CsGy7G007580 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCCTTGCAGAATTCCGAAGCTTTCTTCTCTGAAGCTCAAGCCTTTCTCTTCAATTTCTCTCCAACAAACTCCACTGGAATCTCCTGTTTCAACCACAAACCTCGCTTCGCCTCTAACCCCTCATTTTCTCGAACAATCAGCCCGCTCCTCTCAGTGGCATTTCATCAAGCAGGTAGAGTCCTCTCTTACTCCCTCTCTTATCTCCCAAACCCTTCTAAACCTCCACGAATCTCCACAGGTTGTTCTCGATTTCTTAAACCATTTTCACCATAAACTATCTGATGCCCGAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCGCCTTACACCTTCTCAGACAGGCTCTTGGGGGTGGCACTACCAATTCAATTAGGGAGATTTTTGAATTCTTAGCTGCTTCTCGTGATCGTTTGGGTTTCAAAAGTAGCATTGTTTTTGATTACTTGATTAAGTCTTGCTGTGACATGAATAGGGCAGATGAGGCTTTTGAATGTTTTTACACTATGAAGGAAAAGGGTGTCTTACCTACCATTGAGACTTGCAACAGTTTGCTGAGTTTGTTTCTGAAGTTGAATAGAACTGAGGCAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGAATTAAATCTAGCGTTTATACGTTCAACATTATGATTAATGTTCTATGCAAAGAGGGGAAGTTGAAGAAGGCTAAGGATTTCGTTGGACATATGGAGACTTCAGGGGTTAAACCGAATATCGTTACTTACAATACGATTGTTCATGGATATTGTTCGAGCGGAAGAGTTGAAGCGGCTGATGCTATTTTGACTACTATGAAGAGACAAAAGATTGAACCTGATTCTTTCACATATGGATCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTTCAAAAGGGGTTGCGACCTAGTGCTGTAATTTATAATACTTTGATTGATGGATTTTGTAATAAGGGTAATTTGGATATGGCCTCTGCTTACAAGGATGAGATGTTGAAGAAGGGCATAAGTCCAACCATGTCAACTTATAACTCGTTGATTCATGCATTGTTTATGGAGCAAAGAACAGATGAAGCTGAATGTATGATCAAAGAAATTCAGGAGAAAGGAATATCTCCTGATGCTATTACATATAATATCTTGATAAATGGGTATTGTAGATGTGCAAATGCAAAGAAAGCATTTCTTCTACATGATGAAATGTTGGCGAGTGGTATTAAGCCGACAAAAAAGACATACACATCACTTCTTCATGTTTTGAGCAAAAAGAACAGAATGAAGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTGAAGGTGTGTTGCCTGATGCCATTATGTTTAATGCTTTGATTGATGGTCATTGTTCTAACAGTAATGTCAAGGGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGTCATTGCAGGGAAGGAAAAGTTGAAGAAGCCCGTGAACTTTTTGACGAGATGAAGAGAAGAGGGATTAAGCCCGACCATATTAGTTTCAATACACTGATTAGTGGTTATAGTAGACGAGGAGACATAAAGGATGCTTTCAGAGTACGGAATGAGATGCTTGATACAGGATTCAATCCGACTGTTCTAACTTATAATGCCCTTGTACAAGGGTTATGCAAAAACCAAGAAGGTGATCTTGCTGAAGAGCTTCTTAAAGAAATGGTAAGTAAAGGAATGACACCTGATGATACTACTTATTTCACATTGATTGAAGGTATTGCAAAAGTTAACATTCCAGATGAAAACAAGAACACATAA ATGATTCCTTGCAGAATTCCGAAGCTTTCTTCTCTGAAGCTCAAGCCTTTCTCTTCAATTTCTCTCCAACAAACTCCACTGGAATCTCCTGTTTCAACCACAAACCTCGCTTCGCCTCTAACCCCTCATTTTCTCGAACAATCAGCCCGCTCCTCTCAGTGGCATTTCATCAAGCAGGTAGAGTCCTCTCTTACTCCCTCTCTTATCTCCCAAACCCTTCTAAACCTCCACGAATCTCCACAGGTTGTTCTCGATTTCTTAAACCATTTTCACCATAAACTATCTGATGCCCGAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCGCCTTACACCTTCTCAGACAGGCTCTTGGGGGTGGCACTACCAATTCAATTAGGGAGATTTTTGAATTCTTAGCTGCTTCTCGTGATCGTTTGGGTTTCAAAAGTAGCATTGTTTTTGATTACTTGATTAAGTCTTGCTGTGACATGAATAGGGCAGATGAGGCTTTTGAATGTTTTTACACTATGAAGGAAAAGGGTGTCTTACCTACCATTGAGACTTGCAACAGTTTGCTGAGTTTGTTTCTGAAGTTGAATAGAACTGAGGCAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGAATTAAATCTAGCGTTTATACGTTCAACATTATGATTAATGTTCTATGCAAAGAGGGGAAGTTGAAGAAGGCTAAGGATTTCGTTGGACATATGGAGACTTCAGGGGTTAAACCGAATATCGTTACTTACAATACGATTGTTCATGGATATTGTTCGAGCGGAAGAGTTGAAGCGGCTGATGCTATTTTGACTACTATGAAGAGACAAAAGATTGAACCTGATTCTTTCACATATGGATCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTTCAAAAGGGGTTGCGACCTAGTGCTGTAATTTATAATACTTTGATTGATGGATTTTGTAATAAGGGTAATTTGGATATGGCCTCTGCTTACAAGGATGAGATGTTGAAGAAGGGCATAAGTCCAACCATGTCAACTTATAACTCGTTGATTCATGCATTGTTTATGGAGCAAAGAACAGATGAAGCTGAATGTATGATCAAAGAAATTCAGGAGAAAGGAATATCTCCTGATGCTATTACATATAATATCTTGATAAATGGGTATTGTAGATGTGCAAATGCAAAGAAAGCATTTCTTCTACATGATGAAATGTTGGCGAGTGGTATTAAGCCGACAAAAAAGACATACACATCACTTCTTCATGTTTTGAGCAAAAAGAACAGAATGAAGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTGAAGGTGTGTTGCCTGATGCCATTATGTTTAATGCTTTGATTGATGGTCATTGTTCTAACAGTAATGTCAAGGGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGTCATTGCAGGGAAGGAAAAGTTGAAGAAGCCCGTGAACTTTTTGACGAGATGAAGAGAAGAGGGATTAAGCCCGACCATATTAGTTTCAATACACTGATTAGTGGTTATAGTAGACGAGGAGACATAAAGGATGCTTTCAGAGTACGGAATGAGATGCTTGATACAGGATTCAATCCGACTGTTCTAACTTATAATGCCCTTGTACAAGGGTTATGCAAAAACCAAGAAGGTGATCTTGCTGAAGAGCTTCTTAAAGAAATGGTAAGTAAAGGAATGACACCTGATGATACTACTTATTTCACATTGATTGAAGGTATTGCAAAAGTTAACATTCCAGATGAAAACAAGAACACATAA ATGATTCCTTGCAGAATTCCGAAGCTTTCTTCTCTGAAGCTCAAGCCTTTCTCTTCAATTTCTCTCCAACAAACTCCACTGGAATCTCCTGTTTCAACCACAAACCTCGCTTCGCCTCTAACCCCTCATTTTCTCGAACAATCAGCCCGCTCCTCTCAGTGGCATTTCATCAAGCAGGTAGAGTCCTCTCTTACTCCCTCTCTTATCTCCCAAACCCTTCTAAACCTCCACGAATCTCCACAGGTTGTTCTCGATTTCTTAAACCATTTTCACCATAAACTATCTGATGCCCGAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCGCCTTACACCTTCTCAGACAGGCTCTTGGGGGTGGCACTACCAATTCAATTAGGGAGATTTTTGAATTCTTAGCTGCTTCTCGTGATCGTTTGGGTTTCAAAAGTAGCATTGTTTTTGATTACTTGATTAAGTCTTGCTGTGACATGAATAGGGCAGATGAGGCTTTTGAATGTTTTTACACTATGAAGGAAAAGGGTGTCTTACCTACCATTGAGACTTGCAACAGTTTGCTGAGTTTGTTTCTGAAGTTGAATAGAACTGAGGCAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGAATTAAATCTAGCGTTTATACGTTCAACATTATGATTAATGTTCTATGCAAAGAGGGGAAGTTGAAGAAGGCTAAGGATTTCGTTGGACATATGGAGACTTCAGGGGTTAAACCGAATATCGTTACTTACAATACGATTGTTCATGGATATTGTTCGAGCGGAAGAGTTGAAGCGGCTGATGCTATTTTGACTACTATGAAGAGACAAAAGATTGAACCTGATTCTTTCACATATGGATCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTTCAAAAGGGGTTGCGACCTAGTGCTGTAATTTATAATACTTTGATTGATGGATTTTGTAATAAGGGTAATTTGGATATGGCCTCTGCTTACAAGGATGAGATGTTGAAGAAGGGCATAAGTCCAACCATGTCAACTTATAACTCGTTGATTCATGCATTGTTTATGGAGCAAAGAACAGATGAAGCTGAATGTATGATCAAAGAAATTCAGGAGAAAGGAATATCTCCTGATGCTATTACATATAATATCTTGATAAATGGGTATTGTAGATGTGCAAATGCAAAGAAAGCATTTCTTCTACATGATGAAATGTTGGCGAGTGGTATTAAGCCGACAAAAAAGACATACACATCACTTCTTCATGTTTTGAGCAAAAAGAACAGAATGAAGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTGAAGGTGTGTTGCCTGATGCCATTATGTTTAATGCTTTGATTGATGGTCATTGTTCTAACAGTAATGTCAAGGGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGTCATTGCAGGGAAGGAAAAGTTGAAGAAGCCCGTGAACTTTTTGACGAGATGAAGAGAAGAGGGATTAAGCCCGACCATATTAGTTTCAATACACTGATTAGTGGTTATAGTAGACGAGGAGACATAAAGGATGCTTTCAGAGTACGGAATGAGATGCTTGATACAGGATTCAATCCGACTGTTCTAACTTATAATGCCCTTGTACAAGGGTTATGCAAAAACCAAGAAGGTGATCTTGCTGAAGAGCTTCTTAAAGAAATGGTAAGTAAAGGAATGACACCTGATGATACTACTTATTTCACATTGATTGAAGGTATTGCAAAAGTTAACATTCCAGATGAAAACAAGAACACATAA MIPCRIPKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKNT
BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_004137128.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 2.0e-100 Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of CsGy7G007580 vs. NCBI nr
Match: KGN43973.1 (hypothetical protein Csa_7G075050 [Cucumis sativus]) HSP 1 Score: 376.3 bits (965), Expect = 2.0e-100 Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_008454892.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucumis melo]) HSP 1 Score: 342.4 bits (877), Expect = 3.2e-90 Identity = 171/191 (89.53%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_022136116.1 (pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Momordica charantia]) HSP 1 Score: 251.5 bits (641), Expect = 7.4e-63 Identity = 136/203 (67.00%), Postives = 153/203 (75.37%), Query Frame = 0
BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_022952975.1 (pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucurbita moschata]) HSP 1 Score: 246.1 bits (627), Expect = 3.1e-61 Identity = 135/199 (67.84%), Postives = 153/199 (76.88%), Query Frame = 0
BLAST of CsGy7G007580 vs. TAIR10
Match: AT2G15630.1 (Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 150.6 bits (379), Expect = 3.2e-36 Identity = 78/190 (41.05%), Postives = 116/190 (61.05%), Query Frame = 0
BLAST of CsGy7G007580 vs. TAIR10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 47.0 bits (110), Expect = 5.0e-05 Identity = 36/143 (25.17%), Postives = 64/143 (44.76%), Query Frame = 0
BLAST of CsGy7G007580 vs. Swiss-Prot
Match: sp|Q9ZQF1|PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g15630 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 5.8e-35 Identity = 78/190 (41.05%), Postives = 116/190 (61.05%), Query Frame = 0
BLAST of CsGy7G007580 vs. Swiss-Prot
Match: sp|Q9SZ10|PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 9.1e-04 Identity = 36/143 (25.17%), Postives = 64/143 (44.76%), Query Frame = 0
BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A0A0K3C0|A0A0A0K3C0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075050 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 1.3e-100 Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A1S3C0D3|A0A1S3C0D3_CUCME (pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495200 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 2.1e-90 Identity = 171/191 (89.53%), Postives = 179/191 (93.72%), Query Frame = 0
BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A2P4JS57|A0A2P4JS57_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_06685 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 5.3e-41 Identity = 101/192 (52.60%), Postives = 125/192 (65.10%), Query Frame = 0
BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A218XEX1|A0A218XEX1_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004196 PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 6.9e-41 Identity = 99/199 (49.75%), Postives = 128/199 (64.32%), Query Frame = 0
BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|D7STD9|D7STD9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0055g00970 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 9.0e-41 Identity = 85/160 (53.12%), Postives = 115/160 (71.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |