CmaCh19G002650 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G002650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Protease inhibitor/seed storage/lipid transfer protein family protein
Location	Cma_Chr19 : 1897933 .. 1899093 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTCCCCACTTCCCCACTTCCCCACTTCTCCTTTCCCATTTCCCCACTGACCTTTCCCTTTCTCTCTTTCCTCTCAGAAATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCGCTCTGGCTGTCTTGTCTCTAGATCTCTCCGCTGTCTCCGCCGCTCACGACGCTCCAGCGCCGGCCGTGGACTGCTCCAGCCTCATCCTTAACATGGCTGACTGCCTCTCCTTCGTCTCAAACGACAGTACCACCACCAAGCCCGAAGGATCCTGCTGCACCGGCCTCAAGACTGTCCTCAAAGCCGACGCTGACTGCCTCTGCCAAGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATGTAAGGCTAATTCCTTCAAATCGCTCTTTCAATTTCGATTTTCAGAAAAATGAAACCCTAGGTAAATTAAGAACTGGTCTATTTAAGTGAAATCTTTGATTTCTTTTTGTTTTCTCAGTGTCGAACTCTCCTGCTGGTCCTCCTGGTACGATTTCTTCTCTAAACGCTTTTCGATTAGTCTTAATCTAAGTCTGATGATACCGATCTGGATTTCGGAATGTTTGTGAGGAAATATCTGAGCGTTTATTCTATTTGCATGCAGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCGGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGGTGTCAATTGGATCTGTAATCGGCGCCATAGGAGTTACTCTGTTGAGAAGTTTCTGAGGGGGATATGCGGCGTCGTTTTGGTTGGGAGAAAAGGAGAATTTGGGGAAAATTAAATTTGTTTTGTGTGTTTTTATTTTGTGGAAGGAAAAATTTGTTGGCGGTGTTTGGTTTTGGGTTCCTTTCTCTATGGGTATAATTTGTGGCGTGTGACTCAAAGCAGATTATAATATTTAATTTTTTAGTCTTTCAAATCCGTTCAGTTATTATTCCTTTTATTATTATTTTGCTTAAATTAAATATTTACTCATCAACTTTTGTGTACTTATTTTAATTTTTTAAAATTTTAAATTCGTAAGGAATATATTA

mRNA sequence

CACTCCCCACTTCCCCACTTCCCCACTTCTCCTTTCCCATTTCCCCACTGACCTTTCCCTTTCTCTCTTTCCTCTCAGAAATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCGCTCTGGCTGTCTTGTCTCTAGATCTCTCCGCTGTCTCCGCCGCTCACGACGCTCCAGCGCCGGCCGTGGACTGCTCCAGCCTCATCCTTAACATGGCTGACTGCCTCTCCTTCGTCTCAAACGACAGTACCACCACCAAGCCCGAAGGATCCTGCTGCACCGGCCTCAAGACTGTCCTCAAAGCCGACGCTGACTGCCTCTGCCAAGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATTGTCGAACTCTCCTGCTGGTCCTCCTGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCGGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGGTGTCAATTGGATCTGTAATCGGCGCCATAGGAGTTACTCTGTTGAGAAGTTTCTGAGGGGGATATGCGGCGTCGTTTTGGTTGGGAGAAAAGGAGAATTTGGGGAAAATTAAATTTGTTTTGTGTGTTTTTATTTTGTGGAAGGAAAAATTTGTTGGCGGTGTTTGGTTTTGGGTTCCTTTCTCTATGGGTATAATTTGTGGCGTGTGACTCAAAGCAGATTATAATATTTAATTTTTTAGTCTTTCAAATCCGTTCAGTTATTATTCCTTTTATTATTATTTTGCTTAAATTAAATATTTACTCATCAACTTTTGTGTACTTATTTTAATTTTTTAAAATTTTAAATTCGTAAGGAATATATTA

Coding sequence (CDS)

ATGGCCACCGCCAAGCTTTTTCTCGCTCTCTTCGCTCTGGCTGTCTTGTCTCTAGATCTCTCCGCTGTCTCCGCCGCTCACGACGCTCCAGCGCCGGCCGTGGACTGCTCCAGCCTCATCCTTAACATGGCTGACTGCCTCTCCTTCGTCTCAAACGACAGTACCACCACCAAGCCCGAAGGATCCTGCTGCACCGGCCTCAAGACTGTCCTCAAAGCCGACGCTGACTGCCTCTGCCAAGCCTTCAAGAACAGTGCACAATTAGGCGTCGTCCTTAACGTCACCAAGGCTCTTTCTCTCCCTGCCGCTTGCAAAGTCTCTGCTCCTGCTGCTTCTAACTGTAAATTGTCGAACTCTCCTGCTGGTCCTCCTGCGATTGCGCCGGCAAACTCGCCAAAATCGGAGGCGGCGATTGCACCGGCGGTGAACGAGCCGACGGCGGCTCCGGGACCTGGAAAGTCGGCAGCGACGGGAGCGATGGTGTCAATTGGATCTGTAATCGGCGCCATAGGAGTTACTCTGTTGAGAAGTTTCTGA

Protein sequence

MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF

Homology

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BLAST of CmaCh19G002650 vs. Swiss-Prot
Match: NLTL5_ARATH (Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thaliana GN=At5g64080 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-31
Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 1


Query: 1   MATAKLFLA---LFALAVLSLD-LSAVSAAHD---APAPAVDCSSLILNMADCLSFVSND 60
           MAT   F A   LF + +LSL  +S + A+H    APAP+VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            T  KPEG+CC+GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ + 
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIAT 120

Query: 121 CKLSNSPAGPPAIAP---ANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAI 171
           C LS +P+  P +AP   A  P++   +AP        P  G   ++    S  +V+ A+
Sbjct: 121 CGLSVAPSTAPGLAPGVAAAGPETAGFLAP-------NPSSGNDGSSLIPTSFTTVLSAV 173

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BLAST of CmaCh19G002650 vs. Swiss-Prot
Match: NLTL2_ARATH (Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thaliana GN=At2g13820 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 78/160 (48.75%), Postives = 104/160 (65.00%), Query Frame = 1


Query: 11  FALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTV 70
           +A  ++   + A+ +   A A AVDCSSLILNMADCLSFV++ ST  KPEG+CC+GLKTV
Sbjct: 3   YATILMIFSVVALMSGERAHA-AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTV 62

Query: 71  LKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPAIAPAN 130
           ++   +CLC+AFKNS  LG+ L+++KA SLP+ CKV+AP ++ C LS S   PPA AP  
Sbjct: 63  VRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVS-GDPPATAPGL 122

Query: 131 SPKSEA---AIAPAVNEPTAAPGPGKSAATGAMVSIGSVI 168
           SP + A   A++   N  T    P  S A+   VS   VI
Sbjct: 123 SPTAGAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVI 160

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BLAST of CmaCh19G002650 vs. Swiss-Prot
Match: NLTL1_ORYSJ (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LTPL1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12
Identity = 71/188 (37.77%), Postives = 95/188 (50.53%), Query Frame = 1


Query: 1   MATAKLFLALFALAVLSL----DLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTT 60
           MA A    A+  L V+ L     +   +A+  APAPAVDC++  L +ADCL +V+   T 
Sbjct: 1   MAVAARAAAVACLLVVGLAAVAGVDGATASSPAPAPAVDCTAEALKLADCLDYVTPGKTA 60

Query: 61  -TKPEGSCCTGLKTVLK--ADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            ++P   CC  +K  LK  A   CLC AF  S  L + +N+T+AL LPAAC   A A S 
Sbjct: 61  PSRPSKLCCGEVKGALKDSAAVGCLCAAF-TSKTLPLPINITRALHLPAACGADASAFSK 120

Query: 121 CKLSNSPAGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVI---GAI 179
           C    +PA  P++AP  S  S  A         AAP  G +AA   M S  +V+    A+
Sbjct: 121 CL---APAPSPSVAPGTSSGSGGA--------AAAPAKGAAAARSPMASTTAVLVVAAAV 176

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BLAST of CmaCh19G002650 vs. Swiss-Prot
Match: LTPG2_ARATH (Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.1e-07
Identity = 46/140 (32.86%), Postives = 67/140 (47.86%), Query Frame = 1


Query: 30  PAPAVDCSSLILNMADCLSFVS--NDSTTTKPEGSCCTGLKTVLKADADCLCQAFKN--S 89
           P+ A DC + ++NM  CLS+V+        KP+ +CC  L  ++++   CLC       +
Sbjct: 32  PSGAPDCMANLMNMTGCLSYVTVGEGGGAAKPDKTCCPALAGLVESSPQCLCYLLSGDMA 91

Query: 90  AQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPP------AIAPANSPKSEAAIA 149
           AQLG+ ++  KAL LP  C V  P  S C L   P G P        +PA +P S +   
Sbjct: 92  AQLGIKIDKAKALKLPGVCGVITPDPSLCSLFGIPVGAPVAMGDEGASPAYAPGSMSGA- 151

Query: 150 PAVNEPTAAPGPGKSAATGA 160
               E     G G SA+ G+
Sbjct: 152 ----ESPGGFGSGPSASRGS 166

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BLAST of CmaCh19G002650 vs. TrEMBL
Match: A0A0A0K5X6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061200 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.0e-60
Identity = 135/179 (75.42%), Postives = 152/179 (84.92%), Query Frame = 1


Query: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT   FLALF+LA L+L  S +SAA+DAPAP VDCSSLILNMADCLSFVSNDSTT+KP+
Sbjct: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 AGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKS--AATGAMVSIGSVIGAIGVTLLRS 178
           A  PA+ P+ +PKS  A +P V+EPT AP PGKS   ATG + S+GSV+ AIGV LL S
Sbjct: 121 ASSPAVTPSGAPKSAEAASPVVSEPTGAPAPGKSGATATGGLGSVGSVMTAIGVALLCS 179

[Close]

BLAST of CmaCh19G002650 vs. TrEMBL
Match: W9RLU9_9ROSA (Non-specific lipid-transfer protein-like protein OS=Morus notabilis GN=L484_024132 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40
Identity = 106/180 (58.89%), Postives = 134/180 (74.44%), Query Frame = 1


Query: 6   LFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCT 65
           LFL L AL + +    A  A+H APAPAVDCS+LILNMADCLSFVSN ST T PEG+CC 
Sbjct: 11  LFLCLSALVLAN---HAQGASHHAPAPAVDCSNLILNMADCLSFVSNGSTVTTPEGTCCN 70

Query: 66  GLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPA 125
           GLKTVLKADA+CLC+AFK+SAQLGVVLNVTKA++LP ACKVSAP+A+NC LS +P+G PA
Sbjct: 71  GLKTVLKADANCLCEAFKSSAQLGVVLNVTKAMTLPTACKVSAPSAANCGLSITPSGAPA 130

Query: 126 IAPANSPKSEAAIAP-----AVNE--PTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 179
           ++P  S  +  A+AP     A+NE  P +APG G+S ++   +S+ S++  + V  L  F
Sbjct: 131 LSPTESAPASTAVAPASGIGAINEQAPASAPG-GQSGSSVLTISVKSLLVGLVVASLSCF 186

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BLAST of CmaCh19G002650 vs. TrEMBL
Match: M5XFT3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012494mg PE=3 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.4e-38
Identity = 96/159 (60.38%), Postives = 114/159 (71.70%), Query Frame = 1


Query: 24  SAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFK 83
           S+ H APAPAVDCSSLILNMADCLSFVSN ST TKP G+CC+GLKTVLKADA CLC+AFK
Sbjct: 9   SSHHAAPAPAVDCSSLILNMADCLSFVSNGSTDTKPAGTCCSGLKTVLKADAACLCEAFK 68

Query: 84  NSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPAIAPANSPKSEAAIAP--- 143
           +SAQLGVVLN+TKA SLPAACKVSAP+A+NC LS +P   P ++P +SP S  A  P   
Sbjct: 69  SSAQLGVVLNITKAASLPAACKVSAPSATNCGLSITPVAAPGLSPGSSPTSSVAATPESS 128

Query: 144 -AVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 179
              +E   A  PG S +     S+GS++  + V     F
Sbjct: 129 VGGSEQAPASPPGASGSLMLASSVGSLLVGLVVASFPCF 167

[Close]

BLAST of CmaCh19G002650 vs. TrEMBL
Match: A0A0B0NJ15_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_02062 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-36
Identity = 98/168 (58.33%), Postives = 120/168 (71.43%), Query Frame = 1


Query: 4   AKLFLALFALAVLSLDLSAVSAAHDAPAPA----VDCSSLILNMADCLSFVSNDSTTTKP 63
           A  F   F+LA+LS+ L+  +A H A AP+    VDCSSLILNMADCLSFVS+ S T+KP
Sbjct: 3   ASKFCFAFSLAILSI-LAVDAAQHHALAPSPSSPVDCSSLILNMADCLSFVSSGSKTSKP 62

Query: 64  EGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNS 123
           EG+CC+GLKTVLKA   CLC+AFK+SA LGV LNVTKA++LPAACKVSAP+A+ C LS S
Sbjct: 63  EGTCCSGLKTVLKAGPQCLCEAFKSSASLGVTLNVTKAMTLPAACKVSAPSATQCALSLS 122

Query: 124 PAGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVI 168
           P G P IAP+    + AA +   NE   AP PG S +     S+GS+I
Sbjct: 123 PTGAPGIAPSAIAGAPAAFSGGANEAAPAPSPGNSGSQVVSASMGSLI 169

[Close]

BLAST of CmaCh19G002650 vs. TrEMBL
Match: A0A059ASU7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02679 PE=3 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.7e-36
Identity = 101/181 (55.80%), Postives = 124/181 (68.51%), Query Frame = 1


Query: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           M   K+ L LFALA   +  SA   +  AP P VDCS+L+LNMADCLSFVSN STT KPE
Sbjct: 1   MEATKICLLLFALAAC-VAASAHGVSSGAPPPGVDCSTLVLNMADCLSFVSNGSTTEKPE 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADA+C+C+AFK+SAQLGVVLNVTKALSLPAACKVSA +A+ C LS SP
Sbjct: 61  GTCCSGLKTVLKADAECICEAFKSSAQLGVVLNVTKALSLPAACKVSASSATKCALSISP 120

Query: 121 AGPPAIAPAN----SPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLR 178
              PA+ P++    +  + AA    +NE    P PG  +A  ++    S   A GV +L 
Sbjct: 121 TSAPALPPSSATIPTATAPAATTDGLNEQAPTPAPGGDSAASSL----SNPSAFGVAVLA 176

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BLAST of CmaCh19G002650 vs. TAIR10
Match: AT5G64080.1 (AT5G64080.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 137.5 bits (345), Expect = 8.0e-33
Identity = 90/180 (50.00%), Postives = 119/180 (66.11%), Query Frame = 1


Query: 1   MATAKLFLA---LFALAVLSLD-LSAVSAAHD---APAPAVDCSSLILNMADCLSFVSND 60
           MAT   F A   LF + +LSL  +S + A+H    APAP+VDCS+LILNMADCLSFVS+ 
Sbjct: 1   MATHSSFTATTPLFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSG 60

Query: 61  STTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASN 120
            T  KPEG+CC+GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ + 
Sbjct: 61  GTVAKPEGTCCSGLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIAT 120

Query: 121 CKLSNSPAGPPAIAP---ANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAI 171
           C LS +P+  P +AP   A  P++   +AP        P  G   ++    S  +V+ A+
Sbjct: 121 CGLSVAPSTAPGLAPGVAAAGPETAGFLAP-------NPSSGNDGSSLIPTSFTTVLSAV 173

[Close]

BLAST of CmaCh19G002650 vs. TAIR10
Match: AT2G13820.1 (AT2G13820.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 120.9 bits (302), Expect = 7.8e-28
Identity = 78/160 (48.75%), Postives = 104/160 (65.00%), Query Frame = 1


Query: 11  FALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTV 70
           +A  ++   + A+ +   A A AVDCSSLILNMADCLSFV++ ST  KPEG+CC+GLKTV
Sbjct: 3   YATILMIFSVVALMSGERAHA-AVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTV 62

Query: 71  LKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPAIAPAN 130
           ++   +CLC+AFKNS  LG+ L+++KA SLP+ CKV+AP ++ C LS S   PPA AP  
Sbjct: 63  VRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVS-GDPPATAPGL 122

Query: 131 SPKSEA---AIAPAVNEPTAAPGPGKSAATGAMVSIGSVI 168
           SP + A   A++   N  T    P  S A+   VS   VI
Sbjct: 123 SPTAGAGAPALSSGANAATPVSSPRSSDASLLSVSFAFVI 160

[Close]

BLAST of CmaCh19G002650 vs. TAIR10
Match: AT1G36150.1 (AT1G36150.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 1


Query: 30  PAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLG 89
           P+ + DCSS+I +M DCLSF++  ST   P  +CC G+KTVL     CLC A ++S ++G
Sbjct: 39  PSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMG 98

Query: 90  VVLNVTKALSLPAACKVSAPAASNCKLS----NSPAGPPAIAPANSPKSEAAIAPAVNEP 149
            VL+ TKAL++P  C V  P   NC +S    ++P  PP  +P  SP S  + A   + P
Sbjct: 99  FVLDDTKALAMPKICNV--PIDPNCDVSTPAASTPVSPPVESPTTSPSSAKSPAITPSSP 158

Query: 150 TAAPGP 152
             +  P
Sbjct: 159 AVSHSP 162

[Close]

BLAST of CmaCh19G002650 vs. TAIR10
Match: AT4G08670.1 (AT4G08670.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17
Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 1


Query: 29  APAP---AVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNS 88
           APAP   + DCS++I +M DCL ++   S  TKPE SCCTG++TVL+ +  C+C    ++
Sbjct: 38  APAPGPSSSDCSTVIYSMMDCLGYLGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSA 97

Query: 89  AQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPAIAPANSPKSEAAIAPAVNEP 148
            ++G+ LN T+AL+ P ACK+S  A  +C +  S A  P  +P         ++P+   P
Sbjct: 98  GEMGIELNSTRALATPKACKLSI-APPHCGIITSGATTPGASP---------VSPSAGAP 157

Query: 149 TAAPGPGKSAATGA 160
           T +P   KS  T A
Sbjct: 158 TTSPSAAKSPETSA 161

[Close]

BLAST of CmaCh19G002650 vs. TAIR10
Match: AT5G09370.1 (AT5G09370.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-13
Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 1


Query: 8   LALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGL 67
           +A F+ A  SL L  +S +      A DC +L++ +  CL F+S   T   P  SCC+ L
Sbjct: 1   MAYFSTAT-SLLLLVLSVSSPYVHGASDCDTLVITLFPCLPFISIGGTADTPTASCCSSL 60

Query: 68  KTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPAI- 127
           K +L     CLC+  K  A LG+ LNVTK+ +LP ACK++AP  S C  S  PA PP   
Sbjct: 61  KNILDTKPICLCEGLK-KAPLGIKLNVTKSATLPVACKLNAPPVSACD-SLPPASPPTAN 120

Query: 128 ----------APANSPKSEAAIAP 141
                     APA SP    ++ P
Sbjct: 121 GQAPVWGSGWAPAPSPSKGNSLIP 141

[Close]

BLAST of CmaCh19G002650 vs. NCBI nr
Match: gi|659110437|ref|XP_008455223.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis melo])

HSP 1 Score: 251.5 bits (641), Expect = 1.1e-63
Identity = 137/177 (77.40%), Postives = 155/177 (87.57%), Query Frame = 1


Query: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT  LFLA+F+L+ L+L  S +SAA+DAPAPAVDCSSLILNMADCLSFVSNDSTTTKP+
Sbjct: 1   MATTNLFLAIFSLSFLALHFSPLSAANDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 AGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRS 178
           A  PA+ P+ +PKS  A +P +NEPT AP PGKS ATGA+ S+GSV+ AIGV LL S
Sbjct: 121 ASSPAVTPSATPKSAEAASPVMNEPTGAPAPGKSGATGALASVGSVMAAIGVALLCS 177

[Close]

BLAST of CmaCh19G002650 vs. NCBI nr
Match: gi|449438175|ref|XP_004136865.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 4.2e-60
Identity = 135/179 (75.42%), Postives = 152/179 (84.92%), Query Frame = 1


Query: 1   MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
           MAT   FLALF+LA L+L  S +SAA+DAPAP VDCSSLILNMADCLSFVSNDSTT+KP+
Sbjct: 1   MATTNPFLALFSLAFLALQFSPLSAANDAPAPGVDCSSLILNMADCLSFVSNDSTTSKPQ 60

Query: 61  GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
           G+CC+GLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLS SP
Sbjct: 61  GTCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSISP 120

Query: 121 AGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKS--AATGAMVSIGSVIGAIGVTLLRS 178
           A  PA+ P+ +PKS  A +P V+EPT AP PGKS   ATG + S+GSV+ AIGV LL S
Sbjct: 121 ASSPAVTPSGAPKSAEAASPVVSEPTGAPAPGKSGATATGGLGSVGSVMTAIGVALLCS 179

[Close]

BLAST of CmaCh19G002650 vs. NCBI nr
Match: gi|703127431|ref|XP_010103830.1| (Non-specific lipid-transfer protein-like protein [Morus notabilis])

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-40
Identity = 106/180 (58.89%), Postives = 134/180 (74.44%), Query Frame = 1


Query: 6   LFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCT 65
           LFL L AL + +    A  A+H APAPAVDCS+LILNMADCLSFVSN ST T PEG+CC 
Sbjct: 11  LFLCLSALVLAN---HAQGASHHAPAPAVDCSNLILNMADCLSFVSNGSTVTTPEGTCCN 70

Query: 66  GLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPA 125
           GLKTVLKADA+CLC+AFK+SAQLGVVLNVTKA++LP ACKVSAP+A+NC LS +P+G PA
Sbjct: 71  GLKTVLKADANCLCEAFKSSAQLGVVLNVTKAMTLPTACKVSAPSAANCGLSITPSGAPA 130

Query: 126 IAPANSPKSEAAIAP-----AVNE--PTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 179
           ++P  S  +  A+AP     A+NE  P +APG G+S ++   +S+ S++  + V  L  F
Sbjct: 131 LSPTESAPASTAVAPASGIGAINEQAPASAPG-GQSGSSVLTISVKSLLVGLVVASLSCF 186

[Close]

BLAST of CmaCh19G002650 vs. NCBI nr
Match: gi|645224006|ref|XP_008218904.1| (PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Prunus mume])

HSP 1 Score: 165.6 bits (418), Expect = 7.8e-38
Identity = 103/183 (56.28%), Postives = 126/183 (68.85%), Query Frame = 1


Query: 1   MATAKLFLALFALAV-LSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKP 60
           M   +++  L  +AV L+      S+ H APAPAVDCS+LILNMADCLSFVSN ST TKP
Sbjct: 1   MGAMRVWSVLVVMAVALATFGECGSSHHAAPAPAVDCSTLILNMADCLSFVSNGSTDTKP 60

Query: 61  EGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNS 120
            G+CC+GLKTVLKADA CLC+AFK+SAQLGVVLN+TKA SLPAACKVSAP+A+NC LS +
Sbjct: 61  AGTCCSGLKTVLKADAACLCEAFKSSAQLGVVLNITKAASLPAACKVSAPSATNCGLSIT 120

Query: 121 PAGPPAIAPANSPKSEAAIAP----AVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLL 179
           PAG P ++P +SP S  A  P      NE   A  PG S +     S+GS++  + V   
Sbjct: 121 PAGAPGLSPGSSPTSSVAATPESSAGGNEQAPASPPGASGSLMLASSVGSLLVGLVVASF 180

[Close]

BLAST of CmaCh19G002650 vs. NCBI nr
Match: gi|596197351|ref|XP_007223600.1| (hypothetical protein PRUPE_ppa012494mg [Prunus persica])

HSP 1 Score: 165.6 bits (418), Expect = 7.8e-38
Identity = 96/159 (60.38%), Postives = 114/159 (71.70%), Query Frame = 1


Query: 24  SAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFK 83
           S+ H APAPAVDCSSLILNMADCLSFVSN ST TKP G+CC+GLKTVLKADA CLC+AFK
Sbjct: 9   SSHHAAPAPAVDCSSLILNMADCLSFVSNGSTDTKPAGTCCSGLKTVLKADAACLCEAFK 68

Query: 84  NSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSPAGPPAIAPANSPKSEAAIAP--- 143
           +SAQLGVVLN+TKA SLPAACKVSAP+A+NC LS +P   P ++P +SP S  A  P   
Sbjct: 69  SSAQLGVVLNITKAASLPAACKVSAPSATNCGLSITPVAAPGLSPGSSPTSSVAATPESS 128

Query: 144 -AVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 179
              +E   A  PG S +     S+GS++  + V     F
Sbjct: 129 VGGSEQAPASPPGASGSLMLASSVGSLLVGLVVASFPCF 167

The following BLAST results are available for this feature:

BLAST of CmaCh19G002650 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NLTL5_ARATH	1.4e-31	50.00	Non-specific lipid-transfer protein-like protein At5g64080 OS=Arabidopsis thalia...	[more]
NLTL2_ARATH	1.4e-26	48.75	Non-specific lipid-transfer protein-like protein At2g13820 OS=Arabidopsis thalia...	[more]
NLTL1_ORYSJ	3.3e-12	37.77	Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica GN=LT...	[more]
LTPG2_ARATH	1.1e-07	32.86	Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LT...	[more]

BLAST of CmaCh19G002650 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5X6_CUCSA	3.0e-60	75.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G061200 PE=3 SV=1	[more]
W9RLU9_9ROSA	1.2e-40	58.89	Non-specific lipid-transfer protein-like protein OS=Morus notabilis GN=L484_0241...	[more]
M5XFT3_PRUPE	5.4e-38	60.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012494mg PE=3 SV=1	[more]
A0A0B0NJ15_GOSAR	1.7e-36	58.33	Uncharacterized protein OS=Gossypium arboreum GN=F383_02062 PE=3 SV=1	[more]
A0A059ASU7_EUCGR	1.7e-36	55.80	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02679 PE=3 SV=1	[more]

BLAST of CmaCh19G002650 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64080.1	8.0e-33	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT2G13820.1	7.8e-28	48.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G36150.1	3.6e-17	40.48	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G08670.1	3.6e-17	38.81	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT5G09370.1	4.1e-13	38.19	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of CmaCh19G002650 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110437\|ref\|XP_008455223.1\|	1.1e-63	77.40	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis m...	[more]
gi\|449438175\|ref\|XP_004136865.1\|	4.2e-60	75.42	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Cucumis s...	[more]
gi\|703127431\|ref\|XP_010103830.1\|	1.7e-40	58.89	Non-specific lipid-transfer protein-like protein [Morus notabilis]	[more]
gi\|645224006\|ref\|XP_008218904.1\|	7.8e-38	56.28	PREDICTED: non-specific lipid-transfer protein-like protein At5g64080 [Prunus mu...	[more]
gi\|596197351\|ref\|XP_007223600.1\|	7.8e-38	60.38	hypothetical protein PRUPE_ppa012494mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000528	Plant_LTP
IPR016140	Bifunc_inhib/LTP/seed_store

Vocabulary: **Biological Process**
Term	Definition
GO:0006869	lipid transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008289	lipid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008289	lipid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G002650.1	CmaCh19G002650.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 58..72 score: 2.4E-6coord: 35..51 score: 2.4E-6coord: 91..108 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 22..114 score: 1.3
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 36..114 score: 2.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 33..116 score: 2.36
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 34..116 score: 2.9
None	No IPR available	PANTHER	PTHR33044	FAMILY NOT NAMED	coord: 6..175 score: 3.7
None	No IPR available	PANTHER	PTHR33044:SF27	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 6..175 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G002650	Cucsa.217810	Cucumber (Gy14) v1	cgycmaB0625
CmaCh19G002650	Cla006403	Watermelon (97103) v1	cmawmB479
CmaCh19G002650	Csa7G061200	Cucumber (Chinese Long) v2	cmacuB532
CmaCh19G002650	MELO3C018657	Melon (DHL92) v3.5.1	cmameB455
CmaCh19G002650	ClCG09G015260	Watermelon (Charleston Gray)	cmawcgB444
CmaCh19G002650	CSPI07G05410	Wild cucumber (PI 183967)	cmacpiB538
CmaCh19G002650	CmoCh19G002860	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G002650	Lsi03G007750	Bottle gourd (USVL1VR-Ls)	cmalsiB482
CmaCh19G002650	Cp4.1LG15g02290	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G002650	Cp4.1LG04g07000	Cucurbita pepo (Zucchini)	cmacpeB538
CmaCh19G002650	MELO3C018657.2	Melon (DHL92) v3.6.1	cmamedB528
CmaCh19G002650	CsaV3_7G006350	Cucumber (Chinese Long) v3	cmacucB0642
CmaCh19G002650	Cla97C09G177280	Watermelon (97103) v2	cmawmbB552
CmaCh19G002650	Bhi05G000682	Wax gourd	cmawgoB0655
CmaCh19G002650	CsGy7G005010	Cucumber (Gy14) v2	cgybcmaB949
CmaCh19G002650	Carg23982	Silver-seed gourd	carcmaB1029
CmaCh19G002650	Carg24568	Silver-seed gourd	carcmaB0916

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G002650	CmaCh11G016400	Cucurbita maxima (Rimu)	cmacmaB153

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G002650	Cucurbita moschata (Rifu)	cmacmoB493