Cla015975 (gene) Watermelon (97103) v1

NameCla015975
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7L4E9_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr2 : 5710548 .. 5712473 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCGTTTCAAAATTCTTAAGCTTTCTTCTCTGAACTTCAATCCAATCACTAATTCCCAATCCTTCGCACCCTTCTCTTCGATTTCTCTCCAAAAAACTCCACCGGAATCTCCATTTTCATCTCCAAATTCAACAACAAACGCCCCTTCGCCTCTAACCCATCATTTTCTCGAACAATCGGCCCGATCCTCTCAGTGGCATTTCATCAAACAGGTAGAATCCACTCTCACTCCCTCGCTTATCTCTGAAGCCCTTCAAAATCTCCACGAATCTCCACAGATTGTTCTCGACTTGTTAAACCATTTACATCATCAATTACTTGATGCCGAAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCACTTTACAGCTTCTCAAACAGGCTGTTGGGTGTGGCACTACTAATTCAATTAGCGAGATTTTTGAATTGTTAGCTGCTTCTCGTGATCGTTTGGGTTTTAAAAGTTGTATTGTTTTTGACCACTTGATTAAGTCTTGTTGTGAAATGAATGGGGTAGATGAGGCTTTTAAGTGTTTTTACATGATGAAGGAAAAGGGTATTTTACCTAAGATTGAGACCTGCAATGATTTGTTGAGTTTGTGTCTGAAGTTGAACAGGATTGAGGCAGCTTGGGTTTTATATGCTGAGATGTTTAGATTGAGAATAAAATCTAGTGTTTATACATTTAACATTATGATTAATGTTCTATGCAAGGAGGGGAAGTTGAATAAGGCTAAGGATTTTATTGGGCATATGGAGAGTTTAGGGGTTAAACCCAATGTCGTTACGTATAATACAATTGTTCATGGATATTGTTCGAGAGGGAGAGTTGAAGGGGCTGATGCTATTTTGAATACTATGAAAAGGAAAAATATTCAACCTGATTCATACACATATGGCTCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTACAAATTGGGTTGCTTCCTAGTGCTGTAACTTATAATAGTTTGATTGATGGATTTTGCAATAAGGGTAATTTGGATATGGCCTTTGCTTATAAAGATGAGATGTTGAAGAAGGGCATAATGCCAACTGTGTCAACTTATAACTTGTTGATTCATGCATTGTTTATGGAACAAAAAATAGATGAAGCTGAAGGTATGATCAAAGAAATTCAGGAGAAAGGAATGTCTCCTGATGCTATTACATATAATATCTTGATTAATGGGTATTGTAGATGTGGAAATGCAAAGAAAGCGTTTCATCTACATGATCAAATGTTGGTGAGTGGTATTCGGCCGACAAAAGTGACATACACATCACTTATTCATGTTTTGAGCAAAAAGAACAGAATGAGGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTAAAGGTGTGTTGCCTGATGTCATTATGTTTAATGCTTTGATCGATGGTCATTGCTCTAACGGTAATGTCGAGCGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGGCGTTGTAGGGAAGGAAAAGTTGAAGAAGCTCGTGAACTTTTCAATGAGATGAAGAGAAGAGGGATTAAGCCCGATCATGTTAGTTTCAATACGCTAATAAGTGGTTATAGTAGACGAGGTGACATAAAGGATGCTTTCAGAGTACGAGATGAGATGCTCGATATAGGATTCAATCCAACTCGTTTAACTTATAATTCTCTTATACGTGGGTTATGCAAAAACCAAGAAGGTGATCATGCTGAAGAGCTCCTTAAAGAAATGGTCAGTAAAGGAATTACACCTGATGATAGCACTTATTTCTCATTGATTGAAGGTATTATAAAAGATAACAATCCAGTTGAAAATGAGAGCACATAA

mRNA sequence

ATGATTCGTTTCAAAATTCTTAAGCTTTCTTCTCTGAACTTCAATCCAATCACTAATTCCCAATCCTTCGCACCCTTCTCTTCGATTTCTCTCCAAAAAACTCCACCGGAATCTCCATTTTCATCTCCAAATTCAACAACAAACGCCCCTTCGCCTCTAACCCATCATTTTCTCGAACAATCGGCCCGATCCTCTCAGTGGCATTTCATCAAACAGGTAGAATCCACTCTCACTCCCTCGCTTATCTCTGAAGCCCTTCAAAATCTCCACGAATCTCCACAGATTGTTCTCGACTTGTTAAACCATTTACATCATCAATTACTTGATGCCGAAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCACTTTACAGCTTCTCAAACAGGCTGTTGGGTGTGGCACTACTAATTCAATTAGCGAGATTTTTGAATTGTTAGCTGCTTCTCGTGATCGTTTGGGTTTTAAAAGTTGTATTGTTTTTGACCACTTGATTAAGTCTTGTTGTGAAATGAATGGGGTAGATGAGGCTTTTAAGTGTTTTTACATGATGAAGGAAAAGGGTATTTTACCTAAGATTGAGACCTGCAATGATTTGTTGAGTTTGTGTCTGAAGTTGAACAGGATTGAGGCAGCTTGGGTTTTATATGCTGAGATGTTTAGATTGAGAATAAAATCTAGTGTTTATACATTTAACATTATGATTAATGTTCTATGCAAGGAGGGGAAGTTGAATAAGGCTAAGGATTTTATTGGGCATATGGAGAGTTTAGGGGTTAAACCCAATGTCGTTACGTATAATACAATTGTTCATGGATATTGTTCGAGAGGGAGAGTTGAAGGGGCTGATGCTATTTTGAATACTATGAAAAGGAAAAATATTCAACCTGATTCATACACATATGGCTCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTACAAATTGGGTTGCTTCCTAGTGCTGTAACTTATAATAGTTTGATTGATGGATTTTGCAATAAGGGTAATTTGGATATGGCCTTTGCTTATAAAGATGAGATGTTGAAGAAGGGCATAATGCCAACTGTGTCAACTTATAACTTGTTGATTCATGCATTGTTTATGGAACAAAAAATAGATGAAGCTGAAGGTATGATCAAAGAAATTCAGGAGAAAGGAATGTCTCCTGATGCTATTACATATAATATCTTGATTAATGGGTATTGTAGATGTGGAAATGCAAAGAAAGCGTTTCATCTACATGATCAAATGTTGGTGAGTGGTATTCGGCCGACAAAAGTGACATACACATCACTTATTCATGTTTTGAGCAAAAAGAACAGAATGAGGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTAAAGGTGTGTTGCCTGATGTCATTATGTTTAATGCTTTGATCGATGGTCATTGCTCTAACGGTAATGTCGAGCGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGGCGTTGTAGGGAAGGAAAAGTTGAAGAAGCTCGTGAACTTTTCAATGAGATGAAGAGAAGAGGGATTAAGCCCGATCATGTTAGTTTCAATACGCTAATAAGTGGTTATAGTAGACGAGGTGACATAAAGGATGCTTTCAGAGTACGAGATGAGATGCTCGATATAGGATTCAATCCAACTCGTTTAACTTATAATTCTCTTATACGTGGGTTATGCAAAAACCAAGAAGGTGATCATGCTGAAGAGCTCCTTAAAGAAATGGTCAGTAAAGGAATTACACCTGATGATAGCACTTATTTCTCATTGATTGAAGGTATTATAAAAGATAACAATCCAGTTGAAAATGAGAGCACATAA

Coding sequence (CDS)

ATGATTCGTTTCAAAATTCTTAAGCTTTCTTCTCTGAACTTCAATCCAATCACTAATTCCCAATCCTTCGCACCCTTCTCTTCGATTTCTCTCCAAAAAACTCCACCGGAATCTCCATTTTCATCTCCAAATTCAACAACAAACGCCCCTTCGCCTCTAACCCATCATTTTCTCGAACAATCGGCCCGATCCTCTCAGTGGCATTTCATCAAACAGGTAGAATCCACTCTCACTCCCTCGCTTATCTCTGAAGCCCTTCAAAATCTCCACGAATCTCCACAGATTGTTCTCGACTTGTTAAACCATTTACATCATCAATTACTTGATGCCGAAACTCTTTGCCTTGCCATTGTCATTGTTGCTCGTCTTCCATCTCCCAAACCCACTTTACAGCTTCTCAAACAGGCTGTTGGGTGTGGCACTACTAATTCAATTAGCGAGATTTTTGAATTGTTAGCTGCTTCTCGTGATCGTTTGGGTTTTAAAAGTTGTATTGTTTTTGACCACTTGATTAAGTCTTGTTGTGAAATGAATGGGGTAGATGAGGCTTTTAAGTGTTTTTACATGATGAAGGAAAAGGGTATTTTACCTAAGATTGAGACCTGCAATGATTTGTTGAGTTTGTGTCTGAAGTTGAACAGGATTGAGGCAGCTTGGGTTTTATATGCTGAGATGTTTAGATTGAGAATAAAATCTAGTGTTTATACATTTAACATTATGATTAATGTTCTATGCAAGGAGGGGAAGTTGAATAAGGCTAAGGATTTTATTGGGCATATGGAGAGTTTAGGGGTTAAACCCAATGTCGTTACGTATAATACAATTGTTCATGGATATTGTTCGAGAGGGAGAGTTGAAGGGGCTGATGCTATTTTGAATACTATGAAAAGGAAAAATATTCAACCTGATTCATACACATATGGCTCTCTTATCAGTGGGATGTGCAAGCAAGGAAGACTTGAAGAAGCATCAAAGATTTTTGAAGAAATGGTACAAATTGGGTTGCTTCCTAGTGCTGTAACTTATAATAGTTTGATTGATGGATTTTGCAATAAGGGTAATTTGGATATGGCCTTTGCTTATAAAGATGAGATGTTGAAGAAGGGCATAATGCCAACTGTGTCAACTTATAACTTGTTGATTCATGCATTGTTTATGGAACAAAAAATAGATGAAGCTGAAGGTATGATCAAAGAAATTCAGGAGAAAGGAATGTCTCCTGATGCTATTACATATAATATCTTGATTAATGGGTATTGTAGATGTGGAAATGCAAAGAAAGCGTTTCATCTACATGATCAAATGTTGGTGAGTGGTATTCGGCCGACAAAAGTGACATACACATCACTTATTCATGTTTTGAGCAAAAAGAACAGAATGAGGGAGGCAGATGATTTGTTTAAGAAGATCACAAGTAAAGGTGTGTTGCCTGATGTCATTATGTTTAATGCTTTGATCGATGGTCATTGCTCTAACGGTAATGTCGAGCGTGCATTTGAGCTTCTGAAAGATATGGATAGGATGAAGGTTCCACCCGATGAAGTGACTTTCAATACCATAATGCAAGGGCGTTGTAGGGAAGGAAAAGTTGAAGAAGCTCGTGAACTTTTCAATGAGATGAAGAGAAGAGGGATTAAGCCCGATCATGTTAGTTTCAATACGCTAATAAGTGGTTATAGTAGACGAGGTGACATAAAGGATGCTTTCAGAGTACGAGATGAGATGCTCGATATAGGATTCAATCCAACTCGTTTAACTTATAATTCTCTTATACGTGGGTTATGCAAAAACCAAGAAGGTGATCATGCTGAAGAGCTCCTTAAAGAAATGGTCAGTAAAGGAATTACACCTGATGATAGCACTTATTTCTCATTGATTGAAGGTATTATAAAAGATAACAATCCAGTTGAAAATGAGAGCACATAA

Protein sequence

MIRFKILKLSSLNFNPITNSQSFAPFSSISLQKTPPESPFSSPNSTTNAPSPLTHHFLEQSARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLLNHLHHQLLDAETLCLAIVIVARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVENEST
BLAST of Cla015975 vs. Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 7.3e-203
Identity = 350/629 (55.64%), Postives = 463/629 (73.61%), Query Frame = 1

Query: 1   MIRFKILKLSSLNFNPITNSQSFAPFSSISLQKTPPESPFSSPNSTTNAPSPLTHHFLEQ 60
           ++R +I  LS   ++P       A  SS++ Q + PES             P+T   L +
Sbjct: 9   ILRHRISILSGAGYSPAA-----ARLSSLA-QTSTPESVLP----------PITSEILLE 68

Query: 61  SARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLLNHLHHQLLDAETLCLAIVIV 120
           S RSSQWH ++ V   LTPSL+S  L +L ++P +  + +NH+    LD +T CLAI ++
Sbjct: 69  SIRSSQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYRLDFQTQCLAIAVI 128

Query: 121 ARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGV 180
           ++L SPKP  QLLK+ V     NSI  +F+ L  + DRL  KS I+FD L++ CC++  V
Sbjct: 129 SKLSSPKPVTQLLKEVV-TSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMV 188

Query: 181 DEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIM 240
           DEA +CFY+MKEKG  PK ETCN +L+L  +LNRIE AWV YA+M+R+ IKS+VYTFNIM
Sbjct: 189 DEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIM 248

Query: 241 INVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNI 300
           INVLCKEGKL KAK F+G ME  G+KP +VTYNT+V G+  RGR+EGA  I++ MK K  
Sbjct: 249 INVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF 308

Query: 301 QPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFA 360
           QPD  TY  ++S MC +GR   AS++  EM +IGL+P +V+YN LI G  N G+L+MAFA
Sbjct: 309 QPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 368

Query: 361 YKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYC 420
           Y+DEM+K+G++PT  TYN LIH LFME KI+ AE +I+EI+EKG+  D++TYNILINGYC
Sbjct: 369 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 428

Query: 421 RCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVI 480
           + G+AKKAF LHD+M+  GI+PT+ TYTSLI+VL +KN+ READ+LF+K+  KG+ PD++
Sbjct: 429 QHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 488

Query: 481 MFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEM 540
           M N L+DGHC+ GN++RAF LLK+MD M + PD+VT+N +M+G C EGK EEAREL  EM
Sbjct: 489 MMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEM 548

Query: 541 KRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEG 600
           KRRGIKPDH+S+NTLISGYS++GD K AF VRDEML +GFNPT LTYN+L++GL KNQEG
Sbjct: 549 KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEG 608

Query: 601 DHAEELLKEMVSKGITPDDSTYFSLIEGI 630
           + AEELL+EM S+GI P+DS++ S+IE +
Sbjct: 609 ELAEELLREMKSEGIVPNDSSFCSVIEAM 617

BLAST of Cla015975 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.6e-93
Identity = 197/636 (30.97%), Postives = 333/636 (52.36%), Query Frame = 1

Query: 15  NPITNSQSFAPFSSISLQKTPPESPFSSPNSTTNAPS-PLTHHFL--------EQSARSS 74
           +P+T    F P  +++   +P   P SS +S++++ S  ++  FL        +Q   + 
Sbjct: 13  DPLTR---FKPLKNLTTSSSPVFEPSSSSSSSSSSASFSVSDSFLVEKICFSLKQGNNNV 72

Query: 75  QWHFIKQVESTLTPSLISEALQNLHES---PQIVLDLLN----HLHHQLLDAETLCLAIV 134
           + H I+     L P  + E L          Q  +D L     +  H  L    +   +V
Sbjct: 73  RNHLIR-----LNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILV 132

Query: 135 IVARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMN 194
              RL   +  L  + +  G     S  EI   L ++    G     VFD LI++  +  
Sbjct: 133 RSGRLSDAQSCLLRMIRRSGV----SRLEIVNSLDSTFSNCGSNDS-VFDLLIRTYVQAR 192

Query: 195 GVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFN 254
            + EA + F +++ KG    I+ CN L+   +++  +E AW +Y E+ R  +  +VYT N
Sbjct: 193 KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLN 252

Query: 255 IMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRK 314
           IM+N LCK+GK+ K   F+  ++  GV P++VTYNT++  Y S+G +E A  ++N M  K
Sbjct: 253 IMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGK 312

Query: 315 NIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMA 374
              P  YTY ++I+G+CK G+ E A ++F EM++ GL P + TY SL+   C KG++   
Sbjct: 313 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVET 372

Query: 375 FAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILING 434
                +M  + ++P +  ++ ++        +D+A      ++E G+ PD + Y ILI G
Sbjct: 373 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 432

Query: 435 YCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPD 494
           YCR G    A +L ++ML  G     VTY +++H L K+  + EAD LF ++T + + PD
Sbjct: 433 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD 492

Query: 495 VIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFN 554
                 LIDGHC  GN++ A EL + M   ++  D VT+NT++ G  + G ++ A+E++ 
Sbjct: 493 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 552

Query: 555 EMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQ 614
           +M  + I P  +S++ L++    +G + +AFRV DEM+     PT +  NS+I+G C++ 
Sbjct: 553 DMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSG 612

Query: 615 EGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNN 635
                E  L++M+S+G  PD  +Y +LI G +++ N
Sbjct: 613 NASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635


HSP 2 Score: 281.2 bits (718), Expect = 2.9e-74
Identity = 145/470 (30.85%), Postives = 249/470 (52.98%), Query Frame = 1

Query: 170 LIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLR 229
           ++ + C+   +++       ++EKG+ P I T N L+S       +E A+ L   M    
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 230 IKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGAD 289
               VYT+N +IN LCK GK  +AK+    M   G+ P+  TY +++   C +G V   +
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 290 AILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGF 349
            + + M+ +++ PD   + S++S   + G L++A   F  + + GL+P  V Y  LI G+
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 350 CNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDA 409
           C KG + +A   ++EML++G    V TYN ++H L   + + EA+ +  E+ E+ + PD+
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480

Query: 410 ITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKK 469
            T  ILI+G+C+ GN + A  L  +M    IR   VTY +L+    K   +  A +++  
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 470 ITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGK 529
           + SK +LP  I ++ L++  CS G++  AF +  +M    + P  +  N++++G CR G 
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600

Query: 530 VEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDI--GFNPTRLTY 589
             +      +M   G  PD +S+NTLI G+ R  ++  AF +  +M +   G  P   TY
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660

Query: 590 NSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVE 638
           NS++ G C+  +   AE +L++M+ +G+ PD STY  +I G +  +N  E
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710


HSP 3 Score: 117.5 bits (293), Expect = 5.5e-25
Identity = 65/235 (27.66%), Postives = 120/235 (51.06%), Query Frame = 1

Query: 140 GTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKI 199
           G   +  E+F+ +   R RL     + ++ L+    ++  +D A + +  M  K ILP  
Sbjct: 494 GNLQNAMELFQKMKEKRIRL---DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 553

Query: 200 ETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGH 259
            + + L++       +  A+ ++ EM    IK +V   N MI   C+ G  +  + F+  
Sbjct: 554 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 613

Query: 260 MESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKN--IQPDSYTYGSLISGMCKQ 319
           M S G  P+ ++YNT+++G+     +  A  ++  M+ +   + PD +TY S++ G C+Q
Sbjct: 614 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 673

Query: 320 GRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMP 373
            +++EA  +  +M++ G+ P   TY  +I+GF ++ NL  AF   DEML++G  P
Sbjct: 674 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725

BLAST of Cla015975 vs. Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-84
Identity = 169/531 (31.83%), Postives = 298/531 (56.12%), Query Frame = 1

Query: 111 ETLCLAIVIVARLPSPKPTLQLLK---QAVGCGTTNSISEIFELLAASRDRLGFKSCIVF 170
           E+LC+ I +       K    L+    +      T+S  + F+LL  +    G     VF
Sbjct: 120 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWG-SDPRVF 179

Query: 171 DHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLK-LNRIEAAWVLYAEMF 230
           D   +   +   + EA + F  M   G++  +++CN  L+   K   +   A +++ E  
Sbjct: 180 DVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP 239

Query: 231 RLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVE 290
            + +  +V ++NI+I+ +C+ G++ +A   +  ME  G  P+V++Y+T+V+GYC  G ++
Sbjct: 240 EVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 299

Query: 291 GADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLI 350
               ++  MKRK ++P+SY YGS+I  +C+  +L EA + F EM++ G+LP  V Y +LI
Sbjct: 300 KVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLI 359

Query: 351 DGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMS 410
           DGFC +G++  A  +  EM  + I P V TY  +I        + EA  +  E+  KG+ 
Sbjct: 360 DGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLE 419

Query: 411 PDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDL 470
           PD++T+  LINGYC+ G+ K AF +H+ M+ +G  P  VTYT+LI  L K+  +  A++L
Sbjct: 420 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 479

Query: 471 FKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCR 530
             ++   G+ P++  +N++++G C +GN+E A +L+ + +   +  D VT+ T+M   C+
Sbjct: 480 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 539

Query: 531 EGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLT 590
            G++++A+E+  EM  +G++P  V+FN L++G+   G ++D  ++ + ML  G  P   T
Sbjct: 540 SGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATT 599

Query: 591 YNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVE 638
           +NSL++  C       A  + K+M S+G+ PD  TY +L++G  K  N  E
Sbjct: 600 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKE 649


HSP 2 Score: 273.5 bits (698), Expect = 6.0e-72
Identity = 138/456 (30.26%), Postives = 247/456 (54.17%), Query Frame = 1

Query: 167 FDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMF 226
           ++ +I   C++  + EA     +M+ KG  P + + + +++   +   ++  W L   M 
Sbjct: 249 YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMK 308

Query: 227 RLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVE 286
           R  +K + Y +  +I +LC+  KL +A++    M   G+ P+ V Y T++ G+C RG + 
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368

Query: 287 GADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLI 346
            A      M  ++I PD  TY ++ISG C+ G + EA K+F EM   GL P +VT+  LI
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428

Query: 347 DGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMS 406
           +G+C  G++  AF   + M++ G  P V TY  LI  L  E  +D A  ++ E+ + G+ 
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488

Query: 407 PDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDL 466
           P+  TYN ++NG C+ GN ++A  L  +   +G+    VTYT+L+    K   M +A ++
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548

Query: 467 FKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCR 526
            K++  KG+ P ++ FN L++G C +G +E   +LL  M    + P+  TFN++++  C 
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608

Query: 527 EGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLT 586
              ++ A  ++ +M  RG+ PD  ++  L+ G+ +  ++K+A+ +  EM   GF+ +  T
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVST 668

Query: 587 YNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTY 623
           Y+ LI+G  K ++   A E+  +M  +G+  D   +
Sbjct: 669 YSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704


HSP 3 Score: 109.8 bits (273), Expect = 1.1e-22
Identity = 62/236 (26.27%), Postives = 108/236 (45.76%), Query Frame = 1

Query: 167 FDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMF 226
           ++ ++   C+   ++EA K     +  G+     T   L+    K   ++ A  +  EM 
Sbjct: 494 YNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML 553

Query: 227 RLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVE 286
              ++ ++ TFN+++N  C  G L   +  +  M + G+ PN  T+N++V  YC R  ++
Sbjct: 554 GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLK 613

Query: 287 GADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLI 346
            A AI   M  + + PD  TY +L+ G CK   ++EA  +F+EM   G   S  TY+ LI
Sbjct: 614 AATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673

Query: 347 DGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQE 403
            GF  +     A    D+M ++G+      ++      +  ++ D     I EI E
Sbjct: 674 KGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729

BLAST of Cla015975 vs. Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.6e-83
Identity = 176/591 (29.78%), Postives = 319/591 (53.98%), Query Frame = 1

Query: 41  SSPNSTTNAPSPLTHHFLEQSARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLL 100
           SSP+ +  A   LT  FL++       + +  + +  TP   S  L        ++L  L
Sbjct: 17  SSPSDSLLADKALT--FLKRHP-----YQLHHLSANFTPEAASNLLLKSQNDQALILKFL 76

Query: 101 NHLH-HQLLDAETLCLAIVIVARLPSPKPTLQLLKQAVGCGTTNS--ISEIFELLAASRD 160
           N  + HQ       C+ + I+ +    K T Q+L + V   T +    S +F+ L  + D
Sbjct: 77  NWANPHQFFTLRCKCITLHILTKFKLYK-TAQILAEDVAAKTLDDEYASLVFKSLQETYD 136

Query: 161 RLGFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNR-IE 220
            L + +  VFD ++KS   ++ +D+A    ++ +  G +P + + N +L   ++  R I 
Sbjct: 137 -LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNIS 196

Query: 221 AAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIV 280
            A  ++ EM   ++  +V+T+NI+I   C  G ++ A      ME+ G  PNVVTYNT++
Sbjct: 197 FAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLI 256

Query: 281 HGYCSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLL 340
            GYC   +++    +L +M  K ++P+  +Y  +I+G+C++GR++E S +  EM + G  
Sbjct: 257 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 316

Query: 341 PSAVTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGM 400
              VTYN+LI G+C +GN   A     EML+ G+ P+V TY  LIH++     ++ A   
Sbjct: 317 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 376

Query: 401 IKEIQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSK 460
           + +++ +G+ P+  TY  L++G+ + G   +A+ +  +M  +G  P+ VTY +LI+    
Sbjct: 377 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 436

Query: 461 KNRMREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVT 520
             +M +A  + + +  KG+ PDV+ ++ ++ G C + +V+ A  + ++M    + PD +T
Sbjct: 437 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 496

Query: 521 FNTIMQGRCREGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEML 580
           +++++QG C + + +EA +L+ EM R G+ PD  ++  LI+ Y   GD++ A ++ +EM+
Sbjct: 497 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 556

Query: 581 DIGFNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIE 628
           + G  P  +TY+ LI GL K      A+ LL ++  +   P D TY +LIE
Sbjct: 557 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598


HSP 2 Score: 261.2 bits (666), Expect = 3.1e-68
Identity = 143/462 (30.95%), Postives = 246/462 (53.25%), Query Frame = 1

Query: 167 FDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMF 226
           ++ LI+  C    +D A   F  M+ KG LP + T N L+    KL +I+  + L   M 
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267

Query: 227 RLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVE 286
              ++ ++ ++N++IN LC+EG++ +    +  M   G   + VTYNT++ GYC  G   
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327

Query: 287 GADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLI 346
            A  +   M R  + P   TY SLI  MCK G +  A +  ++M   GL P+  TY +L+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387

Query: 347 DGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMS 406
           DGF  KG ++ A+    EM   G  P+V TYN LI+   +  K+++A  ++++++EKG+S
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447

Query: 407 PDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDL 466
           PD ++Y+ +++G+CR  +  +A  +  +M+  GI+P  +TY+SLI    ++ R +EA DL
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507

Query: 467 FKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCR 526
           ++++   G+ PD   + ALI+ +C  G++E+A +L  +M    V PD VT++ ++ G  +
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567

Query: 527 EGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLT 586
           + +  EA+ L  ++      P  V+++TLI   S                +I F     +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCS----------------NIEFK----S 627

Query: 587 YNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEG 629
             SLI+G C       A+++ + M+ K   PD + Y  +I G
Sbjct: 628 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649


HSP 3 Score: 151.0 bits (380), Expect = 4.5e-35
Identity = 96/372 (25.81%), Postives = 179/372 (48.12%), Query Frame = 1

Query: 145 ISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCND 204
           ++E + +L    D     S + ++ LI   C    +++A      MKEKG+ P + + + 
Sbjct: 396 MNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 205 LLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLG 264
           +LS   +   ++ A  +  EM    IK    T++ +I   C++ +  +A D    M  +G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 265 VKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEAS 324
           + P+  TY  +++ YC  G +E A  + N M  K + PD  TY  LI+G+ KQ R  EA 
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575

Query: 325 KIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHAL 384
           ++  ++     +PS VTY++LI+   N  N++           K ++        LI   
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIE---NCSNIEF----------KSVVS-------LIKGF 635

Query: 385 FMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTK 444
            M+  + EA+ + + +  K   PD   YNI+I+G+CR G+ +KA+ L+ +M+ SG     
Sbjct: 636 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHT 695

Query: 445 VTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKD 504
           VT  +L+  L K+ ++ E + +   +     L +      L++ +   GN++   ++L +
Sbjct: 696 VTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAE 747

Query: 505 MDRMKVPPDEVT 517
           M +    P+ ++
Sbjct: 756 MAKDGFLPNGIS 747

BLAST of Cla015975 vs. Swiss-Prot
Match: PPR27_ARATH (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-79
Identity = 166/483 (34.37%), Postives = 264/483 (54.66%), Query Frame = 1

Query: 140 GTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKI 199
           G+ + +  IF  ++   D +   S I+ D L+ +    +  +  F+ F      G     
Sbjct: 131 GSDHQVHSIFHAISMC-DNVCVNS-IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSA 190

Query: 200 ETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGH 259
            +C  L+   LK NR      +Y EM R +I+ +V+TFN++IN LCK GK+NKA+D +  
Sbjct: 191 LSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 250

Query: 260 MESLGVKPNVVTYNTIVHGYCS---RGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCK 319
           M+  G  PNVV+YNT++ GYC     G++  ADA+L  M   ++ P+  T+  LI G  K
Sbjct: 251 MKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 310

Query: 320 QGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVST 379
              L  + K+F+EM+   + P+ ++YNSLI+G CN G +  A + +D+M+  G+ P + T
Sbjct: 311 DDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLIT 370

Query: 380 YNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQML 439
           YN LI+       + EA  M   ++ +G  P    YN+LI+ YC+ G     F L ++M 
Sbjct: 371 YNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEME 430

Query: 440 VSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVE 499
             GI P   TY  LI  L +   +  A  LF ++TSKG LPD++ F+ L++G+C  G   
Sbjct: 431 REGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKGESR 490

Query: 500 RAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEM-KRRGIKPDHVSFNTL 559
           +A  LLK+M +M + P  +T+N +M+G C+EG ++ A  +  +M K R ++ +  S+N L
Sbjct: 491 KAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 550

Query: 560 ISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGI 619
           + GYS++G ++DA  + +EML+ G  P R+TY                E + +EMV +G 
Sbjct: 551 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITY----------------EIVKEEMVDQGF 594

BLAST of Cla015975 vs. TrEMBL
Match: D7STD9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00970 PE=4 SV=1)

HSP 1 Score: 867.8 bits (2241), Expect = 8.0e-249
Identity = 424/602 (70.43%), Postives = 508/602 (84.39%), Query Frame = 1

Query: 40  FSSPNSTTNAPSPLTHHFLEQSARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDL 99
           F+S  S+ + P P+T   + +S  SSQWHFI+QV   LTP+LIS  L NL   PQ+V D 
Sbjct: 35  FNSLASSESTP-PITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDF 94

Query: 100 LNHLHHQLLDAETLCLAIVIVARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRL 159
           ++HLH   LD ++ CLA+V++ARLPSPK  LQLLKQ +G     +  E+F+ L  SRDRL
Sbjct: 95  IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATN-RELFDELTLSRDRL 154

Query: 160 GFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAW 219
             KS IVFD L++ CCE+   DEAFKCFYMMKEKGI+PKIETCND+LSL LKLNR+E AW
Sbjct: 155 SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 214

Query: 220 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGY 279
           VLYAEMFRLRI S+VYTFNIM+NVLCKEGKL KA++FIG ME LG KPNVV+YNTI+HGY
Sbjct: 215 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 274

Query: 280 CSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSA 339
            SRG +EGA  IL+ M+ K I+PDSYTYGSLISGMCK+GRLEEAS +F++MV+IGL+P+A
Sbjct: 275 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 334

Query: 340 VTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKE 399
           VTYN+LIDG+CNKG+L+ AF+Y+DEM+KKGIMP+VSTYNLL+HALFME ++ EA+ MIKE
Sbjct: 335 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 394

Query: 400 IQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNR 459
           +++KG+ PDAITYNILINGY RCGNAKKAF LH++ML  GI PT VTYTSLI+VLS++NR
Sbjct: 395 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 454

Query: 460 MREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNT 519
           M+EADDLF+KI  +GV PDVIMFNA++DGHC+NGNVERAF LLK+MDR  VPPDEVTFNT
Sbjct: 455 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 514

Query: 520 IMQGRCREGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIG 579
           +MQGRCREGKVEEAR L +EMKRRGIKPDH+S+NTLISGY RRGDIKDAFRVRDEML IG
Sbjct: 515 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 574

Query: 580 FNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVENE 639
           FNPT LTYN+LI+ LCKNQEGD AEELLKEMV+KGI+PDDSTY SLIEG+   +  VE+ 
Sbjct: 575 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 634

Query: 640 ST 642
           ++
Sbjct: 635 AS 634

BLAST of Cla015975 vs. TrEMBL
Match: B9RZG0_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0939010 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 1.2e-241
Identity = 407/595 (68.40%), Postives = 497/595 (83.53%), Query Frame = 1

Query: 43  PNSTTNAPSPLTHHFLEQSARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLLNH 102
           PN++T++P  +TH  L  S +SSQWH IK +   L+PSLIS  L +LH+   + L  + H
Sbjct: 46  PNASTDSPLVITHQSLLDSIQSSQWHLIKHLAPNLSPSLISATLLSLHKKSDLALQFVTH 105

Query: 103 LHHQLLDAETLCLAIVIVARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFK 162
           +  + LD +T CLA+ +V+R PSPK TL LLKQ +       + ++F  LA +RDRLG K
Sbjct: 106 IGFKGLDIKTKCLAVAVVSRSPSPKSTLHLLKQTIESRVAG-VKDVFHELAITRDRLGTK 165

Query: 163 SCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLY 222
           S IVFD LI++CCE+   D+AF+CF MMKEKG++PKIET N +LSL LKLN+ E  WVLY
Sbjct: 166 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 225

Query: 223 AEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSR 282
           AEMFRL+IKS+VYTFNIMINVLCKEGKL KAKDFIG ME+LGVKPNVVTYNT++HGYCSR
Sbjct: 226 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 285

Query: 283 GRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTY 342
           GRVEGA  +L+ MK + ++PDSYTYGSLISGMCK G+LEEAS I E+M +IGLLP+AVTY
Sbjct: 286 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 345

Query: 343 NSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQE 402
           N+LIDG+CNKG+L  AF Y+DEM+++ I+PTVSTYNLLIHALF+E K+DEA+GMIK++ +
Sbjct: 346 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 405

Query: 403 KGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMRE 462
            G+ PD+ITYNILINGYCRCGNAKKAF+LHD+M+  GI+PT VTYTSLI+VLSK+NRM+ 
Sbjct: 406 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 465

Query: 463 ADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQ 522
           ADDLF+KI  +G  PD+IMFNALIDGHC+NGN++RAF LLK+MD+  + PDEVT+NT+MQ
Sbjct: 466 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ 525

Query: 523 GRCREGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNP 582
           GRCREGKVEEAREL  EMKRRGI+PDH+S+NTLISGYS+RGDI DAF +RDEML IGFNP
Sbjct: 526 GRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNP 585

Query: 583 TRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVE 638
           T LTYN+LI+GLCKNQ+GD AEELLKEMVSKGITPDDSTYFSLIEGI K ++  E
Sbjct: 586 TLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSE 639

BLAST of Cla015975 vs. TrEMBL
Match: V4SC21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030406mg PE=4 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 8.0e-241
Identity = 404/623 (64.85%), Postives = 503/623 (80.74%), Query Frame = 1

Query: 20  SQSFAPFSSISLQKTPPESPFSSPNSTTNAPSPLTHHFLEQSARSSQWHFIKQVESTLTP 79
           S S   FSS    +   ++    PN++      +T   L     SSQWHFIKQ+   +TP
Sbjct: 24  SNSCLLFSSTPQPRPTQQTQTFIPNTSGGNLPEITSELLNSYIHSSQWHFIKQLAPKITP 83

Query: 80  SLISEALQNLHESPQIVLDLLNHL-HHQLLDAETLCLAIVIVARLPSPKPTLQLLKQAVG 139
           SLI+ AL +LH++P +    +NHL   ++ D +T C AI +++RL + KPTLQLLK+ + 
Sbjct: 84  SLITSALLDLHKNPDLAFQFINHLGFRRIRDIKTRCFAIAVISRLSTSKPTLQLLKETLN 143

Query: 140 CGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPK 199
            G   +I  +F  LA +RD L  +S  VFD L++ CCE+   D+AFKCFYMMKEKG +PK
Sbjct: 144 SGIA-TIQVVFNELAVARDELRIRSSTVFDFLLRVCCELKRDDDAFKCFYMMKEKGFVPK 203

Query: 200 IETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIG 259
           IE+CND+LS+ +KLNR   AWVLYAEMFR+RIKSSV TFNIMIN+LCKEGKL KAKDF+G
Sbjct: 204 IESCNDMLSMFVKLNRPYKAWVLYAEMFRMRIKSSVCTFNIMINLLCKEGKLQKAKDFLG 263

Query: 260 HMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQG 319
            MESLG+KPN+VTYNTIVHGYC  GR+EGA  +LN MK + +QPDSYTYGS +SGMCK+G
Sbjct: 264 FMESLGIKPNIVTYNTIVHGYCLSGRIEGARLVLNAMKSRGVQPDSYTYGSFVSGMCKEG 323

Query: 320 RLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYN 379
           RLEEAS++ E+M + GL+P+AVTYN+LIDG+CNKGNL+MAF+++DEM+K+GIMPT STYN
Sbjct: 324 RLEEASRMLEQMKENGLVPTAVTYNTLIDGYCNKGNLEMAFSFRDEMVKQGIMPTASTYN 383

Query: 380 LLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVS 439
           LLIH L ME+K+ EA+ M+KE+ EKG+ PD+ITYNILINGYCRCGNAKKAF LHD+M+  
Sbjct: 384 LLIHELLMERKMVEADDMLKEMGEKGIVPDSITYNILINGYCRCGNAKKAFSLHDEMIHK 443

Query: 440 GIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERA 499
           GI+PT +TYTSLI VLSK+NRM EAD LF+   +KG+LPD++MFNALIDGHC+NGN+ERA
Sbjct: 444 GIQPTMLTYTSLIFVLSKQNRMIEADQLFENFLAKGMLPDIVMFNALIDGHCTNGNIERA 503

Query: 500 FELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEMKRRGIKPDHVSFNTLISG 559
           F LLK+MDRMKV PDEVT+NT+M GRCR+GKVEEAR L ++MKRRGIKPDH+S+NTLISG
Sbjct: 504 FSLLKEMDRMKVHPDEVTYNTLMHGRCRQGKVEEARRLLDQMKRRGIKPDHISYNTLISG 563

Query: 560 YSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGITPD 619
           YS+RGD+KDAFRVRDEML +GFNPTRLTYN+LI+GLCKNQEGD AEELL+EMVSKGITPD
Sbjct: 564 YSKRGDMKDAFRVRDEMLSVGFNPTRLTYNALIQGLCKNQEGDLAEELLREMVSKGITPD 623

Query: 620 DSTYFSLIEGIIKDNNPVENEST 642
           D+TYFSLIEGI   +   E+ ++
Sbjct: 624 DNTYFSLIEGIASVDKAAESSNS 645

BLAST of Cla015975 vs. TrEMBL
Match: A0A0D2SUK7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G044300 PE=4 SV=1)

HSP 1 Score: 837.8 bits (2163), Expect = 8.8e-240
Identity = 409/623 (65.65%), Postives = 503/623 (80.74%), Query Frame = 1

Query: 17  ITNSQSFAPFSSISLQKTPPESPFSSPNSTTNAPSP-LTHHFLEQSARSSQWHFIKQVES 76
           I   Q+  PF  I  Q++   +  SS +  + +PS  ++   L +SARSSQWHFIK +  
Sbjct: 6   ILKHQNPKPFILIPHQRSLFSALSSSTSDRSQSPSSEISPDVLVESARSSQWHFIKHLSP 65

Query: 77  TLTPSLISEALQNLHESPQIVLDLLNHLHHQLLDAETLCLAIVIVARLPSPKPTLQLLKQ 136
            L  SLIS  L NLH++P++ L   +H+    LD +T CLAI + +RLPSPKPTL LLK+
Sbjct: 66  NLDSSLISTVLLNLHKTPELALQFTSHVEFHRLDIKTRCLAIAVASRLPSPKPTLNLLKR 125

Query: 137 AVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGI 196
            V       ++ +F+ LA +R+RLG  + ++FD LIK+CCEM  VDE  +CFYMMK+KG 
Sbjct: 126 TVSSDIAG-VAVVFDELALARERLGISTTLLFDLLIKACCEMKRVDEGLECFYMMKDKGF 185

Query: 197 LPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKD 256
           +PKIETCN LLS  LKLNR E+AWVLYAEMF++RIKSSVYTFNIMINVLCKEGKL KAKD
Sbjct: 186 IPKIETCNALLSTFLKLNRTESAWVLYAEMFKMRIKSSVYTFNIMINVLCKEGKLKKAKD 245

Query: 257 FIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMC 316
           FIG ME+LGV PNVVTYNTI+H YCSRGRVEGA  +LN M+ K I+PDSY+Y SLISG+C
Sbjct: 246 FIGFMENLGVNPNVVTYNTIIHAYCSRGRVEGARFVLNAMRSKGIEPDSYSYSSLISGLC 305

Query: 317 KQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVS 376
           K  RLEEAS++FE+M +IGL+PSAVTYN LIDG+CN+G+L  AF Y+DEM+++GI PTVS
Sbjct: 306 KDKRLEEASEMFEKMKEIGLVPSAVTYNILIDGYCNEGDLGKAFRYRDEMVEQGISPTVS 365

Query: 377 TYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQM 436
           TYN+L+HALFME K+DEA+ ++KE++EKG+SPD ITY+ILINGY RCGN KKAF  HD+M
Sbjct: 366 TYNMLVHALFMECKMDEADDLVKEMEEKGLSPDQITYSILINGYSRCGNVKKAFGFHDEM 425

Query: 437 LVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNV 496
           L  GI+PT++TYTSLI+ LSK+NRM EAD+LF+KI  KG+  DVIMFNALIDGHC+NGN+
Sbjct: 426 LTKGIQPTRITYTSLIYALSKRNRMTEADNLFEKIMKKGIAVDVIMFNALIDGHCANGNM 485

Query: 497 ERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEMKRRGIKPDHVSFNTL 556
           ERAF LLK+MD++ VPPD+VT+NT+MQG CREG+VEEAREL +EMKRRGIKPDHVS+NTL
Sbjct: 486 ERAFSLLKEMDKLNVPPDDVTYNTLMQGHCREGRVEEARELLDEMKRRGIKPDHVSYNTL 545

Query: 557 ISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGI 616
           ISGYSRRGD+KDA RVRDEML  GFNPT LTYN+LI+G C NQEGD AEELLKEM+SKGI
Sbjct: 546 ISGYSRRGDMKDALRVRDEMLSTGFNPTLLTYNALIQGFCHNQEGDIAEELLKEMISKGI 605

Query: 617 TPDDSTYFSLIEGIIKDNNPVEN 639
           TPDDSTY SLI+G+   +  VE+
Sbjct: 606 TPDDSTYLSLIDGMGNIDQSVES 627

BLAST of Cla015975 vs. TrEMBL
Match: A0A067LCI3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10026 PE=4 SV=1)

HSP 1 Score: 835.1 bits (2156), Expect = 5.7e-239
Identity = 411/633 (64.93%), Postives = 506/633 (79.94%), Query Frame = 1

Query: 1   MIRFKILKLSSLNFNPITNSQSFAPFSSISLQKTP----PESPFSSPNSTTNAPSPLTHH 60
           ++  ++L  S LN   +T       +S +S   +P    P++     N +T +P   TH 
Sbjct: 6   VLNSQMLAHSKLNPAFVTAPYQLHCYSLLSSTPSPNTDHPQTRKIYANFSTTSPPVTTHQ 65

Query: 61  FLEQSARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLLNHLHHQLLDAETLCLA 120
            L +S +SS+WHFIK +  +LTPSL+S  L +L + P + L    H+    LD +T CLA
Sbjct: 66  ELLKSIQSSRWHFIKHLAPSLTPSLVSATLLSLQKKPDLALQFTTHIEFNSLDIKTKCLA 125

Query: 121 IVIVARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCE 180
           I +++  PSPK +LQLLKQ +      ++ ++F  L ++ D+L  KS I+FD LI++CCE
Sbjct: 126 IAVISPSPSPKASLQLLKQTISSNIA-TVEDVFNELESALDQLNTKSSILFDLLIRACCE 185

Query: 181 MNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYT 240
           M   D AF CF MMK+KG +PKIETCND+LSL LKLNR + AWVLYAEMFRLRI+S+VYT
Sbjct: 186 MKRGDNAFMCFDMMKKKGTVPKIETCNDMLSLFLKLNRTDVAWVLYAEMFRLRIQSTVYT 245

Query: 241 FNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMK 300
           FNIMINVLCKEGKL KAK+FIG MESLGVKPNVVTYNTI+HGYC RGRVEGA  IL+ MK
Sbjct: 246 FNIMINVLCKEGKLKKAKEFIGFMESLGVKPNVVTYNTIIHGYCWRGRVEGARMILDVMK 305

Query: 301 RKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLD 360
            K I+PDSYTYGSLISGMCK+GRLEEAS + E+M +IGL P+AVTYN+LIDG+CNKGNL+
Sbjct: 306 TKGIEPDSYTYGSLISGMCKEGRLEEASGLLEKMKEIGLRPNAVTYNTLIDGYCNKGNLE 365

Query: 361 MAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILI 420
            AF Y++EM+++GI+PTVSTYNLLIHALF+E K+DEA+ MIK + EKG+ PD+ITYNILI
Sbjct: 366 KAFGYRNEMVERGILPTVSTYNLLIHALFLEGKMDEADDMIKNMGEKGIFPDSITYNILI 425

Query: 421 NGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVL 480
           NGYCRCGNAKKAF LH++M+  GI+PT++TYTSLI+VL+K+NRMREAD+LF+ I  KGV 
Sbjct: 426 NGYCRCGNAKKAFSLHNEMVGKGIQPTRITYTSLIYVLNKRNRMREADNLFENIVRKGVF 485

Query: 481 PDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEAREL 540
           PD+IMFNALIDGHC+NGN++RAF LLK+MD  KV PDEVT+NT+M+GRCREGKVEEAR+L
Sbjct: 486 PDLIMFNALIDGHCANGNIDRAFALLKEMDTRKVFPDEVTYNTLMRGRCREGKVEEARKL 545

Query: 541 FNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCK 600
             EMK RGIKPDH+S+NTLISGYSRRGD+ DAF+VRDEML IGFNPT LTYN+LI+GLCK
Sbjct: 546 LEEMKSRGIKPDHISYNTLISGYSRRGDMNDAFKVRDEMLSIGFNPTLLTYNALIQGLCK 605

Query: 601 NQEGDHAEELLKEMVSKGITPDDSTYFSLIEGI 630
           NQEG HAEELLKEMVSKGI PDDSTY SLIE +
Sbjct: 606 NQEGQHAEELLKEMVSKGIAPDDSTYISLIEAM 637

BLAST of Cla015975 vs. NCBI nr
Match: gi|659109809|ref|XP_008454892.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 1065.4 bits (2754), Expect = 3.7e-308
Identity = 540/641 (84.24%), Postives = 576/641 (89.86%), Query Frame = 1

Query: 1   MIRFKILKLSSLNFNPITNSQSFAPFSSISLQKTPPESPFSSPNSTTNAPSPLTHHFLEQ 60
           MI ++I KLSSL  NP         FSSISL  TP ESP    NS+TNA SPLT HFLEQ
Sbjct: 1   MIPYRIPKLSSLKLNP---------FSSISLHNTPLESP----NSSTNAASPLTPHFLEQ 60

Query: 61  SARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLLNHLHHQLLDAETLCLAIVIV 120
           SARSSQWHFIKQVESTLTPSLIS+ L NLH+SPQIVLD LNHLHH+L DA TLCLAIVIV
Sbjct: 61  SARSSQWHFIKQVESTLTPSLISQTLLNLHQSPQIVLDFLNHLHHKLPDAHTLCLAIVIV 120

Query: 121 ARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGV 180
           ARLPSPKP L LLKQA+G GTTNSI EIFELLAASRDRLGFKS IVFDHLIKSCC+MN  
Sbjct: 121 ARLPSPKPALHLLKQALGGGTTNSIREIFELLAASRDRLGFKSSIVFDHLIKSCCDMNRA 180

Query: 181 DEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIM 240
           DEA +CFY MKEKGILPKIETCN+LLSL LKLNR EAAWVLYAEMFRLRIKSSVYTFNIM
Sbjct: 181 DEALECFYTMKEKGILPKIETCNNLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 240

Query: 241 INVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNI 300
           INVLCKEGKL KAKDFIGHME+LGVKPNVVTYNTIVHGYC RGRVEGA AIL TMKR+ I
Sbjct: 241 INVLCKEGKLKKAKDFIGHMETLGVKPNVVTYNTIVHGYCLRGRVEGAAAILTTMKRQKI 300

Query: 301 QPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFA 360
            PDS+TYGSLI GMCKQGRLEEASKIFEEMVQ GL P+AV YN+LIDGFCNKGNLDMA A
Sbjct: 301 DPDSFTYGSLICGMCKQGRLEEASKIFEEMVQKGLQPNAVIYNTLIDGFCNKGNLDMASA 360

Query: 361 YKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYC 420
           YKDEMLKKGI PTVSTYN LIHALFMEQ+IDEAEGMI+EIQEKG+SPDAITYNILINGYC
Sbjct: 361 YKDEMLKKGINPTVSTYNSLIHALFMEQRIDEAEGMIEEIQEKGISPDAITYNILINGYC 420

Query: 421 RCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVI 480
           RC NAKKAF LH++ML SGI+PTKVTYTSLIHVLSKKNRM+EADDLFKKITS+GVLPD+I
Sbjct: 421 RCANAKKAFRLHNEMLASGIKPTKVTYTSLIHVLSKKNRMKEADDLFKKITSEGVLPDLI 480

Query: 481 MFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEM 540
           MFNALIDGHCSN +V+RAFELLKDMDRMKVPPDEVTFNTIMQG CREGKVEEAR+LF+EM
Sbjct: 481 MFNALIDGHCSNSDVKRAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARQLFDEM 540

Query: 541 KRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEG 600
           KRRGIKPDH+SFNTLISGYSRRGDIKDAFRV++EML+ GFNPT LTYN+LI+GLCKNQEG
Sbjct: 541 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVQNEMLNTGFNPTVLTYNALIQGLCKNQEG 600

Query: 601 DHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVENEST 642
           D AEELLKEMVS GI PDD+TYF+LIEGI K N PVENE T
Sbjct: 601 DRAEELLKEMVSNGIKPDDTTYFTLIEGISKVNIPVENEYT 628

BLAST of Cla015975 vs. NCBI nr
Match: gi|449438705|ref|XP_004137128.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Cucumis sativus])

HSP 1 Score: 1053.9 bits (2724), Expect = 1.1e-304
Identity = 533/641 (83.15%), Postives = 570/641 (88.92%), Query Frame = 1

Query: 1   MIRFKILKLSSLNFNPITNSQSFAPFSSISLQKTPPESPFSSPNSTTNAPSPLTHHFLEQ 60
           MI  +I KLSSL   P         FSSISLQKTP ESP S    TTN  SPLT HFLEQ
Sbjct: 1   MIPCRIPKLSSLKLKP---------FSSISLQKTPLESPVS----TTNLASPLTPHFLEQ 60

Query: 61  SARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLLNHLHHQLLDAETLCLAIVIV 120
           SARSSQWHFIKQVES+LTPSLIS+ L NLHESPQ+VLD LNH HH+L DA TLCLAIVIV
Sbjct: 61  SARSSQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIV 120

Query: 121 ARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGV 180
           ARLPSPKP L LLKQA+G GTTNSI EIFE LAASRDRLGFKS IVFD+LIKSCC+MN  
Sbjct: 121 ARLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRA 180

Query: 181 DEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIM 240
           DEAF+CFY MKEKG+LP IETCN LLSL LKLNR EAAWVLYAEMFRLRIKSSVYTFNIM
Sbjct: 181 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 240

Query: 241 INVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNI 300
           INVLCKEGKL KAKDF+GHME+ GVKPN+VTYNTIVHGYCS GRVE ADAIL TMKR+ I
Sbjct: 241 INVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI 300

Query: 301 QPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFA 360
           +PDS+TYGSLISGMCKQGRLEEASKIFEEMVQ GL PSAV YN+LIDGFCNKGNLDMA A
Sbjct: 301 EPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASA 360

Query: 361 YKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYC 420
           YKDEMLKKGI PT+STYN LIHALFMEQ+ DEAE MIKEIQEKG+SPDAITYNILINGYC
Sbjct: 361 YKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYC 420

Query: 421 RCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVI 480
           RC NAKKAF LHD+ML SGI+PTK TYTSL+HVLSKKNRM+EADDLFKKITS+GVLPDVI
Sbjct: 421 RCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVI 480

Query: 481 MFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEM 540
           MFNALIDGHCSN NV+ AFELLKDMDRMKVPPDEVTFNTIMQG CREGKVEEARELF+EM
Sbjct: 481 MFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEM 540

Query: 541 KRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEG 600
           KRRGIKPDH+SFNTLISGYSRRGDIKDAFRVR+EMLD GFNPT LTYN+L++GLCKNQEG
Sbjct: 541 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEG 600

Query: 601 DHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVENEST 642
           D AEELLKEMVSKG+TPDD+TYF+LIEGI K N P EN++T
Sbjct: 601 DLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKNT 628

BLAST of Cla015975 vs. NCBI nr
Match: gi|659109811|ref|XP_008454893.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 1022.3 bits (2642), Expect = 3.6e-295
Identity = 517/610 (84.75%), Postives = 551/610 (90.33%), Query Frame = 1

Query: 1   MIRFKILKLSSLNFNPITNSQSFAPFSSISLQKTPPESPFSSPNSTTNAPSPLTHHFLEQ 60
           MI ++I KLSSL  NP         FSSISL  TP ESP    NS+TNA SPLT HFLEQ
Sbjct: 1   MIPYRIPKLSSLKLNP---------FSSISLHNTPLESP----NSSTNAASPLTPHFLEQ 60

Query: 61  SARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDLLNHLHHQLLDAETLCLAIVIV 120
           SARSSQWHFIKQVESTLTPSLIS+ L NLH+SPQIVLD LNHLHH+L DA TLCLAIVIV
Sbjct: 61  SARSSQWHFIKQVESTLTPSLISQTLLNLHQSPQIVLDFLNHLHHKLPDAHTLCLAIVIV 120

Query: 121 ARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRLGFKSCIVFDHLIKSCCEMNGV 180
           ARLPSPKP L LLKQA+G GTTNSI EIFELLAASRDRLGFKS IVFDHLIKSCC+MN  
Sbjct: 121 ARLPSPKPALHLLKQALGGGTTNSIREIFELLAASRDRLGFKSSIVFDHLIKSCCDMNRA 180

Query: 181 DEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAWVLYAEMFRLRIKSSVYTFNIM 240
           DEA +CFY MKEKGILPKIETCN+LLSL LKLNR EAAWVLYAEMFRLRIKSSVYTFNIM
Sbjct: 181 DEALECFYTMKEKGILPKIETCNNLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIM 240

Query: 241 INVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGYCSRGRVEGADAILNTMKRKNI 300
           INVLCKEGKL KAKDFIGHME+LGVKPNVVTYNTIVHGYC RGRVEGA AIL TMKR+ I
Sbjct: 241 INVLCKEGKLKKAKDFIGHMETLGVKPNVVTYNTIVHGYCLRGRVEGAAAILTTMKRQKI 300

Query: 301 QPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSAVTYNSLIDGFCNKGNLDMAFA 360
            PDS+TYGSLI GMCKQGRLEEASKIFEEMVQ GL P+AV YN+LIDGFCNKGNLDMA A
Sbjct: 301 DPDSFTYGSLICGMCKQGRLEEASKIFEEMVQKGLQPNAVIYNTLIDGFCNKGNLDMASA 360

Query: 361 YKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKEIQEKGMSPDAITYNILINGYC 420
           YKDEMLKKGI PTVSTYN LIHALFMEQ+IDEAEGMI+EIQEKG+SPDAITYNILINGYC
Sbjct: 361 YKDEMLKKGINPTVSTYNSLIHALFMEQRIDEAEGMIEEIQEKGISPDAITYNILINGYC 420

Query: 421 RCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFKKITSKGVLPDVI 480
           RC NAKKAF LH++ML SGI+PTKVTYTSLIHVLSKKNRM+EADDLFKKITS+GVLPD+I
Sbjct: 421 RCANAKKAFRLHNEMLASGIKPTKVTYTSLIHVLSKKNRMKEADDLFKKITSEGVLPDLI 480

Query: 481 MFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEM 540
           MFNALIDGHCSN +V+RAFELLKDMDRMKVPPDEVTFNTIMQG CREGKVEEAR+LF+EM
Sbjct: 481 MFNALIDGHCSNSDVKRAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARQLFDEM 540

Query: 541 KRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEG 600
           KRRGIKPDH+SFNTLISGYSRRGDIKDAFRV++EML+ GFNPT LTYN+LI+GLCKNQEG
Sbjct: 541 KRRGIKPDHISFNTLISGYSRRGDIKDAFRVQNEMLNTGFNPTVLTYNALIQGLCKNQEG 597

Query: 601 DHAEELLKEM 611
           D AEELLKEM
Sbjct: 601 DRAEELLKEM 597

BLAST of Cla015975 vs. NCBI nr
Match: gi|659109811|ref|XP_008454893.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 131.0 bits (328), Expect = 7.7e-27
Identity = 75/231 (32.47%), Postives = 118/231 (51.08%), Query Frame = 1

Query: 409 AITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNRMREADDLFK 468
           +I ++ LI   C    A +A      M   GI P   T  +L+ +  K NR   A  L+ 
Sbjct: 151 SIVFDHLIKSCCDMNRADEALECFYTMKEKGILPKIETCNNLLSLFLKLNRTEAAWVLYA 210

Query: 469 KITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNTIMQGRCREG 528
           ++    +   V  FN +I+  C  G +++A + +  M+ + V P+ VT+NTI+ G C  G
Sbjct: 211 EMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFIGHMETLGVKPNVVTYNTIVHGYCLRG 270

Query: 529 KVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYN 588
           +VE A  +   MKR+ I PD  ++ +LI G  ++G +++A ++ +EM+  G  P  + YN
Sbjct: 271 RVEGAAAILTTMKRQKIDPDSFTYGSLICGMCKQGRLEEASKIFEEMVQKGLQPNAVIYN 330

Query: 589 SLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVENE 640
           +LI G C     D A     EM+ KGI P  STY SLI  +  +    E E
Sbjct: 331 TLIDGFCNKGNLDMASAYKDEMLKKGINPTVSTYNSLIHALFMEQRIDEAE 381


HSP 2 Score: 57.8 bits (138), Expect = 8.2e-05
Identity = 37/142 (26.06%), Postives = 70/142 (49.30%), Query Frame = 1

Query: 488 GHCSNGNVERAFELLK-DMDRMKVPPDEVTFNTIMQGRCREGKVEEARELFNEMKRRGIK 547
           G  +  ++   FELL    DR+      + F+ +++  C   + +EA E F  MK +GI 
Sbjct: 125 GGGTTNSIREIFELLAASRDRLGFK-SSIVFDHLIKSCCDMNRADEALECFYTMKEKGIL 184

Query: 548 PDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIGFNPTRLTYNSLIRGLCKNQEGDHAEEL 607
           P   + N L+S + +    + A+ +  EM  +    +  T+N +I  LCK  +   A++ 
Sbjct: 185 PKIETCNNLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDF 244

Query: 608 LKEMVSKGITPDDSTYFSLIEG 629
           +  M + G+ P+  TY +++ G
Sbjct: 245 IGHMETLGVKPNVVTYNTIVHG 265


HSP 3 Score: 867.8 bits (2241), Expect = 1.1e-248
Identity = 424/602 (70.43%), Postives = 508/602 (84.39%), Query Frame = 1

Query: 40  FSSPNSTTNAPSPLTHHFLEQSARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDL 99
           F+S  S+ + P P+T   + +S  SSQWHFI+QV   LTP+LIS  L NL   PQ+V D 
Sbjct: 35  FNSLASSESTP-PITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDF 94

Query: 100 LNHLHHQLLDAETLCLAIVIVARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRL 159
           ++HLH   LD ++ CLA+V++ARLPSPK  LQLLKQ +G     +  E+F+ L  SRDRL
Sbjct: 95  IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATN-RELFDELTLSRDRL 154

Query: 160 GFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAW 219
             KS IVFD L++ CCE+   DEAFKCFYMMKEKGI+PKIETCND+LSL LKLNR+E AW
Sbjct: 155 SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 214

Query: 220 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGY 279
           VLYAEMFRLRI S+VYTFNIM+NVLCKEGKL KA++FIG ME LG KPNVV+YNTI+HGY
Sbjct: 215 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 274

Query: 280 CSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSA 339
            SRG +EGA  IL+ M+ K I+PDSYTYGSLISGMCK+GRLEEAS +F++MV+IGL+P+A
Sbjct: 275 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 334

Query: 340 VTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKE 399
           VTYN+LIDG+CNKG+L+ AF+Y+DEM+KKGIMP+VSTYNLL+HALFME ++ EA+ MIKE
Sbjct: 335 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 394

Query: 400 IQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNR 459
           +++KG+ PDAITYNILINGY RCGNAKKAF LH++ML  GI PT VTYTSLI+VLS++NR
Sbjct: 395 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 454

Query: 460 MREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNT 519
           M+EADDLF+KI  +GV PDVIMFNA++DGHC+NGNVERAF LLK+MDR  VPPDEVTFNT
Sbjct: 455 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 514

Query: 520 IMQGRCREGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIG 579
           +MQGRCREGKVEEAR L +EMKRRGIKPDH+S+NTLISGY RRGDIKDAFRVRDEML IG
Sbjct: 515 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 574

Query: 580 FNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVENE 639
           FNPT LTYN+LI+ LCKNQEGD AEELLKEMV+KGI+PDDSTY SLIEG+   +  VE+ 
Sbjct: 575 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 634

Query: 640 ST 642
           ++
Sbjct: 635 AS 634

BLAST of Cla015975 vs. NCBI nr
Match: gi|731410547|ref|XP_002269015.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial [Vitis vinifera])

HSP 1 Score: 867.8 bits (2241), Expect = 1.1e-248
Identity = 424/602 (70.43%), Postives = 508/602 (84.39%), Query Frame = 1

Query: 40  FSSPNSTTNAPSPLTHHFLEQSARSSQWHFIKQVESTLTPSLISEALQNLHESPQIVLDL 99
           F+S  S+ + P P+T   + +S  SSQWHFI+QV   LTP+LIS  L NL   PQ+V D 
Sbjct: 61  FNSLASSESTP-PITEEVISKSVLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDF 120

Query: 100 LNHLHHQLLDAETLCLAIVIVARLPSPKPTLQLLKQAVGCGTTNSISEIFELLAASRDRL 159
           ++HLH   LD ++ CLA+V++ARLPSPK  LQLLKQ +G     +  E+F+ L  SRDRL
Sbjct: 121 IHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATN-RELFDELTLSRDRL 180

Query: 160 GFKSCIVFDHLIKSCCEMNGVDEAFKCFYMMKEKGILPKIETCNDLLSLCLKLNRIEAAW 219
             KS IVFD L++ CCE+   DEAFKCFYMMKEKGI+PKIETCND+LSL LKLNR+E AW
Sbjct: 181 SVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 240

Query: 220 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLNKAKDFIGHMESLGVKPNVVTYNTIVHGY 279
           VLYAEMFRLRI S+VYTFNIM+NVLCKEGKL KA++FIG ME LG KPNVV+YNTI+HGY
Sbjct: 241 VLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGY 300

Query: 280 CSRGRVEGADAILNTMKRKNIQPDSYTYGSLISGMCKQGRLEEASKIFEEMVQIGLLPSA 339
            SRG +EGA  IL+ M+ K I+PDSYTYGSLISGMCK+GRLEEAS +F++MV+IGL+P+A
Sbjct: 301 SSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNA 360

Query: 340 VTYNSLIDGFCNKGNLDMAFAYKDEMLKKGIMPTVSTYNLLIHALFMEQKIDEAEGMIKE 399
           VTYN+LIDG+CNKG+L+ AF+Y+DEM+KKGIMP+VSTYNLL+HALFME ++ EA+ MIKE
Sbjct: 361 VTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKE 420

Query: 400 IQEKGMSPDAITYNILINGYCRCGNAKKAFHLHDQMLVSGIRPTKVTYTSLIHVLSKKNR 459
           +++KG+ PDAITYNILINGY RCGNAKKAF LH++ML  GI PT VTYTSLI+VLS++NR
Sbjct: 421 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 480

Query: 460 MREADDLFKKITSKGVLPDVIMFNALIDGHCSNGNVERAFELLKDMDRMKVPPDEVTFNT 519
           M+EADDLF+KI  +GV PDVIMFNA++DGHC+NGNVERAF LLK+MDR  VPPDEVTFNT
Sbjct: 481 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 540

Query: 520 IMQGRCREGKVEEARELFNEMKRRGIKPDHVSFNTLISGYSRRGDIKDAFRVRDEMLDIG 579
           +MQGRCREGKVEEAR L +EMKRRGIKPDH+S+NTLISGY RRGDIKDAFRVRDEML IG
Sbjct: 541 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 600

Query: 580 FNPTRLTYNSLIRGLCKNQEGDHAEELLKEMVSKGITPDDSTYFSLIEGIIKDNNPVENE 639
           FNPT LTYN+LI+ LCKNQEGD AEELLKEMV+KGI+PDDSTY SLIEG+   +  VE+ 
Sbjct: 601 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVEDN 660

Query: 640 ST 642
           ++
Sbjct: 661 AS 660

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP152_ARATH7.3e-20355.64Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidop... [more]
PP360_ARATH1.6e-9330.97Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN... [more]
PPR12_ARATH1.8e-8431.83Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
PP407_ARATH2.6e-8329.78Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN... [more]
PPR27_ARATH1.3e-7934.37Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
D7STD9_VITVI8.0e-24970.43Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0055g00970 PE=4 SV=... [more]
B9RZG0_RICCO1.2e-24168.40Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... [more]
V4SC21_9ROSI8.0e-24164.85Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030406mg PE=4 SV=1[more]
A0A0D2SUK7_GOSRA8.8e-24065.65Uncharacterized protein OS=Gossypium raimondii GN=B456_008G044300 PE=4 SV=1[more]
A0A067LCI3_JATCU5.7e-23964.93Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10026 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659109809|ref|XP_008454892.1|3.7e-30884.24PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
gi|449438705|ref|XP_004137128.1|1.1e-30483.15PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
gi|659109811|ref|XP_008454893.1|3.6e-29584.75PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
gi|659109811|ref|XP_008454893.1|7.7e-2732.47PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
gi|731410547|ref|XP_002269015.2|1.1e-24870.43PREDICTED: pentatricopeptide repeat-containing protein At2g15630, mitochondrial ... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015975Cla015975.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 167..195
score: 7.
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 473..505
score: 1.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 197..246
score: 2.5E-11coord: 407..456
score: 6.4E-15coord: 585..629
score: 7.8E-13coord: 337..384
score: 4.9E-16coord: 512..554
score: 2.4E-16coord: 267..316
score: 3.8
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 445..479
score: 2.0E-7coord: 166..197
score: 1.5E-4coord: 235..269
score: 4.1E-9coord: 376..409
score: 5.4E-7coord: 481..514
score: 5.6E-9coord: 550..582
score: 6.0E-7coord: 586..618
score: 1.1E-10coord: 515..548
score: 6.3E-12coord: 410..443
score: 4.6E-10coord: 340..373
score: 4.6E-9coord: 305..337
score: 4.3E-8coord: 270..304
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 408..442
score: 14.206coord: 163..197
score: 10.26coord: 478..512
score: 12.408coord: 268..302
score: 13.066coord: 303..337
score: 14.162coord: 233..267
score: 12.255coord: 548..582
score: 12.748coord: 443..477
score: 11.203coord: 198..232
score: 8.199coord: 513..547
score: 15.006coord: 583..617
score: 12.967coord: 338..372
score: 12.989coord: 373..407
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 304..578
score: 5.4
NoneNo IPR availableunknownCoilCoilcoord: 383..403
scor
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 8..83
score: 9.4E-250coord: 139..640
score: 9.4E
NoneNo IPR availablePANTHERPTHR24015:SF914SUBFAMILY NOT NAMEDcoord: 8..83
score: 9.4E-250coord: 139..640
score: 9.4E
NoneNo IPR availableunknownSSF81901HCP-likecoord: 299..505
score: 4.9

The following gene(s) are paralogous to this gene:

None