CsGy7G007580 (gene) Cucumber (Gy14) v2

NameCsGy7G007580
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPentatricopeptide repeat-containing protein At2g15630, mitochondrial
LocationChr7 : 5429096 .. 5430982 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCCTTGCAGAATTCCGAAGCTTTCTTCTCTGAAGCTCAAGCCTTTCTCTTCAATTTCTCTCCAACAAACTCCACTGGAATCTCCTGTTTCAACCACAAACCTCGCTTCGCCTCTAACCCCTCATTTTCTCGAACAATCAGCCCGCTCCTCTCAGTGGCATTTCATCAAGCAGGTAGAGTCCTCTCTTACTCCCTCTCTTATCTCCCAAACCCTTCTAAACCTCCACGAATCTCCACAGGTTGTTCTCGATTTCTTAAACCATTTTCACCATAAACTATCTGATGCCCGAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCGCCTTACACCTTCTCAGACAGGCTCTTGGGGGTGGCACTACCAATTCAATTAGGGAGATTTTTGAATTCTTAGCTGCTTCTCGTGATCGTTTGGGTTTCAAAAGTAGCATTGTTTTTGATTACTTGATTAAGTCTTGCTGTGACATGAATAGGGCAGATGAGGCTTTTGAATGTTTTTACACTATGAAGGAAAAGGGTGTCTTACCTACCATTGAGACTTGCAACAGTTTGCTGAGTTTGTTTCTGAAGTTGAATAGAACTGAGGCAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGAATTAAATCTAGCGTTTATACGTTCAACATTATGATTAATGTTCTATGCAAAGAGGGGAAGTTGAAGAAGGCTAAGGATTTCGTTGGACATATGGAGACTTCAGGGGTTAAACCGAATATCGTTACTTACAATACGATTGTTCATGGATATTGTTCGAGCGGAAGAGTTGAAGCGGCTGATGCTATTTTGACTACTATGAAGAGACAAAAGATTGAACCTGATTCTTTCACATATGGATCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTTCAAAAGGGGTTGCGACCTAGTGCTGTAATTTATAATACTTTGATTGATGGATTTTGTAATAAGGGTAATTTGGATATGGCCTCTGCTTACAAGGATGAGATGTTGAAGAAGGGCATAAGTCCAACCATGTCAACTTATAACTCGTTGATTCATGCATTGTTTATGGAGCAAAGAACAGATGAAGCTGAATGTATGATCAAAGAAATTCAGGAGAAAGGAATATCTCCTGATGCTATTACATATAATATCTTGATAAATGGGTATTGTAGATGTGCAAATGCAAAGAAAGCATTTCTTCTACATGATGAAATGTTGGCGAGTGGTATTAAGCCGACAAAAAAGACATACACATCACTTCTTCATGTTTTGAGCAAAAAGAACAGAATGAAGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTGAAGGTGTGTTGCCTGATGCCATTATGTTTAATGCTTTGATTGATGGTCATTGTTCTAACAGTAATGTCAAGGGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGTCATTGCAGGGAAGGAAAAGTTGAAGAAGCCCGTGAACTTTTTGACGAGATGAAGAGAAGAGGGATTAAGCCCGACCATATTAGTTTCAATACACTGATTAGTGGTTATAGTAGACGAGGAGACATAAAGGATGCTTTCAGAGTACGGAATGAGATGCTTGATACAGGATTCAATCCGACTGTTCTAACTTATAATGCCCTTGTACAAGGGTTATGCAAAAACCAAGAAGGTGATCTTGCTGAAGAGCTTCTTAAAGAAATGGTAAGTAAAGGAATGACACCTGATGATACTACTTATTTCACATTGATTGAAGGTATTGCAAAAGTTAACATTCCAGATGAAAACAAGAACACATAA

mRNA sequence

ATGATTCCTTGCAGAATTCCGAAGCTTTCTTCTCTGAAGCTCAAGCCTTTCTCTTCAATTTCTCTCCAACAAACTCCACTGGAATCTCCTGTTTCAACCACAAACCTCGCTTCGCCTCTAACCCCTCATTTTCTCGAACAATCAGCCCGCTCCTCTCAGTGGCATTTCATCAAGCAGGTAGAGTCCTCTCTTACTCCCTCTCTTATCTCCCAAACCCTTCTAAACCTCCACGAATCTCCACAGGTTGTTCTCGATTTCTTAAACCATTTTCACCATAAACTATCTGATGCCCGAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCGCCTTACACCTTCTCAGACAGGCTCTTGGGGGTGGCACTACCAATTCAATTAGGGAGATTTTTGAATTCTTAGCTGCTTCTCGTGATCGTTTGGGTTTCAAAAGTAGCATTGTTTTTGATTACTTGATTAAGTCTTGCTGTGACATGAATAGGGCAGATGAGGCTTTTGAATGTTTTTACACTATGAAGGAAAAGGGTGTCTTACCTACCATTGAGACTTGCAACAGTTTGCTGAGTTTGTTTCTGAAGTTGAATAGAACTGAGGCAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGAATTAAATCTAGCGTTTATACGTTCAACATTATGATTAATGTTCTATGCAAAGAGGGGAAGTTGAAGAAGGCTAAGGATTTCGTTGGACATATGGAGACTTCAGGGGTTAAACCGAATATCGTTACTTACAATACGATTGTTCATGGATATTGTTCGAGCGGAAGAGTTGAAGCGGCTGATGCTATTTTGACTACTATGAAGAGACAAAAGATTGAACCTGATTCTTTCACATATGGATCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTTCAAAAGGGGTTGCGACCTAGTGCTGTAATTTATAATACTTTGATTGATGGATTTTGTAATAAGGGTAATTTGGATATGGCCTCTGCTTACAAGGATGAGATGTTGAAGAAGGGCATAAGTCCAACCATGTCAACTTATAACTCGTTGATTCATGCATTGTTTATGGAGCAAAGAACAGATGAAGCTGAATGTATGATCAAAGAAATTCAGGAGAAAGGAATATCTCCTGATGCTATTACATATAATATCTTGATAAATGGGTATTGTAGATGTGCAAATGCAAAGAAAGCATTTCTTCTACATGATGAAATGTTGGCGAGTGGTATTAAGCCGACAAAAAAGACATACACATCACTTCTTCATGTTTTGAGCAAAAAGAACAGAATGAAGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTGAAGGTGTGTTGCCTGATGCCATTATGTTTAATGCTTTGATTGATGGTCATTGTTCTAACAGTAATGTCAAGGGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGTCATTGCAGGGAAGGAAAAGTTGAAGAAGCCCGTGAACTTTTTGACGAGATGAAGAGAAGAGGGATTAAGCCCGACCATATTAGTTTCAATACACTGATTAGTGGTTATAGTAGACGAGGAGACATAAAGGATGCTTTCAGAGTACGGAATGAGATGCTTGATACAGGATTCAATCCGACTGTTCTAACTTATAATGCCCTTGTACAAGGGTTATGCAAAAACCAAGAAGGTGATCTTGCTGAAGAGCTTCTTAAAGAAATGGTAAGTAAAGGAATGACACCTGATGATACTACTTATTTCACATTGATTGAAGGTATTGCAAAAGTTAACATTCCAGATGAAAACAAGAACACATAA

Coding sequence (CDS)

ATGATTCCTTGCAGAATTCCGAAGCTTTCTTCTCTGAAGCTCAAGCCTTTCTCTTCAATTTCTCTCCAACAAACTCCACTGGAATCTCCTGTTTCAACCACAAACCTCGCTTCGCCTCTAACCCCTCATTTTCTCGAACAATCAGCCCGCTCCTCTCAGTGGCATTTCATCAAGCAGGTAGAGTCCTCTCTTACTCCCTCTCTTATCTCCCAAACCCTTCTAAACCTCCACGAATCTCCACAGGTTGTTCTCGATTTCTTAAACCATTTTCACCATAAACTATCTGATGCCCGAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCGCCTTACACCTTCTCAGACAGGCTCTTGGGGGTGGCACTACCAATTCAATTAGGGAGATTTTTGAATTCTTAGCTGCTTCTCGTGATCGTTTGGGTTTCAAAAGTAGCATTGTTTTTGATTACTTGATTAAGTCTTGCTGTGACATGAATAGGGCAGATGAGGCTTTTGAATGTTTTTACACTATGAAGGAAAAGGGTGTCTTACCTACCATTGAGACTTGCAACAGTTTGCTGAGTTTGTTTCTGAAGTTGAATAGAACTGAGGCAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGAATTAAATCTAGCGTTTATACGTTCAACATTATGATTAATGTTCTATGCAAAGAGGGGAAGTTGAAGAAGGCTAAGGATTTCGTTGGACATATGGAGACTTCAGGGGTTAAACCGAATATCGTTACTTACAATACGATTGTTCATGGATATTGTTCGAGCGGAAGAGTTGAAGCGGCTGATGCTATTTTGACTACTATGAAGAGACAAAAGATTGAACCTGATTCTTTCACATATGGATCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTTCAAAAGGGGTTGCGACCTAGTGCTGTAATTTATAATACTTTGATTGATGGATTTTGTAATAAGGGTAATTTGGATATGGCCTCTGCTTACAAGGATGAGATGTTGAAGAAGGGCATAAGTCCAACCATGTCAACTTATAACTCGTTGATTCATGCATTGTTTATGGAGCAAAGAACAGATGAAGCTGAATGTATGATCAAAGAAATTCAGGAGAAAGGAATATCTCCTGATGCTATTACATATAATATCTTGATAAATGGGTATTGTAGATGTGCAAATGCAAAGAAAGCATTTCTTCTACATGATGAAATGTTGGCGAGTGGTATTAAGCCGACAAAAAAGACATACACATCACTTCTTCATGTTTTGAGCAAAAAGAACAGAATGAAGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTGAAGGTGTGTTGCCTGATGCCATTATGTTTAATGCTTTGATTGATGGTCATTGTTCTAACAGTAATGTCAAGGGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGTCATTGCAGGGAAGGAAAAGTTGAAGAAGCCCGTGAACTTTTTGACGAGATGAAGAGAAGAGGGATTAAGCCCGACCATATTAGTTTCAATACACTGATTAGTGGTTATAGTAGACGAGGAGACATAAAGGATGCTTTCAGAGTACGGAATGAGATGCTTGATACAGGATTCAATCCGACTGTTCTAACTTATAATGCCCTTGTACAAGGGTTATGCAAAAACCAAGAAGGTGATCTTGCTGAAGAGCTTCTTAAAGAAATGGTAAGTAAAGGAATGACACCTGATGATACTACTTATTTCACATTGATTGAAGGTATTGCAAAAGTTAACATTCCAGATGAAAACAAGAACACATAA

Protein sequence

MIPCRIPKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKNT
BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_004137128.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 2.0e-100
Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 1   MIPCRIPKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60
           MIPCRIPKLSSLKLKPFSSISLQ+TPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV
Sbjct: 1   MIPCRIPKLSSLKLKPFSSISLQKTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60

Query: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120
           ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL
Sbjct: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120

Query: 121 RQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180
           +QALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK
Sbjct: 121 KQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180

Query: 181 GVLPTIETCNS 192
           GVLPTIETCNS
Sbjct: 181 GVLPTIETCNS 191

BLAST of CsGy7G007580 vs. NCBI nr
Match: KGN43973.1 (hypothetical protein Csa_7G075050 [Cucumis sativus])

HSP 1 Score: 376.3 bits (965), Expect = 2.0e-100
Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 1   MIPCRIPKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60
           MIPCRIPKLSSLKLKPFSSISLQ+TPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV
Sbjct: 1   MIPCRIPKLSSLKLKPFSSISLQKTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60

Query: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120
           ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL
Sbjct: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120

Query: 121 RQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180
           +QALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK
Sbjct: 121 KQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180

Query: 181 GVLPTIETCNS 192
           GVLPTIETCNS
Sbjct: 181 GVLPTIETCNS 191

BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_008454892.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucumis melo])

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-90
Identity = 171/191 (89.53%), Postives = 179/191 (93.72%), Query Frame = 0

Query: 1   MIPCRIPKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60
           MIP RIPKLSSLKL PFSSISL  TPLESP S+TN ASPLTPHFLEQSARSSQWHFIKQV
Sbjct: 1   MIPYRIPKLSSLKLNPFSSISLHNTPLESPNSSTNAASPLTPHFLEQSARSSQWHFIKQV 60

Query: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120
           ES+LTPSLISQTLLNLH+SPQ+VLDFLNH HHKL DA TLCLAIVIVARLPSPKPALHLL
Sbjct: 61  ESTLTPSLISQTLLNLHQSPQIVLDFLNHLHHKLPDAHTLCLAIVIVARLPSPKPALHLL 120

Query: 121 RQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180
           +QALGGGTTNSIREIFE LAASRDRLGFKSSIVFD+LIKSCCDMNRADEA ECFYTMKEK
Sbjct: 121 KQALGGGTTNSIREIFELLAASRDRLGFKSSIVFDHLIKSCCDMNRADEALECFYTMKEK 180

Query: 181 GVLPTIETCNS 192
           G+LP IETCN+
Sbjct: 181 GILPKIETCNN 191

BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_022136116.1 (pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Momordica charantia])

HSP 1 Score: 251.5 bits (641), Expect = 7.4e-63
Identity = 136/203 (67.00%), Postives = 153/203 (75.37%), Query Frame = 0

Query: 1   MIPCRIPKLSSLKLK---------PFSSISLQQTPLE----SPVSTTNLASPLTPHFLEQ 60
           M P +    SSL  K         PFSSISLQ+TP E    SP   TN   PLT +FLE+
Sbjct: 1   MNPYKFLNRSSLNFKTTTHCHSFAPFSSISLQKTPQETLSQSPNIPTNPILPLTHNFLEE 60

Query: 61  SARSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIV 120
           SARSSQWH IKQ+  +LTPSLISQTL NLHE+PQ+VLD LNH HH + DA + CLAIVIV
Sbjct: 61  SARSSQWHLIKQIVPNLTPSLISQTLQNLHETPQIVLDLLNHLHHGVIDAESRCLAIVIV 120

Query: 121 ARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRA 180
           ARLPSP+P+L LL+ A+G GTT S+REIFE LA SRDRLG KSSIVFDYL+KSCC+MNRA
Sbjct: 121 ARLPSPRPSLQLLKLAVGSGTT-SVREIFEMLAISRDRLGVKSSIVFDYLVKSCCEMNRA 180

Query: 181 DEAFECFYTMKEKGVLPTIETCN 191
           DE FECFY MKEKGV P IETCN
Sbjct: 181 DEGFECFYMMKEKGVAPKIETCN 202

BLAST of CsGy7G007580 vs. NCBI nr
Match: XP_022952975.1 (pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucurbita moschata])

HSP 1 Score: 246.1 bits (627), Expect = 3.1e-61
Identity = 135/199 (67.84%), Postives = 153/199 (76.88%), Query Frame = 0

Query: 5   RIPKLSSLKLKP---------FSSISLQQTP----LESPVSTTNLASPLTPHFLEQSARS 64
           +I KLSSL  +          FSSIS  +TP      SP STT   S LT + LE+ ARS
Sbjct: 5   KILKLSSLNFQATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFARS 64

Query: 65  SQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLP 124
           SQWHFIKQVES+LTPSLIS+TL NLH+SPQ+VL+ LNH  H L D++T CLAIVIVARLP
Sbjct: 65  SQWHFIKQVESTLTPSLISETLQNLHDSPQIVLELLNHLQHGLLDSQTHCLAIVIVARLP 124

Query: 125 SPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAF 184
           SPKP L LL+QA+G G TNS++EIFE LAASRDRLG KSSIVFDYLIKSCC++NRADEAF
Sbjct: 125 SPKPTLQLLKQAVGCG-TNSVKEIFELLAASRDRLGVKSSIVFDYLIKSCCELNRADEAF 184

Query: 185 ECFYTMKEKGVLPTIETCN 191
           ECFY MKE GV P IETCN
Sbjct: 185 ECFYMMKENGVAPKIETCN 202

BLAST of CsGy7G007580 vs. TAIR10
Match: AT2G15630.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 150.6 bits (379), Expect = 3.2e-36
Identity = 78/190 (41.05%), Postives = 116/190 (61.05%), Query Frame = 0

Query: 2   IPCRI-PKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 61
           +PC +  ++S L    +S  + + + L    +  ++  P+T   L +S RSSQWH ++ V
Sbjct: 6   VPCILRHRISILSGAGYSPAAARLSSLAQTSTPESVLPPITSEILLESIRSSQWHIVEHV 65

Query: 62  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 121
              LTPSL+S TLL+L ++P +  +F+NH      D +T CLAI ++++L SPKP   LL
Sbjct: 66  ADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPVTQLL 125

Query: 122 RQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 181
           ++ +     NSIR +F+ L  + DRL  KS+I+FD L++ CC +   DEA ECFY MKEK
Sbjct: 126 KEVV-TSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEK 185

Query: 182 GVLPTIETCN 191
           G  P  ETCN
Sbjct: 186 GFYPKTETCN 194

BLAST of CsGy7G007580 vs. TAIR10
Match: AT4G26680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 47.0 bits (110), Expect = 5.0e-05
Identity = 36/143 (25.17%), Postives = 64/143 (44.76%), Query Frame = 0

Query: 52  SQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLP 111
           S W  + ++   L    +   LL + +   + L+F N    +   + +L    +++  L 
Sbjct: 67  SDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLT 126

Query: 112 SP---KPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRAD 171
                K A  +LR  L  G  +   ++F+ L  S  R    +  VFD L K+   + +  
Sbjct: 127 KNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY-RECDSTPRVFDSLFKTFAHLKKFR 186

Query: 172 EAFECFYTMKEKGVLPTIETCNS 192
            A + F  MK+ G LPT+E+CN+
Sbjct: 187 NATDTFMQMKDYGFLPTVESCNA 208

BLAST of CsGy7G007580 vs. Swiss-Prot
Match: sp|Q9ZQF1|PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g15630 PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.8e-35
Identity = 78/190 (41.05%), Postives = 116/190 (61.05%), Query Frame = 0

Query: 2   IPCRI-PKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 61
           +PC +  ++S L    +S  + + + L    +  ++  P+T   L +S RSSQWH ++ V
Sbjct: 6   VPCILRHRISILSGAGYSPAAARLSSLAQTSTPESVLPPITSEILLESIRSSQWHIVEHV 65

Query: 62  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 121
              LTPSL+S TLL+L ++P +  +F+NH      D +T CLAI ++++L SPKP   LL
Sbjct: 66  ADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVISKLSSPKPVTQLL 125

Query: 122 RQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 181
           ++ +     NSIR +F+ L  + DRL  KS+I+FD L++ CC +   DEA ECFY MKEK
Sbjct: 126 KEVV-TSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEK 185

Query: 182 GVLPTIETCN 191
           G  P  ETCN
Sbjct: 186 GFYPKTETCN 194

BLAST of CsGy7G007580 vs. Swiss-Prot
Match: sp|Q9SZ10|PP338_ARATH (Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g26680 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.1e-04
Identity = 36/143 (25.17%), Postives = 64/143 (44.76%), Query Frame = 0

Query: 52  SQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLP 111
           S W  + ++   L    +   LL + +   + L+F N    +   + +L    +++  L 
Sbjct: 67  SDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLT 126

Query: 112 SP---KPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRAD 171
                K A  +LR  L  G  +   ++F+ L  S  R    +  VFD L K+   + +  
Sbjct: 127 KNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSY-RECDSTPRVFDSLFKTFAHLKKFR 186

Query: 172 EAFECFYTMKEKGVLPTIETCNS 192
            A + F  MK+ G LPT+E+CN+
Sbjct: 187 NATDTFMQMKDYGFLPTVESCNA 208

BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A0A0K3C0|A0A0A0K3C0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075050 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 1.3e-100
Identity = 189/191 (98.95%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 1   MIPCRIPKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60
           MIPCRIPKLSSLKLKPFSSISLQ+TPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV
Sbjct: 1   MIPCRIPKLSSLKLKPFSSISLQKTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60

Query: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120
           ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL
Sbjct: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120

Query: 121 RQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180
           +QALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK
Sbjct: 121 KQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180

Query: 181 GVLPTIETCNS 192
           GVLPTIETCNS
Sbjct: 181 GVLPTIETCNS 191

BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A1S3C0D3|A0A1S3C0D3_CUCME (pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103495200 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 2.1e-90
Identity = 171/191 (89.53%), Postives = 179/191 (93.72%), Query Frame = 0

Query: 1   MIPCRIPKLSSLKLKPFSSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQV 60
           MIP RIPKLSSLKL PFSSISL  TPLESP S+TN ASPLTPHFLEQSARSSQWHFIKQV
Sbjct: 1   MIPYRIPKLSSLKLNPFSSISLHNTPLESPNSSTNAASPLTPHFLEQSARSSQWHFIKQV 60

Query: 61  ESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLL 120
           ES+LTPSLISQTLLNLH+SPQ+VLDFLNH HHKL DA TLCLAIVIVARLPSPKPALHLL
Sbjct: 61  ESTLTPSLISQTLLNLHQSPQIVLDFLNHLHHKLPDAHTLCLAIVIVARLPSPKPALHLL 120

Query: 121 RQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEK 180
           +QALGGGTTNSIREIFE LAASRDRLGFKSSIVFD+LIKSCCDMNRADEA ECFYTMKEK
Sbjct: 121 KQALGGGTTNSIREIFELLAASRDRLGFKSSIVFDHLIKSCCDMNRADEALECFYTMKEK 180

Query: 181 GVLPTIETCNS 192
           G+LP IETCN+
Sbjct: 181 GILPKIETCNN 191

BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A2P4JS57|A0A2P4JS57_QUESU (Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=58331 GN=CFP56_06685 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 5.3e-41
Identity = 101/192 (52.60%), Postives = 125/192 (65.10%), Query Frame = 0

Query: 3   PCRIPKLSSLKLKPFSSI----SLQQTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIK 62
           P   PK SS  L  FSS     S  QT      +T N   P+T ++L+ S +SSQWH IK
Sbjct: 18  PILFPKDSSPSLALFSSTPQPNSSPQTQTLPQYATAN-PPPITLNYLQNSIQSSQWHLIK 77

Query: 63  QVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALH 122
            +  +LT SLIS TL NLH++PQ+VL+F+ H      D +T CLAI IVARLPSPK  + 
Sbjct: 78  HLAPNLTSSLISTTLFNLHKTPQLVLEFITHIEFHRLDIKTCCLAIAIVARLPSPKATIQ 137

Query: 123 LLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMK 182
            L+QA+  G   SI  IF  LA +RD L  KSSIVFD LI++CC++ RADEAFECF  MK
Sbjct: 138 FLKQAISCGIA-SIGVIFNELALARDSLSIKSSIVFDLLIRACCELKRADEAFECFNMMK 197

Query: 183 EKGVLPTIETCN 191
           EKG++P IETCN
Sbjct: 198 EKGIVPKIETCN 207

BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|A0A218XEX1|A0A218XEX1_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004196 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.9e-41
Identity = 99/199 (49.75%), Postives = 128/199 (64.32%), Query Frame = 0

Query: 1   MIPCRIPKLSSLKLKPF-------SSISLQQTPLESPVSTTNLASPLTPHFLEQSARSSQ 60
           M P  +  L+S  LK            S Q +   S + T  LA+ +TP  L  S RSSQ
Sbjct: 1   MKPHNLKLLASQNLKSLLPGAHRRRQFSPQFSSSASQLETQGLANEITPEVLLSSVRSSQ 60

Query: 61  WHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHK-LSDARTLCLAIVIVARLPS 120
           WHFI+Q+   LTPSLIS TL  LH++P++ LDFL+  + + L DA+TLCL   I +R+PS
Sbjct: 61  WHFIEQLAPQLTPSLISTTLSCLHKTPELALDFLSRINPQCLPDAKTLCLGAAIASRIPS 120

Query: 121 PKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFE 180
           PKPAL LL + +       ++E+F+ LA    +LG KSSIVFD+LI++CCD+ RADEA E
Sbjct: 121 PKPALQLLNRTVSSSAL-PVKEVFDELAVCHAQLGSKSSIVFDFLIRACCDLKRADEAME 180

Query: 181 CFYTMKEKGVLPTIETCNS 192
           CFY MKEKG LP IETCNS
Sbjct: 181 CFYMMKEKGFLPKIETCNS 198

BLAST of CsGy7G007580 vs. TrEMBL
Match: tr|D7STD9|D7STD9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0055g00970 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 9.0e-41
Identity = 85/160 (53.12%), Postives = 115/160 (71.88%), Query Frame = 0

Query: 31  VSTTNLASPLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHF 90
           ++++    P+T   + +S  SSQWHFI+QV  +LTP+LIS  L NL   PQ+V DF++H 
Sbjct: 38  LASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHL 97

Query: 91  HHKLSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKS 150
           H    D ++ CLA+V++ARLPSPK AL LL+Q +G     + RE+F+ L  SRDRL  KS
Sbjct: 98  HPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATN-RELFDELTLSRDRLSVKS 157

Query: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCN 191
           SIVFD L++ CC++ RADEAF+CFY MKEKG++P IETCN
Sbjct: 158 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCN 196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004137128.12.0e-10098.95PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
KGN43973.12.0e-10098.95hypothetical protein Csa_7G075050 [Cucumis sativus][more]
XP_008454892.13.2e-9089.53PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
XP_022136116.17.4e-6367.00pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Momordica ... [more]
XP_022952975.13.1e-6167.84pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT2G15630.13.2e-3641.05Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G26680.15.0e-0525.17Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9ZQF1|PP152_ARATH5.8e-3541.05Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidop... [more]
sp|Q9SZ10|PP338_ARATH9.1e-0425.17Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0K3C0|A0A0A0K3C0_CUCSA1.3e-10098.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G075050 PE=4 SV=1[more]
tr|A0A1S3C0D3|A0A1S3C0D3_CUCME2.1e-9089.53pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Cucumis ... [more]
tr|A0A2P4JS57|A0A2P4JS57_QUESU5.3e-4152.60Pentatricopeptide repeat-containing protein, mitochondrial OS=Quercus suber OX=5... [more]
tr|A0A218XEX1|A0A218XEX1_PUNGR6.9e-4149.75Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr004196 PE=4 SV=1[more]
tr|D7STD9|D7STD9_VITVI9.0e-4153.13Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0055g00970 PE=4 SV=... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR033443PPR_long
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
biological_process GO:0008150 biological_process
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0005575 cellular_component
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G007580.1CsGy7G007580.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 153..185
e-value: 1.2E-5
score: 23.2
coord: 573..605
e-value: 1.1E-8
score: 32.7
coord: 327..360
e-value: 8.6E-9
score: 33.0
coord: 257..291
e-value: 2.9E-9
score: 34.5
coord: 292..325
e-value: 2.8E-10
score: 37.7
coord: 433..466
e-value: 1.3E-6
score: 26.2
coord: 188..218
e-value: 7.8E-4
score: 17.5
coord: 363..396
e-value: 2.5E-8
score: 31.6
coord: 397..430
e-value: 5.3E-9
score: 33.7
coord: 537..570
e-value: 1.2E-8
score: 32.5
coord: 222..256
e-value: 3.1E-9
score: 34.4
coord: 502..535
e-value: 2.6E-13
score: 47.3
coord: 468..501
e-value: 2.4E-7
score: 28.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 569..618
e-value: 1.8E-12
score: 47.1
coord: 499..542
e-value: 1.5E-17
score: 63.4
coord: 221..268
e-value: 1.4E-14
score: 53.9
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 145..196
e-value: 1.2E-4
score: 22.0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 461..492
e-value: 4.4E-9
score: 35.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 255..289
score: 12.715
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 290..324
score: 15.017
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 185..219
score: 8.703
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 220..254
score: 12.386
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 150..184
score: 10.83
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 360..394
score: 11.093
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 570..604
score: 12.452
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 535..569
score: 12.66
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 500..534
score: 15.784
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 605..628
score: 5.009
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 430..464
score: 10.687
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 465..499
score: 11.016
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 325..359
score: 12.332
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 395..429
score: 13.526
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 515..626
e-value: 3.9E-35
score: 123.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 352..425
e-value: 2.4E-20
score: 74.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 239..351
e-value: 3.4E-38
score: 133.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 109..238
e-value: 2.5E-22
score: 81.1
coord: 432..514
e-value: 7.3E-25
score: 89.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 187..226
coord: 265..389
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 303..455
e-value: 1.5E-17
score: 63.5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 48..619
NoneNo IPR availablePANTHERPTHR24015:SF918SUBFAMILY NOT NAMEDcoord: 48..619

The following gene(s) are paralogous to this gene:

None