CsGy6G027480 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCACTACAGGTGTGTGTGTTTTTTTAGTGGGGTTTTCACTAATGTATAGCATAGAGACATCAGATTATTAAAAAAGAAAAATAGAGTAACAAAGATAAAGAGTATTTAAAAAGAAAAGTTTGTTAAAAAAAGTGTCTAAAATTATAGATTATAAAGAGGGAGATTATTCAGGGAGTCTGTAAAAGTGTGTATGTGTATTGGAGGGAAAAAGTGTCAAAAGATTGAATAATTTTCAAACATTTTATGAAAAAAAAAAGAAACTTATTTAATATTAAATCTAAAAGTACTTTTCAGCATGTTCATTTCCCAAACTACTACTAACTTTTCCAAAATATTAAAATTGAAACCATTTTGATACTGTTTTTTTTCACCTAACACCGAATTTAATTTAAAAAAAAAAAAAAAAAAACTGTCTTTCACGCACTTCTACATTATTGTAATAAGACATAAGTAGAGAAATACCTTTAAACTATTTTAAAGCGCAAAGAAAAATCAATTTATTCTTTAAATTTTTGGAGTTGTAATTAGGGACTTATAAAGCATACCCCCAAATGTATATGACTTGGAAATAATACATGGGGTTCACTGCCTTAATCTTGGATTCAAAGATCAATTGATTGGGTAATGGGGAATGGGGAGTGGGGAATGGGGAGTGGGGAATGGGGAATGGGGATGGGCCAAAAATTAATCTCAATAAAGCAAGTAGAACAAAGATATATATATATACACACACAAGGCCCACTAGTGAGAATAGGGTATTATCAAACTCATGAGCCACTTTGCTTTAGCATATTTAGTTTTGTTGTGACAACAATAATTACAATCAGAATATTGTTCTAACATTAGTCTTCATGCATCATTGGTCAATCTCGATGTCCACTATTATTCTTGCTAAAATGTTCATAGTTTAATCGAGATAAGACATAAAGTCTTACTAAACAATTAGAATGGTTCAAATTCCATCACTTTCCGATTGTAGTACTAAAAAAATATATATTATTCTTTATATACACTAAAAAGTATATGAAACTTCATTTTCACTCGAATGAATGAAAATTTTATAAAATATCTAACTAGCGTGTTTAGATTGACAAGAACAAAATGTTCTTTTAAAAATTTTATTTTTATATATTTAATTTTTTAAGAATATAAAAATGCTTAAAATATAGGGACATTTTTTAAAATACCAAAATAAATTAAAATATTTACAATCTATATTAAAAGTTTGGATTATATCACGGATAGTCTTCTATCACTGTAGCATGTGAGTGACTATCCATTATAAAATTTGATATAGATCGTAAATATTTTGTAAAATCCACCGTTTTTTAAAATTCTCTTAAAACAAATATTTAGAAACTATTTCTGTAGCTATAAAAACTTCAAAAAGAAAAAATCCTAAAATGATCTATTGTTAAATAAACACTTGAATAATTAAGTCACTCATATTTATTTTTGTCATACCTATAATTTTAATTCTTCCCCTATACGAAATTTCGGGTACAACCATGGAATCACGAGCAATATTTGGGTGCAAACTTCCCATGCCTCCCTTCCTCTACTTACACAAAAATTAATAATAAATAATTTATTCCTAAACATTTTTATTGTAAAGAACTTTTAATTAAGTGTAACAGTGGTTTTACCGATCACATAATTGGATACTTTTGAAGAAATATTAGGGCCTTCAACTAATATAACTATATATAAATTACTAAGTAGTTGGCATTCATGTCACTTTTCTTTTAACATTCTTCATTGCAATAGTTAGAGTTTTCGGTTTTATTCAAAATGACTAGATGACGGTGGATAAGTGTTAGATAATTTTTTAGAACTTAGTTTATGTTAGTTTAGTTGTTAATTTAGTTTAATCAATATTTTAGTTTTATTATTAGCTGATTATCATATTTTCTTATAGACCTATGGCTAACAATTTTAAAGTTGCAATGAGAAAATTTTGAAATCATATATGAAAAAAGAACAATTTGTTGGAGAGTTCTCTCTCAACCTTAGACTGATCTAAACTTCATATATAATTGATTGTAGAATTGAACTAAACCTCAAACATATTAATTACATCACAAGACATCTAAGTACCAAATTCTTTAATTAATTTCGAGTGGACTTGTTTGCATTGTGTCTCATGGTTTTATTCAAATTCACACACATTACTATTAATAATCTTCCTTCACTGACATTACATTTACATTCTTTCAAATTAACAATAATCAAAACTTTGATAGGTACAAATACTGAAAATCTATGTTGAAAATATTAAAGAACTTCAAATCTTTATAGGTGAAAGCGTTTAAATATAAAAGAGCTAATCCTCTAAGGGTCAATAATAATTACTTAATTAGTAGTATTGAATAATAGGTATGATTTCCAAATTATCATATATATTAAATGAAAAATTCTCTCTTTTATGAGAATCCAAAAGTCAAAGTTTAGACCTTTCGATTCAATAAACCCCATTAGCAATTCTAATTACCTTTTTTAAAGAAAAAAAAAATCAATTGGGAGCCTAAAAAGGGGCCTCCACTGCTTTGGTGGGCTGACAATAACCCGTAATAACCTTCAACTCTCCACCTATAAATAACCCTTTAGTTTATGCTGCTTTTGCATATACTCTCTCTTAACTCCTTCTGAGATTTCATCTATTACACATAACTTAGCCTTATGTTCAAAACTATGGCCCCAACCAAGCTAAGCTTTGCCTTTCTTTTCATTTCCCTTTTAATTTTGTGTCATCTTGTAGATCCTGCATTCAGCAGGCCACTGACAACCCATACAATTCACCAACAACTCTCTGACACCCTTCCAAAAAACCCCCATTTCCAACTCCATGGTCAAACTCTGCATGAAGGAAAAGCCTCAAACGACGATGCTGTTTCTACTCCAAACCCGAACCCTCCCTCAGCAGCTGCAAGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA ATGTGCACTACAGATCCTGCATTCAGCAGGCCACTGACAACCCATACAATTCACCAACAACTCTCTGACACCCTTCCAAAAAACCCCCATTTCCAACTCCATGGTCAAACTCTGCATGAAGGAAAAGCCTCAAACGACGATGCTGTTTCTACTCCAAACCCGAACCCTCCCTCAGCAGCTGCAAGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA ATGTGCACTACAGATCCTGCATTCAGCAGGCCACTGACAACCCATACAATTCACCAACAACTCTCTGACACCCTTCCAAAAAACCCCCATTTCCAACTCCATGGTCAAACTCTGCATGAAGGAAAAGCCTCAAACGACGATGCTGTTTCTACTCCAAACCCGAACCCTCCCTCAGCAGCTGCAAGTTCGACTCCAGGCCGGAAGATGGACGACTTCAGGCCAACCACCCCTGGCCATAGCCCTGGCGTTGGTCATTCCATTGAGAACTAA MCTTDPAFSRPLTTHTIHQQLSDTLPKNPHFQLHGQTLHEGKASNDDAVSTPNPNPPSAAASSTPGRKMDDFRPTTPGHSPGVGHSIEN
BLAST of CsGy6G027480 vs. NCBI nr
Match: KGN48516.1 (hypothetical protein Csa_6G490800 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 1.1e-41 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy6G027480 vs. NCBI nr
Match: OMO56709.1 (hypothetical protein CCACVL1_26342 [Corchorus capsularis]) HSP 1 Score: 57.4 bits (137), Expect = 2.9e-05 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of CsGy6G027480 vs. NCBI nr
Match: KOM45038.1 (hypothetical protein LR48_Vigan06g034400 [Vigna angularis] >BAU00198.1 hypothetical protein VIGAN_10176900 [Vigna angularis var. angularis]) HSP 1 Score: 57.0 bits (136), Expect = 3.8e-05 Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of CsGy6G027480 vs. NCBI nr
Match: POE82592.1 (hypothetical protein CFP56_46441 [Quercus suber]) HSP 1 Score: 56.6 bits (135), Expect = 5.0e-05 Identity = 30/59 (50.85%), Postives = 35/59 (59.32%), Query Frame = 0
BLAST of CsGy6G027480 vs. NCBI nr
Match: OMP02048.1 (hypothetical protein COLO4_11388 [Corchorus olitorius]) HSP 1 Score: 56.2 bits (134), Expect = 6.5e-05 Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of CsGy6G027480 vs. TAIR10
Match: AT2G23440.1 (unknown protein) HSP 1 Score: 45.4 bits (106), Expect = 2.1e-05 Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 0
BLAST of CsGy6G027480 vs. TAIR10
Match: AT5G66815.1 (unknown protein) HSP 1 Score: 41.2 bits (95), Expect = 3.9e-04 Identity = 15/20 (75.00%), Postives = 19/20 (95.00%), Query Frame = 0
BLAST of CsGy6G027480 vs. Swiss-Prot
Match: sp|O80460|PCEP3_ARATH (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 3.7e-04 Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 0
BLAST of CsGy6G027480 vs. TrEMBL
Match: tr|A0A0A0KLC0|A0A0A0KLC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490800 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 7.5e-42 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy6G027480 vs. TrEMBL
Match: tr|A0A2N9HI50|A0A2N9HI50_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39764 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 6.6e-06 Identity = 31/59 (52.54%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of CsGy6G027480 vs. TrEMBL
Match: tr|A0A1R3GF58|A0A1R3GF58_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_26342 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.9e-05 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
BLAST of CsGy6G027480 vs. TrEMBL
Match: tr|A0A2N9H8T0|A0A2N9H8T0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35942 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.5e-05 Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of CsGy6G027480 vs. TrEMBL
Match: tr|A0A0L9UQM6|A0A0L9UQM6_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan06g034400 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.5e-05 Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |