Cp4.1LG15g05090 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG15g05090
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCp4.1LG15 : 6052652 .. 6054565 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGTTACAAAATTCTGAAGCTTTCTTCGTTGAATTTCCAAGCAACCACTAATTCCCAATCCTTCGCACTTTTCTCTTCGATTTCTCCCCATAAAACACCACCAGATTCTCAATTTCCATCTCCCAATTCAACCACAAAAGCCAATTCGACTCTAACCCAGAATTCTCTCGAGAAATTCGCCCGGTCCTCTCAGTGGCATTTCATCAAACAGGTTGAATCCACTCTGACTCCGTCGCTTATTTCCGATACCCTTCAAAATCTTCACGATTCTCCACAAATTGTTCTCGAATTGTTAAACCATTTACAACATGGATTACTTGATTCTCGAACCCATTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCACTTTACAGCTTCTAAAACAAGCTGTTGGGTGTGGCACTAATTCAGTTAAGGAGATTTTTGAATTGTTAGCGGCTTCTCGTGATCAATTGGGTGTTAAAAGCAGTATTGTTTTTGATTACTTGATTAAGTCCTGTTGCGAATTGAATAGGGCAGATGAAGCTTTTGAGTGTTTTTACATGATGAAGGAAAAGGGTGTTGCACCCAAGATTGAGACCTGCAATGATTTGCTGAGTTTGTTTCTTAAGTTGAATAGAACTGAAACAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGGATAAAATCTAGCGTTTATACATTTAACATAATGATCAATGTTCTATGCAAGGAGGGGAAGTTGAAGAAGGCTAAGGATTTTATTGAGCATATGGAATGCTTAGGGGTTAAACCGAATGTTGTTACGTATAATACAATTGTTCATGGATATTGTTCGAGAGGGAGAGTTGAAGGGGCTGATGCTATTTTGAGTACTATGAAAAGGAAAAATATTCGACCTGATTCTTACACATATGGATCTCTAATCAGCGGAATGTGCAAGCAAGGACGACTTGAAGAAGCGTCGAAGATTTTTGAAGAAATGGTACAAAATGGGTTACTTCCTAGTGCTGTAACTTATAATACTTTGATTGATGGATTTTGCAATAAGGGTAATTTGGATATGGCCTTTGGTTATAAGGATGAAATGATGAAGAAGGGCATAATGCCGACTGTATCAACGTATAACTTGTTGATTCATGCATTGTTTATGGAGCAAAAATATGATGAAGCTGAAGGTATGATCAAGGAAATTCACGAGAAAGGTATTGCTCCCGATGCTATTACGTATAATATCTTGATCAATGGGTATTGTAGATGTGGAAATGCAAAGAAAGCATTTCGTCTGCACGACGAAATGTTGGCGAGTGGCATTCGGCCAACGAAAGTGACATACACATCACTAATTCATGTTTTGAGCAAAAAGAATAGAATAAAGGAGGCAGATGATTTGTTTAAAAAGATCACAAGTAAAGGTATGTTGCCCGATGTCATTATGTTTAATGCTTTGATAGATGGTCATTGCTCAAACGGTAATGTGGAGCGTGCGTTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCGTCCCGATGAAGTGACTTTCAATACAATAATGCAAGGACGTTGTAGGGAAGGAAAAGTCGAAGAAGCCCGTGAACTTTTCGATGAGATGAAGAGAAGAGGAATTAAGCCTGACCATGTTAGCTTCAATACACTGATAAGTGGTTATAGTCGACGAGGCGACGTAAAGGATGCTTTCAGAGTACGGGATGAGATGCTCGATAAAGGATTCAATCCTACTCTTCTAACTTATAACGCCCTTATACAAGGGTTATTCAAAAACCAAGAAGGTCATCATGCTGAAGAGCTGCTCAAAGAAATGGTAAGTAAAGGTATTACTCCCGATGATAGCACTTATTTCTCATTGATTGAAGGTATTACTAAAGTTAATAGTCCTGTTGAAACTTAG

mRNA sequence

ATGAATCGTTACAAAATTCTGAAGCTTTCTTCGTTGAATTTCCAAGCAACCACTAATTCCCAATCCTTCGCACTTTTCTCTTCGATTTCTCCCCATAAAACACCACCAGATTCTCAATTTCCATCTCCCAATTCAACCACAAAAGCCAATTCGACTCTAACCCAGAATTCTCTCGAGAAATTCGCCCGGTCCTCTCAGTGGCATTTCATCAAACAGGTTGAATCCACTCTGACTCCGTCGCTTATTTCCGATACCCTTCAAAATCTTCACGATTCTCCACAAATTGTTCTCGAATTGTTAAACCATTTACAACATGGATTACTTGATTCTCGAACCCATTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCACTTTACAGCTTCTAAAACAAGCTGTTGGGTGTGGCACTAATTCAGTTAAGGAGATTTTTGAATTGTTAGCGGCTTCTCGTGATCAATTGGGTGTTAAAAGCAGTATTGTTTTTGATTACTTGATTAAGTCCTGTTGCGAATTGAATAGGGCAGATGAAGCTTTTGAGTGTTTTTACATGATGAAGGAAAAGGGTGTTGCACCCAAGATTGAGACCTGCAATGATTTGCTGAGTTTGTTTCTTAAGTTGAATAGAACTGAAACAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGGATAAAATCTAGCGTTTATACATTTAACATAATGATCAATGTTCTATGCAAGGAGGGGAAGTTGAAGAAGGCTAAGGATTTTATTGAGCATATGGAATGCTTAGGGGTTAAACCGAATGTTGTTACGTATAATACAATTGTTCATGGATATTGTTCGAGAGGGAGAGTTGAAGGGGCTGATGCTATTTTGAGTACTATGAAAAGGAAAAATATTCGACCTGATTCTTACACATATGGATCTCTAATCAGCGGAATGTGCAAGCAAGGACGACTTGAAGAAGCGTCGAAGATTTTTGAAGAAATGGTACAAAATGGGTTACTTCCTAGTGCTGTAACTTATAATACTTTGATTGATGGATTTTGCAATAAGGGTAATTTGGATATGGCCTTTGGTTATAAGGATGAAATGATGAAGAAGGGCATAATGCCGACTGTATCAACGTATAACTTGTTGATTCATGCATTGTTTATGGAGCAAAAATATGATGAAGCTGAAGGTATGATCAAGGAAATTCACGAGAAAGGTATTGCTCCCGATGCTATTACGTATAATATCTTGATCAATGGGTATTGTAGATGTGGAAATGCAAAGAAAGCATTTCGTCTGCACGACGAAATGTTGGCGAGTGGCATTCGGCCAACGAAAGTGACATACACATCACTAATTCATGTTTTGAGCAAAAAGAATAGAATAAAGGAGGCAGATGATTTGTTTAAAAAGATCACAAGTAAAGGTATGTTGCCCGATGTCATTATGTTTAATGCTTTGATAGATGGTCATTGCTCAAACGGTAATGTGGAGCGTGCGTTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCGTCCCGATGAAGTGACTTTCAATACAATAATGCAAGGACGTTGTAGGGAAGGAAAAGTCGAAGAAGCCCGTGAACTTTTCGATGAGATGAAGAGAAGAGGAATTAAGCCTGACCATGTTAGCTTCAATACACTGATAAGTGGTTATAGTCGACGAGGCGACGTAAAGGATGCTTTCAGAGTACGGGATGAGATGCTCGATAAAGGATTCAATCCTACTCTTCTAACTTATAACGCCCTTATACAAGGGTTATTCAAAAACCAAGAAGGTCATCATGCTGAAGAGCTGCTCAAAGAAATGGTAAGTAAAGGTATTACTCCCGATGATAGCACTTATTTCTCATTGATTGAAGGTATTACTAAAGTTAATAGTCCTGTTGAAACTTAG

Coding sequence (CDS)

ATGAATCGTTACAAAATTCTGAAGCTTTCTTCGTTGAATTTCCAAGCAACCACTAATTCCCAATCCTTCGCACTTTTCTCTTCGATTTCTCCCCATAAAACACCACCAGATTCTCAATTTCCATCTCCCAATTCAACCACAAAAGCCAATTCGACTCTAACCCAGAATTCTCTCGAGAAATTCGCCCGGTCCTCTCAGTGGCATTTCATCAAACAGGTTGAATCCACTCTGACTCCGTCGCTTATTTCCGATACCCTTCAAAATCTTCACGATTCTCCACAAATTGTTCTCGAATTGTTAAACCATTTACAACATGGATTACTTGATTCTCGAACCCATTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCACTTTACAGCTTCTAAAACAAGCTGTTGGGTGTGGCACTAATTCAGTTAAGGAGATTTTTGAATTGTTAGCGGCTTCTCGTGATCAATTGGGTGTTAAAAGCAGTATTGTTTTTGATTACTTGATTAAGTCCTGTTGCGAATTGAATAGGGCAGATGAAGCTTTTGAGTGTTTTTACATGATGAAGGAAAAGGGTGTTGCACCCAAGATTGAGACCTGCAATGATTTGCTGAGTTTGTTTCTTAAGTTGAATAGAACTGAAACAGCTTGGGTTTTGTATGCTGAGATGTTTAGATTGAGGATAAAATCTAGCGTTTATACATTTAACATAATGATCAATGTTCTATGCAAGGAGGGGAAGTTGAAGAAGGCTAAGGATTTTATTGAGCATATGGAATGCTTAGGGGTTAAACCGAATGTTGTTACGTATAATACAATTGTTCATGGATATTGTTCGAGAGGGAGAGTTGAAGGGGCTGATGCTATTTTGAGTACTATGAAAAGGAAAAATATTCGACCTGATTCTTACACATATGGATCTCTAATCAGCGGAATGTGCAAGCAAGGACGACTTGAAGAAGCGTCGAAGATTTTTGAAGAAATGGTACAAAATGGGTTACTTCCTAGTGCTGTAACTTATAATACTTTGATTGATGGATTTTGCAATAAGGGTAATTTGGATATGGCCTTTGGTTATAAGGATGAAATGATGAAGAAGGGCATAATGCCGACTGTATCAACGTATAACTTGTTGATTCATGCATTGTTTATGGAGCAAAAATATGATGAAGCTGAAGGTATGATCAAGGAAATTCACGAGAAAGGTATTGCTCCCGATGCTATTACGTATAATATCTTGATCAATGGGTATTGTAGATGTGGAAATGCAAAGAAAGCATTTCGTCTGCACGACGAAATGTTGGCGAGTGGCATTCGGCCAACGAAAGTGACATACACATCACTAATTCATGTTTTGAGCAAAAAGAATAGAATAAAGGAGGCAGATGATTTGTTTAAAAAGATCACAAGTAAAGGTATGTTGCCCGATGTCATTATGTTTAATGCTTTGATAGATGGTCATTGCTCAAACGGTAATGTGGAGCGTGCGTTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCGTCCCGATGAAGTGACTTTCAATACAATAATGCAAGGACGTTGTAGGGAAGGAAAAGTCGAAGAAGCCCGTGAACTTTTCGATGAGATGAAGAGAAGAGGAATTAAGCCTGACCATGTTAGCTTCAATACACTGATAAGTGGTTATAGTCGACGAGGCGACGTAAAGGATGCTTTCAGAGTACGGGATGAGATGCTCGATAAAGGATTCAATCCTACTCTTCTAACTTATAACGCCCTTATACAAGGGTTATTCAAAAACCAAGAAGGTCATCATGCTGAAGAGCTGCTCAAAGAAATGGTAAGTAAAGGTATTACTCCCGATGATAGCACTTATTTCTCATTGATTGAAGGTATTACTAAAGTTAATAGTCCTGTTGAAACTTAG

Protein sequence

MNRYKILKLSSLNFQATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNHLQHGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGITKVNSPVET
Homology
[Close]
BLAST of Cp4.1LG15g05090 vs. Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3 SV=1)

HSP 1 Score: 707.6 bits (1825), Expect = 1.2e-202
Identity = 348/631 (55.15%), Postives = 460/631 (72.90%), Query Frame = 1 

Query: 3   RYKILKLSSLNFQATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFA 62
           R++I  LS   +     S + A  SS++   TP +S  P           +T   L +  
Sbjct: 11  RHRISILSGAGY-----SPAAARLSSLAQTSTP-ESVLPP----------ITSEILLESI 70

Query: 63  RSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNHLQHGLLDSRTHCLAIVIVAR 122
           RSSQWH ++ V   LTPSL+S TL +L  +P +    +NH+    LD +T CLAI ++++
Sbjct: 71  RSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVISK 130

Query: 123 LPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEA 182
           L SPKP  QLLK+ V    NS++ +F+ L  + D+L  KS+I+FD L++ CC+L   DEA
Sbjct: 131 LSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEA 190

Query: 183 FECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINV 242
            ECFY+MKEKG  PK ETCN +L+L  +LNR E AWV YA+M+R+ IKS+VYTFNIMINV
Sbjct: 191 IECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINV 250

Query: 243 LCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPD 302
           LCKEGKLKKAK F+  ME  G+KP +VTYNT+V G+  RGR+EGA  I+S MK K  +PD
Sbjct: 251 LCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPD 310

Query: 303 SYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKD 362
             TY  ++S MC +GR   AS++  EM + GL+P +V+YN LI G  N G+L+MAF Y+D
Sbjct: 311 MQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 370

Query: 363 EMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCG 422
           EM+K+G++PT  TYN LIH LFME K + AE +I+EI EKGI  D++TYNILINGYC+ G
Sbjct: 371 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 430

Query: 423 NAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFN 482
           +AKKAF LHDEM+  GI+PT+ TYTSLI+VL +KN+ +EAD+LF+K+  KGM PD++M N
Sbjct: 431 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 490

Query: 483 ALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRR 542
            L+DGHC+ GN++RAF LLK+MD M + PD+VT+N +M+G C EGK EEAREL  EMKRR
Sbjct: 491 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 550

Query: 543 GIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHA 602
           GIKPDH+S+NTLISGYS++GD K AF VRDEML  GFNPTLLTYNAL++GL KNQEG  A
Sbjct: 551 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 610

Query: 603 EELLKEMVSKGITPDDSTYFSLIEGITKVNS 634
           EELL+EM S+GI P+DS++ S+IE ++ +++
Sbjct: 611 EELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622

[Close]
BLAST of Cp4.1LG15g05090 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 9.4e-94
Identity = 167/485 (34.43%), Postives = 278/485 (57.32%), Query Frame = 1 

Query: 146 EIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLL 205
           EI   L ++    G   S VFD LI++  +  +  EA E F +++ KG    I+ CN L+
Sbjct: 149 EIVNSLDSTFSNCGSNDS-VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALI 208

Query: 206 SLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVK 265
              +++   E AW +Y E+ R  +  +VYT NIM+N LCK+GK++K   F+  ++  GV 
Sbjct: 209 GSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY 268

Query: 266 PNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKI 325
           P++VTYNT++  Y S+G +E A  +++ M  K   P  YTY ++I+G+CK G+ E A ++
Sbjct: 269 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 328

Query: 326 FEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFM 385
           F EM+++GL P + TY +L+   C KG++        +M  + ++P +  ++ ++     
Sbjct: 329 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 388

Query: 386 EQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVT 445
               D+A      + E G+ PD + Y ILI GYCR G    A  L +EML  G     VT
Sbjct: 389 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 448

Query: 446 YTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMD 505
           Y +++H L K+  + EAD LF ++T + + PD      LIDGHC  GN++ A EL + M 
Sbjct: 449 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 508

Query: 506 RMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVK 565
             ++R D VT+NT++ G  + G ++ A+E++ +M  + I P  +S++ L++    +G + 
Sbjct: 509 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 568

Query: 566 DAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLI 625
           +AFRV DEM+ K   PT++  N++I+G  ++      E  L++M+S+G  PD  +Y +LI
Sbjct: 569 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 628

Query: 626 EGITK 631
            G  +
Sbjct: 629 YGFVR 632

[Close]
BLAST of Cp4.1LG15g05090 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 4.1e-89
Identity = 166/497 (33.40%), Postives = 288/497 (57.95%), Query Frame = 1 

Query: 141 TNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIET 200
           T+S  + F+LL  +    G     VFD   +   +     EA   F  M   G+   +++
Sbjct: 154 TDSFVQFFDLLVYTYKDWG-SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDS 213

Query: 201 CNDLLSLFLK-LNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHM 260
           CN  L+   K   +T TA +++ E   + +  +V ++NI+I+ +C+ G++K+A   +  M
Sbjct: 214 CNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM 273

Query: 261 ECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRL 320
           E  G  P+V++Y+T+V+GYC  G ++    ++  MKRK ++P+SY YGS+I  +C+  +L
Sbjct: 274 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 333

Query: 321 EEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLL 380
            EA + F EM++ G+LP  V Y TLIDGFC +G++  A  +  EM  + I P V TY  +
Sbjct: 334 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 393

Query: 381 IHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGI 440
           I          EA  +  E+  KG+ PD++T+  LINGYC+ G+ K AFR+H+ M+ +G 
Sbjct: 394 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 453

Query: 441 RPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFE 500
            P  VTYT+LI  L K+  +  A++L  ++   G+ P++  +N++++G C +GN+E A +
Sbjct: 454 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 513

Query: 501 LLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYS 560
           L+ + +   +  D VT+ T+M   C+ G++++A+E+  EM  +G++P  V+FN L++G+ 
Sbjct: 514 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 573

Query: 561 RRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDS 620
             G ++D  ++ + ML KG  P   T+N+L++          A  + K+M S+G+ PD  
Sbjct: 574 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 633

Query: 621 TYFSLIEGITKVNSPVE 637
           TY +L++G  K  +  E
Sbjct: 634 TYENLVKGHCKARNMKE 649

[Close]
BLAST of Cp4.1LG15g05090 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.2e-86
Identity = 176/595 (29.58%), Postives = 321/595 (53.95%), Query Frame = 1 

Query: 42  SPNSTTKANSTLTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLN 101
           SP+ +  A+  LT      F +   +  +  + +  TP   S+ L    +   ++L+ LN
Sbjct: 18  SPSDSLLADKALT------FLKRHPYQ-LHHLSANFTPEAASNLLLKSQNDQALILKFLN 77

Query: 102 HLQ-HGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGT---NSVKEIFELLAASRDQ 161
               H     R  C+ + I+ +    K T Q+L + V   T        +F+ L  + D 
Sbjct: 78  WANPHQFFTLRCKCITLHILTKFKLYK-TAQILAEDVAAKTLDDEYASLVFKSLQETYD- 137

Query: 162 LGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTET- 221
           L   +S VFD ++KS   L+  D+A    ++ +  G  P + + N +L   ++  R  + 
Sbjct: 138 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 197

Query: 222 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVH 281
           A  ++ EM   ++  +V+T+NI+I   C  G +  A    + ME  G  PNVVTYNT++ 
Sbjct: 198 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 257

Query: 282 GYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLP 341
           GYC   +++    +L +M  K + P+  +Y  +I+G+C++GR++E S +  EM + G   
Sbjct: 258 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 317

Query: 342 SAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMI 401
             VTYNTLI G+C +GN   A     EM++ G+ P+V TY  LIH++      + A   +
Sbjct: 318 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 377

Query: 402 KEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKK 461
            ++  +G+ P+  TY  L++G+ + G   +A+R+  EM  +G  P+ VTY +LI+     
Sbjct: 378 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 437

Query: 462 NRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTF 521
            ++++A  + + +  KG+ PDV+ ++ ++ G C + +V+ A  + ++M    ++PD +T+
Sbjct: 438 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 497

Query: 522 NTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLD 581
           ++++QG C + + +EA +L++EM R G+ PD  ++  LI+ Y   GD++ A ++ +EM++
Sbjct: 498 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 557

Query: 582 KGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGITKV 632
           KG  P ++TY+ LI GL K      A+ LL ++  +   P D TY +LIE  + +
Sbjct: 558 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603

[Close]
BLAST of Cp4.1LG15g05090 vs. Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.7e-85
Identity = 164/496 (33.06%), Postives = 275/496 (55.44%), Query Frame = 1 

Query: 139 CGTNSVKEIFELLAASRDQLG-VKSSIVFDYLIKSCCELNRADEAFECFYMMKEK---GV 198
           C      +  +++     +LG + +   ++ L+K  C+ NR+ EA E  +MM +    G 
Sbjct: 133 CADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS 192

Query: 199 APKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKD 258
            P + +   +++ F K   ++ A+  Y EM    I   V T+N +I  LCK   + KA +
Sbjct: 193 PPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAME 252

Query: 259 FIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMC 318
            +  M   GV P+ +TYN+I+HGYCS G+ + A   L  M+   + PD  TY  L+  +C
Sbjct: 253 VLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLC 312

Query: 319 KQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVS 378
           K GR  EA KIF+ M + GL P   TY TL+ G+  KG L    G  D M++ GI P   
Sbjct: 313 KNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHY 372

Query: 379 TYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEM 438
            +++LI A   + K D+A  +  ++ ++G+ P+A+TY  +I   C+ G  + A    ++M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 439 LASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNV 498
           +  G+ P  + Y SLIH L   N+ + A++L  ++  +G+  + I FN++ID HC  G V
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 499 ERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTL 558
             + +L + M R+ V+P+ +T+NT++ G C  GK++EA +L   M   G+KP+ V+++TL
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552

Query: 559 ISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGI 618
           I+GY +   ++DA  +  EM   G +P ++TYN ++QGLF+ +    A+EL   +   G 
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612

Query: 619 TPDDSTYFSLIEGITK 631
             + STY  ++ G+ K
Sbjct: 613 QIELSTYNIILHGLCK 628

[Close]
BLAST of Cp4.1LG15g05090 vs. TrEMBL
Match: D7STD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00970 PE=4 SV=1)

HSP 1 Score: 867.5 bits (2240), Expect = 1.0e-248
Identity = 424/595 (71.26%), Postives = 502/595 (84.37%), Query Frame = 1 

Query: 44  NSTTKANST--LTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLN 103
           NS   + ST  +T+  + K   SSQWHFI+QV   LTP+LIS+ L NL   PQ+V + ++
Sbjct: 36  NSLASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIH 95

Query: 104 HLQHGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVK 163
           HL    LD++++CLA+V++ARLPSPK  LQLLKQ +G    + +E+F+ L  SRD+L VK
Sbjct: 96  HLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVK 155

Query: 164 SSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLY 223
           SSIVFD L++ CCEL RADEAF+CFYMMKEKG+ PKIETCND+LSLFLKLNR E AWVLY
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 224 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSR 283
           AEMFRLRI S+VYTFNIM+NVLCKEGKLKKA++FI  ME LG KPNVV+YNTI+HGY SR
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 284 GRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTY 343
           G +EGA  IL  M+ K I PDSYTYGSLISGMCK+GRLEEAS +F++MV+ GL+P+AVTY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 344 NTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHE 403
           NTLIDG+CNKG+L+ AF Y+DEM+KKGIMP+VSTYNLL+HALFME +  EA+ MIKE+ +
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 404 KGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKE 463
           KGI PDAITYNILINGY RCGNAKKAF LH+EML+ GI PT VTYTSLI+VLS++NR+KE
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455

Query: 464 ADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQ 523
           ADDLF+KI  +G+ PDVIMFNA++DGHC+NGNVERAF LLK+MDR  V PDEVTFNT+MQ
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 515

Query: 524 GRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNP 583
           GRCREGKVEEAR L DEMKRRGIKPDH+S+NTLISGY RRGD+KDAFRVRDEML  GFNP
Sbjct: 516 GRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575

Query: 584 TLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGITKVNSPVE 637
           TLLTYNALI+ L KNQEG  AEELLKEMV+KGI+PDDSTY SLIEG+  V++ VE
Sbjct: 576 TLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630

[Close]
BLAST of Cp4.1LG15g05090 vs. TrEMBL
Match: B9RZG0_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0939010 PE=4 SV=1)

HSP 1 Score: 859.8 bits (2220), Expect = 2.2e-246
Identity = 418/594 (70.37%), Postives = 493/594 (83.00%), Query Frame = 1 

Query: 43  PNSTTKANSTLTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNH 102
           PN++T +   +T  SL    +SSQWH IK +   L+PSLIS TL +LH    + L+ + H
Sbjct: 46  PNASTDSPLVITHQSLLDSIQSSQWHLIKHLAPNLSPSLISATLLSLHKKSDLALQFVTH 105

Query: 103 LQHGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVKS 162
           +    LD +T CLA+ +V+R PSPK TL LLKQ +      VK++F  LA +RD+LG KS
Sbjct: 106 IGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVAGVKDVFHELAITRDRLGTKS 165

Query: 163 SIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYA 222
           SIVFD LI++CCEL R D+AFECF MMKEKGV PKIET N +LSLFLKLN+TET WVLYA
Sbjct: 166 SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225

Query: 223 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRG 282
           EMFRL+IKS+VYTFNIMINVLCKEGKLKKAKDFI  ME LGVKPNVVTYNT++HGYCSRG
Sbjct: 226 EMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRG 285

Query: 283 RVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYN 342
           RVEGA  +L  MK + + PDSYTYGSLISGMCK G+LEEAS I E+M + GLLP+AVTYN
Sbjct: 286 RVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYN 345

Query: 343 TLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEK 402
           TLIDG+CNKG+L  AFGY+DEM+++ I+PTVSTYNLLIHALF+E K DEA+GMIK++ + 
Sbjct: 346 TLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDS 405

Query: 403 GIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEA 462
           GI PD+ITYNILINGYCRCGNAKKAF LHDEM++ GI+PT VTYTSLI+VLSK+NR+K A
Sbjct: 406 GIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAA 465

Query: 463 DDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQG 522
           DDLF+KI  +G  PD+IMFNALIDGHC+NGN++RAF LLK+MD+  + PDEVT+NT+MQG
Sbjct: 466 DDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQG 525

Query: 523 RCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPT 582
           RCREGKVEEAREL  EMKRRGI+PDH+S+NTLISGYS+RGD+ DAF +RDEML  GFNPT
Sbjct: 526 RCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPT 585

Query: 583 LLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGITKVNSPVE 637
           LLTYNALIQGL KNQ+G  AEELLKEMVSKGITPDDSTYFSLIEGI KV+   E
Sbjct: 586 LLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639

[Close]
BLAST of Cp4.1LG15g05090 vs. TrEMBL
Match: V4SC21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030406mg PE=4 SV=1)

HSP 1 Score: 855.5 bits (2209), Expect = 4.1e-245
Identity = 409/623 (65.65%), Postives = 504/623 (80.90%), Query Frame = 1 

Query: 16  ATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFARSSQWHFIKQVES 75
           +T  S S  LFSS    +    +Q   PN++      +T   L  +  SSQWHFIKQ+  
Sbjct: 20  STNQSNSCLLFSSTPQPRPTQQTQTFIPNTSGGNLPEITSELLNSYIHSSQWHFIKQLAP 79

Query: 76  TLTPSLISDTLQNLHDSPQIVLELLNHLQ-HGLLDSRTHCLAIVIVARLPSPKPTLQLLK 135
            +TPSLI+  L +LH +P +  + +NHL    + D +T C AI +++RL + KPTLQLLK
Sbjct: 80  KITPSLITSALLDLHKNPDLAFQFINHLGFRRIRDIKTRCFAIAVISRLSTSKPTLQLLK 139

Query: 136 QAVGCGTNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGV 195
           + +  G  +++ +F  LA +RD+L ++SS VFD+L++ CCEL R D+AF+CFYMMKEKG 
Sbjct: 140 ETLNSGIATIQVVFNELAVARDELRIRSSTVFDFLLRVCCELKRDDDAFKCFYMMKEKGF 199

Query: 196 APKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKD 255
            PKIE+CND+LS+F+KLNR   AWVLYAEMFR+RIKSSV TFNIMIN+LCKEGKL+KAKD
Sbjct: 200 VPKIESCNDMLSMFVKLNRPYKAWVLYAEMFRMRIKSSVCTFNIMINLLCKEGKLQKAKD 259

Query: 256 FIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMC 315
           F+  ME LG+KPN+VTYNTIVHGYC  GR+EGA  +L+ MK + ++PDSYTYGS +SGMC
Sbjct: 260 FLGFMESLGIKPNIVTYNTIVHGYCLSGRIEGARLVLNAMKSRGVQPDSYTYGSFVSGMC 319

Query: 316 KQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVS 375
           K+GRLEEAS++ E+M +NGL+P+AVTYNTLIDG+CNKGNL+MAF ++DEM+K+GIMPT S
Sbjct: 320 KEGRLEEASRMLEQMKENGLVPTAVTYNTLIDGYCNKGNLEMAFSFRDEMVKQGIMPTAS 379

Query: 376 TYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEM 435
           TYNLLIH L ME+K  EA+ M+KE+ EKGI PD+ITYNILINGYCRCGNAKKAF LHDEM
Sbjct: 380 TYNLLIHELLMERKMVEADDMLKEMGEKGIVPDSITYNILINGYCRCGNAKKAFSLHDEM 439

Query: 436 LASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNV 495
           +  GI+PT +TYTSLI VLSK+NR+ EAD LF+   +KGMLPD++MFNALIDGHC+NGN+
Sbjct: 440 IHKGIQPTMLTYTSLIFVLSKQNRMIEADQLFENFLAKGMLPDIVMFNALIDGHCTNGNI 499

Query: 496 ERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTL 555
           ERAF LLK+MDRMKV PDEVT+NT+M GRCR+GKVEEAR L D+MKRRGIKPDH+S+NTL
Sbjct: 500 ERAFSLLKEMDRMKVHPDEVTYNTLMHGRCRQGKVEEARRLLDQMKRRGIKPDHISYNTL 559

Query: 556 ISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGI 615
           ISGYS+RGD+KDAFRVRDEML  GFNPT LTYNALIQGL KNQEG  AEELL+EMVSKGI
Sbjct: 560 ISGYSKRGDMKDAFRVRDEMLSVGFNPTRLTYNALIQGLCKNQEGDLAEELLREMVSKGI 619

Query: 616 TPDDSTYFSLIEGITKVNSPVET 638
           TPDD+TYFSLIEGI  V+   E+
Sbjct: 620 TPDDNTYFSLIEGIASVDKAAES 642

[Close]
BLAST of Cp4.1LG15g05090 vs. TrEMBL
Match: A0A067LCI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10026 PE=4 SV=1)

HSP 1 Score: 847.0 bits (2187), Expect = 1.4e-242
Identity = 419/637 (65.78%), Postives = 506/637 (79.43%), Query Frame = 1 

Query: 1   MNRYKIL--------KLSSLNFQATTNSQSFALFSSI-SPHKTPPDSQFPSPNSTTKANS 60
           M  YK+L        KL+     A      ++L SS  SP+   P ++    N +T +  
Sbjct: 1   MGPYKVLNSQMLAHSKLNPAFVTAPYQLHCYSLLSSTPSPNTDHPQTRKIYANFSTTSPP 60

Query: 61  TLTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNHLQHGLLDSR 120
             T   L K  +SS+WHFIK +  +LTPSL+S TL +L   P + L+   H++   LD +
Sbjct: 61  VTTHQELLKSIQSSRWHFIKHLAPSLTPSLVSATLLSLQKKPDLALQFTTHIEFNSLDIK 120

Query: 121 THCLAIVIVARLPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVKSSIVFDYLIK 180
           T CLAI +++  PSPK +LQLLKQ +     +V+++F  L ++ DQL  KSSI+FD LI+
Sbjct: 121 TKCLAIAVISPSPSPKASLQLLKQTISSNIATVEDVFNELESALDQLNTKSSILFDLLIR 180

Query: 181 SCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKS 240
           +CCE+ R D AF CF MMK+KG  PKIETCND+LSLFLKLNRT+ AWVLYAEMFRLRI+S
Sbjct: 181 ACCEMKRGDNAFMCFDMMKKKGTVPKIETCNDMLSLFLKLNRTDVAWVLYAEMFRLRIQS 240

Query: 241 SVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAIL 300
           +VYTFNIMINVLCKEGKLKKAK+FI  ME LGVKPNVVTYNTI+HGYC RGRVEGA  IL
Sbjct: 241 TVYTFNIMINVLCKEGKLKKAKEFIGFMESLGVKPNVVTYNTIIHGYCWRGRVEGARMIL 300

Query: 301 STMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNK 360
             MK K I PDSYTYGSLISGMCK+GRLEEAS + E+M + GL P+AVTYNTLIDG+CNK
Sbjct: 301 DVMKTKGIEPDSYTYGSLISGMCKEGRLEEASGLLEKMKEIGLRPNAVTYNTLIDGYCNK 360

Query: 361 GNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITY 420
           GNL+ AFGY++EM+++GI+PTVSTYNLLIHALF+E K DEA+ MIK + EKGI PD+ITY
Sbjct: 361 GNLEKAFGYRNEMVERGILPTVSTYNLLIHALFLEGKMDEADDMIKNMGEKGIFPDSITY 420

Query: 421 NILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITS 480
           NILINGYCRCGNAKKAF LH+EM+  GI+PT++TYTSLI+VL+K+NR++EAD+LF+ I  
Sbjct: 421 NILINGYCRCGNAKKAFSLHNEMVGKGIQPTRITYTSLIYVLNKRNRMREADNLFENIVR 480

Query: 481 KGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEE 540
           KG+ PD+IMFNALIDGHC+NGN++RAF LLK+MD  KV PDEVT+NT+M+GRCREGKVEE
Sbjct: 481 KGVFPDLIMFNALIDGHCANGNIDRAFALLKEMDTRKVFPDEVTYNTLMRGRCREGKVEE 540

Query: 541 ARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQ 600
           AR+L +EMK RGIKPDH+S+NTLISGYSRRGD+ DAF+VRDEML  GFNPTLLTYNALIQ
Sbjct: 541 ARKLLEEMKSRGIKPDHISYNTLISGYSRRGDMNDAFKVRDEMLSIGFNPTLLTYNALIQ 600

Query: 601 GLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGI 629
           GL KNQEG HAEELLKEMVSKGI PDDSTY SLIE +
Sbjct: 601 GLCKNQEGQHAEELLKEMVSKGIAPDDSTYISLIEAM 637

[Close]
BLAST of Cp4.1LG15g05090 vs. TrEMBL
Match: A0A061DYS1_THECC (Pentatricopeptide repeat (PPR) superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_006286 PE=4 SV=1)

HSP 1 Score: 842.4 bits (2175), Expect = 3.6e-241
Identity = 406/613 (66.23%), Postives = 500/613 (81.57%), Query Frame = 1 

Query: 28  SISPHKTP---PDSQFPSPNSTTKANSTLTQNSLEKFARSSQWHFIKQVESTLTPSLISD 87
           ++ PH +      SQ  + + +  A+S ++   L +  RSSQWHFIK   S L PS+IS 
Sbjct: 34  TVIPHSSALCSSTSQLVTSDQSQTASSQISPELLIESVRSSQWHFIKHQSSDLNPSVIST 93

Query: 88  TLQNLHDSPQIVLELLNHLQHGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGTNSV 147
            L NLH +P++ L+  +H++   LD +T CLAI + +RLPSPKPTLQLLKQ +     SV
Sbjct: 94  VLLNLHKTPELALQFTSHIEFQRLDVKTRCLAIAVASRLPSPKPTLQLLKQTIYSDIASV 153

Query: 148 KEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDL 207
             IF+ LA +RD+LG+ ++I+FD LI++CCE+ R DE  ECFYMMK+KG+ PKIETCND+
Sbjct: 154 TVIFDELALARDRLGISTTILFDLLIRACCEMKRVDEGLECFYMMKDKGLIPKIETCNDM 213

Query: 208 LSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGV 267
           LS FLKLNRTE+AWVLYAEMF++RIKSS+YTFNIMINVLCKEGKLKKAK+F+  ME L V
Sbjct: 214 LSTFLKLNRTESAWVLYAEMFKMRIKSSIYTFNIMINVLCKEGKLKKAKEFVNFMENLAV 273

Query: 268 KPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASK 327
           KPNVVTYNT++H YCSRGRVEGA  +L+ M+ K I  DSYTY SLISGMCK+ RLEEAS+
Sbjct: 274 KPNVVTYNTLIHAYCSRGRVEGARLVLNAMRSKGIELDSYTYSSLISGMCKEKRLEEASE 333

Query: 328 IFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALF 387
           +FE+M + GL+PSA+TYNTLIDG+CN G+L+ AFGY+DEM+++GI+PTVSTYNLL+HALF
Sbjct: 334 MFEKMKEMGLVPSAITYNTLIDGYCNYGDLEKAFGYRDEMVERGILPTVSTYNLLVHALF 393

Query: 388 MEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKV 447
           ME K  +A+ ++KE+ EKG+  D ITYNILINGY RCGN KKAF  HDEML  GI+PT+V
Sbjct: 394 MECKMGQADDLVKEMREKGLVADEITYNILINGYSRCGNVKKAFSFHDEMLTKGIQPTQV 453

Query: 448 TYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDM 507
           TYTSLI VLS++NR+KEADDLF+KI SKG+  DV+MFNALIDGHC+NGN+ERAF LLK M
Sbjct: 454 TYTSLIFVLSRRNRMKEADDLFEKIMSKGVAVDVVMFNALIDGHCANGNMERAFSLLKKM 513

Query: 508 DRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDV 567
           D++ V PD+VT+NT+MQG CR+G+VEEAREL DEMKRRGIKPDHVS+N LISGYSR+G++
Sbjct: 514 DKLNVSPDDVTYNTLMQGHCRKGRVEEARELLDEMKRRGIKPDHVSYNILISGYSRKGEM 573

Query: 568 KDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSL 627
           KDA RVRDEML  GFNPTLLTYNALIQG  KNQEG  AE+LLKEMVSKGITPDDSTY SL
Sbjct: 574 KDALRVRDEMLSIGFNPTLLTYNALIQGFCKNQEGDLAEDLLKEMVSKGITPDDSTYLSL 633

Query: 628 IEGITKVNSPVET 638
           IEG+  ++  VE+
Sbjct: 634 IEGMGTIDHSVES 646

[Close]
BLAST of Cp4.1LG15g05090 vs. TAIR10
Match: AT2G15630.1 (AT2G15630.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 707.6 bits (1825), Expect = 6.9e-204
Identity = 348/631 (55.15%), Postives = 460/631 (72.90%), Query Frame = 1 

Query: 3   RYKILKLSSLNFQATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFA 62
           R++I  LS   +     S + A  SS++   TP +S  P           +T   L +  
Sbjct: 11  RHRISILSGAGY-----SPAAARLSSLAQTSTP-ESVLPP----------ITSEILLESI 70

Query: 63  RSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNHLQHGLLDSRTHCLAIVIVAR 122
           RSSQWH ++ V   LTPSL+S TL +L  +P +    +NH+    LD +T CLAI ++++
Sbjct: 71  RSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVISK 130

Query: 123 LPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEA 182
           L SPKP  QLLK+ V    NS++ +F+ L  + D+L  KS+I+FD L++ CC+L   DEA
Sbjct: 131 LSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEA 190

Query: 183 FECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINV 242
            ECFY+MKEKG  PK ETCN +L+L  +LNR E AWV YA+M+R+ IKS+VYTFNIMINV
Sbjct: 191 IECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINV 250

Query: 243 LCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPD 302
           LCKEGKLKKAK F+  ME  G+KP +VTYNT+V G+  RGR+EGA  I+S MK K  +PD
Sbjct: 251 LCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPD 310

Query: 303 SYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKD 362
             TY  ++S MC +GR   AS++  EM + GL+P +V+YN LI G  N G+L+MAF Y+D
Sbjct: 311 MQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 370

Query: 363 EMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCG 422
           EM+K+G++PT  TYN LIH LFME K + AE +I+EI EKGI  D++TYNILINGYC+ G
Sbjct: 371 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 430

Query: 423 NAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFN 482
           +AKKAF LHDEM+  GI+PT+ TYTSLI+VL +KN+ +EAD+LF+K+  KGM PD++M N
Sbjct: 431 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 490

Query: 483 ALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRR 542
            L+DGHC+ GN++RAF LLK+MD M + PD+VT+N +M+G C EGK EEAREL  EMKRR
Sbjct: 491 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 550

Query: 543 GIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHA 602
           GIKPDH+S+NTLISGYS++GD K AF VRDEML  GFNPTLLTYNAL++GL KNQEG  A
Sbjct: 551 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 610

Query: 603 EELLKEMVSKGITPDDSTYFSLIEGITKVNS 634
           EELL+EM S+GI P+DS++ S+IE ++ +++
Sbjct: 611 EELLREMKSEGIVPNDSSFCSVIEAMSNLDA 622

[Close]
BLAST of Cp4.1LG15g05090 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 345.9 bits (886), Expect = 5.3e-95
Identity = 167/485 (34.43%), Postives = 278/485 (57.32%), Query Frame = 1 

Query: 146 EIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLL 205
           EI   L ++    G   S VFD LI++  +  +  EA E F +++ KG    I+ CN L+
Sbjct: 149 EIVNSLDSTFSNCGSNDS-VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALI 208

Query: 206 SLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVK 265
              +++   E AW +Y E+ R  +  +VYT NIM+N LCK+GK++K   F+  ++  GV 
Sbjct: 209 GSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY 268

Query: 266 PNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKI 325
           P++VTYNT++  Y S+G +E A  +++ M  K   P  YTY ++I+G+CK G+ E A ++
Sbjct: 269 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 328

Query: 326 FEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFM 385
           F EM+++GL P + TY +L+   C KG++        +M  + ++P +  ++ ++     
Sbjct: 329 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 388

Query: 386 EQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVT 445
               D+A      + E G+ PD + Y ILI GYCR G    A  L +EML  G     VT
Sbjct: 389 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 448

Query: 446 YTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMD 505
           Y +++H L K+  + EAD LF ++T + + PD      LIDGHC  GN++ A EL + M 
Sbjct: 449 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 508

Query: 506 RMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVK 565
             ++R D VT+NT++ G  + G ++ A+E++ +M  + I P  +S++ L++    +G + 
Sbjct: 509 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 568

Query: 566 DAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLI 625
           +AFRV DEM+ K   PT++  N++I+G  ++      E  L++M+S+G  PD  +Y +LI
Sbjct: 569 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 628

Query: 626 EGITK 631
            G  +
Sbjct: 629 YGFVR 632

[Close]
BLAST of Cp4.1LG15g05090 vs. TAIR10
Match: AT1G05670.1 (AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 330.5 bits (846), Expect = 2.3e-90
Identity = 166/497 (33.40%), Postives = 288/497 (57.95%), Query Frame = 1 

Query: 141 TNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIET 200
           T+S  + F+LL  +    G     VFD   +   +     EA   F  M   G+   +++
Sbjct: 154 TDSFVQFFDLLVYTYKDWG-SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDS 213

Query: 201 CNDLLSLFLK-LNRTETAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHM 260
           CN  L+   K   +T TA +++ E   + +  +V ++NI+I+ +C+ G++K+A   +  M
Sbjct: 214 CNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM 273

Query: 261 ECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRL 320
           E  G  P+V++Y+T+V+GYC  G ++    ++  MKRK ++P+SY YGS+I  +C+  +L
Sbjct: 274 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 333

Query: 321 EEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLL 380
            EA + F EM++ G+LP  V Y TLIDGFC +G++  A  +  EM  + I P V TY  +
Sbjct: 334 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 393

Query: 381 IHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGI 440
           I          EA  +  E+  KG+ PD++T+  LINGYC+ G+ K AFR+H+ M+ +G 
Sbjct: 394 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 453

Query: 441 RPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFE 500
            P  VTYT+LI  L K+  +  A++L  ++   G+ P++  +N++++G C +GN+E A +
Sbjct: 454 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 513

Query: 501 LLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYS 560
           L+ + +   +  D VT+ T+M   C+ G++++A+E+  EM  +G++P  V+FN L++G+ 
Sbjct: 514 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 573

Query: 561 RRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDS 620
             G ++D  ++ + ML KG  P   T+N+L++          A  + K+M S+G+ PD  
Sbjct: 574 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 633

Query: 621 TYFSLIEGITKVNSPVE 637
           TY +L++G  K  +  E
Sbjct: 634 TYENLVKGHCKARNMKE 649

[Close]
BLAST of Cp4.1LG15g05090 vs. TAIR10
Match: AT5G39710.1 (AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 319.7 bits (818), Expect = 4.1e-87
Identity = 176/595 (29.58%), Postives = 321/595 (53.95%), Query Frame = 1 

Query: 42  SPNSTTKANSTLTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLN 101
           SP+ +  A+  LT      F +   +  +  + +  TP   S+ L    +   ++L+ LN
Sbjct: 18  SPSDSLLADKALT------FLKRHPYQ-LHHLSANFTPEAASNLLLKSQNDQALILKFLN 77

Query: 102 HLQ-HGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGT---NSVKEIFELLAASRDQ 161
               H     R  C+ + I+ +    K T Q+L + V   T        +F+ L  + D 
Sbjct: 78  WANPHQFFTLRCKCITLHILTKFKLYK-TAQILAEDVAAKTLDDEYASLVFKSLQETYD- 137

Query: 162 LGVKSSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTET- 221
           L   +S VFD ++KS   L+  D+A    ++ +  G  P + + N +L   ++  R  + 
Sbjct: 138 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 197

Query: 222 AWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVH 281
           A  ++ EM   ++  +V+T+NI+I   C  G +  A    + ME  G  PNVVTYNT++ 
Sbjct: 198 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 257

Query: 282 GYCSRGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLP 341
           GYC   +++    +L +M  K + P+  +Y  +I+G+C++GR++E S +  EM + G   
Sbjct: 258 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 317

Query: 342 SAVTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMI 401
             VTYNTLI G+C +GN   A     EM++ G+ P+V TY  LIH++      + A   +
Sbjct: 318 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 377

Query: 402 KEIHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKK 461
            ++  +G+ P+  TY  L++G+ + G   +A+R+  EM  +G  P+ VTY +LI+     
Sbjct: 378 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 437

Query: 462 NRIKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTF 521
            ++++A  + + +  KG+ PDV+ ++ ++ G C + +V+ A  + ++M    ++PD +T+
Sbjct: 438 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 497

Query: 522 NTIMQGRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLD 581
           ++++QG C + + +EA +L++EM R G+ PD  ++  LI+ Y   GD++ A ++ +EM++
Sbjct: 498 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 557

Query: 582 KGFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGITKV 632
           KG  P ++TY+ LI GL K      A+ LL ++  +   P D TY +LIE  + +
Sbjct: 558 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603

[Close]
BLAST of Cp4.1LG15g05090 vs. TAIR10
Match: AT1G09820.1 (AT1G09820.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 316.6 bits (810), Expect = 3.4e-86
Identity = 165/460 (35.87%), Postives = 258/460 (56.09%), Query Frame = 1 

Query: 162 SSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLY 221
           +SI+ D L+ +    +R +  FE F      G      +C  L+   LK NR+     +Y
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211

Query: 222 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCS- 281
            EM R +I+ +V+TFN++IN LCK GK+ KA+D +E M+  G  PNVV+YNT++ GYC  
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271

Query: 282 --RGRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSA 341
              G++  ADA+L  M   ++ P+  T+  LI G  K   L  + K+F+EM+   + P+ 
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331

Query: 342 VTYNTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKE 401
           ++YN+LI+G CN G +  A   +D+M+  G+ P + TYN LI+         EA  M   
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391

Query: 402 IHEKGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNR 461
           +  +G  P    YN+LI+ YC+ G     F L +EM   GI P   TY  LI  L +   
Sbjct: 392 VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGN 451

Query: 462 IKEADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNT 521
           I+ A  LF ++TSKG LPD++ F+ L++G+C  G   +A  LLK+M +M ++P  +T+N 
Sbjct: 452 IEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 511

Query: 522 IMQGRCREGKVEEARELFDEM-KRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDK 581
           +M+G C+EG ++ A  +  +M K R ++ +  S+N L+ GYS++G ++DA  + +EML+K
Sbjct: 512 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 571

Query: 582 GFNPTLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPD 618
           G  P  +TY                E + +EMV +G  PD
Sbjct: 572 GLVPNRITY----------------EIVKEEMVDQGFVPD 594

[Close]
BLAST of Cp4.1LG15g05090 vs. NCBI nr
Match: gi|659109809|ref|XP_008454892.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1021.5 bits (2640), Expect = 6.2e-295
Identity = 520/634 (82.02%), Postives = 561/634 (88.49%), Query Frame = 1 

Query: 4   YKILKLSSLNFQATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFAR 63
           Y+I KLSSL             FSSIS H TP      SPNS+T A S LT + LE+ AR
Sbjct: 4   YRIPKLSSLKLNP---------FSSISLHNTP----LESPNSSTNAASPLTPHFLEQSAR 63

Query: 64  SSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNHLQHGLLDSRTHCLAIVIVARL 123
           SSQWHFIKQVESTLTPSLIS TL NLH SPQIVL+ LNHL H L D+ T CLAIVIVARL
Sbjct: 64  SSQWHFIKQVESTLTPSLISQTLLNLHQSPQIVLDFLNHLHHKLPDAHTLCLAIVIVARL 123

Query: 124 PSPKPTLQLLKQAVGCG-TNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEA 183
           PSPKP L LLKQA+G G TNS++EIFELLAASRD+LG KSSIVFD+LIKSCC++NRADEA
Sbjct: 124 PSPKPALHLLKQALGGGTTNSIREIFELLAASRDRLGFKSSIVFDHLIKSCCDMNRADEA 183

Query: 184 FECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINV 243
            ECFY MKEKG+ PKIETCN+LLSLFLKLNRTE AWVLYAEMFRLRIKSSVYTFNIMINV
Sbjct: 184 LECFYTMKEKGILPKIETCNNLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINV 243

Query: 244 LCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPD 303
           LCKEGKLKKAKDFI HME LGVKPNVVTYNTIVHGYC RGRVEGA AIL+TMKR+ I PD
Sbjct: 244 LCKEGKLKKAKDFIGHMETLGVKPNVVTYNTIVHGYCLRGRVEGAAAILTTMKRQKIDPD 303

Query: 304 SYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKD 363
           S+TYGSLI GMCKQGRLEEASKIFEEMVQ GL P+AV YNTLIDGFCNKGNLDMA  YKD
Sbjct: 304 SFTYGSLICGMCKQGRLEEASKIFEEMVQKGLQPNAVIYNTLIDGFCNKGNLDMASAYKD 363

Query: 364 EMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCG 423
           EM+KKGI PTVSTYN LIHALFMEQ+ DEAEGMI+EI EKGI+PDAITYNILINGYCRC 
Sbjct: 364 EMLKKGINPTVSTYNSLIHALFMEQRIDEAEGMIEEIQEKGISPDAITYNILINGYCRCA 423

Query: 424 NAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFN 483
           NAKKAFRLH+EMLASGI+PTKVTYTSLIHVLSKKNR+KEADDLFKKITS+G+LPD+IMFN
Sbjct: 424 NAKKAFRLHNEMLASGIKPTKVTYTSLIHVLSKKNRMKEADDLFKKITSEGVLPDLIMFN 483

Query: 484 ALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRR 543
           ALIDGHCSN +V+RAFELLKDMDRMKV PDEVTFNTIMQG CREGKVEEAR+LFDEMKRR
Sbjct: 484 ALIDGHCSNSDVKRAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARQLFDEMKRR 543

Query: 544 GIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHA 603
           GIKPDH+SFNTLISGYSRRGD+KDAFRV++EML+ GFNPT+LTYNALIQGL KNQEG  A
Sbjct: 544 GIKPDHISFNTLISGYSRRGDIKDAFRVQNEMLNTGFNPTVLTYNALIQGLCKNQEGDRA 603

Query: 604 EELLKEMVSKGITPDDSTYFSLIEGITKVNSPVE 637
           EELLKEMVS GI PDD+TYF+LIEGI+KVN PVE
Sbjct: 604 EELLKEMVSNGIKPDDTTYFTLIEGISKVNIPVE 624

[Close]
BLAST of Cp4.1LG15g05090 vs. NCBI nr
Match: gi|449438705|ref|XP_004137128.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucumis sativus])

HSP 1 Score: 1011.9 bits (2615), Expect = 4.9e-292
Identity = 516/633 (81.52%), Postives = 555/633 (87.68%), Query Frame = 1 

Query: 5   KILKLSSLNFQATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFARS 64
           +I KLSSL  +          FSSIS  KTP +S    P STT   S LT + LE+ ARS
Sbjct: 5   RIPKLSSLKLKP---------FSSISLQKTPLES----PVSTTNLASPLTPHFLEQSARS 64

Query: 65  SQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNHLQHGLLDSRTHCLAIVIVARLP 124
           SQWHFIKQVES+LTPSLIS TL NLH+SPQ+VL+ LNH  H L D+RT CLAIVIVARLP
Sbjct: 65  SQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLP 124

Query: 125 SPKPTLQLLKQAVGCGT-NSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEAF 184
           SPKP L LLKQA+G GT NS++EIFE LAASRD+LG KSSIVFDYLIKSCC++NRADEAF
Sbjct: 125 SPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAF 184

Query: 185 ECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINVL 244
           ECFY MKEKGV P IETCN LLSLFLKLNRTE AWVLYAEMFRLRIKSSVYTFNIMINVL
Sbjct: 185 ECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVL 244

Query: 245 CKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPDS 304
           CKEGKLKKAKDF+ HME  GVKPN+VTYNTIVHGYCS GRVE ADAIL+TMKR+ I PDS
Sbjct: 245 CKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDS 304

Query: 305 YTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKDE 364
           +TYGSLISGMCKQGRLEEASKIFEEMVQ GL PSAV YNTLIDGFCNKGNLDMA  YKDE
Sbjct: 305 FTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDE 364

Query: 365 MMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCGN 424
           M+KKGI PT+STYN LIHALFMEQ+ DEAE MIKEI EKGI+PDAITYNILINGYCRC N
Sbjct: 365 MLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCAN 424

Query: 425 AKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFNA 484
           AKKAF LHDEMLASGI+PTK TYTSL+HVLSKKNR+KEADDLFKKITS+G+LPDVIMFNA
Sbjct: 425 AKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNA 484

Query: 485 LIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRRG 544
           LIDGHCSN NV+ AFELLKDMDRMKV PDEVTFNTIMQG CREGKVEEARELFDEMKRRG
Sbjct: 485 LIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 544

Query: 545 IKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHAE 604
           IKPDH+SFNTLISGYSRRGD+KDAFRVR+EMLD GFNPT+LTYNAL+QGL KNQEG  AE
Sbjct: 545 IKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE 604

Query: 605 ELLKEMVSKGITPDDSTYFSLIEGITKVNSPVE 637
           ELLKEMVSKG+TPDD+TYF+LIEGI KVN P E
Sbjct: 605 ELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624

[Close]
BLAST of Cp4.1LG15g05090 vs. NCBI nr
Match: gi|659109811|ref|XP_008454893.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 979.5 bits (2531), Expect = 2.7e-282
Identity = 499/607 (82.21%), Postives = 537/607 (88.47%), Query Frame = 1 

Query: 4   YKILKLSSLNFQATTNSQSFALFSSISPHKTPPDSQFPSPNSTTKANSTLTQNSLEKFAR 63
           Y+I KLSSL             FSSIS H TP      SPNS+T A S LT + LE+ AR
Sbjct: 4   YRIPKLSSLKLNP---------FSSISLHNTP----LESPNSSTNAASPLTPHFLEQSAR 63

Query: 64  SSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLNHLQHGLLDSRTHCLAIVIVARL 123
           SSQWHFIKQVESTLTPSLIS TL NLH SPQIVL+ LNHL H L D+ T CLAIVIVARL
Sbjct: 64  SSQWHFIKQVESTLTPSLISQTLLNLHQSPQIVLDFLNHLHHKLPDAHTLCLAIVIVARL 123

Query: 124 PSPKPTLQLLKQAVGCG-TNSVKEIFELLAASRDQLGVKSSIVFDYLIKSCCELNRADEA 183
           PSPKP L LLKQA+G G TNS++EIFELLAASRD+LG KSSIVFD+LIKSCC++NRADEA
Sbjct: 124 PSPKPALHLLKQALGGGTTNSIREIFELLAASRDRLGFKSSIVFDHLIKSCCDMNRADEA 183

Query: 184 FECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLYAEMFRLRIKSSVYTFNIMINV 243
            ECFY MKEKG+ PKIETCN+LLSLFLKLNRTE AWVLYAEMFRLRIKSSVYTFNIMINV
Sbjct: 184 LECFYTMKEKGILPKIETCNNLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINV 243

Query: 244 LCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSRGRVEGADAILSTMKRKNIRPD 303
           LCKEGKLKKAKDFI HME LGVKPNVVTYNTIVHGYC RGRVEGA AIL+TMKR+ I PD
Sbjct: 244 LCKEGKLKKAKDFIGHMETLGVKPNVVTYNTIVHGYCLRGRVEGAAAILTTMKRQKIDPD 303

Query: 304 SYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTYNTLIDGFCNKGNLDMAFGYKD 363
           S+TYGSLI GMCKQGRLEEASKIFEEMVQ GL P+AV YNTLIDGFCNKGNLDMA  YKD
Sbjct: 304 SFTYGSLICGMCKQGRLEEASKIFEEMVQKGLQPNAVIYNTLIDGFCNKGNLDMASAYKD 363

Query: 364 EMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHEKGIAPDAITYNILINGYCRCG 423
           EM+KKGI PTVSTYN LIHALFMEQ+ DEAEGMI+EI EKGI+PDAITYNILINGYCRC 
Sbjct: 364 EMLKKGINPTVSTYNSLIHALFMEQRIDEAEGMIEEIQEKGISPDAITYNILINGYCRCA 423

Query: 424 NAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKEADDLFKKITSKGMLPDVIMFN 483
           NAKKAFRLH+EMLASGI+PTKVTYTSLIHVLSKKNR+KEADDLFKKITS+G+LPD+IMFN
Sbjct: 424 NAKKAFRLHNEMLASGIKPTKVTYTSLIHVLSKKNRMKEADDLFKKITSEGVLPDLIMFN 483

Query: 484 ALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQGRCREGKVEEARELFDEMKRR 543
           ALIDGHCSN +V+RAFELLKDMDRMKV PDEVTFNTIMQG CREGKVEEAR+LFDEMKRR
Sbjct: 484 ALIDGHCSNSDVKRAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARQLFDEMKRR 543

Query: 544 GIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNPTLLTYNALIQGLFKNQEGHHA 603
           GIKPDH+SFNTLISGYSRRGD+KDAFRV++EML+ GFNPT+LTYNALIQGL KNQEG  A
Sbjct: 544 GIKPDHISFNTLISGYSRRGDIKDAFRVQNEMLNTGFNPTVLTYNALIQGLCKNQEGDRA 597

Query: 604 EELLKEM 610
           EELLKEM
Sbjct: 604 EELLKEM 597

[Close]
BLAST of Cp4.1LG15g05090 vs. NCBI nr
Match: gi|296081530|emb|CBI20053.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 867.5 bits (2240), Expect = 1.5e-248
Identity = 424/595 (71.26%), Postives = 502/595 (84.37%), Query Frame = 1 

Query: 44  NSTTKANST--LTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLN 103
           NS   + ST  +T+  + K   SSQWHFI+QV   LTP+LIS+ L NL   PQ+V + ++
Sbjct: 36  NSLASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIH 95

Query: 104 HLQHGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVK 163
           HL    LD++++CLA+V++ARLPSPK  LQLLKQ +G    + +E+F+ L  SRD+L VK
Sbjct: 96  HLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVK 155

Query: 164 SSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLY 223
           SSIVFD L++ CCEL RADEAF+CFYMMKEKG+ PKIETCND+LSLFLKLNR E AWVLY
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 224 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSR 283
           AEMFRLRI S+VYTFNIM+NVLCKEGKLKKA++FI  ME LG KPNVV+YNTI+HGY SR
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 284 GRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTY 343
           G +EGA  IL  M+ K I PDSYTYGSLISGMCK+GRLEEAS +F++MV+ GL+P+AVTY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 344 NTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHE 403
           NTLIDG+CNKG+L+ AF Y+DEM+KKGIMP+VSTYNLL+HALFME +  EA+ MIKE+ +
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 404 KGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKE 463
           KGI PDAITYNILINGY RCGNAKKAF LH+EML+ GI PT VTYTSLI+VLS++NR+KE
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455

Query: 464 ADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQ 523
           ADDLF+KI  +G+ PDVIMFNA++DGHC+NGNVERAF LLK+MDR  V PDEVTFNT+MQ
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 515

Query: 524 GRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNP 583
           GRCREGKVEEAR L DEMKRRGIKPDH+S+NTLISGY RRGD+KDAFRVRDEML  GFNP
Sbjct: 516 GRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 575

Query: 584 TLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGITKVNSPVE 637
           TLLTYNALI+ L KNQEG  AEELLKEMV+KGI+PDDSTY SLIEG+  V++ VE
Sbjct: 576 TLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630

[Close]
BLAST of Cp4.1LG15g05090 vs. NCBI nr
Match: gi|731410547|ref|XP_002269015.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Vitis vinifera])

HSP 1 Score: 867.5 bits (2240), Expect = 1.5e-248
Identity = 424/595 (71.26%), Postives = 502/595 (84.37%), Query Frame = 1 

Query: 44  NSTTKANST--LTQNSLEKFARSSQWHFIKQVESTLTPSLISDTLQNLHDSPQIVLELLN 103
           NS   + ST  +T+  + K   SSQWHFI+QV   LTP+LIS+ L NL   PQ+V + ++
Sbjct: 62  NSLASSESTPPITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIH 121

Query: 104 HLQHGLLDSRTHCLAIVIVARLPSPKPTLQLLKQAVGCGTNSVKEIFELLAASRDQLGVK 163
           HL    LD++++CLA+V++ARLPSPK  LQLLKQ +G    + +E+F+ L  SRD+L VK
Sbjct: 122 HLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATNRELFDELTLSRDRLSVK 181

Query: 164 SSIVFDYLIKSCCELNRADEAFECFYMMKEKGVAPKIETCNDLLSLFLKLNRTETAWVLY 223
           SSIVFD L++ CCEL RADEAF+CFYMMKEKG+ PKIETCND+LSLFLKLNR E AWVLY
Sbjct: 182 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 241

Query: 224 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIEHMECLGVKPNVVTYNTIVHGYCSR 283
           AEMFRLRI S+VYTFNIM+NVLCKEGKLKKA++FI  ME LG KPNVV+YNTI+HGY SR
Sbjct: 242 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 301

Query: 284 GRVEGADAILSTMKRKNIRPDSYTYGSLISGMCKQGRLEEASKIFEEMVQNGLLPSAVTY 343
           G +EGA  IL  M+ K I PDSYTYGSLISGMCK+GRLEEAS +F++MV+ GL+P+AVTY
Sbjct: 302 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 361

Query: 344 NTLIDGFCNKGNLDMAFGYKDEMMKKGIMPTVSTYNLLIHALFMEQKYDEAEGMIKEIHE 403
           NTLIDG+CNKG+L+ AF Y+DEM+KKGIMP+VSTYNLL+HALFME +  EA+ MIKE+ +
Sbjct: 362 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 421

Query: 404 KGIAPDAITYNILINGYCRCGNAKKAFRLHDEMLASGIRPTKVTYTSLIHVLSKKNRIKE 463
           KGI PDAITYNILINGY RCGNAKKAF LH+EML+ GI PT VTYTSLI+VLS++NR+KE
Sbjct: 422 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 481

Query: 464 ADDLFKKITSKGMLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVRPDEVTFNTIMQ 523
           ADDLF+KI  +G+ PDVIMFNA++DGHC+NGNVERAF LLK+MDR  V PDEVTFNT+MQ
Sbjct: 482 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 541

Query: 524 GRCREGKVEEARELFDEMKRRGIKPDHVSFNTLISGYSRRGDVKDAFRVRDEMLDKGFNP 583
           GRCREGKVEEAR L DEMKRRGIKPDH+S+NTLISGY RRGD+KDAFRVRDEML  GFNP
Sbjct: 542 GRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNP 601

Query: 584 TLLTYNALIQGLFKNQEGHHAEELLKEMVSKGITPDDSTYFSLIEGITKVNSPVE 637
           TLLTYNALI+ L KNQEG  AEELLKEMV+KGI+PDDSTY SLIEG+  V++ VE
Sbjct: 602 TLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 656

The following BLAST results are available for this feature:
BLAST of Cp4.1LG15g05090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PP152_ARATH1.2e-20255.15Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidop... [more]
PP360_ARATH9.4e-9434.43Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN... [more]
PPR12_ARATH4.1e-8933.40Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PP407_ARATH7.2e-8629.58Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
RF1_ORYSI2.7e-8533.06Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1[more]
BLAST of Cp4.1LG15g05090 vs. TrEMBL
Match NameE-valueIdentityDescription
D7STD9_VITVI1.0e-24871.26Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00970 PE=4 SV=... [more]
B9RZG0_RICCO2.2e-24670.37Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
V4SC21_9ROSI4.1e-24565.65Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030406mg PE=4 SV=1[more]
A0A067LCI3_JATCU1.4e-24265.78Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10026 PE=4 SV=1[more]
A0A061DYS1_THECC3.6e-24166.23Pentatricopeptide repeat (PPR) superfamily protein, putative isoform 1 OS=Theobr... [more]
BLAST of Cp4.1LG15g05090 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15630.16.9e-20455.15 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G01110.15.3e-9534.43 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G05670.12.3e-9033.40 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT5G39710.14.1e-8729.58 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G09820.13.4e-8635.87 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
BLAST of Cp4.1LG15g05090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109809|ref|XP_008454892.1|6.2e-29582.02PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
gi|449438705|ref|XP_004137128.1|4.9e-29281.52PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
gi|659109811|ref|XP_008454893.1|2.7e-28282.21PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
gi|296081530|emb|CBI20053.3|1.5e-24871.26unnamed protein product [Vitis vinifera][more]
gi|731410547|ref|XP_002269015.2|1.5e-24871.26PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0005739 mitochondrion
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG15g05090.1Cp4.1LG15g05090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 168..194
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 472..504
score: 1.9
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 406..455
score: 3.4E-16coord: 511..554
score: 9.8E-17coord: 196..245
score: 6.2E-11coord: 336..383
score: 4.5E-16coord: 266..315
score: 3.1E-18coord: 582..628
score: 5.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 409..442
score: 5.7E-11coord: 165..196
score: 4.7E-6coord: 585..617
score: 1.3E-8coord: 549..582
score: 2.5E-9coord: 234..268
score: 4.6E-9coord: 269..303
score: 4.9E-9coord: 304..337
score: 2.9E-10coord: 444..478
score: 3.5E-7coord: 375..408
score: 4.4E-7coord: 514..547
score: 5.2E-12coord: 339..372
score: 1.5E-9coord: 480..513
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 477..511
score: 12.441coord: 442..476
score: 11.071coord: 407..441
score: 14.929coord: 162..196
score: 11.093coord: 582..616
score: 11.509coord: 337..371
score: 12.858coord: 197..231
score: 7.87coord: 267..301
score: 13.055coord: 372..406
score: 10.918coord: 547..581
score: 13.351coord: 232..266
score: 12.299coord: 302..336
score: 14.59coord: 512..546
score: 1
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 545..573
score: 1.2E-10coord: 173..332
score: 1.2E-10coord: 370..476
score: 1.2
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 124..630
score: 2.8E-245coord: 32..93
score: 2.8E
NoneNo IPR availablePANTHERPTHR24015:SF302SUBFAMILY NOT NAMEDcoord: 124..630
score: 2.8E-245coord: 32..93
score: 2.8E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 297..502
score: 7.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG15g05090Cucsa.220220Cucumber (Gy14) v1cgycpeB0594
Cp4.1LG15g05090CmaCh19G006350Cucurbita maxima (Rimu)cmacpeB522
Cp4.1LG15g05090CmoCh11G013310Cucurbita moschata (Rifu)cmocpeB095
Cp4.1LG15g05090CmoCh19G006500Cucurbita moschata (Rifu)cmocpeB481
Cp4.1LG15g05090Cla015975Watermelon (97103) v1cpewmB268
Cp4.1LG15g05090Csa7G075040Cucumber (Chinese Long) v2cpecuB258
Cp4.1LG15g05090MELO3C018417Melon (DHL92) v3.5.1cpemeB225
Cp4.1LG15g05090ClCG02G005520Watermelon (Charleston Gray)cpewcgB233
Cp4.1LG15g05090CSPI07G08010Wild cucumber (PI 183967)cpecpiB258
Cp4.1LG15g05090Lsi11G010450Bottle gourd (USVL1VR-Ls)cpelsiB199
Cp4.1LG15g05090MELO3C018417.2Melon (DHL92) v3.6.1cpemedB263
Cp4.1LG15g05090CsaV3_7G010110Cucumber (Chinese Long) v3cpecucB0323
Cp4.1LG15g05090Bhi05G001031Wax gourdcpewgoB0316
Cp4.1LG15g05090CsGy7G007580Cucumber (Gy14) v2cgybcpeB911
Cp4.1LG15g05090Carg22040Silver-seed gourdcarcpeB0295
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG15g05090Cucurbita pepo (Zucchini)cpecpeB255
Cp4.1LG15g05090Cucurbita pepo (Zucchini)cpecpeB262
Cp4.1LG15g05090Cucurbita pepo (Zucchini)cpecpeB264
Cp4.1LG15g05090Cucurbita pepo (Zucchini)cpecpeB269
Cp4.1LG15g05090Cucurbita pepo (Zucchini)cpecpeB274
Cp4.1LG15g05090Cucumber (Gy14) v1cgycpeB0245
Cp4.1LG15g05090Cucurbita maxima (Rimu)cmacpeB116
Cp4.1LG15g05090Cucurbita maxima (Rimu)cmacpeB561
Cp4.1LG15g05090Cucurbita maxima (Rimu)cmacpeB616
Cp4.1LG15g05090Cucurbita moschata (Rifu)cmocpeB514
Cp4.1LG15g05090Wild cucumber (PI 183967)cpecpiB236
Cp4.1LG15g05090Cucumber (Chinese Long) v2cpecuB232
Cp4.1LG15g05090Bottle gourd (USVL1VR-Ls)cpelsiB195
Cp4.1LG15g05090Cucumber (Gy14) v2cgybcpeB185
Cp4.1LG15g05090Cucumber (Gy14) v2cgybcpeB186
Cp4.1LG15g05090Melon (DHL92) v3.6.1cpemedB266
Cp4.1LG15g05090Silver-seed gourdcarcpeB1130
Cp4.1LG15g05090Silver-seed gourdcarcpeB1241
Cp4.1LG15g05090Cucumber (Chinese Long) v3cpecucB0289