Carg09502 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTGCTGCTGTGGGCGCTGTTGCAGAGTTTGTAGCTACTCATCTTTAGCCTATGGCTAAGCCTAATGCTCGTTGCTCCATTGAAATGGAGCCCAGAACCTTGAAGCAAGGCCAACTCCACCAAGCTAGGGTCAGCCAAAAACCCTTTGAAATCCATACCCTTTTGTGGCTATTGGCTTTTGAAGCTTTGTTTTAATGGAGTCTGATTGTTCTGCAGGAAGTTGCTGCTGATGTTGTTCAAAAACTGGAACCCACTGAAGCTTCTCTTCTATTGATTGATGTATGTTTTTCTTTGCAACTCATCTAATATCTCGTTTATTGTTGTTAAAATCAAATGATATCGATGTTCCCGACAAAATTGTGGGGAAATATAATGATCCAAGGATCGTATGGTTCTTCGACAACTTAGGCTAAATTAATAAAAATGCCGTTGAATTTTGTATTTATTATTTTAAAACTTTAAAAAAAATTTAATAATGAGGTTCCAAAAAAAATCCATAAAATATCATTAATGTTAGTATTCTATTTCAAAAACACTGTTAACTTTAATTATTATTATTATTTTTTAATAATACCCTTCATTTTTTTTCAACTTTTTTTTAAAAAGTTCAAAAATACCGCTGTTATTATGTTAAAATAATACCCATAAAATTTTAAAAAAATCATTTTATAGATATATATTTTTTTAAATACTCAGATAATTTTTAAGTACTTTTGAAAGTTAAAAGAGTATTTTTTAATAGTTTTTTTTAAGTTAAAAGTGTATTTTTGAAACAAAATATTAAATATGCAGATTTAAAATTATGGATTTTTTAACTTTAAAAAAAAAAAAGTTTAAAAGGTATCTTTAGATTTTAGGAATTTTTTTTTAGGTAAAATTCAAAAGCATTTTTATTAATTTAAATATGTTAAATTATAAATTTAATTATGAAATGTTTGAATTTTATTTAGTTTGTCTCTAAATTTTAATAAATATTATGTCAAATAAATTCTAAATTTTTAATTTTATATTTAATAGTTGATATTTTTTAAATTTGTAAAATTTAATCTATTAGAATATACCAATAAAATCGAGAACTAAACTAGCATGTACTTTAACTAATTAAAAATATTAAAATGATTTGTTCCAACTGATATGAGTATACAGATCGTAGAACGACTCAAACCGATGAACCATATAATTGAAAGAGGAGAGTTGCCATTGTTGCCGCCGTTGTCGTCGCCGTTGTCGTCGGCGGCGGCGGCCGGGCCACCGCCACCGCCATTTGTGGGGGATTATAATGAAGAAAGAGGAAGATGCCAATGCTCTTACATTTGTATTGAATCCCCAAATCAATTGCAGCTGCTTAAGGAACCCCTTTCAGCTCCTTTTTAGATTAGATGCTTTGGACTATCATTTATGAGCTCTCCCAATATAATTTAATTAATTTAGACATA CTGCTGCTGTGGGCGCTGTTGCAGAGTTTGTAGCTACTCATCTTTAGCCTATGGCTAAGCCTAATGCTCGTTGCTCCATTGAAATGGAGCCCAGAACCTTGAAGCAAGGCCAACTCCACCAAGCTAGGGAAGTTGCTGCTGATGTTGTTCAAAAACTGGAACCCACTGAAGCTTCTCTTCTATTGATTGATATCGTAGAACGACTCAAACCGATGAACCATATAATTGAAAGAGGAGAGTTGCCATTGTTGCCGCCGTTGTCGTCGCCGTTGTCGTCGGCGGCGGCGGCCGGGCCACCGCCACCGCCATTTGTGGGGGATTATAATGAAGAAAGAGGAAGATGCCAATGCTCTTACATTTGTATTGAATCCCCAAATCAATTGCAGCTGCTTAAGGAACCCCTTTCAGCTCCTTTTTAGATTAGATGCTTTGGACTATCATTTATGAGCTCTCCCAATATAATTTAATTAATTTAGACATA ATGGCTAAGCCTAATGCTCGTTGCTCCATTGAAATGGAGCCCAGAACCTTGAAGCAAGGCCAACTCCACCAAGCTAGGGAAGTTGCTGCTGATGTTGTTCAAAAACTGGAACCCACTGAAGCTTCTCTTCTATTGATTGATATCGTAGAACGACTCAAACCGATGAACCATATAATTGAAAGAGGAGAGTTGCCATTGTTGCCGCCGTTGTCGTCGCCGTTGTCGTCGGCGGCGGCGGCCGGGCCACCGCCACCGCCATTTGTGGGGGATTATAATGAAGAAAGAGGAAGATGCCAATGCTCTTACATTTGTATTGAATCCCCAAATCAATTGCAGCTGCTTAAGGAACCCCTTTCAGCTCCTTTTTAG MAKPNARCSIEMEPRTLKQGQLHQAREVAADVVQKLEPTEASLLLIDIVERLKPMNHIIERGELPLLPPLSSPLSSAAAAGPPPPPFVGDYNEERGRCQCSYICIESPNQLQLLKEPLSAPF
BLAST of Carg09502 vs. NCBI nr
Match: XP_022954046.1 (uncharacterized protein LOC111456424 [Cucurbita moschata]) HSP 1 Score: 204.5 bits (519), Expect = 2.0e-49 Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 0
BLAST of Carg09502 vs. NCBI nr
Match: XP_023521779.1 (uncharacterized protein LOC111785636 [Cucurbita pepo subsp. pepo] >XP_023549181.1 uncharacterized protein LOC111807614 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 197.6 bits (501), Expect = 2.5e-47 Identity = 103/122 (84.43%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Carg09502 vs. NCBI nr
Match: XP_022992446.1 (uncharacterized protein LOC111488747 [Cucurbita maxima]) HSP 1 Score: 190.7 bits (483), Expect = 3.0e-45 Identity = 117/123 (95.12%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of Carg09502 vs. NCBI nr
Match: XP_022152180.1 (uncharacterized protein LOC111019960 [Momordica charantia]) HSP 1 Score: 120.2 bits (300), Expect = 5.0e-24 Identity = 69/122 (56.56%), Postives = 79/122 (64.75%), Query Frame = 0
BLAST of Carg09502 vs. NCBI nr
Match: XP_008462443.1 (PREDICTED: uncharacterized protein LOC103500790 [Cucumis melo]) HSP 1 Score: 109.4 bits (272), Expect = 8.8e-21 Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of Carg09502 vs. TrEMBL
Match: tr|A0A1S3CH00|A0A1S3CH00_CUCME (uncharacterized protein LOC103500790 OS=Cucumis melo OX=3656 GN=LOC103500790 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.8e-21 Identity = 80/123 (65.04%), Postives = 92/123 (74.80%), Query Frame = 0
BLAST of Carg09502 vs. TrEMBL
Match: tr|A0A0A0K9S8|A0A0A0K9S8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G452980 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 9.3e-19 Identity = 69/124 (55.65%), Postives = 82/124 (66.13%), Query Frame = 0
BLAST of Carg09502 vs. TrEMBL
Match: tr|A0A2I4G5G0|A0A2I4G5G0_9ROSI (uncharacterized protein LOC109004886 OS=Juglans regia OX=51240 GN=LOC109004886 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.3e-11 Identity = 54/134 (40.30%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of Carg09502 vs. TrEMBL
Match: tr|A0A2K2C011|A0A2K2C011_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G188400v3 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.6e-10 Identity = 51/118 (43.22%), Postives = 64/118 (54.24%), Query Frame = 0
BLAST of Carg09502 vs. TrEMBL
Match: tr|A0A068TRJ5|A0A068TRJ5_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021947001 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.6e-10 Identity = 56/124 (45.16%), Postives = 68/124 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |