CsGy7G005010 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G005010
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Non-specific lipid-transfer protein-like protein
Location	Chr7 : 3768094 .. 3769457 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATATTTGATTTTTTATAAAAATAAAGTATAATAATAATTAAACATTCCGAAATCTGCTTATTTAAATGACCCTCACCAACTTCAAACCCCACTCCTCACTTCCTCACTTCCTCACTTCCCCACTTCTCCATCTCTCATTTTCCCCTTTACCAATCTTCTCTTTTCTCTGCCATGGCTACCACCAACCCTTTTCTCGCTCTCTTTTCTCTTGCATTCCTCGCACTACAATTCTCCCCCCTTTCCGCCGCAAATGATGCTCCAGCGCCGGGGGTCGACTGTTCTAGTCTCATCCTCAACATGGCCGACTGTCTCTCTTTCGTTTCCAACGACAGCACCACCAGCAAGCCTCAAGGAACCTGCTGTTCTGGCCTCAAGACCGTCCTCAAGGCCGACGCTGACTGTCTTTGCGAAGCCTTCAAGAACAGCGCTCAATTAGGCGTCGTACTCAACGTCACTAAAGCCCTCTCTCTCCCTGCTGCTTGCAAAGTCTCCGCTCCCGCTGCATCTAACTGTAAATGTAAGCCTAATTATTCCTTCCGATAATCGATCTATTAATTTCTGCTTACAACACAAATGCGTATGCAATTAAGTGGTCTGATTGAGTGAAATCCGTGTTTTCTTTTGGTTTTGCAGTGTCGATTTCTCCTGCTTCTTCTCCAGGTACTACATATCTCCTCTTTAAACACTTCCCGTTCAATTTTAGTTTGTTGATTCCGATCTGGAATTCGTAATGTTAATTAATGAAGAAATTTCTGAGCGGTTTGTTGTGTTTGGATGCAGCTGTTACGCCATCAGGTGCTCCAAAATCAGCGGAGGCAGCGTCGCCGGTGGTGAGCGAGCCCACGGGGGCTCCTGCCCCTGGAAAGTCGGGAGCGACGGCGACGGGAGGTTTGGGGTCAGTTGGATCTGTAATGACGGCCATCGGGGTTGCTCTGTTGTGCAGCCTGTGAAGGGGGGGTCGATGATGCGGCGTCGTTTTGGTTGGGAAAAGGGAAATTTGTTAAGTATGCTATTTTATTTCAATTTTTGTGGAAGGGAGAATATTTGTTGGGTTGGGAGTGTTTGATTTTGGGTTTCTCTTGTGGGTATAATTTGTGGTGTGTGACACAAAGCCATCTTATAATATTCTTTTCTTTTTTTACTCTCTATTAGCTCTTGAATAGATCTCTTCTCCATCGTTACATTAATTCATGATATTTCATATTTCTAGTTTATGTTAAAATAATTATGTATACTATTGCATATATGAGTCATGAAATGATGTACACACTTTATTCTCATCACTCATCTAGATGCAGTGTCAATTTAATGTTCATTAAATGATAGGTTTTTGGTATTTAAAATTGGCTCACCTAGTGTTAC

mRNA sequence

AGATATTTGATTTTTTATAAAAATAAAGTATAATAATAATTAAACATTCCGAAATCTGCTTATTTAAATGACCCTCACCAACTTCAAACCCCACTCCTCACTTCCTCACTTCCTCACTTCCCCACTTCTCCATCTCTCATTTTCCCCTTTACCAATCTTCTCTTTTCTCTGCCATGGCTACCACCAACCCTTTTCTCGCTCTCTTTTCTCTTGCATTCCTCGCACTACAATTCTCCCCCCTTTCCGCCGCAAATGATGCTCCAGCGCCGGGGGTCGACTGTTCTAGTCTCATCCTCAACATGGCCGACTGTCTCTCTTTCGTTTCCAACGACAGCACCACCAGCAAGCCTCAAGGAACCTGCTGTTCTGGCCTCAAGACCGTCCTCAAGGCCGACGCTGACTGTCTTTGCGAAGCCTTCAAGAACAGCGCTCAATTAGGCGTCGTACTCAACGTCACTAAAGCCCTCTCTCTCCCTGCTGCTTGCAAAGTCTCCGCTCCCGCTGCATCTAACTGTAAATTGTCGATTTCTCCTGCTTCTTCTCCAGCTGTTACGCCATCAGGTGCTCCAAAATCAGCGGAGGCAGCGTCGCCGGTGGTGAGCGAGCCCACGGGGGCTCCTGCCCCTGGAAAGTCGGGAGCGACGGCGACGGGAGGTTTGGGGTCAGTTGGATCTGTAATGACGGCCATCGGGGTTGCTCTGTTGTGCAGCCTGTGAAGGGGGGGTCGATGATGCGGCGTCGTTTTGGTTGGGAAAAGGGAAATTTGTTAAGTATGCTATTTTATTTCAATTTTTGTGGAAGGGAGAATATTTGTTGGGTTGGGAGTGTTTGATTTTGGGTTTCTCTTGTGGGTATAATTTGTGGTGTGTGACACAAAGCCATCTTATAATATTCTTTTCTTTTTTTACTCTCTATTAGCTCTTGAATAGATCTCTTCTCCATCGTTACATTAATTCATGATATTTCATATTTCTAGTTTATGTTAAAATAATTATGTATACTATTGCATATATGAGTCATGAAATGATGTACACACTTTATTCTCATCACTCATCTAGATGCAGTGTCAATTTAATGTTCATTAAATGATAGGTTTTTGGTATTTAAAATTGGCTCACCTAGTGTTAC

Coding sequence (CDS)

ATGGCTACCACCAACCCTTTTCTCGCTCTCTTTTCTCTTGCATTCCTCGCACTACAATTCTCCCCCCTTTCCGCCGCAAATGATGCTCCAGCGCCGGGGGTCGACTGTTCTAGTCTCATCCTCAACATGGCCGACTGTCTCTCTTTCGTTTCCAACGACAGCACCACCAGCAAGCCTCAAGGAACCTGCTGTTCTGGCCTCAAGACCGTCCTCAAGGCCGACGCTGACTGTCTTTGCGAAGCCTTCAAGAACAGCGCTCAATTAGGCGTCGTACTCAACGTCACTAAAGCCCTCTCTCTCCCTGCTGCTTGCAAAGTCTCCGCTCCCGCTGCATCTAACTGTAAATTGTCGATTTCTCCTGCTTCTTCTCCAGCTGTTACGCCATCAGGTGCTCCAAAATCAGCGGAGGCAGCGTCGCCGGTGGTGAGCGAGCCCACGGGGGCTCCTGCCCCTGGAAAGTCGGGAGCGACGGCGACGGGAGGTTTGGGGTCAGTTGGATCTGTAATGACGGCCATCGGGGTTGCTCTGTTGTGCAGCCTGTGA

Protein sequence

MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQGTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISPASSPAVTPSGAPKSAEAASPVVSEPTGAPAPGKSGATATGGLGSVGSVMTAIGVALLCSL

Homology

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BLAST of CsGy7G005010 vs. NCBI nr
Match: XP_004136865.1 (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus] >KGN43702.1 hypothetical protein Csa_7G061200 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 8.4e-52
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ
Sbjct: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVXXXXXXXXXXXXXX 120
           GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVXXXXXXXXXXXXXX
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSVMTAIGVALLCSL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSVMTAIGVALLCSL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSVMTAIGVALLCSL 180

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BLAST of CsGy7G005010 vs. NCBI nr
Match: XP_008455223.1 (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 6.2e-47
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           MATTN FLA+FSL+FLAL FSPLSAANDAPAP VDCSSLILNMADCLSFVSNDSTT+KPQ
Sbjct: 1   MATTNLFLAIFSLSFLALHFSPLSAANDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 106

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BLAST of CsGy7G005010 vs. NCBI nr
Match: XP_023553599.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177.2 bits (448), Expect = 5.1e-41
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           MAT   FLALFSLA L+L  S +SAA+DAPAP VDCSSLILNMADCLSFVSNDSTT+KP+
Sbjct: 1   MATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKV
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKV 106

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BLAST of CsGy7G005010 vs. NCBI nr
Match: XP_022967631.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima])

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 89/106 (83.96%), Postives = 98/106 (92.45%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           MAT   FLALF+LA L+L  S +SAA+DAPAP VDCSSLILNMADCLSFVSNDSTT+KP+
Sbjct: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKV
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKV 106

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BLAST of CsGy7G005010 vs. NCBI nr
Match: XP_022963887.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata])

HSP 1 Score: 174.5 bits (441), Expect = 3.3e-40
Identity = 88/106 (83.02%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           MAT   FLALF+LA  +L  S +SAA+DAPAP VDCSSLILNMADCLSFVSNDSTT+KP+
Sbjct: 1   MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKV
Sbjct: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKV 106

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BLAST of CsGy7G005010 vs. TAIR10
Match: AT5G64080.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 4.4e-31
Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 1   MATTNPFLA---LFSLAFLAL-QFSPLSAAN---DAPAPGVDCSSLILNMADCLSFVSND 60
           MAT + F A   LF +  L+L   S L A++    APAP VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTSKPQGTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
            T +KP+GTCCSGLKTVLKAD+ CLCEAFK+SA LGV LN+TKA +LPAACK+
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKL 113

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BLAST of CsGy7G005010 vs. TAIR10
Match: AT2G13820.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.1e-24
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 34  VDCSSLILNMADCLSFVSNDSTTSKPQGTCCSGLKTVLKADADCLCEAFKNSAQLGVVLN 93
           VDCSSLILNMADCLSFV++ ST  KP+GTCCSGLKTV++   +CLCEAFKNS  LG+ L+
Sbjct: 25  VDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLD 84

Query: 94  VTKALSLPAACKV 107
           ++KA SLP+ CKV
Sbjct: 85  LSKAASLPSVCKV 97

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BLAST of CsGy7G005010 vs. TAIR10
Match: AT1G36150.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 3.1e-16
Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 0


Query: 22  PLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQGTCCSGLKTVLKADADCLCEA 81
           P  A    P+   DCSS+I +M DCLSF++  ST   P  TCC G+KTVL     CLC A
Sbjct: 31  PSMAPTPQPSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSA 90

Query: 82  FKNSAQLGVVLNVTKALSLPAACKV 107
            ++S ++G VL+ TKAL++P  C V
Sbjct: 91  LESSREMGFVLDDTKALAMPKICNV 115

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BLAST of CsGy7G005010 vs. TAIR10
Match: AT4G08670.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 78.2 bits (191), Expect = 5.8e-15
Identity = 35/89 (39.33%), Postives = 59/89 (66.29%), Query Frame = 0


Query: 21  SPLSAANDAPAPG---VDCSSLILNMADCLSFVSNDSTTSKPQGTCCSGLKTVLKADADC 80
           +P  +   APAPG    DCS++I +M DCL ++   S  +KP+ +CC+G++TVL+ +  C
Sbjct: 30  NPAKSPVGAPAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQC 89

Query: 81  LCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           +C    ++ ++G+ LN T+AL+ P ACK+
Sbjct: 90  ICAGLVSAGEMGIELNSTRALATPKACKL 118

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BLAST of CsGy7G005010 vs. TAIR10
Match: AT5G09370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-12
Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 0


Query: 8   LALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQGTCCSGL 67
           +A FS A  +L    LS ++       DC +L++ +  CL F+S   T   P  +CCS L
Sbjct: 1   MAYFSTA-TSLLLLVLSVSSPYVHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSL 60

Query: 68  KTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           K +L     CLCE  K  A LG+ LNVTK+ +LP ACK+
Sbjct: 61  KNILDTKPICLCEGLK-KAPLGIKLNVTKSATLPVACKL 97

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BLAST of CsGy7G005010 vs. Swiss-Prot
Match: sp|Q8VYI9|NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana OX=3702 GN=At5g64080 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.0e-30
Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 1   MATTNPFLA---LFSLAFLAL-QFSPLSAAN---DAPAPGVDCSSLILNMADCLSFVSND 60
           MAT + F A   LF +  L+L   S L A++    APAP VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTSKPQGTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
            T +KP+GTCCSGLKTVLKAD+ CLCEAFK+SA LGV LN+TKA +LPAACK+
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKL 113

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BLAST of CsGy7G005010 vs. Swiss-Prot
Match: sp|Q9ZQI8|NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana OX=3702 GN=At2g13820 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-23
Identity = 51/73 (69.86%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 34  VDCSSLILNMADCLSFVSNDSTTSKPQGTCCSGLKTVLKADADCLCEAFKNSAQLGVVLN 93
           VDCSSLILNMADCLSFV++ ST  KP+GTCCSGLKTV++   +CLCEAFKNS  LG+ L+
Sbjct: 25  VDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTLD 84

Query: 94  VTKALSLPAACKV 107
           ++KA SLP+ CKV
Sbjct: 85  LSKAASLPSVCKV 97

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BLAST of CsGy7G005010 vs. Swiss-Prot
Match: sp|Q6ASY2|NLTL1_ORYSJ (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-08
Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 0


Query: 24  SAANDAPAPGVDCSSLILNMADCLSFVSNDSTT-SKPQGTCCSGLKTVLK--ADADCLCE 83
           +A++ APAP VDC++  L +ADCL +V+   T  S+P   CC  +K  LK  A   CLC 
Sbjct: 28  TASSPAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPSKLCCGEVKGALKDSAAVGCLCA 87

Query: 84  AFKNSAQLGVVLNVTKALSL 101
           AF  S  L + +N+T+AL L
Sbjct: 88  AF-TSKTLPLPINITRALHL 106

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BLAST of CsGy7G005010 vs. Swiss-Prot
Match: sp|Q9LZH5|LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=3702 GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 0


Query: 18  LQFSPLSAANDAPAPGVDCSSLILNMADCLSFVS--NDSTTSKPQGTCCSGLKTVLKADA 77
           +  SP S  + AP    DC + ++NM  CLS+V+       +KP  TCC  L  ++++  
Sbjct: 24  MDMSPSSGPSGAP----DCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSP 83

Query: 78  DCLCEAFKN--SAQLGVVLNVTKALSLPAACKV 107
            CLC       +AQLG+ ++  KAL LP  C V
Sbjct: 84  QCLCYLLSGDMAAQLGIKIDKAKALKLPGVCGV 112

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BLAST of CsGy7G005010 vs. Swiss-Prot
Match: sp|O64864|YLS3_ARATH (Protein YLS3 OS=Arabidopsis thaliana OX=3702 GN=YLS3 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.5e-07
Identity = 28/72 (38.89%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 35  DCSSLILNMADCLSFVSNDSTTSKPQGTCCSGLKTVLKADADCLCEAF--KNSAQLGVVL 94
           +C++ ++ MA CL +V   + +  P   CCSGLK V+ +D  CLC     +N   LG+ +
Sbjct: 35  ECTAQLVGMATCLPYVQGKAKSPTPD--CCSGLKQVINSDMKCLCMIIQERNDPDLGLQV 94

Query: 95  NVTKALSLPAAC 105
           NV+ AL+LP+ C
Sbjct: 95  NVSLALALPSVC 104

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BLAST of CsGy7G005010 vs. TrEMBL
Match: tr|A0A0A0K5X6|A0A0A0K5X6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G061200 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.5e-52
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ
Sbjct: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVXXXXXXXXXXXXXX 120
           GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVXXXXXXXXXXXXXX
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSVMTAIGVALLCSL 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSVMTAIGVALLCSL
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGSVMTAIGVALLCSL 180

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BLAST of CsGy7G005010 vs. TrEMBL
Match: tr|A0A1S3C000|A0A1S3C000_CUCME (non-specific lipid-transfer protein-like protein At5g64080 OS=Cucumis melo OX=3656 GN=LOC103495438 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.1e-47
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           MATTN FLA+FSL+FLAL FSPLSAANDAPAP VDCSSLILNMADCLSFVSNDSTT+KPQ
Sbjct: 1   MATTNLFLAIFSLSFLALHFSPLSAANDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 106

[Close]

BLAST of CsGy7G005010 vs. TrEMBL
Match: tr|A0A059ASU7|A0A059ASU7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02679 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           M  T   L LF+LA   +  S    ++ AP PGVDCS+L+LNMADCLSFVSN STT KP+
Sbjct: 1   MEATKICLLLFALA-ACVAASAHGVSSGAPPPGVDCSTLVLNMADCLSFVSNGSTTEKPE 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           GTCCSGLKTVLKADA+C+CEAFK+SAQLGVVLNVTKALSLPAACKV
Sbjct: 61  GTCCSGLKTVLKADAECICEAFKSSAQLGVVLNVTKALSLPAACKV 105

[Close]

BLAST of CsGy7G005010 vs. TrEMBL
Match: tr|A0A059AT45|A0A059AT45_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02679 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60
           M  T   L LF+LA   +  S    ++ AP PGVDCS+L+LNMADCLSFVSN STT KP+
Sbjct: 1   MEATKICLLLFALA-ACVAASAHGVSSGAPPPGVDCSTLVLNMADCLSFVSNGSTTEKPE 60

Query: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           GTCCSGLKTVLKADA+C+CEAFK+SAQLGVVLNVTKALSLPAACKV
Sbjct: 61  GTCCSGLKTVLKADAECICEAFKSSAQLGVVLNVTKALSLPAACKV 105

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BLAST of CsGy7G005010 vs. TrEMBL
Match: tr|A0A2P5FNN5|A0A2P5FNN5_9ROSA (Lipid transfer protein/Par allergen OS=Trema orientalis OX=63057 GN=TorRG33x02_049510 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.2e-30
Identity = 69/94 (73.40%), Postives = 80/94 (85.11%), Query Frame = 0


Query: 13  LAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQGTCCSGLKTVLK 72
           + +L +     ++ + APAP VDCSSLILNMADCLSFVSN ST +KP+GTCC+GLKTVLK
Sbjct: 13  VVYLVMGAQGAASGHHAPAPAVDCSSLILNMADCLSFVSNGSTVTKPEGTCCAGLKTVLK 72

Query: 73  ADADCLCEAFKNSAQLGVVLNVTKALSLPAACKV 107
           ADADCLCEAFK+SAQLGVVLN+TKA SLP ACKV
Sbjct: 73  ADADCLCEAFKSSAQLGVVLNITKATSLPQACKV 106

The following BLAST results are available for this feature:

BLAST of CsGy7G005010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136865.1	8.4e-52	100.00	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis s...	[more]
XP_008455223.1	6.2e-47	94.34	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis m...	[more]
XP_023553599.1	5.1e-41	84.91	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita pepo subsp...	[more]
XP_022967631.1	1.1e-40	83.96	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima]	[more]
XP_022963887.1	3.3e-40	83.02	non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata]	[more]

BLAST of CsGy7G005010 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64080.1	4.4e-31	64.60	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G13820.1	1.1e-24	69.86	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G36150.1	3.1e-16	47.06	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT4G08670.1	5.8e-15	39.33	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G09370.1	2.7e-12	40.40	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

BLAST of CsGy7G005010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VYI9\|NLTL5_ARATH	8.0e-30	64.60	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia...	[more]
sp\|Q9ZQI8\|NLTL2_ARATH	1.9e-23	69.86	Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia...	[more]
sp\|Q6ASY2\|NLTL1_ORYSJ	3.0e-08	43.75	Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
sp\|Q9LZH5\|LTPG2_ARATH	1.5e-07	35.48	Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana OX=37...	[more]
sp\|O64864\|YLS3_ARATH	2.5e-07	38.89	Protein YLS3 OS=Arabidopsis thaliana OX=3702 GN=YLS3 PE=2 SV=1	[more]

BLAST of CsGy7G005010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5X6\|A0A0A0K5X6_CUCSA	5.5e-52	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G061200 PE=3 SV=1	[more]
tr\|A0A1S3C000\|A0A1S3C000_CUCME	4.1e-47	94.34	non-specific lipid-transfer protein-like protein At5g64080 OS=Cucumis melo OX=36...	[more]
tr\|A0A059ASU7\|A0A059ASU7_EUCGR	2.9e-32	72.64	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02679 PE=3 SV...	[more]
tr\|A0A059AT45\|A0A059AT45_EUCGR	2.9e-32	72.64	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_I02679 PE=3 SV...	[more]
tr\|A0A2P5FNN5\|A0A2P5FNN5_9ROSA	1.2e-30	73.40	Lipid transfer protein/Par allergen OS=Trema orientalis OX=63057 GN=TorRG33x02_0...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036312	Bifun_inhib/LTP/seed_sf
IPR016140	Bifunc_inhib/LTP/seed_store
IPR000528	Plant_LTP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008289	lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G005010.1	CsGy7G005010.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 180..180
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 34..114 e-value: 3.7E-15 score: 57.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..155
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 1..174
None	No IPR available	PANTHER	PTHR33044:SF27	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 1..174
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 43..106 e-value: 2.56499E-12 score: 57.8219
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 35..51 score: 22.53 coord: 58..72 score: 31.79 coord: 91..108 score: 37.26
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..114 e-value: 1.2E-8 score: 44.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 16..114 e-value: 1.7E-14 score: 53.7
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 34..118

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G005010	Cla006403	Watermelon (97103) v1	cgybwmB521
CsGy7G005010	Csa7G061200	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G005010	MELO3C018657	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G005010	ClCG09G015260	Watermelon (Charleston Gray)	cgybwcgB473
CsGy7G005010	CSPI07G05410	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G005010	CmaCh19G002650	Cucurbita maxima (Rimu)	cgybcmaB949
CsGy7G005010	CmaCh11G016400	Cucurbita maxima (Rimu)	cgybcmaB895
CsGy7G005010	CmoCh19G002860	Cucurbita moschata (Rifu)	cgybcmoB931
CsGy7G005010	Lsi03G007750	Bottle gourd (USVL1VR-Ls)	cgyblsiB489
CsGy7G005010	Cp4.1LG04g07000	Cucurbita pepo (Zucchini)	cgybcpeB969
CsGy7G005010	Cp4.1LG15g02290	Cucurbita pepo (Zucchini)	cgybcpeB914
CsGy7G005010	MELO3C018657.2	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G005010	CsaV3_7G006350	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G005010	Cla97C09G177280	Watermelon (97103) v2	cgybwmbB530
CsGy7G005010	Bhi05G000682	Wax gourd	cgybwgoB632
CsGy7G005010	Carg24568	Silver-seed gourd	carcgybB0643
CsGy7G005010	Carg23982	Silver-seed gourd	carcgybB0731

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G005010	Cucurbita moschata (Rifu)	cgybcmoB881