Csa1G000640 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G000640
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRubredoxin; contains IPR004039 (Rubredoxin-type fold)
LocationChr1 : 97221 .. 98905 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGAAAAAGGGAAGACGAATTTGTTGGTGGTCGAAAATGGTAATGGATGGCAGTGTAAGTTTGAAGATAGATAGGATTGATTGTCAGCCACTCAGTTTACATTCACTATTCACTATTCTTTCATTCACCCATTCTCTCTGAGTTTCTGCTGCTCCTACACATCCTTCTCTCTCTGCTTTACTCCCCTTCAATGGCTTCCATTTCAGCTTCTTCTCTCAGTTTCCACCTTCCACCGAAGCCACATTACAAGCTTAACCAGGTTTTTCCCTTCACATTCTTCCACTTTCATTGCATTGCTCCTGTTCTACTTCCCGATCCTTTATTTATATGTATTTGTTTGTTATCAATCAATTATAATTGACTATCATTTATTTAAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTCTGCCTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTATCACTCCTTATCTCTCCTTCCTTTCTGCATTTACATTTTCCTTTTTCTAGATCCCTGTAAACCTCTCTGTTCGACCAATATGTAGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGGTAATTTGCTTCCCTCTTCTCAGGCTTGGACTATATGCACCAGTGTTTTTATAATTTCTTGTTTGTAATTCCATTCATGAATCATCCCACCTTCTTTCCAAACTTAATTTCGTACAATTCTCAAGTCTACCACTTCAAACCAGTTTCTCGAATTCTCTTCTCAATCTGACCAATTAGTTTACTGTTGACGTGGGTCGCCTTTATTTTTAACATGATTAAGTTCCTGCTATTATTTTAAACGGGAGTTTAAATAACACAACTTCTAGAAACCAACTTCAAACCACTTACATTCTGCTCCAACTCAACAAAGAAACTGAAATCTAATATTGTGCCTTGGCAGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGGGTAAGACGGAAAATCAAATCACTATCTTTATAAATGATCATATATTTTAATGATTGTTTATTCAGTCCGATTGATATCACGTTCAACGGTATAGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGCCTTCTAGATCGAGTGGCTTGCTCAATGACGGGGGATTAACACCATCATTTGTTTCACCATTTTCTTCTCGGGGCTGTTCTACGTTGATTTAGATATTATATGTATTTTTTTCCTTCCACTATCCAAAAACCCTGGCAAATTGTTTGAGCATTGCAGTATTATATATATATATATATTCAATTGTCTATTGATTATGTGTATTTGCACTCATTGGAATGGTCGGGTGCGTTGTACTAAATTGTAGGAAAATTCAAGCTCACCTACTGTTGGAAAGCTGGTTGTGTAAAACTGCTGTAGTTGCAGAACCAGGAAATGTGCTTTTAAGGATGGTCAGCGAGG

mRNA sequence

ATGGCTTCCATTTCAGCTTCTTCTCTCAGTTTCCACCTTCCACCGAAGCCACATTACAAGCTTAACCAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTCTGCCTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGCCTTCTAG

Coding sequence (CDS)

ATGGCTTCCATTTCAGCTTCTTCTCTCAGTTTCCACCTTCCACCGAAGCCACATTACAAGCTTAACCAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTCTGCCTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGCCTTCTAG

Protein sequence

MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF*
Homology
[Close]
BLAST of Csa1G000640 vs. Swiss-Prot
Match: RUBR1_DESDA (Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=rd1 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 5.8e-06
Identity = 22/43 (51.16%), Postives = 25/43 (58.14%), Query Frame = 1 

Query: 80  QAYICRDCGYIYN----DRTPFDKLPDKYFCPVCGAPKRRFRP 119
           Q Y+C  CGY Y+    D  PFD+LPD + CPVCG  K +F P
Sbjct: 2   QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQFSP 44

[Close]
BLAST of Csa1G000640 vs. TrEMBL
Match: A0A0A0LNF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000640 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.2e-92
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1 

Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK
Sbjct: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF 173
           QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
Sbjct: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF 172

[Close]
BLAST of Csa1G000640 vs. TrEMBL
Match: E5GBM0_CUCME (Electron transporter OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 9.2e-91
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 1 

Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+
Sbjct: 1   MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRR 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF 173
           QTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Sbjct: 121 QTVNKNDNEFDLRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF 172

[Close]
BLAST of Csa1G000640 vs. TrEMBL
Match: E6NU05_JATCU (JHL07K02.5 protein OS=Jatropha curcas GN=JHL07K02.5 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.5e-48
Identity = 95/141 (67.38%), Postives = 116/141 (82.27%), Query Frame = 1 

Query: 35  LDSASNRLSLKSSFISPLRKIPSLRKQNSV---VAAASPKFSMRVASKQAYICRDCGYIY 94
           L + S+R +LKSSF SP   + SL   N +   +A+++P++SMRVASKQAYICRDCGYIY
Sbjct: 28  LRAPSDRFALKSSFFSPSLYLLSLANSNQLQQPLASSAPRYSMRVASKQAYICRDCGYIY 87

Query: 95  NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLP 154
           N+RTPF+KLPDKYFCPVCGAPKRRF+PY  TV+KNDN+ DVRKARKAQ+Q+DEAIG+ LP
Sbjct: 88  NERTPFEKLPDKYFCPVCGAPKRRFKPYAPTVTKNDNQTDVRKARKAQLQRDEAIGRALP 147

Query: 155 IAAALGIVALVGLYLYLNSAF 173
           I  A+G VAL GLY YLN +F
Sbjct: 148 IGIAVGAVALAGLYFYLNGSF 168

[Close]
BLAST of Csa1G000640 vs. TrEMBL
Match: B9RA53_RICCO (Electron transporter, putative OS=Ricinus communis GN=RCOM_1503210 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 5.6e-48
Identity = 94/133 (70.68%), Postives = 111/133 (83.46%), Query Frame = 1 

Query: 40  NRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDK 99
           +R +LKSSF SP   +     Q+  +AAA+P+FSMRVASKQAYICRDCGYIYN+RTPF+K
Sbjct: 36  DRFALKSSFFSPSLHLLLPSNQHRPLAAAAPRFSMRVASKQAYICRDCGYIYNERTPFEK 95

Query: 100 LPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIV 159
           LPDKYFCPVCGAPKRRFR Y  TV+KNDN+ D RKARKAQIQ+DEAIG+ LPIA  +G+V
Sbjct: 96  LPDKYFCPVCGAPKRRFRQYTPTVNKNDNQTDTRKARKAQIQRDEAIGRALPIAIVVGVV 155

Query: 160 ALVGLYLYLNSAF 173
           AL GLY YL+S+F
Sbjct: 156 ALAGLYFYLSSSF 168

[Close]
BLAST of Csa1G000640 vs. TrEMBL
Match: A0A022Q3G4_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015294mg PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-45
Identity = 94/136 (69.12%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 35  LDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDR 94
           L  +S+R +LKSSF SP   +  +  Q S + A +PKFSMRVASKQAYICRDCGYIYNDR
Sbjct: 26  LRQSSDRFALKSSFFSPSLNL-LMPSQVSTLPATAPKFSMRVASKQAYICRDCGYIYNDR 85

Query: 95  TPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAA 154
           TPFDK PD YFCPVCGAPKRRFR YE  VSK+ N+  VRKARK QI+KDEAIGK LP A 
Sbjct: 86  TPFDKKPDNYFCPVCGAPKRRFRAYEPPVSKDANDLSVRKARKEQIKKDEAIGKALPFAI 145

Query: 155 ALGIVALVGLYLYLNS 171
           ALG+ ALVGLY Y+N+
Sbjct: 146 ALGVAALVGLYFYINT 160

[Close]
BLAST of Csa1G000640 vs. TAIR10
Match: AT5G51010.1 (AT5G51010.1 Rubredoxin-like superfamily protein)

HSP 1 Score: 176.0 bits (445), Expect = 2.0e-44
Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 1 

Query: 9   LSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAA 68
           ++  LPP   Y          R+S+ L   +  L  +SSF+ P   +  L  + S+  ++
Sbjct: 1   MAMQLPPTTLY--------AGRSSVVLPPTTPTLQ-RSSFL-PYYSMRLLGNKKSLSKSS 60

Query: 69  SPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDN 128
           +P+FSMRV+SKQAYICRDCGYIYNDRTPFDKLPD YFCPVC APKRRFR Y   VSKN N
Sbjct: 61  APRFSMRVSSKQAYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRAYMPDVSKNVN 120

Query: 129 EFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS 171
           + DVRKARKA++Q+DEA+GK LPI  A+G++AL  LY Y+NS
Sbjct: 121 DKDVRKARKAELQRDEAVGKALPIGIAVGVLALAALYFYVNS 152

[Close]
BLAST of Csa1G000640 vs. TAIR10
Match: AT5G17170.1 (AT5G17170.1 rubredoxin family protein)

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 25/62 (40.32%), Postives = 33/62 (53.23%), Query Frame = 1 

Query: 68  ASPKFSMRVA----SKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTV 126
           A P+F  ++     ++  +IC DCG+IY     FD+ PD Y CP C APK+RF  Y+   
Sbjct: 179 APPRFGRKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKYDVNT 238

[Close]
BLAST of Csa1G000640 vs. NCBI nr
Match: gi|449440502|ref|XP_004138023.1| (PREDICTED: uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 3.1e-92
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 1 

Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK
Sbjct: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF 173
           QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF
Sbjct: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF 172

[Close]
BLAST of Csa1G000640 vs. NCBI nr
Match: gi|659128800|ref|XP_008464376.1| (PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 1.3e-90
Identity = 167/172 (97.09%), Postives = 171/172 (99.42%), Query Frame = 1 

Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+
Sbjct: 1   MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRR 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF 173
           QTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Sbjct: 121 QTVNKNDNEFDLRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF 172

[Close]
BLAST of Csa1G000640 vs. NCBI nr
Match: gi|778655218|ref|XP_011649175.1| (PREDICTED: uncharacterized protein LOC101207574 isoform X2 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 1 

Query: 33  MFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYN 92
           MFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYN
Sbjct: 1   MFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYN 60

Query: 93  DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI 152
           DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI
Sbjct: 61  DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI 120

Query: 153 AAALGIVALVGLYLYLNSAF 173
           AAALGIVALVGLYLYLNSAF
Sbjct: 121 AAALGIVALVGLYLYLNSAF 140

[Close]
BLAST of Csa1G000640 vs. NCBI nr
Match: gi|659128802|ref|XP_008464377.1| (PREDICTED: uncharacterized protein LOC103502280 isoform X2 [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 4.0e-71
Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 1 

Query: 33  MFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYN 92
           MFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYN
Sbjct: 1   MFLDSASNRLSLKSSFISPLRKIPSLRRQNSVVAAASPKFSMRVASKQAYICRDCGYIYN 60

Query: 93  DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI 152
           DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPI
Sbjct: 61  DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVNKNDNEFDLRKARKAQIQKDEAIGKVLPI 120

Query: 153 AAALGIVALVGLYLYLNSAF 173
           AAALGIVALVGLYLYLNS F
Sbjct: 121 AAALGIVALVGLYLYLNSVF 140

[Close]
BLAST of Csa1G000640 vs. NCBI nr
Match: gi|719978727|ref|XP_010249256.1| (PREDICTED: uncharacterized protein LOC104591875 [Nelumbo nucifera])

HSP 1 Score: 200.3 bits (508), Expect = 2.8e-48
Identity = 103/172 (59.88%), Postives = 121/172 (70.35%), Query Frame = 1 

Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           + +++AS  S  L P  H  L +               S+R +LKSSF SP   +     
Sbjct: 9   LKTVAASPSSSPLSPSAHVGLRRP--------------SHRFALKSSFFSPSLHLLFSPP 68

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           Q  + +AA+P+FSMRVASKQAYICRDCGYIYNDRTPF+KLPDKYFCPVCGAPKRRFR YE
Sbjct: 69  QQPLSSAAAPRFSMRVASKQAYICRDCGYIYNDRTPFEKLPDKYFCPVCGAPKRRFRTYE 128

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSAF 173
             V+KN N+ DVRKARKAQIQ DEAIG+ LPIA  +GI AL GLY YLN+AF
Sbjct: 129 PAVTKNANDTDVRKARKAQIQSDEAIGRALPIAIVVGIAALAGLYFYLNNAF 166

The following BLAST results are available for this feature:
BLAST of Csa1G000640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RUBR1_DESDA5.8e-0651.16Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=rd... [more]
BLAST of Csa1G000640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNF5_CUCSA2.2e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G000640 PE=4 SV=1[more]
E5GBM0_CUCME9.2e-9197.09Electron transporter OS=Cucumis melo subsp. melo PE=4 SV=1[more]
E6NU05_JATCU2.5e-4867.38JHL07K02.5 protein OS=Jatropha curcas GN=JHL07K02.5 PE=4 SV=1[more]
B9RA53_RICCO5.6e-4870.68Electron transporter, putative OS=Ricinus communis GN=RCOM_1503210 PE=4 SV=1[more]
A0A022Q3G4_ERYGU1.2e-4569.12Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015294mg PE=4 SV=1[more]
BLAST of Csa1G000640 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51010.12.0e-4455.56 Rubredoxin-like superfamily protein[more]
AT5G17170.12.3e-0840.32 rubredoxin family protein[more]
BLAST of Csa1G000640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440502|ref|XP_004138023.1|3.1e-92100.00PREDICTED: uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus][more]
gi|659128800|ref|XP_008464376.1|1.3e-9097.09PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo][more]
gi|778655218|ref|XP_011649175.1|1.2e-72100.00PREDICTED: uncharacterized protein LOC101207574 isoform X2 [Cucumis sativus][more]
gi|659128802|ref|XP_008464377.1|4.0e-7197.14PREDICTED: uncharacterized protein LOC103502280 isoform X2 [Cucumis melo][more]
gi|719978727|ref|XP_010249256.1|2.8e-4859.88PREDICTED: uncharacterized protein LOC104591875 [Nelumbo nucifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004039Rubredoxin-type fold
IPR024934Rubredoxin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005506 iron ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU100764cucumber EST collection version 3.0transcribed_cluster
CU100787cucumber EST collection version 3.0transcribed_cluster
CU100835cucumber EST collection version 3.0transcribed_cluster
CU101454cucumber EST collection version 3.0transcribed_cluster
CU139916cucumber EST collection version 3.0transcribed_cluster
CU163374cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G000640.1Csa1G000640.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU139916CU139916transcribed_cluster
CU101454CU101454transcribed_cluster
CU100764CU100764transcribed_cluster
CU100787CU100787transcribed_cluster
CU100835CU100835transcribed_cluster
CU163374CU163374transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004039Rubredoxin-type foldGENE3DG3DSA:2.20.28.10coord: 81..120
score: 3.9
IPR024934Rubredoxin-like domainPROFILEPS50903RUBREDOXIN_LIKEcoord: 79..119
score: 12
NoneNo IPR availablePANTHERPTHR17130MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25coord: 31..172
score: 2.8
NoneNo IPR availablePANTHERPTHR17130:SF25SUBFAMILY NOT NAMEDcoord: 31..172
score: 2.8
NoneNo IPR availableunknownSSF57802Rubredoxin-likecoord: 79..124
score: 3.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G000640Cla019316Watermelon (97103) v1cuwmB094
Csa1G000640MELO3C026168Melon (DHL92) v3.5.1cumeB054
Csa1G000640ClCG06G018300Watermelon (Charleston Gray)cuwcgB081
Csa1G000640Lsi06G016770Bottle gourd (USVL1VR-Ls)culsiB070
Csa1G000640MELO3C026168.2Melon (DHL92) v3.6.1cumedB046
Csa1G000640Cla97C06G128060Watermelon (97103) v2cuwmbB078
Csa1G000640Bhi02G000474Wax gourdcuwgoB079
Csa1G000640CSPI01G00140Wild cucumber (PI 183967)cpicuB000
Csa1G000640CmaCh11G000080Cucurbita maxima (Rimu)cmacuB086
Csa1G000640CmoCh11G000070Cucurbita moschata (Rifu)cmocuB076
Csa1G000640CmoCh10G000200Cucurbita moschata (Rifu)cmocuB037
Csa1G000640CsGy1G000110Cucumber (Gy14) v2cgybcuB001
Csa1G000640Carg24561Silver-seed gourdcarcuB0636
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G000640Silver-seed gourdcarcuB0391
Csa1G000640Watermelon (97103) v2cuwmbB050
Csa1G000640Wax gourdcuwgoB061
Csa1G000640Cucumber (Chinese Long) v2cucuB002
Csa1G000640Cucumber (Chinese Long) v2cucuB014
Csa1G000640Cucumber (Gy14) v1cgycuB224
Csa1G000640Cucurbita maxima (Rimu)cmacuB048
Csa1G000640Cucurbita maxima (Rimu)cmacuB225
Csa1G000640Cucurbita moschata (Rifu)cmocuB211
Csa1G000640Melon (DHL92) v3.5.1cumeB022
Csa1G000640Melon (DHL92) v3.5.1cumeB078
Csa1G000640Watermelon (Charleston Gray)cuwcgB052
Csa1G000640Watermelon (97103) v1cuwmB028
Csa1G000640Cucurbita pepo (Zucchini)cpecuB361
Csa1G000640Cucurbita pepo (Zucchini)cpecuB513
Csa1G000640Cucurbita pepo (Zucchini)cpecuB653
Csa1G000640Bottle gourd (USVL1VR-Ls)culsiB041
Csa1G000640Cucumber (Gy14) v2cgybcuB014
Csa1G000640Cucumber (Gy14) v2cgybcuB096
Csa1G000640Melon (DHL92) v3.6.1cumedB018