CsGy1G000110 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G000110
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Electron transporter
Location	Chr1 : 96634 .. 98221 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCATTTCAGCTTCTTCTCTCAGTTTCCACCTTCCACCGAAGCCACATTACAAGCTTAACCAGGTTTTTCCCTTCACATTCTTCCACTTTCATTGCATTGCTCCTGTTCTACTTCCCGATCCTTTATTTATATGTATTTGTTTGTTATCAATCAATTATAATTGACTATCATTTATTTAAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTCTGCCTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTATCACTCCTTATCTCTCCTTCCTTTCTGCATTTACATTTTCCTTTTTCTAGATCCCTGTAAACCTCTCTGTTCGACCAATATGTAGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGGTAATTTGCTTCCCTCTTCTCAGGCTTGGACTATATGCACCAGTGTTTTTATAATTTCTTGTTTGTAATTCCATTCATGAATCATCCCACCTTCTTTCCAAACTTAATTTCGTACAATTCTCAAGTCTACCACTTCAAACCAGTTTCTCGAATTCTCTTCTCAATCTGACCAATTAGTTTACTGTTGACGTGGGTCGCCTTTATTTTTAACATGATTAAGTTCCTGCTATTATTTTAAACGGGAGTTTAAATAACACAACTTCTAGAAACCAACTTCAAACCACTTACATTCTGCTCCAACTCAACAAAGAAACTGAAATCTAATATTGTGCCTTGGCAGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGGGTAAGACGGAAAATCAAATCACTATCTTTATAAATGATCATATATTTTAATGATTGTTTATTCAGTCCGATTGATATCACGTTCAACGGTATAGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTGTAGGTTTATACTTGTACCTGAATAGCGCCTTCTAGATCGAGTGGCTTGCTCAATGACGGGGGATTAACACCATCATTTGTTTCACCATTTTCTTCTCGGGGCTGTTCTACGTTGATTTAGATATTATATGTATTTTTTTCCTTCCACTATCCAAAAACCCTGGCAAATTGTTTGAGCATTGCAGTATTATATATATATATATATTCAATTGTCTATTGATTATGTGTATTTGCACTCATTGGAATGGTCGGGTGCGTTGTACTAAATTGTAGGAAAATTCAAGCTCACCTACTGTTGGAAAGCTGGTTGTGTAAAACTGCTGTAGTTGCAGAACCAGGAAATGTGCTTTTAAGGATGGTCAGCGAGGCATCTGAGAAGTGAACTTTTGACCTTATGTAATTTGGGTCTTATAGATTCCAATATCAGCTAATTGTTAACATGTTATGTAGAGAAGTTTAGAGTAA

mRNA sequence

ATGGCTTCCATTTCAGCTTCTTCTCTCAGTTTCCACCTTCCACCGAAGCCACATTACAAGCTTAACCAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTCTGCCTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTGTAGGTTTATACTTATATTATATGAAAATTCAAGCTCACCTACTGTTGGAAAGCTGGTTGTGTAAAACTGCTGTAGTTGCAGAACCAGGAAATGTGCTTTTAAGGATGAGAAGTTTAGAGTAA

Coding sequence (CDS)

ATGGCTTCCATTTCAGCTTCTTCTCTCAGTTTCCACCTTCCACCGAAGCCACATTACAAGCTTAACCAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTCTGCCTCCAACCGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACGTAAGATTCCTTCTTTAAGGAAGCAAAACTCTGTTGTTGCTGCTGCTTCTCCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAAACTGTGAGTAAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACTTGTAGGTTTATACTTATATTATATGAAAATTCAAGCTCACCTACTGTTGGAAAGCTGGTTGTGTAAAACTGCTGTAGTTGCAGAACCAGGAAATGTGCTTTTAAGGATGAGAAGTTTAGAGTAA

Protein sequence

MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYYMKIQAHLLLESWLCKTAVVAEPGNVLLRMRSLE

Homology

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BLAST of CsGy1G000110 vs. NCBI nr
Match: XP_004138023.1 (PREDICTED: uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus] >KGN63440.1 hypothetical protein Csa_1G000640 [Cucumis sativus])

HSP 1 Score: 332.0 bits (850), Expect = 1.4e-87
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK
Sbjct: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY
Sbjct: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 167

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BLAST of CsGy1G000110 vs. NCBI nr
Match: XP_008464376.1 (PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo] >ADN33860.1 electron transporter [Cucumis melo subsp. melo])

HSP 1 Score: 328.2 bits (840), Expect = 2.0e-86
Identity = 163/167 (97.60%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+
Sbjct: 1   MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRR 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           QTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY
Sbjct: 121 QTVNKNDNEFDLRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 167

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BLAST of CsGy1G000110 vs. NCBI nr
Match: XP_023516579.1 (uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.6 bits (732), Expect = 6.6e-74
Identity = 145/167 (86.83%), Postives = 152/167 (91.02%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS SASSLSFHLPP PH K+NQEDGG DR SM   SASNR SLKSSFISPLR+IPS RK
Sbjct: 1   MASFSASSLSFHLPPNPHSKINQEDGGADRGSMLWGSASNRSSLKSSFISPLRQIPSTRK 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           Q   VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KLPD YFCPVCGAPKRRFRPYE
Sbjct: 61  QKCAVAAA-PKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           Q+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+GI+ALVGLYLY
Sbjct: 121 QSVTKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAVGILALVGLYLY 166

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BLAST of CsGy1G000110 vs. NCBI nr
Match: XP_022921625.1 (uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata])

HSP 1 Score: 283.5 bits (724), Expect = 5.6e-73
Identity = 146/168 (86.90%), Postives = 153/168 (91.07%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPLR+IPS RK
Sbjct: 44  MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLRQIPSTRK 103

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           Q   VAAA PKFSMRVASKQAYICRDCGYIYNDRTPF+KLPD YFCPVCGAPKRRFRPYE
Sbjct: 104 QKCAVAAA-PKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE 163

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAALGIVALVGLYLY 168
           Q+V+KNDNEFDVRKARKAQIQKDEAIGKVLPI AAA+GIVALVGLYLY
Sbjct: 164 QSVTKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAAVGIVALVGLYLY 210

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BLAST of CsGy1G000110 vs. NCBI nr
Match: XP_022987160.1 (uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 282.7 bits (722), Expect = 9.6e-73
Identity = 143/167 (85.63%), Postives = 151/167 (90.42%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SASNR SLKSSFISPL +IPS RK
Sbjct: 1   MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           Q   VAAA PKFS+RVASKQAYICRDCGYIYNDRTPF+KLPD YFCPVCGAPKRRFRPYE
Sbjct: 61  QKCAVAAA-PKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           Q+V+KNDNEFD RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLY
Sbjct: 121 QSVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVGLYLY 166

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BLAST of CsGy1G000110 vs. TAIR10
Match: AT5G51010.1 (Rubredoxin-like superfamily protein)

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-41
Identity = 88/159 (55.35%), Postives = 111/159 (69.81%), Query Frame = 0


Query: 9   LSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAA 68
           ++  LPP   Y          R+S+ L   +  L  +SSF+ P   +  L  + S+  ++
Sbjct: 1   MAMQLPPTTLY--------AGRSSVVLPPTTPTLQ-RSSFL-PYYSMRLLGNKKSLSKSS 60

Query: 69  SPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDN 128
           +P+FSMRV+SKQAYICRDCGYIYNDRTPFDKLPD YFCPVC APKRRFR Y   VSKN N
Sbjct: 61  APRFSMRVSSKQAYICRDCGYIYNDRTPFDKLPDNYFCPVCAAPKRRFRAYMPDVSKNVN 120

Query: 129 EFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           + DVRKARKA++Q+DEA+GK LPI  A+G++AL  LY Y
Sbjct: 121 DKDVRKARKAELQRDEAVGKALPIGIAVGVLALAALYFY 149

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BLAST of CsGy1G000110 vs. TAIR10
Match: AT5G17170.1 (rubredoxin family protein)

HSP 1 Score: 57.8 bits (138), Expect = 9.1e-09
Identity = 26/62 (41.94%), Postives = 34/62 (54.84%), Query Frame = 0


Query: 68  ASPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTV 126
           A P+F  ++   Q     +IC DCG+IY     FD+ PD Y CP C APK+RF  Y+   
Sbjct: 179 APPRFGRKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKYDVNT 238

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BLAST of CsGy1G000110 vs. Swiss-Prot
Match: sp|P04170|RUBR1_DESDA (Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) OX=525146 GN=rd1 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.1e-06
Identity = 22/43 (51.16%), Postives = 27/43 (62.79%), Query Frame = 0


Query: 80  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRFRP 119
           Q Y+C  CGY Y    +D  PFD+LPD + CPVCG  K +F P
Sbjct: 2   QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQFSP 44

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BLAST of CsGy1G000110 vs. Swiss-Prot
Match: sp|O26258|RUBR_METTH (Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_155 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.4e-05
Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 76  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPYE 121
           V++ + Y CR CGYIY+             TPF+ LP+ + CP CGA K+ F+P +
Sbjct: 8   VSAMKRYKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMFKPLD 63

[Close]

BLAST of CsGy1G000110 vs. Swiss-Prot
Match: sp|P24297|RUBR_PYRFU (Rubredoxin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=rub PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 5.8e-05
Identity = 20/50 (40.00%), Postives = 29/50 (58.00%), Query Frame = 0


Query: 82  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRPYE 121
           ++C+ CGYIY++            T F++LPD + CP+CGAPK  F   E
Sbjct: 4   WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLE 53

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BLAST of CsGy1G000110 vs. Swiss-Prot
Match: sp|P58992|RUBR1_CHLTE (Rubredoxin-1 OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) OX=194439 GN=rub1 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.3e-04
Identity = 20/50 (40.00%), Postives = 28/50 (56.00%), Query Frame = 0


Query: 81  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPY 120
           +++C +CGYIY+              PFDKLPD + CPVC  PK +F  +
Sbjct: 16  SWMCAECGYIYDPAEGNLETNIRPGMPFDKLPDDWSCPVCNHPKNQFTKF 65

[Close]

BLAST of CsGy1G000110 vs. Swiss-Prot
Match: sp|Q9AL94|RUBR_CLOAB (Rubredoxin OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=rd PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.5e-04
Identity = 20/51 (39.22%), Postives = 27/51 (52.94%), Query Frame = 0


Query: 82  YICRDCGYIY-----------NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQ 122
           Y+C  CGYIY           N  T F+ +PD + CP+CG  K +F P E+
Sbjct: 4   YVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEPSEE 54

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BLAST of CsGy1G000110 vs. TrEMBL
Match: tr|A0A0A0LNF5|A0A0A0LNF5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000640 PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 9.1e-88
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK
Sbjct: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY
Sbjct: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 167

[Close]

BLAST of CsGy1G000110 vs. TrEMBL
Match: tr|A0A1S3CLS9|A0A1S3CLS9_CUCME (uncharacterized protein LOC103502280 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502280 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86
Identity = 163/167 (97.60%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+
Sbjct: 1   MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRR 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           QTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY
Sbjct: 121 QTVNKNDNEFDLRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 167

[Close]

BLAST of CsGy1G000110 vs. TrEMBL
Match: tr|E5GBM0|E5GBM0_CUCME (Electron transporter OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.3e-86
Identity = 163/167 (97.60%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MASISASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRK 60
           MAS+SASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLR+
Sbjct: 1   MASVSASSLSFHLPPKPHYKLNQEDGGTDRNSMFLDSASNRLSLKSSFISPLRKIPSLRR 60

Query: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120
           QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE
Sbjct: 61  QNSVVAAASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYE 120

Query: 121 QTVSKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 168
           QTV+KNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY
Sbjct: 121 QTVNKNDNEFDLRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLY 167

[Close]

BLAST of CsGy1G000110 vs. TrEMBL
Match: tr|A0A1S3CMV6|A0A1S3CMV6_CUCME (uncharacterized protein LOC103502280 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502280 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 4.0e-67
Identity = 132/135 (97.78%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 33  MFLDSASNRLSLKSSFISPLRKIPSLRKQNSVVAAASPKFSMRVASKQAYICRDCGYIYN 92
           MFLDSASNRLSLKSSFISPLRKIPSLR+QNSVVAAASPKFSMRVASKQAYICRDCGYIYN
Sbjct: 1   MFLDSASNRLSLKSSFISPLRKIPSLRRQNSVVAAASPKFSMRVASKQAYICRDCGYIYN 60

Query: 93  DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLPI 152
           DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTV+KNDNEFD+RKARKAQIQKDEAIGKVLPI
Sbjct: 61  DRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVNKNDNEFDLRKARKAQIQKDEAIGKVLPI 120

Query: 153 AAALGIVALVGLYLY 168
           AAALGIVALVGLYLY
Sbjct: 121 AAALGIVALVGLYLY 135

[Close]

BLAST of CsGy1G000110 vs. TrEMBL
Match: tr|E6NU05|E6NU05_JATCU (JHL07K02.5 protein OS=Jatropha curcas OX=180498 GN=JHL07K02.5 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.6e-44
Identity = 92/136 (67.65%), Postives = 112/136 (82.35%), Query Frame = 0


Query: 35  LDSASNRLSLKSSFISPLRKIPSLRKQNSV---VAAASPKFSMRVASKQAYICRDCGYIY 94
           L + S+R +LKSSF SP   + SL   N +   +A+++P++SMRVASKQAYICRDCGYIY
Sbjct: 28  LRAPSDRFALKSSFFSPSLYLLSLANSNQLQQPLASSAPRYSMRVASKQAYICRDCGYIY 87

Query: 95  NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQTVSKNDNEFDVRKARKAQIQKDEAIGKVLP 154
           N+RTPF+KLPDKYFCPVCGAPKRRF+PY  TV+KNDN+ DVRKARKAQ+Q+DEAIG+ LP
Sbjct: 88  NERTPFEKLPDKYFCPVCGAPKRRFKPYAPTVTKNDNQTDVRKARKAQLQRDEAIGRALP 147

Query: 155 IAAALGIVALVGLYLY 168
           I  A+G VAL GLY Y
Sbjct: 148 IGIAVGAVALAGLYFY 163

The following BLAST results are available for this feature:

BLAST of CsGy1G000110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138023.1	1.4e-87	100.00	PREDICTED: uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus] >KG...	[more]
XP_008464376.1	2.0e-86	97.60	PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo] >ADN33...	[more]
XP_023516579.1	6.6e-74	86.83	uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022921625.1	5.6e-73	86.90	uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]	[more]
XP_022987160.1	9.6e-73	85.63	uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]	[more]

BLAST of CsGy1G000110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G51010.1	1.1e-41	55.35	Rubredoxin-like superfamily protein	[more]
AT5G17170.1	9.1e-09	41.94	rubredoxin family protein	[more]

BLAST of CsGy1G000110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P04170\|RUBR1_DESDA	3.1e-06	51.16	Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) OX=52...	[more]
sp\|O26258\|RUBR_METTH	3.4e-05	39.29	Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096...	[more]
sp\|P24297\|RUBR_PYRFU	5.8e-05	40.00	Rubredoxin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1...	[more]
sp\|P58992\|RUBR1_CHLTE	1.3e-04	40.00	Rubredoxin-1 OS=Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 1038...	[more]
sp\|Q9AL94\|RUBR_CLOAB	6.5e-04	39.22	Rubredoxin OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /...	[more]

BLAST of CsGy1G000110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LNF5\|A0A0A0LNF5_CUCSA	9.1e-88	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G000640 PE=4 SV=1	[more]
tr\|A0A1S3CLS9\|A0A1S3CLS9_CUCME	1.3e-86	97.60	uncharacterized protein LOC103502280 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|E5GBM0\|E5GBM0_CUCME	1.3e-86	97.60	Electron transporter OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A1S3CMV6\|A0A1S3CMV6_CUCME	4.0e-67	97.78	uncharacterized protein LOC103502280 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|E6NU05\|E6NU05_JATCU	1.6e-44	67.65	JHL07K02.5 protein OS=Jatropha curcas OX=180498 GN=JHL07K02.5 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR024935	Rubredoxin_dom
IPR024934	Rubredoxin-like_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005506	iron ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G000110.1	CsGy1G000110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.20.28.10		coord: 79..119 e-value: 8.5E-13 score: 49.7
None	No IPR available	PANTHER	PTHR45299	FAMILY NOT NAMED	coord: 32..168
None	No IPR available	SUPERFAMILY	SSF57802	Rubredoxin-like	coord: 79..124
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 79..119 score: 12.166
IPR024935	Rubredoxin domain	CDD	cd00730	rubredoxin	coord: 82..119 e-value: 1.78274E-12 score: 58.0862

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G000110	Cla019316	Watermelon (97103) v1	cgybwmB094
CsGy1G000110	Csa1G000640	Cucumber (Chinese Long) v2	cgybcuB001
CsGy1G000110	MELO3C026168	Melon (DHL92) v3.5.1	cgybmeB048
CsGy1G000110	ClCG06G018300	Watermelon (Charleston Gray)	cgybwcgB078
CsGy1G000110	CSPI01G00140	Wild cucumber (PI 183967)	cgybcpiB001
CsGy1G000110	CmaCh11G000080	Cucurbita maxima (Rimu)	cgybcmaB028
CsGy1G000110	CmoCh11G000070	Cucurbita moschata (Rifu)	cgybcmoB028
CsGy1G000110	CmoCh10G000200	Cucurbita moschata (Rifu)	cgybcmoB005
CsGy1G000110	Lsi06G016770	Bottle gourd (USVL1VR-Ls)	cgyblsiB067
CsGy1G000110	MELO3C026168.2	Melon (DHL92) v3.6.1	cgybmedB043
CsGy1G000110	CsaV3_1G000140	Cucumber (Chinese Long) v3	cgybcucB002
CsGy1G000110	Cla97C06G128060	Watermelon (97103) v2	cgybwmbB076
CsGy1G000110	Bhi02G000474	Wax gourd	cgybwgoB077
CsGy1G000110	Carg24561	Silver-seed gourd	carcgybB0608

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G000110	Wild cucumber (PI 183967)	cgybcpiB012
CsGy1G000110	Silver-seed gourd	carcgybB0371
CsGy1G000110	Cucumber (Chinese Long) v3	cgybcucB011
CsGy1G000110	Watermelon (97103) v2	cgybwmbB048
CsGy1G000110	Wax gourd	cgybwgoB060
CsGy1G000110	Cucumber (Gy14) v2	cgybcgybB005
CsGy1G000110	Cucurbita maxima (Rimu)	cgybcmaB004
CsGy1G000110	Cucurbita maxima (Rimu)	cgybcmaB081
CsGy1G000110	Cucurbita moschata (Rifu)	cgybcmoB076
CsGy1G000110	Cucurbita pepo (Zucchini)	cgybcpeB053
CsGy1G000110	Cucurbita pepo (Zucchini)	cgybcpeB078
CsGy1G000110	Cucurbita pepo (Zucchini)	cgybcpeB126
CsGy1G000110	Cucumber (Chinese Long) v2	cgybcuB012
CsGy1G000110	Bottle gourd (USVL1VR-Ls)	cgyblsiB035
CsGy1G000110	Melon (DHL92) v3.5.1	cgybmeB020
CsGy1G000110	Melon (DHL92) v3.6.1	cgybmedB017
CsGy1G000110	Watermelon (Charleston Gray)	cgybwcgB048
CsGy1G000110	Watermelon (97103) v1	cgybwmB028