Cp4.1LG15g02290 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG15g02290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Lipid transfer protein
Location	Cp4.1LG15 : 2170578 .. 2171792 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAAATAGAATAAACATTCCAAAATCTCCCTATTTAAATGGCCCTCACCAACTTCAATCCACACTCCCCACTTCCCCACTTCTCCTTTCCCATTTCCCCCACTGACCTTTCCCTTTCTCTCTTTCCTCTCAGAAATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCTCTCTGGCTGTCTTGTCTCTAGATCTCTCCACTGTCTCCGCCGCTCACGACGCTCCAGCGCCGGCTGTGGACTGCTCCAGCCTCATCCTTAACATGGCCGACTGCCTCTCCTTTGTCTCCAACGACAGTACCACGACCAAGCCCGAAGGATCCTGCTGTACTGGTCTCAAGACTGTCCTCAAAGCCGACGCTGACTGCCTCTGCCAGGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTCTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATGTAAGACTAATTCCTCCAAATCGCTCTTTTAATTTCGATTTTGAGAAAAATGAAACCCTAGGTAAATGAGGAACTGATCTATTTGAGTGAAATCTTTGATTTCTTTTTGTTTTCTCAGTGTCGAACTCTCCTGCTAGTTCTCCTGGTACGATTTCTTCTCTAAACGCTTTTCGATTAGTCTTAATCTTAGTCTGTTGATACCGATCTGGATTTCGGAATGTTTGTGAGGAAATGTCTGAGCGTTTATTCTATTTGCATGCAGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCAGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGTTGTCAGTTGGATCTGTAATCGGCGCCATAGGAGTTGCTCTGTTGAGCAGTTTCTGAGGGGCATGCGACGTCGTTTTGGTTGGGAGAAAAGGAGAATTTGGGGAAAATTAAATTTGTTTTCTGTGTTTCTATTCTGTGGAAGGGAAAATTTGTTGGCAGTGTTTGGCTTTGGGTTCCTTTCTCTATGGGTATAATTTGTGGCGTGTGACTCAAAGCAGATTATAATATTTAATTTTTTAGTCTTTCAAATCCGTTCAGTTATTATTCCTTTTATTATTATTTTGCTTAAATTAAATATTTACTCA

mRNA sequence

TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAAATAGAATAAACATTCCAAAATCTCCCTATTTAAATGGCCCTCACCAACTTCAATCCACACTCCCCACTTCCCCACTTCTCCTTTCCCATTTCCCCCACTGACCTTTCCCTTTCTCTCTTTCCTCTCAGAAATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCTCTCTGGCTGTCTTGTCTCTAGATCTCTCCACTGTCTCCGCCGCTCACGACGCTCCAGCGCCGGCTGTGGACTGCTCCAGCCTCATCCTTAACATGGCCGACTGCCTCTCCTTTGTCTCCAACGACAGTACCACGACCAAGCCCGAAGGATCCTGCTGTACTGGTCTCAAGACTGTCCTCAAAGCCGACGCTGACTGCCTCTGCCAGGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTCTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATTGTCGAACTCTCCTGCTAGTTCTCCTGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCAGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGTTGTCAGTTGGATCTGTAATCGGCGCCATAGGAGTTGCTCTGTTGAGCAGTTTCTGAGGGGCATGCGACGTCGTTTTGGTTGGGAGAAAAGGAGAATTTGGGGAAAATTAAATTTGTTTTCTGTGTTTCTATTCTGTGGAAGGGAAAATTTGTTGGCAGTGTTTGGCTTTGGGTTCCTTTCTCTATGGGTATAATTTGTGGCGTGTGACTCAAAGCAGATTATAATATTTAATTTTTTAGTCTTTCAAATCCGTTCAGTTATTATTCCTTTTATTATTATTTTGCTTAAATTAAATATTTACTCA

Coding sequence (CDS)

ATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCTCTCTGGCTGTCTTGTCTCTAGATCTCTCCACTGTCTCCGCCGCTCACGACGCTCCAGCGCCGGCTGTGGACTGCTCCAGCCTCATCCTTAACATGGCCGACTGCCTCTCCTTTGTCTCCAACGACAGTACCACGACCAAGCCCGAAGGATCCTGCTGTACTGGTCTCAAGACTGTCCTCAAAGCCGACGCTGACTGCCTCTGCCAGGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTCTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATTGTCGAACTCTCCTGCTAGTTCTCCTGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCAGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGTTGTCAGTTGGATCTGTAATCGGCGCCATAGGAGTTGCTCTGTTGAGCAGTTTCTGA

Protein sequence

MATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVIGAIGVALLSSF

Homology

[Close]

BLAST of Cp4.1LG15g02290 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.9e-31
Identity = 92/187 (49.20%), Postives = 123/187 (65.78%), Query Frame = 1


Query: 1   MATAKLFLA---LFSLAVLSLD-LSTVSAAHD---APAPAVDCSSLILNMADCLSFVSND 60
           MAT   F A   LF + +LSL  +S + A+H    APAP+VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            T  KPEG+CC+GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ + 
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIAT 120

Query: 121 CKLSNSPASSPAIAP---ANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVIGAI 178
           C LS +P+++P +AP   A  P++   +AP        P  G   ++    S  +V+ A+
Sbjct: 121 CGLSVAPSTAPGLAPGVAAAGPETAGFLAP-------NPSSGNDGSSLIPTSFTTVLSAV 180

[Close]

BLAST of Cp4.1LG15g02290 vs. Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.1e-26
Identity = 79/148 (53.38%), Postives = 104/148 (70.27%), Query Frame = 1


Query: 33  AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVL 92
           AVDCSSLILNMADCLSFV++ ST  KPEG+CC+GLKTV++   +CLC+AFKNS  LG+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 93  NVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAPANSPKSEAAIAPAVNEPTAAPGPG 152
           +++KA SLP+ CKV+AP ++ C LS S    PA AP  SP + A  APA++    A  P 
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGLSVS-GDPPATAPGLSPTAGAG-APALSSGANAATPV 143

Query: 153 KS--AATGAMLSVGSVIGAIGVALLSSF 179
            S  ++  ++LSV S    I +AL+SSF
Sbjct: 144 SSPRSSDASLLSV-SFAFVIFMALISSF 168

[Close]

BLAST of Cp4.1LG15g02290 vs. Swiss-Prot
Match: NLTL1_ORYSJ (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-12
Identity = 71/183 (38.80%), Postives = 95/183 (51.91%), Query Frame = 1


Query: 2   ATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT-TKPE 61
           A     L +   AV  +D +T S+   APAPAVDC++  L +ADCL +V+   T  ++P 
Sbjct: 8   AAVACLLVVGLAAVAGVDGATASSP--APAPAVDCTAEALKLADCLDYVTPGKTAPSRPS 67

Query: 62  GSCCTGLKTVLK--ADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSN 121
             CC  +K  LK  A   CLC AF  S  L + +N+T+AL LPAAC   A A S C    
Sbjct: 68  KLCCGEVKGALKDSAAVGCLCAAF-TSKTLPLPINITRALHLPAACGADASAFSKCL--- 127

Query: 122 SPASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVI---GAIGVALL 179
           +PA SP++AP  S  S  A         AAP  G +AA   M S  +V+    A+   LL
Sbjct: 128 APAPSPSVAPGTSSGSGGA--------AAAPAKGAAAARSPMASTTAVLVVAAAVAAPLL 176

[Close]

BLAST of Cp4.1LG15g02290 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 7.1e-07
Identity = 45/140 (32.14%), Postives = 67/140 (47.86%), Query Frame = 1


Query: 30  PAPAVDCSSLILNMADCLSFVS--NDSTTTKPEGSCCTGLKTVLKADADCLCQAFKN--S 89
           P+ A DC + ++NM  CLS+V+        KP+ +CC  L  ++++   CLC       +
Sbjct: 32  PSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMA 91

Query: 90  AQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSP------AIAPANSPKSEAAIA 149
           AQLG+ ++  KAL LP  C V  P  S C L   P  +P        +PA +P S +   
Sbjct: 92  AQLGIKIDKAKALKLPGVCGVITPDPSLCSLFGIPVGAPVAMGDEGASPAYAPGSMSGA- 151

Query: 150 PAVNEPTAAPGPGKSAATGA 160
               E     G G SA+ G+
Sbjct: 152 ----ESPGGFGSGPSASRGS 166

[Close]

BLAST of Cp4.1LG15g02290 vs. TrEMBL
Match: A0A0A0K5X6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061200 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 5.4e-62
Identity = 140/179 (78.21%), Postives = 155/179 (86.59%), Query Frame = 1


Query: 1   MATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT   FLALFSLA L+L  S +SAA+DAPAP VDCSSLILNMADCLSFVSNDSTT+KP+
Sbjct: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 ASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKS--AATGAMLSVGSVIGAIGVALLSS 178
           ASSPA+ P+ +PKS  A +P V+EPT AP PGKS   ATG + SVGSV+ AIGVALL S
Sbjct: 121 ASSPAVTPSGAPKSAEAASPVVSEPTGAPAPGKSGATATGGLGSVGSVMTAIGVALLCS 179

[Close]

BLAST of Cp4.1LG15g02290 vs. TrEMBL
Match: W9RLU9_9ROSA (Non-specific lipid-transfer protein-like protein OS=Morus notabilis GN=L484_024132 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-40
Identity = 107/179 (59.78%), Postives = 135/179 (75.42%), Query Frame = 1


Query: 8   LALF-SLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTG 67
           +ALF  L+ L L      A+H APAPAVDCS+LILNMADCLSFVSN ST T PEG+CC G
Sbjct: 9   IALFLCLSALVLANHAQGASHHAPAPAVDCSNLILNMADCLSFVSNGSTVTTPEGTCCNG 68

Query: 68  LKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAI 127
           LKTVLKADA+CLC+AFK+SAQLGVVLNVTKA++LP ACKVSAP+A+NC LS +P+ +PA+
Sbjct: 69  LKTVLKADANCLCEAFKSSAQLGVVLNVTKAMTLPTACKVSAPSAANCGLSITPSGAPAL 128

Query: 128 APANSPKSEAAIAP-----AVNE--PTAAPGPGKSAATGAMLSVGSVIGAIGVALLSSF 179
           +P  S  +  A+AP     A+NE  P +APG G+S ++   +SV S++  + VA LS F
Sbjct: 129 SPTESAPASTAVAPASGIGAINEQAPASAPG-GQSGSSVLTISVKSLLVGLVVASLSCF 186

[Close]

BLAST of Cp4.1LG15g02290 vs. TrEMBL
Match: M5XFT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012494mg PE=3 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.9e-38
Identity = 98/159 (61.64%), Postives = 117/159 (73.58%), Query Frame = 1


Query: 24  SAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFK 83
           S+ H APAPAVDCSSLILNMADCLSFVSN ST TKP G+CC+GLKTVLKADA CLC+AFK
Sbjct: 9   SSHHAAPAPAVDCSSLILNMADCLSFVSNGSTDTKPAGTCCSGLKTVLKADAACLCEAFK 68

Query: 84  NSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAPANSPKSEAAIAP--- 143
           +SAQLGVVLN+TKA SLPAACKVSAP+A+NC LS +P ++P ++P +SP S  A  P   
Sbjct: 69  SSAQLGVVLNITKAASLPAACKVSAPSATNCGLSITPVAAPGLSPGSSPTSSVAATPESS 128

Query: 144 -AVNEPTAAPGPGKSAATGAMLSVGSVIGAIGVALLSSF 179
              +E   A  PG S +     SVGS++  + VA    F
Sbjct: 129 VGGSEQAPASPPGASGSLMLASSVGSLLVGLVVASFPCF 167

[Close]

BLAST of Cp4.1LG15g02290 vs. TrEMBL
Match: B9SWA9_RICCO (Lipid binding protein, putative OS=Ricinus communis GN=RCOM_0266100 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-37
Identity = 100/186 (53.76%), Postives = 129/186 (69.35%), Query Frame = 1


Query: 2   ATAKLFLALFSL-AVLSLDLSTVSAAHDAPAPA--------VDCSSLILNMADCLSFVSN 61
           A     L +FS+ AV++++ +T   A  APAPA        VDCS+L+LNMADCLS+VSN
Sbjct: 4   AVVSAVLCIFSIWAVVAVNGATPHHAATAPAPAQAPASSSGVDCSTLVLNMADCLSYVSN 63

Query: 62  DSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAS 121
           DSTTTKPE +CC+GLKTVLK DA CLC+AFK+SAQLGVVLNVTKALSLP+ACK+ AP+ S
Sbjct: 64  DSTTTKPEKTCCSGLKTVLKTDAQCLCEAFKSSAQLGVVLNVTKALSLPSACKIHAPSVS 123

Query: 122 NCKLSNSPASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVIGAIGV 179
           NC L+ +PA +P  +P  S  S   + P  N+   AP P +  A G  +SVG+++    +
Sbjct: 124 NCGLALTPAGAPGASP--STASAPTVFPGANQQAPAPSPAEGGAHGLTISVGTLVIGFVI 183

[Close]

BLAST of Cp4.1LG15g02290 vs. TrEMBL
Match: A0A0S3R078_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G156500 PE=3 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 7.8e-37
Identity = 98/186 (52.69%), Postives = 133/186 (71.51%), Query Frame = 1


Query: 1   MATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MA+   F+  F +A+ ++DL+  +++H APAP+VDCS+L+L MADCLSFV+N ST TKPE
Sbjct: 1   MASKLSFMVCF-MALCAIDLAQSASSHQAPAPSVDCSTLVLTMADCLSFVTNGSTITKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLK+VLK+   CLC+AFK+SAQ GV+LNVTKA SLPAACKVSAP+A+NC LS SP
Sbjct: 61  GTCCSGLKSVLKSAPVCLCEAFKSSAQFGVILNVTKATSLPAACKVSAPSAANCGLSESP 120

Query: 121 ASSPA--IAPANSPKSEAAIAPA------VNEPTAAPGPGKSAATGAMLSVGSVIGAIGV 179
            ++PA  ++P  SP  +A+ A +       NE + AP P K  A    +S G+++  I V
Sbjct: 121 VAAPAGGVSPKASPSPQASGASSSGVHGPANEVSPAPAPAKGNAASFPISAGTLLVGILV 180

[Close]

BLAST of Cp4.1LG15g02290 vs. TAIR10
Match: AT5G64080.1 (AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 137.1 bits (344), Expect = 1.0e-32
Identity = 92/187 (49.20%), Postives = 123/187 (65.78%), Query Frame = 1


Query: 1   MATAKLFLA---LFSLAVLSLD-LSTVSAAHD---APAPAVDCSSLILNMADCLSFVSND 60
           MAT   F A   LF + +LSL  +S + A+H    APAP+VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            T  KPEG+CC+GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ + 
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIAT 120

Query: 121 CKLSNSPASSPAIAP---ANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVIGAI 178
           C LS +P+++P +AP   A  P++   +AP        P  G   ++    S  +V+ A+
Sbjct: 121 CGLSVAPSTAPGLAPGVAAAGPETAGFLAP-------NPSSGNDGSSLIPTSFTTVLSAV 180

[Close]

BLAST of Cp4.1LG15g02290 vs. TAIR10
Match: AT2G13820.1 (AT2G13820.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 119.8 bits (299), Expect = 1.7e-27
Identity = 79/148 (53.38%), Postives = 104/148 (70.27%), Query Frame = 1


Query: 33  AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVL 92
           AVDCSSLILNMADCLSFV++ ST  KPEG+CC+GLKTV++   +CLC+AFKNS  LG+ L
Sbjct: 24  AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTVVRTGPECLCEAFKNSGSLGLTL 83

Query: 93  NVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAPANSPKSEAAIAPAVNEPTAAPGPG 152
           +++KA SLP+ CKV+AP ++ C LS S    PA AP  SP + A  APA++    A  P 
Sbjct: 84  DLSKAASLPSVCKVAAPPSARCGLSVS-GDPPATAPGLSPTAGAG-APALSSGANAATPV 143

Query: 153 KS--AATGAMLSVGSVIGAIGVALLSSF 179
            S  ++  ++LSV S    I +AL+SSF
Sbjct: 144 SSPRSSDASLLSV-SFAFVIFMALISSF 168

[Close]

BLAST of Cp4.1LG15g02290 vs. TAIR10
Match: AT1G36150.1 (AT1G36150.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.6e-17
Identity = 52/127 (40.94%), Postives = 72/127 (56.69%), Query Frame = 1


Query: 30  PAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLG 89
           P+ + DCSS+I +M DCLSF++  ST   P  +CC G+KTVL     CLC A ++S ++G
Sbjct: 39  PSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMG 98

Query: 90  VVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAPANSPKSEAAIAPAVNEPTAAP 149
            VL+ TKAL++P  C V  P   NC +S   AS+P             ++P V  PT +P
Sbjct: 99  FVLDDTKALAMPKICNV--PIDPNCDVSTPAASTP-------------VSPPVESPTTSP 150

Query: 150 GPGKSAA 157
              KS A
Sbjct: 159 SSAKSPA 150

[Close]

BLAST of Cp4.1LG15g02290 vs. TAIR10
Match: AT4G08670.1 (AT4G08670.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 86.3 bits (212), Expect = 2.1e-17
Identity = 52/134 (38.81%), Postives = 80/134 (59.70%), Query Frame = 1


Query: 29  APAP---AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNS 88
           APAP   + DCS++I +M DCL ++   S  TKPE SCCTG++TVL+ +  C+C    ++
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 89  AQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAPANSPKSEAAIAPAVNEP 148
            ++G+ LN T+AL+ P ACK+S  A  +C +  S A++P  +P         ++P+   P
Sbjct: 98  GEMGIELNSTRALATPKACKLSI-APPHCGIITSGATTPGASP---------VSPSAGAP 157

Query: 149 TAAPGPGKSAATGA 160
           T +P   KS  T A
Sbjct: 158 TTSPSAAKSPETSA 161

[Close]

BLAST of Cp4.1LG15g02290 vs. TAIR10
Match: AT5G09370.1 (AT5G09370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13
Identity = 56/146 (38.36%), Postives = 76/146 (52.05%), Query Frame = 1


Query: 8   LALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGL 67
           +A FS A  SL L  +S +      A DC +L++ +  CL F+S   T   P  SCC+ L
Sbjct: 1   MAYFSTAT-SLLLLVLSVSSPYVHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSL 60

Query: 68  KTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAIA 127
           K +L     CLC+  K  A LG+ LNVTK+ +LP ACK++AP  S C   + P +SP  A
Sbjct: 61  KNILDTKPICLCEGLK-KAPLGIKLNVTKSATLPVACKLNAPPVSAC--DSLPPASPPTA 120

Query: 128 PANSPKSEAAIAPAVNEPTAAPGPGK 154
              +P   +  AP       AP P K
Sbjct: 121 NGQAPVWGSGWAP-------APSPSK 135

[Close]

BLAST of Cp4.1LG15g02290 vs. NCBI nr
Match: gi|659110437|ref|XP_008455223.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis melo])

HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65
Identity = 142/177 (80.23%), Postives = 158/177 (89.27%), Query Frame = 1


Query: 1   MATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT  LFLA+FSL+ L+L  S +SAA+DAPAPAVDCSSLILNMADCLSFVSNDSTTTKP+
Sbjct: 1   MATTNLFLAIFSLSFLALHFSPLSAANDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 ASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMLSVGSVIGAIGVALLSS 178
           ASSPA+ P+ +PKS  A +P +NEPT AP PGKS ATGA+ SVGSV+ AIGVALL S
Sbjct: 121 ASSPAVTPSATPKSAEAASPVMNEPTGAPAPGKSGATGALASVGSVMAAIGVALLCS 177

[Close]

BLAST of Cp4.1LG15g02290 vs. NCBI nr
Match: gi|449438175|ref|XP_004136865.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 7.7e-62
Identity = 140/179 (78.21%), Postives = 155/179 (86.59%), Query Frame = 1


Query: 1   MATAKLFLALFSLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT   FLALFSLA L+L  S +SAA+DAPAP VDCSSLILNMADCLSFVSNDSTT+KP+
Sbjct: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 ASSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKS--AATGAMLSVGSVIGAIGVALLSS 178
           ASSPA+ P+ +PKS  A +P V+EPT AP PGKS   ATG + SVGSV+ AIGVALL S
Sbjct: 121 ASSPAVTPSGAPKSAEAASPVVSEPTGAPAPGKSGATATGGLGSVGSVMTAIGVALLCS 179

[Close]

BLAST of Cp4.1LG15g02290 vs. NCBI nr
Match: gi|703127431|ref|XP_010103830.1| (Non-specific lipid-transfer protein-like protein [Morus notabilis])

HSP 1 Score: 173.3 bits (438), Expect = 3.7e-40
Identity = 107/179 (59.78%), Postives = 135/179 (75.42%), Query Frame = 1


Query: 8   LALF-SLAVLSLDLSTVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTG 67
           +ALF  L+ L L      A+H APAPAVDCS+LILNMADCLSFVSN ST T PEG+CC G
Sbjct: 9   IALFLCLSALVLANHAQGASHHAPAPAVDCSNLILNMADCLSFVSNGSTVTTPEGTCCNG 68

Query: 68  LKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAI 127
           LKTVLKADA+CLC+AFK+SAQLGVVLNVTKA++LP ACKVSAP+A+NC LS +P+ +PA+
Sbjct: 69  LKTVLKADANCLCEAFKSSAQLGVVLNVTKAMTLPTACKVSAPSAANCGLSITPSGAPAL 128

Query: 128 APANSPKSEAAIAP-----AVNE--PTAAPGPGKSAATGAMLSVGSVIGAIGVALLSSF 179
           +P  S  +  A+AP     A+NE  P +APG G+S ++   +SV S++  + VA LS F
Sbjct: 129 SPTESAPASTAVAPASGIGAINEQAPASAPG-GQSGSSVLTISVKSLLVGLVVASLSCF 186

[Close]

BLAST of Cp4.1LG15g02290 vs. NCBI nr
Match: gi|645224006|ref|XP_008218904.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Prunus mume])

HSP 1 Score: 168.7 bits (426), Expect = 9.2e-39
Identity = 103/174 (59.20%), Postives = 125/174 (71.84%), Query Frame = 1


Query: 13  LAVLSLDLSTV----SAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLK 72
           L V+++ L+T     S+ H APAPAVDCS+LILNMADCLSFVSN ST TKP G+CC+GLK
Sbjct: 10  LVVMAVALATFGECGSSHHAAPAPAVDCSTLILNMADCLSFVSNGSTDTKPAGTCCSGLK 69

Query: 73  TVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAP 132
           TVLKADA CLC+AFK+SAQLGVVLN+TKA SLPAACKVSAP+A+NC LS +PA +P ++P
Sbjct: 70  TVLKADAACLCEAFKSSAQLGVVLNITKAASLPAACKVSAPSATNCGLSITPAGAPGLSP 129

Query: 133 ANSPKSEAAIAP----AVNEPTAAPGPGKSAATGAMLSVGSVIGAIGVALLSSF 179
            +SP S  A  P      NE   A  PG S +     SVGS++  + VA    F
Sbjct: 130 GSSPTSSVAATPESSAGGNEQAPASPPGASGSLMLASSVGSLLVGLVVASFPCF 183

[Close]

BLAST of Cp4.1LG15g02290 vs. NCBI nr
Match: gi|596197351|ref|XP_007223600.1| (hypothetical protein PRUPE_ppa012494mg [Prunus persica])

HSP 1 Score: 167.2 bits (422), Expect = 2.7e-38
Identity = 98/159 (61.64%), Postives = 117/159 (73.58%), Query Frame = 1


Query: 24  SAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFK 83
           S+ H APAPAVDCSSLILNMADCLSFVSN ST TKP G+CC+GLKTVLKADA CLC+AFK
Sbjct: 9   SSHHAAPAPAVDCSSLILNMADCLSFVSNGSTDTKPAGTCCSGLKTVLKADAACLCEAFK 68

Query: 84  NSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPASSPAIAPANSPKSEAAIAP--- 143
           +SAQLGVVLN+TKA SLPAACKVSAP+A+NC LS +P ++P ++P +SP S  A  P   
Sbjct: 69  SSAQLGVVLNITKAASLPAACKVSAPSATNCGLSITPVAAPGLSPGSSPTSSVAATPESS 128

Query: 144 -AVNEPTAAPGPGKSAATGAMLSVGSVIGAIGVALLSSF 179
              +E   A  PG S +     SVGS++  + VA    F
Sbjct: 129 VGGSEQAPASPPGASGSLMLASSVGSLLVGLVVASFPCF 167

The following BLAST results are available for this feature:

BLAST of Cp4.1LG15g02290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTL5_ARATH	1.9e-31	49.20	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia...	[more]
NLTL2_ARATH	3.1e-26	53.38	Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia...	[more]
NLTL1_ORYSJ	1.9e-12	38.80	Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LT...	[more]
LTPG2_ARATH	7.1e-07	32.14	Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT...	[more]

BLAST of Cp4.1LG15g02290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5X6_CUCSA	5.4e-62	78.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061200 PE=3 SV=1	[more]
W9RLU9_9ROSA	2.6e-40	59.78	Non-specific lipid-transfer protein-like protein OS=Morus notabilis GN=L484_0241...	[more]
M5XFT3_PRUPE	1.9e-38	61.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012494mg PE=3 SV=1	[more]
B9SWA9_RICCO	2.1e-37	53.76	Lipid binding protein, putative OS=Ricinus communis GN=RCOM_0266100 PE=3 SV=1	[more]
A0A0S3R078_PHAAN	7.8e-37	52.69	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G156500 PE=...	[more]

BLAST of Cp4.1LG15g02290 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64080.1	1.0e-32	49.20	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G13820.1	1.7e-27	53.38	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G36150.1	1.6e-17	40.94	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G08670.1	2.1e-17	38.81	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G09370.1	4.1e-13	38.36	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of Cp4.1LG15g02290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110437\|ref\|XP_008455223.1\|	2.0e-65	80.23	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis m...	[more]
gi\|449438175\|ref\|XP_004136865.1\|	7.7e-62	78.21	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis s...	[more]
gi\|703127431\|ref\|XP_010103830.1\|	3.7e-40	59.78	Non-specific lipid-transfer protein-like protein [Morus notabilis]	[more]
gi\|645224006\|ref\|XP_008218904.1\|	9.2e-39	59.20	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Prunus mu...	[more]
gi\|596197351\|ref\|XP_007223600.1\|	2.7e-38	61.64	hypothetical protein PRUPE_ppa012494mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR000528	Plant_LTP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0008289	lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG15g02290.1	Cp4.1LG15g02290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 58..72 score: 2.4E-6coord: 35..51 score: 2.4E-6coord: 91..108 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 24..114 score: 1.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..114 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..116 score: 2.09
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 34..116 score: 2.8
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 6..175 score: 2.7
None	No IPR available	PANTHER	PTHR33044:SF27	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..175 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG15g02290	Cucsa.217810	Cucumber (Gy14) v1	cgycpeB0595
Cp4.1LG15g02290	CmaCh11G016400	Cucurbita maxima (Rimu)	cmacpeB120
Cp4.1LG15g02290	CmaCh19G002650	Cucurbita maxima (Rimu)	cmacpeB522
Cp4.1LG15g02290	CmoCh19G002860	Cucurbita moschata (Rifu)	cmocpeB481
Cp4.1LG15g02290	Cla006403	Watermelon (97103) v1	cpewmB243
Cp4.1LG15g02290	Csa7G061200	Cucumber (Chinese Long) v2	cpecuB261
Cp4.1LG15g02290	MELO3C018657	Melon (DHL92) v3.5.1	cpemeB217
Cp4.1LG15g02290	ClCG09G015260	Watermelon (Charleston Gray)	cpewcgB221
Cp4.1LG15g02290	CSPI07G05410	Wild cucumber (PI 183967)	cpecpiB262
Cp4.1LG15g02290	Lsi03G007750	Bottle gourd (USVL1VR-Ls)	cpelsiB206
Cp4.1LG15g02290	MELO3C018657.2	Melon (DHL92) v3.6.1	cpemedB256
Cp4.1LG15g02290	CsaV3_7G006350	Cucumber (Chinese Long) v3	cpecucB0326
Cp4.1LG15g02290	Bhi05G000682	Wax gourd	cpewgoB0329
Cp4.1LG15g02290	CsGy7G005010	Cucumber (Gy14) v2	cgybcpeB914
Cp4.1LG15g02290	Carg23982	Silver-seed gourd	carcpeB1034
Cp4.1LG15g02290	Carg24568	Silver-seed gourd	carcpeB0919

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG15g02290	Cp4.1LG04g07000	Cucurbita pepo (Zucchini)	cpecpeB268

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG15g02290	Cucurbita moschata (Rifu)	cmocpeB094