CsGy7G021680 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G021680
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr7 : 23697052 .. 23697852 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCAAAGCCTTAGGTTTGTGCAGTAGCAAATATTAATGGGCTGCTGCTGTTGCTGCTGCTGCTGCAAAGTTTCTAGCTTTTCATCTTTGGCTTATAATTATGGCTAAGCCTAATGTCTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACAAGGCTAGGGTCAGTCATCAACCCATTACAATAACAAAACGAACCCAAACCCTTATTTGTCCTAGCTTATTTTAATATTTTTTTTCTTTTTTCTTTTTTGGGTTTTGGTTTTTTCAGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAGCACAGTGAAGCTACTCTTGTATTGATTGATGTATGTGTTTCTCTTACCAACGATATATCTAATCTAATTGAAATATTATTGTTTTCTTATTTATGGTACGTAGGGTTTGGAAATGTTGAAATTATTTTTGTAATGTTGGAGAGCATTAGTCATATATATGTGGTTTTACGTTTTTAGATATGATTTTCTTAGAAGATAAAGATATATGGATACATACAATGTTAATAGAAATATAGTAATCGTTTAATTTGAATGTGTATAATTAATTTTGTGTGTTATTGAGAGGTTAGATGGTAGAAAGGTTGAGACCGATGAAGTGTATGTTTGAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATCATTGAGAGAATTTGAGGAAGAAAGAAAAAGATGTCAGTGCTCTTACGTTTCTACTGATCAATCCCCAAATAAAGTGCTGGAGTTGCTCAAGGAACCCCTTTCAGCTCCATTTTGA

mRNA sequence

AAGCAAAGCCTTAGGTTTGTGCAGTAGCAAATATTAATGGGCTGCTGCTGTTGCTGCTGCTGCTGCAAAGTTTCTAGCTTTTCATCTTTGGCTTATAATTATGGCTAAGCCTAATGTCTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACAAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAGCACAGTGAAGCTACTCTTGTATTGATTGATATGGTAGAAAGGTTGAGACCGATGAAGTGTATGTTTGAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATCATTGAGAGAATTTGAGGAAGAAAGAAAAAGATGTCAGTGCTCTTACGTTTCTACTGATCAATCCCCAAATAAAGTGCTGGAGTTGCTCAAGGAACCCCTTTCAGCTCCATTTTGA

Coding sequence (CDS)

ATGGCTAAGCCTAATGTCTGTTGCTCCATTGAATTGGAGCCCAAAACCTTGAACCAAGGCCAACTCCACAAGGCTAGGGAAGTGGCTGCTGATGTTGTTCAGAAACTGGAGCACAGTGAAGCTACTCTTGTATTGATTGATATGGTAGAAAGGTTGAGACCGATGAAGTGTATGTTTGAAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATCATTGAGAGAATTTGAGGAAGAAAGAAAAAGATGTCAGTGCTCTTACGTTTCTACTGATCAATCCCCAAATAAAGTGCTGGAGTTGCTCAAGGAACCCCTTTCAGCTCCATTTTGA

Protein sequence

MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFERRGGGGGGGGGGSLREFEEERKRCQCSYVSTDQSPNKVLELLKEPLSAPF

Homology

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BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_011659685.1 (PREDICTED: uncharacterized protein LOC105436221 [Cucumis sativus] >KGN45594.1 hypothetical protein Csa_7G452980 [Cucumis sativus])

HSP 1 Score: 162.9 bits (411), Expect = 6.1e-37
Identity = 103/110 (93.64%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMF 
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMF- 60

Query: 61  RXXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPLSAPF 111
                XXXXXXXXXXXXXXXXX CQCSYVSTDQSPNKVLELLKEPLSAPF
Sbjct: 61  ----GXXXXXXXXXXXXXXXXXXCQCSYVSTDQSPNKVLELLKEPLSAPF 105

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BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_008462443.1 (PREDICTED: uncharacterized protein LOC103500790 [Cucumis melo])

HSP 1 Score: 141.4 bits (355), Expect = 1.9e-30
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLIDMVERL+PMK MFE
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDMVERLKPMKYMFE 60

Query: 61  R--XXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPLSAPF 111
           R   XXXXXXXXXXXXXXXXXXXX     YVSTDQSPNKVL+LLKEPLSAPF
Sbjct: 61  RGGVXXXXXXXXXXXXXXXXXXXXXXXXXYVSTDQSPNKVLQLLKEPLSAPF 112

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BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_023521779.1 (uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181.1 uncharacterized protein LOC111807614 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116.7 bits (291), Expect = 5.0e-23
Identity = 68/122 (55.74%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPN  CSIE+EP+TLNQGQLH+AREVAADVVQKLE +EA+L+LID+VERL+PM  M E
Sbjct: 1   MAKPNARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHMIE 60

Query: 61  R------------XXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPLSA 111
           R                                 RCQCSY+S  +SPN+ L+LLKEPLSA
Sbjct: 61  RGELPLLPPLSSPLSSAAGPPAPPFVGDYKEERGRCQCSYISI-ESPNQ-LQLLKEPLSA 120

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BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_022954046.1 (uncharacterized protein LOC111456424 [Cucurbita moschata])

HSP 1 Score: 110.5 bits (275), Expect = 3.6e-21
Identity = 76/123 (61.79%), Postives = 89/123 (72.36%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPN  CSIE+EP+TL QGQLH+AREVAADVVQKLE +EA+L+LID+VERL+PM  + E
Sbjct: 1   MAKPNARCSIEMEPRTLKQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHIIE 60

Query: 61  R-------------XXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPLS 111
           R             XXXXXXXXXXX          RCQCSY+   +SPN+ L+LLKEPLS
Sbjct: 61  RGELPLLPPLSSXXXXXXXXXXXXXFVGDYNEESGRCQCSYICI-ESPNQ-LQLLKEPLS 120

[Close]

BLAST of CsGy7G021680 vs. NCBI nr
Match: XP_022992446.1 (uncharacterized protein LOC111488747 [Cucurbita maxima])

HSP 1 Score: 110.2 bits (274), Expect = 4.7e-21
Identity = 77/124 (62.10%), Postives = 90/124 (72.58%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPN  CSIE+EP+TLNQGQLH+AREVAADVVQKLE +EA+L+LID+VERL+PM  + E
Sbjct: 1   MAKPNARCSIEMEPRTLNQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHIIE 60

Query: 61  --------------RXXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPL 111
                          XXXXXXXXXXXX         RCQCSY+   +SPN+ L+LLKEPL
Sbjct: 61  GGGELPLLPPLXXXXXXXXXXXXXXXXVGDYKEERGRCQCSYICI-ESPNQ-LQLLKEPL 120

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BLAST of CsGy7G021680 vs. TrEMBL
Match: tr|A0A0A0K9S8|A0A0A0K9S8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.0e-37
Identity = 103/110 (93.64%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMF 
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMF- 60

Query: 61  RXXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPLSAPF 111
                XXXXXXXXXXXXXXXXX CQCSYVSTDQSPNKVLELLKEPLSAPF
Sbjct: 61  ----GXXXXXXXXXXXXXXXXXXCQCSYVSTDQSPNKVLELLKEPLSAPF 105

[Close]

BLAST of CsGy7G021680 vs. TrEMBL
Match: tr|A0A1S3CH00|A0A1S3CH00_CUCME (uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-30
Identity = 98/112 (87.50%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKCMFE 60
           MAKPNVCCSIELEPKTLNQGQLH+AREVAADVVQKLE SEA+LVLIDMVERL+PMK MFE
Sbjct: 1   MAKPNVCCSIELEPKTLNQGQLHQAREVAADVVQKLEPSEASLVLIDMVERLKPMKYMFE 60

Query: 61  R--XXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPLSAPF 111
           R   XXXXXXXXXXXXXXXXXXXX     YVSTDQSPNKVL+LLKEPLSAPF
Sbjct: 61  RGGVXXXXXXXXXXXXXXXXXXXXXXXXXYVSTDQSPNKVLQLLKEPLSAPF 112

[Close]

BLAST of CsGy7G021680 vs. TrEMBL
Match: tr|A0A2I4G5G0|A0A2I4G5G0_9ROSI (uncharacterized protein LOC109004886 OS=Juglans regia OX=51240 GN=LOC109004886 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12
Identity = 51/121 (42.15%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 5   NVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPM--------- 64
           N+CCSIE+EPKTLNQGQL++AREVAADV QK+E +EA++V ID     RP+         
Sbjct: 4   NICCSIEMEPKTLNQGQLNRAREVAADVAQKMEPNEASIVFIDQGSSSRPLVPGNDIDAD 63

Query: 65  ---KCMFERXXXXXXXXXXXXXXXXXXXXXRCQCSYVST---DQSPNKVLELLKEPLSAP 111
              K + E                       CQCS ++T    +SP++V    +EPLSAP
Sbjct: 64  DQRKVLEEGKQLLYKPVECEETKTTRIMGRPCQCSCIATMISVESPDQVGH--REPLSAP 122

[Close]

BLAST of CsGy7G021680 vs. TrEMBL
Match: tr|A0A068TRJ5|A0A068TRJ5_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021947001 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.2e-11
Identity = 46/110 (41.82%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 5   NVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLID---MVERLRPMKCMFER 64
           N CCSIELEP+TL QGQ+ +AREVA D++QK E +EA+ +L++    V  ++ M    + 
Sbjct: 3   NFCCSIELEPRTLRQGQIDQAREVAVDIMQKKEQNEASSILVEGLKPVASIKEMVMAVQE 62

Query: 65  XXXXXXXXXXXXXXXXXXXXXRCQCSYVSTD-QSPNKVLELLKEPLSAPF 111
                                 CQCS +ST   SPN+   LLKEP+SAPF
Sbjct: 63  IDMLHEEDEAKDKIINSITETCCQCSSISTTIDSPNQ--SLLKEPVSAPF 110

[Close]

BLAST of CsGy7G021680 vs. TrEMBL
Match: tr|A0A2C9W269|A0A2C9W269_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G132700 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-10
Identity = 50/115 (43.48%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 1   MAKPNVCCSIELEPKTLNQGQLHKAREVAADVVQKLEHSEATLVLIDMVERLRPMKC--M 60
           MAK  VCCSIE+EP+TL +GQL  AREVAADVVQK+E  EA++V I+ ++ +  MK   M
Sbjct: 31  MAK--VCCSIEMEPRTLREGQLTHAREVAADVVQKMELKEASIVFIEELKSVPAMKMEEM 90

Query: 61  FE---RXXXXXXXXXXXXXXXXXXXXXRCQCSYVSTDQSPNKVLELLKEPLSAPF 111
            E   +                      CQCS    + SP    + +KEPLSAPF
Sbjct: 91  EENENKEKHKFLNVDCKEDGEAPKIESPCQCSVTEMEYSPE---QTIKEPLSAPF 140

The following BLAST results are available for this feature:

BLAST of CsGy7G021680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659685.1	6.1e-37	93.64	PREDICTED: uncharacterized protein LOC105436221 [Cucumis sativus] >KGN45594.1 hy...	[more]
XP_008462443.1	1.9e-30	87.50	PREDICTED: uncharacterized protein LOC103500790 [Cucumis melo]	[more]
XP_023521779.1	5.0e-23	55.74	uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181....	[more]
XP_022954046.1	3.6e-21	61.79	uncharacterized protein LOC111456424 [Cucurbita moschata]	[more]
XP_022992446.1	4.7e-21	62.10	uncharacterized protein LOC111488747 [Cucurbita maxima]	[more]

BLAST of CsGy7G021680 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy7G021680 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G021680 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K9S8\|A0A0A0K9S8_CUCSA	4.0e-37	93.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1	[more]
tr\|A0A1S3CH00\|A0A1S3CH00_CUCME	1.3e-30	87.50	uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=...	[more]
tr\|A0A2I4G5G0\|A0A2I4G5G0_9ROSI	1.2e-12	42.15	uncharacterized protein LOC109004886 OS=Juglans regia OX=51240 GN=LOC109004886 P...	[more]
tr\|A0A068TRJ5\|A0A068TRJ5_COFCA	2.2e-11	41.82	Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021947001 PE=4 ...	[more]
tr\|A0A2C9W269\|A0A2C9W269_MANES	1.1e-10	43.48	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_04G132700 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G021680.1	CsGy7G021680.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34808	FAMILY NOT NAMED	coord: 5..110
None	No IPR available	PANTHER	PTHR34808:SF1	SUBFAMILY NOT NAMED	coord: 5..110

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G021680	Cla000890	Watermelon (97103) v1	cgybwmB514
CsGy7G021680	Csa7G452980	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G021680	MELO3C024449	Melon (DHL92) v3.5.1	cgybmeB457
CsGy7G021680	ClCG09G000070	Watermelon (Charleston Gray)	cgybwcgB484
CsGy7G021680	CSPI07G23420	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G021680	CmaCh17G007790	Cucurbita maxima (Rimu)	cgybcmaB919
CsGy7G021680	CmoCh17G007470	Cucurbita moschata (Rifu)	cgybcmoB902
CsGy7G021680	Lsi02G030000	Bottle gourd (USVL1VR-Ls)	cgyblsiB472
CsGy7G021680	Cp4.1LG12g08320	Cucurbita pepo (Zucchini)	cgybcpeB899
CsGy7G021680	MELO3C024449.2	Melon (DHL92) v3.6.1	cgybmedB455
CsGy7G021680	CsaV3_7G035400	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G021680	Cla97C09G161930	Watermelon (97103) v2	cgybwmbB541
CsGy7G021680	Bhi09G000363	Wax gourd	cgybwgoB680
CsGy7G021680	Carg09502	Silver-seed gourd	carcgybB1010

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None