucchini)	cmocpeB201